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Conserved domains on  [gi|1002302562|ref|XP_015614659|]
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protein ARABIDILLO 2 isoform X1 [Oryza sativa Japonica Group]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN03200 super family cl33659
cellulose synthase-interactive protein; Provisional
 229-533 8.16e-10

cellulose synthase-interactive protein; Provisional


The actual alignment was detected with superfamily member PLN03200:

Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 62.43  E-value: 8.16e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  229 HAEAKhRAVDGL---------------LDALREDEKSVLSAL-GRGNVAALVQLLTATAPKIREKAATVLCLL-AESGSC 291
Cdd:PLN03200   402 HAEAK-KVLVGLitmatadvqeeliraLSSLCCGKGGLWEALgGREGVQLLISLLGLSSEQQQEYAVALLAILtDEVDES 480

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  292 ECLLVSEGALPPLIRLVESGSLVGREKAVITLQRL-SMSPDIaRAIVGHSGVRP-LIDICQTGDSISQSAAAGALKNL-- 367
Cdd:PLN03200   481 KWAITAAGGIPPLVQLLETGSQKAKEDSATVLWNLcCHSEDI-RACVESAGAVPaLLWLLKNGGPKGQEIAAKTLTKLvr 559

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  368 ---SAVPEVRQALAEEGIVRVMVNLLDcgvVLGckeyaaeCLQSLTSSNDGLRRAVVSEGGLRSLLAYLDGPLP--QESA 442
Cdd:PLN03200   560 tadAATISQLTALLLGDLPESKVHVLD---VLG-------HVLSVASLEDLVREGSAANDALRTLIQLLSSSKEetQEKA 629

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  443 VGALRNLVSSaiSPD---SLVSLGVLPRLVHVLREGSVGAQQAAAAAICRVSSSSEMKRLVG--EHGCMPLLVRLLEAKS 517
Cdd:PLN03200   630 ASVLADIFSS--RQDlceSLATDEIINPCIKLLTNNTEAVATQSARALAALSRSIKENRKVSyaAEDAIKPLIKLAKSSS 707

                          330
                   ....*....|....*.
gi 1002302562  518 NGAREVAAQAVASLMS 533
Cdd:PLN03200   708 IEVAEQAVCALANLLS 723
 
Name Accession Description Interval E-value
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 229-533 8.16e-10

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 62.43  E-value: 8.16e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  229 HAEAKhRAVDGL---------------LDALREDEKSVLSAL-GRGNVAALVQLLTATAPKIREKAATVLCLL-AESGSC 291
Cdd:PLN03200   402 HAEAK-KVLVGLitmatadvqeeliraLSSLCCGKGGLWEALgGREGVQLLISLLGLSSEQQQEYAVALLAILtDEVDES 480

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  292 ECLLVSEGALPPLIRLVESGSLVGREKAVITLQRL-SMSPDIaRAIVGHSGVRP-LIDICQTGDSISQSAAAGALKNL-- 367
Cdd:PLN03200   481 KWAITAAGGIPPLVQLLETGSQKAKEDSATVLWNLcCHSEDI-RACVESAGAVPaLLWLLKNGGPKGQEIAAKTLTKLvr 559

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  368 ---SAVPEVRQALAEEGIVRVMVNLLDcgvVLGckeyaaeCLQSLTSSNDGLRRAVVSEGGLRSLLAYLDGPLP--QESA 442
Cdd:PLN03200   560 tadAATISQLTALLLGDLPESKVHVLD---VLG-------HVLSVASLEDLVREGSAANDALRTLIQLLSSSKEetQEKA 629

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  443 VGALRNLVSSaiSPD---SLVSLGVLPRLVHVLREGSVGAQQAAAAAICRVSSSSEMKRLVG--EHGCMPLLVRLLEAKS 517
Cdd:PLN03200   630 ASVLADIFSS--RQDlceSLATDEIINPCIKLLTNNTEAVATQSARALAALSRSIKENRKVSyaAEDAIKPLIKLAKSSS 707

