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Conserved domains on  [gi|1002300968|ref|XP_015613917|]
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proline-rich protein 4 [Oryza sativa Japonica Group]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 168-284 3.08e-06

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 48.78  E-value: 3.08e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968  168 PMPEYQPPPSPVYGTPAPGCSCSPPSTPPGYGQPAPECPPADPGYGQPAPECPPPPTPAPECGQPAPEyPPSTPAYGTPA 247
Cdd:PHA03247  2733 PALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPS-PWDPADPPAAV 2811

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1002300968  248 PECPPSTPEYGTPATACPPPTAPGYGSPSPFWPPVSP 284
Cdd:PHA03247  2812 LAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPP 2848
Pollen_Ole_e_1 super family cl03128
Pollen protein Ole e 1 like;
32-110 1.94e-05

Pollen protein Ole e 1 like;


The actual alignment was detected with superfamily member pfam01190:

Pssm-ID: 460103 [Multi-domain]  Cd Length: 94  Bit Score: 42.72  E-value: 1.94e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968  32 VVGAAKCAGC--GRKNMDAETAFKGLKVAIKCKNGSS---EEYESKAVGELDGAGAFAVPL-----AADLRGADCVAQLH 101
Cdd:pfam01190   1 VEGLVYCDSCsrGSFSLKGAKPLPGAKVRVTCKNGKDgtkGEVTSYASGTTDKNGYFKVELpgfdeKDDLKIKECKAKLV 80


                  ....*....
gi 1002300968 102 SAAtDAPCP 110
Cdd:pfam01190  81 SSP-DPTCN 88
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 168-284 3.08e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 48.78  E-value: 3.08e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968  168 PMPEYQPPPSPVYGTPAPGCSCSPPSTPPGYGQPAPECPPADPGYGQPAPECPPPPTPAPECGQPAPEyPPSTPAYGTPA 247
Cdd:PHA03247  2733 PALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPS-PWDPADPPAAV 2811

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1002300968  248 PECPPSTPEYGTPATACPPPTAPGYGSPSPFWPPVSP 284
Cdd:PHA03247  2812 LAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPP 2848
Pollen_Ole_e_1 pfam01190
Pollen protein Ole e 1 like;
32-110 1.94e-05

Pollen protein Ole e 1 like;


Pssm-ID: 460103 [Multi-domain]  Cd Length: 94  Bit Score: 42.72  E-value: 1.94e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968  32 VVGAAKCAGC--GRKNMDAETAFKGLKVAIKCKNGSS---EEYESKAVGELDGAGAFAVPL-----AADLRGADCVAQLH 101
Cdd:pfam01190   1 VEGLVYCDSCsrGSFSLKGAKPLPGAKVRVTCKNGKDgtkGEVTSYASGTTDKNGYFKVELpgfdeKDDLKIKECKAKLV 80


                  ....*....
gi 1002300968 102 SAAtDAPCP 110
Cdd:pfam01190  81 SSP-DPTCN 88
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 168-284 3.08e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 48.78  E-value: 3.08e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968  168 PMPEYQPPPSPVYGTPAPGCSCSPPSTPPGYGQPAPECPPADPGYGQPAPECPPPPTPAPECGQPAPEyPPSTPAYGTPA 247
Cdd:PHA03247  2733 PALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPS-PWDPADPPAAV 2811

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1002300968  248 PECPPSTPEYGTPATACPPPTAPGYGSPSPFWPPVSP 284
Cdd:PHA03247  2812 LAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPP 2848
Pollen_Ole_e_1 pfam01190
Pollen protein Ole e 1 like;
32-110 1.94e-05

Pollen protein Ole e 1 like;


Pssm-ID: 460103 [Multi-domain]  Cd Length: 94  Bit Score: 42.72  E-value: 1.94e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968  32 VVGAAKCAGC--GRKNMDAETAFKGLKVAIKCKNGSS---EEYESKAVGELDGAGAFAVPL-----AADLRGADCVAQLH 101
Cdd:pfam01190   1 VEGLVYCDSCsrGSFSLKGAKPLPGAKVRVTCKNGKDgtkGEVTSYASGTTDKNGYFKVELpgfdeKDDLKIKECKAKLV 80


