![](files/infoQ.gif)
thylakoid lumenal 17.4 kDa protein, chloroplastic [Oryza sativa Japonica Group]
pentapeptide repeat-containing protein( domain architecture ID 11442852)
pentapeptide repeat-containing protein (PRP) adopts a beta-helical structure and may have a targeting or structural function
List of domain hits
![](files/help.png)
Name | Accession | Description | Interval | E-value | |||
YjbI | COG1357 | Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
134-219 | 2.56e-11 | |||
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; : Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 60.34 E-value: 2.56e-11
|
|||||||
Name | Accession | Description | Interval | E-value | |||
YjbI | COG1357 | Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
134-219 | 2.56e-11 | |||
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 60.34 E-value: 2.56e-11
|
|||||||
Pentapeptide | pfam00805 | Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ... |
144-188 | 5.06e-06 | |||
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid. Pssm-ID: 459943 [Multi-domain] Cd Length: 40 Bit Score: 42.33 E-value: 5.06e-06
|
|||||||
PRK15196 | PRK15196 | type III secretion system effector PipB2; |
112-201 | 1.33e-05 | |||
type III secretion system effector PipB2; Pssm-ID: 185118 [Multi-domain] Cd Length: 350 Bit Score: 45.38 E-value: 1.33e-05
|
|||||||
Name | Accession | Description | Interval | E-value | |||
YjbI | COG1357 | Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
134-219 | 2.56e-11 | |||
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 60.34 E-value: 2.56e-11
|
|||||||
YjbI | COG1357 | Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
125-209 | 1.36e-10 | |||
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 58.41 E-value: 1.36e-10
|
|||||||
YjbI | COG1357 | Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
113-217 | 4.31e-09 | |||
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 54.18 E-value: 4.31e-09
|
|||||||
Pentapeptide | pfam00805 | Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ... |
144-188 | 5.06e-06 | |||
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid. Pssm-ID: 459943 [Multi-domain] Cd Length: 40 Bit Score: 42.33 E-value: 5.06e-06
|
|||||||
PRK15196 | PRK15196 | type III secretion system effector PipB2; |
112-201 | 1.33e-05 | |||
type III secretion system effector PipB2; Pssm-ID: 185118 [Multi-domain] Cd Length: 350 Bit Score: 45.38 E-value: 1.33e-05
|
|||||||
Pentapeptide_4 | pfam13599 | Pentapeptide repeats (9 copies); |
159-217 | 2.24e-05 | |||
Pentapeptide repeats (9 copies); Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 41.49 E-value: 2.24e-05
|
|||||||
Pentapeptide | pfam00805 | Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ... |
159-198 | 2.57e-05 | |||
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid. Pssm-ID: 459943 [Multi-domain] Cd Length: 40 Bit Score: 40.40 E-value: 2.57e-05
|
|||||||
Pentapeptide | pfam00805 | Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ... |
173-208 | 8.80e-05 | |||
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid. Pssm-ID: 459943 [Multi-domain] Cd Length: 40 Bit Score: 38.86 E-value: 8.80e-05
|
|||||||
Pentapeptide_4 | pfam13599 | Pentapeptide repeats (9 copies); |
139-206 | 1.08e-04 | |||
Pentapeptide repeats (9 copies); Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 39.56 E-value: 1.08e-04
|
|||||||
Pentapeptide | pfam00805 | Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ... |
158-193 | 1.33e-04 | |||
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid. Pssm-ID: 459943 [Multi-domain] Cd Length: 40 Bit Score: 38.09 E-value: 1.33e-04
|
|||||||
YjbI | COG1357 | Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
145-218 | 2.01e-04 | |||
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 40.69 E-value: 2.01e-04
|
|||||||
Pentapeptide_4 | pfam13599 | Pentapeptide repeats (9 copies); |
158-209 | 2.39e-04 | |||
Pentapeptide repeats (9 copies); Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 38.79 E-value: 2.39e-04
|
|||||||
PRK15196 | PRK15196 | type III secretion system effector PipB2; |
125-209 | 2.89e-04 | |||
type III secretion system effector PipB2; Pssm-ID: 185118 [Multi-domain] Cd Length: 350 Bit Score: 41.15 E-value: 2.89e-04
|
|||||||
PRK15196 | PRK15196 | type III secretion system effector PipB2; |
98-224 | 3.11e-04 | |||
type III secretion system effector PipB2; Pssm-ID: 185118 [Multi-domain] Cd Length: 350 Bit Score: 41.15 E-value: 3.11e-04
|
|||||||
Pentapeptide_4 | pfam13599 | Pentapeptide repeats (9 copies); |
136-216 | 3.87e-04 | |||
Pentapeptide repeats (9 copies); Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 38.02 E-value: 3.87e-04
|
|||||||
Pentapeptide_4 | pfam13599 | Pentapeptide repeats (9 copies); |
117-196 | 1.62e-03 | |||
Pentapeptide repeats (9 copies); Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 36.48 E-value: 1.62e-03
|
|||||||
PRK15196 | PRK15196 | type III secretion system effector PipB2; |
126-201 | 1.94e-03 | |||
type III secretion system effector PipB2; Pssm-ID: 185118 [Multi-domain] Cd Length: 350 Bit Score: 38.83 E-value: 1.94e-03
|
|||||||
PRK15196 | PRK15196 | type III secretion system effector PipB2; |
122-211 | 2.50e-03 | |||
type III secretion system effector PipB2; Pssm-ID: 185118 [Multi-domain] Cd Length: 350 Bit Score: 38.45 E-value: 2.50e-03
|
|||||||
Pentapeptide | pfam00805 | Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ... |
130-168 | 9.03e-03 | |||
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid. Pssm-ID: 459943 [Multi-domain] Cd Length: 40 Bit Score: 33.08 E-value: 9.03e-03
|
|||||||
Blast search parameters | ||||
|