                          330
                   ....*....|....*.
gi 1002302562  518 NGAREVAAQAVASLMS 533
Cdd:PLN03200   708 IEVAEQAVCALANLLS 723
SRP1 COG5064
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
220-571 1.49e-04

Karyopherin (importin) alpha [Intracellular trafficking and secretion];


Pssm-ID: 227396 [Multi-domain]  Cd Length: 526  Bit Score: 44.88  E-value: 1.49e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562 220 ELLARLQIGHAEAKHRAVDGLLDAL-REDEKSVLSALGRGNVAALVQLLTATAPKIRE-KAATVLCLLAESGSCECLLVS 297
Cdd:COG5064    75 QLTQQLFSDDIEQQLQAVYKFRKLLsKETSPPIQPVIDAGVVPRFVEFMDEIQRDMLQfEAAWALTNIASGTTQQTKVVV 154

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562 298 E-GALPPLIRLVESGSLVGREKAVITLQRLSMSPDIARAIVGHSGV-RPLIDICQTgDSISQSAAAGALKNLSAVPEVRQ 375
Cdd:COG5064   155 DaGAVPLFIQLLSSTEDDVREQAVWALGNIAGDSEGCRDYVLQCGAlEPLLGLLLS-SAIHISMLRNATWTLSNLCRGKN 233

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562 376 ALAEEGIVRVMVNLLDCGVVLGCKEYAAECLQSLTSSNDGLRR---AVVSEGGLRSLLAYLDGP--LPQESAVGALRNLV 450
Cdd:COG5064   234 PPPDWSNISQALPILAKLIYSRDPEVLVDACWAISYLSDGPNEkiqAVLDVGIPGRLVELLSHEsaKIQTPALRSVGNIV 313

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562 451 S-SAISPDSLVSLGVLPRLVHVLREGSVGAQQAAAAAICRVSS-SSEMKRLVGEHGCMPLLVRLLEAKSNGAREVAAQAV 528
Cdd:COG5064   314 TgSDDQTQVIINCGALKAFRSLLSSPKENIRKEACWTISNITAgNTEQIQAVIDANLIPPLIHLLSSAEYKIKKEACWAI 393

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1002302562 529 ASLMSCLANARDIKK---DEKSVPNLVQLLEPSPqNTAKKYAISCL 571
Cdd:COG5064   394 SNATSGGLNRPDIIRylvSQGFIKPLCDLLDVVD-NKIIEVALDAI 438
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 493-533 5.31e-03

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 35.12  E-value: 5.31e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1002302562 493 SSEMKRLVGEHGCMPLLVRLLEAKSNGAREVAAQAVASLMS 533
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
 
Name Accession Description Interval E-value
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 229-533 8.16e-10

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 62.43  E-value: 8.16e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  229 HAEAKhRAVDGL---------------LDALREDEKSVLSAL-GRGNVAALVQLLTATAPKIREKAATVLCLL-AESGSC 291
Cdd:PLN03200   402 HAEAK-KVLVGLitmatadvqeeliraLSSLCCGKGGLWEALgGREGVQLLISLLGLSSEQQQEYAVALLAILtDEVDES 480

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  292 ECLLVSEGALPPLIRLVESGSLVGREKAVITLQRL-SMSPDIaRAIVGHSGVRP-LIDICQTGDSISQSAAAGALKNL-- 367
Cdd:PLN03200   481 KWAITAAGGIPPLVQLLETGSQKAKEDSATVLWNLcCHSEDI-RACVESAGAVPaLLWLLKNGGPKGQEIAAKTLTKLvr 559

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  368 ---SAVPEVRQALAEEGIVRVMVNLLDcgvVLGckeyaaeCLQSLTSSNDGLRRAVVSEGGLRSLLAYLDGPLP--QESA 442
Cdd:PLN03200   560 tadAATISQLTALLLGDLPESKVHVLD---VLG-------HVLSVASLEDLVREGSAANDALRTLIQLLSSSKEetQEKA 629