                  ....*....
gi 1002300968 102 SAAtDAPCP 110
Cdd:pfam01190  81 SSP-DPTCN 88
PHA03247 PHA03247
large tegument protein UL36; Provisional
 164-300 2.40e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.08  E-value: 2.40e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968  164 FHRKPMPEYQPPPSPVYGTPA----PGCSCSPPSTPPGYGQPAPECPPADPGYGQPAPECPPPPTPAPECGQPAPEYPPS 239
Cdd:PHA03247  2698 LADPPPPPPTPEPAPHALVSAtplpPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAA 2777

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1002300968  240 TPAYGTPAP---------ECPPSTPEYGTPATACPPPTA--PGYGSPSPFWPPVSPAYGTPSPTPIYRPPGS 300
Cdd:PHA03247  2778 GPPRRLTRPavaslsesrESLPSPWDPADPPAAVLAPAAalPPAASPAGPLPPPTSAQPTAPPPPPGPPPPS 2849
PHA03247 PHA03247
large tegument protein UL36; Provisional
 168-299 2.86e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.70  E-value: 2.86e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968  168 PMPEYQPPPSPVYGTPAPGCSCSPPSTPPGyGQPAPECPPADPGYGQPAPECPPPPTPAPECGQPAPEYPPSTPAYGTPA 247
Cdd:PHA03247  2824 PAGPLPPPTSAQPTAPPPPPGPPPPSLPLG-GSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPP 2902

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1002300968  248 PE-CPPSTPEYGTPATACPPPTAPGYGSPSPFWP--PVSPAYGTPSPTPIYRPPG 299
Cdd:PHA03247  2903 DQpERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPprPQPPLAPTTDPAGAGEPSG 2957
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
177-298 1.30e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 43.33  E-value: 1.30e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 177 SPVYGTPAPGCSCSPPSTPPGYGQPAPECPPADPGYGQPAPECPPPPTPAPECGQPAPEYPP----STPAYGTPAPECPP 252
Cdd:PRK12323  373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAaarqASARGPGGAPAPAP 452

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1002300968 253 STPEYGTPATACPPPTAPGYGSPSPFWPPVSPAYGTPSPTPIYRPP 298
Cdd:PRK12323  453 APAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPP 498
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 172-301 1.58e-04

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 43.15  E-value: 1.58e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968  172 YQPPPSPVYGTPAPGCSCSPPSTP-------PGYGQPAPECPPADPGYGQPAPECPPPPTPAPECGQPAPEYPPstpaYG 244
Cdd:PRK10263   333 WAAPVEPVTQTPPVASVDVPPAQPtvawqpvPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQP----YY 408

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1002300968  245 TPAPECPPSTPEYgtpATACPPPTAPGYGSPSPFWPPVSPAYGTPSPTPIYRPPGSH 301
Cdd:PRK10263   409 APAAEQPAQQPYY---APAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTY 462
dnaA PRK14086
chromosomal replication initiator protein DnaA;
156-301 1.68e-04

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 42.89  E-value: 1.68e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 156 PCHRRHRMFHRKPMPEYQPPPSPVYGTPA-----PGCSCSP--PSTPPGY------GQPAPECPPADPGYGQPAPECPPP 222
Cdd:PRK14086   97 PPPPHARRTSEPELPRPGRRPYEGYGGPRaddrpPGLPRQDqlPTARPAYpayqqrPEPGAWPRAADDYGWQQQRLGFPP 176

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 223 PTPAPECGQPAPEYPPSTPAYGTPAPECPPSTPEYGTPA------------TACPPPTA--------PGYGSPSPFWPPV 282
Cdd:PRK14086  177 RAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHPRpdwdrprrdrtdRPEPPPGAghvhrggpGPPERDDAPVVPI 256

