wall-associated receptor kinase 3 isoform X2 [Oryza sativa Japonica Group]
Protein Classification
GUB_WAK_bind and EGF_CA domain-containing protein( domain architecture ID 10622381)
GUB_WAK_bind and EGF_CA domain-containing protein
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| GUB_WAK_bind | pfam13947 | Wall-associated receptor kinase galacturonan-binding; This cysteine-rich GUB_WAK_bind domain ... |
42-103 | 2.03e-09 | ||
Wall-associated receptor kinase galacturonan-binding; This cysteine-rich GUB_WAK_bind domain is the extracellular part of this serine/threonine kinase that binds to the cell-wall pectins. : Pssm-ID: 464052 Cd Length: 64 Bit Score: 53.44 E-value: 2.03e-09
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| EGF_CA | cd00054 | Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ... |
325-353 | 1.50e-05 | ||
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. : Pssm-ID: 238011 Cd Length: 38 Bit Score: 41.85 E-value: 1.50e-05
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| Name | Accession | Description | Interval | E-value | ||
| GUB_WAK_bind | pfam13947 | Wall-associated receptor kinase galacturonan-binding; This cysteine-rich GUB_WAK_bind domain ... |
42-103 | 2.03e-09 | ||
Wall-associated receptor kinase galacturonan-binding; This cysteine-rich GUB_WAK_bind domain is the extracellular part of this serine/threonine kinase that binds to the cell-wall pectins. Pssm-ID: 464052 Cd Length: 64 Bit Score: 53.44 E-value: 2.03e-09
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| EGF_CA | cd00054 | Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ... |
325-353 | 1.50e-05 | ||
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Pssm-ID: 238011 Cd Length: 38 Bit Score: 41.85 E-value: 1.50e-05
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| EGF_CA | smart00179 | Calcium-binding EGF-like domain; |
325-353 | 1.59e-05 | ||
Calcium-binding EGF-like domain; Pssm-ID: 214542 [Multi-domain] Cd Length: 39 Bit Score: 41.85 E-value: 1.59e-05
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| EGF_CA | pfam07645 | Calcium-binding EGF domain; |
325-353 | 1.48e-03 | ||
Calcium-binding EGF domain; Pssm-ID: 429571 Cd Length: 32 Bit Score: 36.06 E-value: 1.48e-03
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| Name | Accession | Description | Interval | E-value | ||
| GUB_WAK_bind | pfam13947 | Wall-associated receptor kinase galacturonan-binding; This cysteine-rich GUB_WAK_bind domain ... |
42-103 | 2.03e-09 | ||
Wall-associated receptor kinase galacturonan-binding; This cysteine-rich GUB_WAK_bind domain is the extracellular part of this serine/threonine kinase that binds to the cell-wall pectins. Pssm-ID: 464052 Cd Length: 64 Bit Score: 53.44 E-value: 2.03e-09
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| EGF_CA | cd00054 | Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ... |
325-353 | 1.50e-05 | ||
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Pssm-ID: 238011 Cd Length: 38 Bit Score: 41.85 E-value: 1.50e-05
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| EGF_CA | smart00179 | Calcium-binding EGF-like domain; |
325-353 | 1.59e-05 | ||
Calcium-binding EGF-like domain; Pssm-ID: 214542 [Multi-domain] Cd Length: 39 Bit Score: 41.85 E-value: 1.59e-05
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| EGF_CA | pfam07645 | Calcium-binding EGF domain; |
325-353 | 1.48e-03 | ||
Calcium-binding EGF domain; Pssm-ID: 429571 Cd Length: 32 Bit Score: 36.06 E-value: 1.48e-03
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| EGF | smart00181 | Epidermal growth factor-like domain; |
328-359 | 7.68e-03 | ||
Epidermal growth factor-like domain; Pssm-ID: 214544 Cd Length: 35 Bit Score: 34.03 E-value: 7.68e-03
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| EGF | cd00053 | Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large ... |
328-359 | 9.72e-03 | ||
Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium. Pssm-ID: 238010 Cd Length: 36 Bit Score: 33.60 E-value: 9.72e-03
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