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  443 VGALRNLVSSaiSPD---SLVSLGVLPRLVHVLREGSVGAQQAAAAAICRVSSSSEMKRLVG--EHGCMPLLVRLLEAKS 517
Cdd:PLN03200   630 ASVLADIFSS--RQDlceSLATDEIINPCIKLLTNNTEAVATQSARALAALSRSIKENRKVSyaAEDAIKPLIKLAKSSS 707

                          330
                   ....*....|....*.
gi 1002302562  518 NGAREVAAQAVASLMS 533
Cdd:PLN03200   708 IEVAEQAVCALANLLS 723
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 258-477 2.35e-07

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 54.34  E-value: 2.35e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  258 GNVAALVQLLTATAPKIREKAATVLC-LLAESGSCECLLVSEGALPPLIRLVESGSLVGREKAVITLQRLSMSPDIAR-- 334
Cdd:PLN03200   488 GGIPPLVQLLETGSQKAKEDSATVLWnLCCHSEDIRACVESAGAVPALLWLLKNGGPKGQEIAAKTLTKLVRTADAATis 567

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  335 ------------------AIVGH------------------SGVRPLIDICQTGDSISQSAAAGALKNL-SAVPEVRQAL 377
Cdd:PLN03200   568 qltalllgdlpeskvhvlDVLGHvlsvasledlvregsaanDALRTLIQLLSSSKEETQEKAASVLADIfSSRQDLCESL 647

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  378 AEEGIVRVMVNLLDCGVVLGCKEyAAECLQSLTSSNDGLRR-AVVSEGGLRSL--LAYLDGPLPQESAVGALRNLVSSA- 453
Cdd:PLN03200   648 ATDEIINPCIKLLTNNTEAVATQ-SARALAALSRSIKENRKvSYAAEDAIKPLikLAKSSSIEVAEQAVCALANLLSDPe 726

                          250       260
                   ....*....|....*....|....
gi 1002302562  454 ISPDSLVSLGVLPrLVHVLREGSV 477
Cdd:PLN03200   727 VAAEALAEDIILP-LTRVLREGTL 749
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 231-449 6.99e-07

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 52.80  E-value: 6.99e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  231 EAKHRAVDGLLDAlREDEKSVLSALGRGnVAALVQLLTATAPKIREKAATVLCLLAESGSCECLLVSEGALPPLIRLVES 310
Cdd:PLN03200    33 ELTTARLLELAKT-REEARKAIGSHSQA-MPLLVSLLRSGTLGAKVNAAAVLGVLCKEEDLRVKVLLGGCIPPLLSLLKS 110

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  311 GSLVGREKAVITLQRLS---MSPDIARAIVGHSGVRP------------------------------------------- 344
Cdd:PLN03200   111 GSAEAQKAAAEAIYAVSsggLSDHVGSKIFSTEGVVPslwdqlqpgnkqdkvveglltgalrnlcgstdgfwsatleagg 190

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  345 ---LIDICQTGDSISQSAAAGALKNL-SAVPEVRQALAEEGIVRVMVNLLDCGVVLGCKEYAAECLQSLTSSNDGLRRAV 420
Cdd:PLN03200   191 vdiLVKLLSSGNSDAQANAASLLARLmMAFESSISKVLDAGAVKQLLKLLGQGNEVSVRAEAAGALEALSSQSKEAKQAI 270

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|
gi 1002302562  421 VSEGGLRSLLAYLDGPLP-----------QESAVGALRNL 449
Cdd:PLN03200   271 ADAGGIPALINATVAPSKefmqgefaqalQENAMGALANI 310
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 331-602 1.26e-06