                         170       180
                  ....*....|....*....|..
gi 1002300968 283 SPAYGTP---SPTPIYRPPGSH 301
Cdd:PRK14086  257 RPSAPGPlaaQPAPAPGPGEPT 278
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
75-295 4.47e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 41.79  E-value: 4.47e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968  75 GELDGAGAFAVPLAADLRGADCVAQLHSAATDAPCPGQEPSKIEPlssegetgtfvAVAGKTHLPSSTSSSPECSSVAIC 154
Cdd:PRK12323  366 GQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAP-----------AAAAAARAVAAAPARRSPAPEALA 434

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 155 FPCHRRHRMFHRKPMPEYQPPPSPVYGTPAPGCSCSPP----STPPGYGQPAPECPPADPGYG--QPAPECPPPPTPAPE 228
Cdd:PRK12323  435 AARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVaaaaAAAPARAAPAAAPAPADDDPPpwEELPPEFASPAPAQP 514

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1002300968 229 CGQPAPEYPPSTPAYGTPAPECPPSTPEYGTPATACPPPTAPgygsPSPFWPPVSPAYGTPSPTPIY 295
Cdd:PRK12323  515 DAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAA----TEPVVAPRPPRASASGLPDMF 577
dnaA PRK14086
chromosomal replication initiator protein DnaA;
171-299 5.74e-04

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 41.35  E-value: 5.74e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 171 EYQPPPSPVYGTPAPGCSCSPPSTPPGYGQPAPECPPADPGYGQPAPECPPPPTPAPECGQPAPEYPPSTPAYGTPAPEC 250
Cdd:PRK14086   94 EPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAYQQRPEPGAWPRAADDYGWQQQRLG 173

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1002300968 251 PPSTPEYGTPATACPPPT--APGYGSPSPFWPPVSPAYGTPSPTpiYRPPG 299
Cdd:PRK14086  174 FPPRAPYASPASYAPEQErdREPYDAGRPEYDQRRRDYDHPRPD--WDRPR 222
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 167-279 6.84e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 41.24  E-value: 6.84e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 167 KPMPEYQPPPSPvygTPAPGCSCSPPSTPPGYGQPAPECPPAdpgygQPAPECPPPPTPAPECGQPAPEYPPSTPAYGTP 246
Cdd:PRK14951  392 APVAQAAAAPAP---AAAPAAAASAPAAPPAAAPPAPVAAPA-----AAAPAAAPAAAPAAVALAPAPPAQAAPETVAIP 463

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1002300968 247 APECP-PSTPEYGTPATACPPPTAPGYGSPSPFW 279
Cdd:PRK14951  464 VRVAPePAVASAAPAPAAAPAAARLTPTEEGDVW 497
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 174-300 7.57e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.12  E-value: 7.57e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 174 PPPSPVYGTPAPGCSCSPPSTPPGYGQPAPECPPADPGYGQPAPECPPPPTPAPECGQPAPEYPPSTPAYGTPAPECPPS 253
Cdd:PRK07764  600 PPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPA 679

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1002300968 254 TPEYGTPATACPPPTAPGYGSPSPFWPPVSPAYGTPSPTPIYRPPGS 300
Cdd:PRK07764  680 APPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQ 726
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 174-277 1.07e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 40.56  E-value: 1.07e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 174 PPPSPVYGTPAPgcscspPSTPPGYGQPAPECPPADPgygqpapECPPPPTPAPECGQPAPEYPPSTPAyGTPAPECPPS 253
Cdd:PRK14950  362 PVPAPQPAKPTA------AAPSPVRPTPAPSTRPKAA-------AAANIPPKEPVRETATPPPVPPRPV-APPVPHTPES 427

                          90       100
                  ....*....|....*....|....
gi 1002300968 254 TPEygTPATACPPPTAPGYGSPSP 277
Cdd:PRK14950  428 APK--LTRAAIPVDEKPKYTPPAP 449
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 162-299 1.99e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 39.70  E-value: 1.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 162 RMFHRKPMPEYQPPPSPVYGTPAPGCSCSPPSTPPGYGQPAPECPPADPGYGQPAPECPPPpTPAPECGQPAPEYPPSTP 241
Cdd:PRK14951  360 RLLAFKPAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAA-APPAPVAAPAAAAPAAAP 438

