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uncharacterized protein [Oryza sativa Japonica Group]
DRY_EERY and SWAP domain-containing protein( domain architecture ID 10560971)
DRY_EERY and SWAP domain-containing protein
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
DRY_EERY | pfam09750 | Alternative splicing regulator; This entry represents the conserved N-terminal region of SWAP ... |
3-123 | 6.90e-28 | |||
Alternative splicing regulator; This entry represents the conserved N-terminal region of SWAP (suppressor-of-white-apricot protein) proteins. This region contains two highly conserved motifs, viz: DRY and EERY, which appear to be the sites for alternative splicing of exons 2 and 3 of the SWAP mRNA. These proteins are thus thought to be involved in auto-regulation of pre-mRNA splicing. Most family members are associated with two Surp domains pfam01805 and an Arginine- serine-rich binding region towards the C-terminus. : Pssm-ID: 462881 Cd Length: 129 Bit Score: 109.33 E-value: 6.90e-28
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SWAP | smart00648 | Suppressor-of-White-APricot splicing regulator; domain present in regulators which are ... |
158-210 | 9.84e-15 | |||
Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible for pre-mRNA splicing processes : Pssm-ID: 197818 [Multi-domain] Cd Length: 54 Bit Score: 69.15 E-value: 9.84e-15
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SWAP | smart00648 | Suppressor-of-White-APricot splicing regulator; domain present in regulators which are ... |
358-411 | 6.79e-14 | |||
Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible for pre-mRNA splicing processes : Pssm-ID: 197818 [Multi-domain] Cd Length: 54 Bit Score: 66.84 E-value: 6.79e-14
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Name | Accession | Description | Interval | E-value | |||
DRY_EERY | pfam09750 | Alternative splicing regulator; This entry represents the conserved N-terminal region of SWAP ... |
3-123 | 6.90e-28 | |||
Alternative splicing regulator; This entry represents the conserved N-terminal region of SWAP (suppressor-of-white-apricot protein) proteins. This region contains two highly conserved motifs, viz: DRY and EERY, which appear to be the sites for alternative splicing of exons 2 and 3 of the SWAP mRNA. These proteins are thus thought to be involved in auto-regulation of pre-mRNA splicing. Most family members are associated with two Surp domains pfam01805 and an Arginine- serine-rich binding region towards the C-terminus. Pssm-ID: 462881 Cd Length: 129 Bit Score: 109.33 E-value: 6.90e-28
|
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SWAP | smart00648 | Suppressor-of-White-APricot splicing regulator; domain present in regulators which are ... |
158-210 | 9.84e-15 | |||
Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible for pre-mRNA splicing processes Pssm-ID: 197818 [Multi-domain] Cd Length: 54 Bit Score: 69.15 E-value: 9.84e-15
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SWAP | smart00648 | Suppressor-of-White-APricot splicing regulator; domain present in regulators which are ... |
358-411 | 6.79e-14 | |||
Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible for pre-mRNA splicing processes Pssm-ID: 197818 [Multi-domain] Cd Length: 54 Bit Score: 66.84 E-value: 6.79e-14
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Surp | pfam01805 | Surp module; This domain is also known as the SWAP domain. SWAP stands for ... |
159-207 | 7.13e-13 | |||
Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding. Pssm-ID: 460339 [Multi-domain] Cd Length: 52 Bit Score: 63.69 E-value: 7.13e-13
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Surp | pfam01805 | Surp module; This domain is also known as the SWAP domain. SWAP stands for ... |
359-408 | 1.77e-11 | |||
Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding. Pssm-ID: 460339 [Multi-domain] Cd Length: 52 Bit Score: 59.84 E-value: 1.77e-11
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Name | Accession | Description | Interval | E-value | |||
DRY_EERY | pfam09750 | Alternative splicing regulator; This entry represents the conserved N-terminal region of SWAP ... |
3-123 | 6.90e-28 | |||
Alternative splicing regulator; This entry represents the conserved N-terminal region of SWAP (suppressor-of-white-apricot protein) proteins. This region contains two highly conserved motifs, viz: DRY and EERY, which appear to be the sites for alternative splicing of exons 2 and 3 of the SWAP mRNA. These proteins are thus thought to be involved in auto-regulation of pre-mRNA splicing. Most family members are associated with two Surp domains pfam01805 and an Arginine- serine-rich binding region towards the C-terminus. Pssm-ID: 462881 Cd Length: 129 Bit Score: 109.33 E-value: 6.90e-28
|
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SWAP | smart00648 | Suppressor-of-White-APricot splicing regulator; domain present in regulators which are ... |
158-210 | 9.84e-15 | |||
Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible for pre-mRNA splicing processes Pssm-ID: 197818 [Multi-domain] Cd Length: 54 Bit Score: 69.15 E-value: 9.84e-15
|
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SWAP | smart00648 | Suppressor-of-White-APricot splicing regulator; domain present in regulators which are ... |
358-411 | 6.79e-14 | |||
Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible for pre-mRNA splicing processes Pssm-ID: 197818 [Multi-domain] Cd Length: 54 Bit Score: 66.84 E-value: 6.79e-14
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Surp | pfam01805 | Surp module; This domain is also known as the SWAP domain. SWAP stands for ... |
159-207 | 7.13e-13 | |||
Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding. Pssm-ID: 460339 [Multi-domain] Cd Length: 52 Bit Score: 63.69 E-value: 7.13e-13
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Surp | pfam01805 | Surp module; This domain is also known as the SWAP domain. SWAP stands for ... |
359-408 | 1.77e-11 | |||
Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding. Pssm-ID: 460339 [Multi-domain] Cd Length: 52 Bit Score: 59.84 E-value: 1.77e-11
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Blast search parameters | ||||
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