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 52.03  E-value: 1.26e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  331 DIARAIVGHSGVRPLIDICQTGDSISQSAAAGALKNLSA-VPEVRQALAEEGIVRVMVNLLDCGVVlGCKEYAAECLQSL 409
Cdd:PLN03200   437 GLWEALGGREGVQLLISLLGLSSEQQQEYAVALLAILTDeVDESKWAITAAGGIPPLVQLLETGSQ-KAKEDSATVLWNL 515

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  410 TSSNDGLRRAVVSEGGLRSLLAYLD--GPLPQESAVGALRNLV----SSAISPDSLVSLGVLPRL-VHVLRE-GSVGAQQ 481
Cdd:PLN03200   516 CCHSEDIRACVESAGAVPALLWLLKngGPKGQEIAAKTLTKLVrtadAATISQLTALLLGDLPESkVHVLDVlGHVLSVA 595

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  482 AAAAAICRVSSSSEMKRLvgehgcmplLVRLLEAKSNGAREVAAQAVASLMSCLANARDIKKDEKSVPNLVQLLEPSPQN 561
Cdd:PLN03200   596 SLEDLVREGSAANDALRT---------LIQLLSSSKEETQEKAASVLADIFSSRQDLCESLATDEIINPCIKLLTNNTEA 666

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*.
gi 1002302562  562 TAKKYAiSCLLTLSASKRCKKLM--ISHGAIGYLKKL---SEMDVA 602
Cdd:PLN03200   667 VATQSA-RALAALSRSIKENRKVsyAAEDAIKPLIKLaksSSIEVA 711
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 299-450 1.17e-04

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 45.48  E-value: 1.17e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  299 GALPPLIRLVESGSLVGREKAVITLQRLSMSPDIARAIVGHSGVRPLIDICQTGDSISQSAAAGALKNLSA-VPEVRQAL 377
Cdd:PLN03200  1232 GAVNQLVAVLRLGSRSARYSAARALQELFSAEHIRDSELARQAVQPLVEMLNTGSESEQHAAIGALIKLSSgNPSKALAI 1311

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1002302562  378 A--EEGIVRVMVNLLDCGVVLGCKEYAAEcLQSLTSSNDGLRRAVVSEGGLRSLLAYL--DGPLPQESAVGALRNLV 450
Cdd:PLN03200  1312 AdvEGNALENLCKILSSDSSLELKEDAAE-LCRVLFTNTRIRSTPAAARCIEPLISLLvsESSTAQEAGVCALDRLL 1387
SRP1 COG5064
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
220-571 1.49e-04

Karyopherin (importin) alpha [Intracellular trafficking and secretion];


Pssm-ID: 227396 [Multi-domain]  Cd Length: 526  Bit Score: 44.88  E-value: 1.49e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562 220 ELLARLQIGHAEAKHRAVDGLLDAL-REDEKSVLSALGRGNVAALVQLLTATAPKIRE-KAATVLCLLAESGSCECLLVS 297
Cdd:COG5064    75 QLTQQLFSDDIEQQLQAVYKFRKLLsKETSPPIQPVIDAGVVPRFVEFMDEIQRDMLQfEAAWALTNIASGTTQQTKVVV 154

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562 298 E-GALPPLIRLVESGSLVGREKAVITLQRLSMSPDIARAIVGHSGV-RPLIDICQTgDSISQSAAAGALKNLSAVPEVRQ 375
Cdd:COG5064   155 DaGAVPLFIQLLSSTEDDVREQAVWALGNIAGDSEGCRDYVLQCGAlEPLLGLLLS-SAIHISMLRNATWTLSNLCRGKN 233

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562 376 ALAEEGIVRVMVNLLDCGVVLGCKEYAAECLQSLTSSNDGLRR---AVVSEGGLRSLLAYLDGP--LPQESAVGALRNLV 450
Cdd:COG5064   234 PPPDWSNISQALPILAKLIYSRDPEVLVDACWAISYLSDGPNEkiqAVLDVGIPGRLVELLSHEsaKIQTPALRSVGNIV 313