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1002300968 242 AYGTPAPECPPSTPEYGTPATACPPP-TAPGYGSPSpfwPPVSPAYGTPSPTPIYRPPG 299
Cdd:PRK14951  439 AAAPAAVALAPAPPAQAAPETVAIPVrVAPEPAVAS---AAPAPAAAPAAARLTPTEEG 494
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 167-298 2.04e-03

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 39.68  E-value: 2.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968  167 KPMPEYQPPPSPvyGTPAPGCSCSPPSTPPGYGQPAPECPPADPgYGQPAPECPPPPTPAPECGQPAPEYPPSTPA---- 242
Cdd:PRK10263   355 QPTVAWQPVPGP--QTGEPVIAPAPEGYPQQSQYAQPAVQYNEP-LQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQpaqq 431

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1002300968  243 -YGTPAPECPPSTPEYGTPATACPPPTAPGYGSPSPFWPPVSPAYGTPSPTPIYRPP 298
Cdd:PRK10263   432 pYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQP 488
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 173-299 2.05e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.58  E-value: 2.05e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 173 QPPPSPVYGTPAPGCSCSPPSTPPGYGQPA--PECPPADPGYGQPAPECPPPPTPAPECGQPAPEYPPSTPAYGTPAPEC 250
Cdd:PRK07764  626 APAPAGAAAAPAEASAAPAPGVAAPEHHPKhvAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAP 705

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1002300968 251 PPSTPEYGTPATACPPPTAP-GYGSPSPFWPPVSPAYGTPSPTPIYRPPG 299
Cdd:PRK07764  706 AATPPAGQADDPAAQPPQAAqGASAPSPAADDPVPLPPEPDDPPDPAGAP 755
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
170-299 2.17e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 39.47  E-value: 2.17e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 170 PEYQPPPSPVYGTPAPGCSCSPPSTPPGYGQPAPECPP--ADPGYGQPAPECPPPPTPAPECGQPAPEYPPSTPAyGTPA 247
Cdd:PRK12323  381 PVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAvaAAPARRSPAPEALAAARQASARGPGGAPAPAPAPA-AAPA 459

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1002300968 248 PECPPstpeygtPATACPPPTAPGYGSPSPFWPPVSPAYGTPSPTPIYRPPG 299
Cdd:PRK12323  460 AAARP-------AAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPP 504
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 161-293 2.20e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.58  E-value: 2.20e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 161 HRMFHRKPMPEYQPPPSPVYGTPAPGCSCSPPSTPPGYGQPAPECPPADPGY--GQPAPECPPPPTPAPECGQPAPEYPP 238
Cdd:PRK07764  575 AEELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAApaPAGAAAAPAEASAAPAPGVAAPEHHP 654

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1002300968 239 STPAYGTPAPECPPSTPEYGTPATACPPPTAPGYGSPSPFWPPVSPAYGTPSPTP 293
Cdd:PRK07764  655 KHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATP 709
PHA03247 PHA03247
large tegument protein UL36; Provisional
 166-300 2.64e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 39.54  E-value: 2.64e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968  166 RKPMPEYQPPP-SPVYGTPAPGCSCSPPSTPPGYGQPAPECPPADPGYGQPAPECPPPPTPAPECGQPA----PEYPPST 240
Cdd:PHA03247  2681 QRPRRRAARPTvGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPAtpggPARPARP 2760

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1002300968  241 PAYGTPAPECPPSTPEYGTPATACPPPTAPGYGS----PSPfWPPVSPAYGTPSPTPIYRPPGS 300
Cdd:PHA03247  2761 PTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESreslPSP-WDPADPPAAVLAPAAALPPAAS 2823
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 192-298 3.95e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 38.64  E-value: 3.95e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 192 PSTPPGYGQPAPECPPAdpgygqpapecpppptpapECGQPAPEYPPSTPAYGTPAPEcpPSTPEYGTPATACPPPTAPG 271
Cdd:PRK14950  362 PVPAPQPAKPTAAAPSP-------------------VRPTPAPSTRPKAAAAANIPPK--EPVRETATPPPVPPRPVAPP 420

                          90       100
                  ....*....|....*....|....*..
gi 1002300968 272 YGSPSPFWPPVSPAYGTPSPTPIYRPP 298
Cdd:PRK14950  421 VPHTPESAPKLTRAAIPVDEKPKYTPP 447
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 174-275 4.17e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 38.81  E-value: 4.17e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 174 PPPSPVYGTPAPGCSCSPPSTPPGYGQPAPECPPADPGYGQPAPECPPPPTPAPECGQPAPEYPPSTPAYGTPAPEcPPS 253
Cdd:PRK07764  408 AAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPA-PPA 486

                          90       100
                  ....*....|....*....|..
gi 1002300968 254 TPEYGTPATACPPPTAPGYGSP 275
Cdd:PRK07764  487 APAPAAAPAAPAAPAAPAGADD 508
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 178-300 6.37e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 38.16  E-value: 6.37e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 178 PVYGTPAPGCSCSPPSTPPGYGQPAPEcPPADPGYGQPAPEcPPPPTPAPECGQPAPEYPPSTPAygtPAPECPPSTPEY 257
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAAA-PVAQAAAAPAPAA-APAAAASAPAAPPAAAPPAPVAA---PAAAAPAAAPAA 440

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1002300968 258 GtPATACPPPTAPGYGSPSPFWPPVS----PAYGTPSPTPIYRPPGS 300
Cdd:PRK14951  441 A-PAAVALAPAPPAQAAPETVAIPVRvapePAVASAAPAPAAAPAAA 486
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 181-298 8.65e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 37.66  E-value: 8.65e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968 181 GTPAPGCSCSPPSTPPGYGQPAPECPPADPGYGQPAPECPPPPTPAPECGQPAPEyPPSTPAYGTPAPECPPSTPEYGTP 260
Cdd:PRK07764  384 RLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPA-PAPPSPAGNAPAGGAPSPPPAAAP 462

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1002300968 261 AtacPPPTAPGYGSPSPFWPPVSPAYGTPSPTPIYRPP 298
Cdd:PRK07764  463 S---AQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAP 497
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 164-301 8.72e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 37.84  E-value: 8.72e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968  164 FHRKPMPEYQPPPSPVYGTPAPGCSCSPPSTPPGYGQPAPECPPADPGYGQPAPECPPPPTPAPECGQPAPEYPPSTPAY 243
Cdd:PHA03307    76 GTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAA 155

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968  244 GTPAPECPPSTPEYGTPA--TACPPPTAPGYGSPSPFWPPVSPAYGTPSPTPIYRPPGSH 301
Cdd:PHA03307   156 GASPAAVASDAASSRQAAlpLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISA 215
PHA03247 PHA03247
large tegument protein UL36; Provisional
 82-292 9.36e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 37.61  E-value: 9.36e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968   82 AFAVPLAADLRGADCVAQLHSAATDAPCPGQEPSKIEPLSSEGETG-----TFVAVAGKTHLPSSTSSSPECSSVAICFP 156
Cdd:PHA03247  2782 RLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPlppptSAQPTAPPPPPGPPPPSLPLGGSVAPGGD 2861

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002300968  157 CHRRHRMFHRKPMPEYQPPPsPVYGTPAPGCSCSPPSTPPGYGQPAPECPPADPGYGQPAPECPPPPTPAPECGQPAPEY 236
Cdd:PHA03247  2862 VRRRPPSRSPAAKPAAPARP-PVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQ 2940

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1002300968  237 PPSTPAYGT-PAPECPPSTPEYGTPATACPPPTAPGYGSPSPFWPPVSPAYGTPSPT 292
Cdd:PHA03247  2941 PPLAPTTDPaGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLT 2997
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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