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562 451 S-SAISPDSLVSLGVLPRLVHVLREGSVGAQQAAAAAICRVSS-SSEMKRLVGEHGCMPLLVRLLEAKSNGAREVAAQAV 528
Cdd:COG5064   314 TgSDDQTQVIINCGALKAFRSLLSSPKENIRKEACWTISNITAgNTEQIQAVIDANLIPPLIHLLSSAEYKIKKEACWAI 393

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1002302562 529 ASLMSCLANARDIKK---DEKSVPNLVQLLEPSPqNTAKKYAISCL 571
Cdd:COG5064   394 SNATSGGLNRPDIIRylvSQGFIKPLCDLLDVVD-NKIIEVALDAI 438
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 260-537 3.74e-04

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 43.94  E-value: 3.74e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  260 VAALVQLLTATAPKIREKAAT---VLCLLAESGSCECLLVSEG-ALPPLIRLVESGSLVGREKAVITLQRLSMSPDIARA 335
Cdd:PLN03200    15 VAQCIEQLRAKSSSPQEKELTtarLLELAKTREEARKAIGSHSqAMPLLVSLLRSGTLGAKVNAAAVLGVLCKEEDLRVK 94

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  336 IVGHSGVRPLIDICQTGDSISQSAAAGALKNLS---AVPEV-RQALAEEGIVRVMVNLLDCG-----VVLGckeYAAECL 406
Cdd:PLN03200    95 VLLGGCIPPLLSLLKSGSAEAQKAAAEAIYAVSsggLSDHVgSKIFSTEGVVPSLWDQLQPGnkqdkVVEG---LLTGAL 171

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  407 QSLTSSNDGLRRAVVSEGGLRSLLAYL--DGPLPQESAVGALRNLVSSAISPDSLV-SLGVLPRLVHVLREG-SVGAQQA 482
Cdd:PLN03200   172 RNLCGSTDGFWSATLEAGGVDILVKLLssGNSDAQANAASLLARLMMAFESSISKVlDAGAVKQLLKLLGQGnEVSVRAE 251

                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1002302562  483 AAAAICRVSS-SSEMKRLVGEHGCMPLLVRLLEAKSNG-AREVAAQAVAS-LMSCLAN 537
Cdd:PLN03200   252 AAGALEALSSqSKEAKQAIADAGGIPALINATVAPSKEfMQGEFAQALQEnAMGALAN 309
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 493-533 5.31e-03

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 35.12  E-value: 5.31e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1002302562 493 SSEMKRLVGEHGCMPLLVRLLEAKSNGAREVAAQAVASLMS 533
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 218-409 5.39e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 40.09  E-value: 5.39e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  218 VRELLARLQIGHAEAKH---RAVDGLLDAlredEKSVLSALGRGNVAALVQLLTATAPKIREKAATVLCLLAESGSCECL 294
Cdd:PLN03200  1234 VNQLVAVLRLGSRSARYsaaRALQELFSA----EHIRDSELARQAVQPLVEMLNTGSESEQHAAIGALIKLSSGNPSKAL 1309

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002302562  295 LV--SEG-ALPPLIRLVESGSLVGREKAVITLQRLSMSPDIARAIVGHSG-VRPLIDICQTGDSISQSAAAGALKNLSAV 370
Cdd:PLN03200  1310 AIadVEGnALENLCKILSSDSSLELKEDAAELCRVLFTNTRIRSTPAAARcIEPLISLLVSESSTAQEAGVCALDRLLDD 1389

                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1002302562  371 PEVRQALAEEGIVRVMVNLLdCGVVLGCKEYAAECLQSL 409
Cdd:PLN03200  1390 EQLAELVAAHGAVVPLVGLV-VGTNYVLHEAAISALIKL 1427
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 329-369 6.80e-03

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 34.74  E-value: 6.80e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1002302562 329 SPDIARAIVGHSGVRPLIDICQTGDSISQSAAAGALKNLSA 369
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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