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Conserved domains on  [gi|1002225778|ref|XP_015623772|]
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receptor-like protein 7 [Oryza sativa Japonica Group]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 13746049)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

CATH:  3.80.10.10
Gene Ontology:  GO:0005515
PubMed:  11751054|7583641|14747988
SCOP:  4003523

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN00113 super family cl33413
leucine-rich repeat receptor-like protein kinase; Provisional
 290-965 7.71e-61

leucine-rich repeat receptor-like protein kinase; Provisional


The actual alignment was detected with superfamily member PLN00113:

Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 225.11  E-value: 7.71e-61
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  290 SNFPNLTALQLRRNDLEGFVSPLIFKHKKLVTIDLYHNpGIYGTLPN--FSSDSHLENIYVGGTEFNGIIPSsiAELKSL 367
Cdd:PLN00113    66 NNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNN-QLSGPIPDdiFTTSSSLRYLNLSNNNFTGSIPR--GSIPNL 142

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  368 KNLGLGATGFSGELPSSIGNLRSLKSLEISGFGLVGSIPSWVANLSSLTVLQFTNCGLSGSIPSSVGNLRNLGKLLLYNC 447
Cdd:PLN00113   143 ETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYN 222

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  448 SFSGKIPSQILNLTQLEILSLHSNNFIGTVEltsmwklldlfvldlsdnnlvvvdgkgnsstasiPKLGALRlsgcnvsk 527
Cdd:PLN00113   223 NLSGEIPYEIGGLTSLNHLDLVYNNLTGPIP----------------------------------SSLGNLK-------- 260

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  528 fpnflrfqdEIEYLDLSYNHIDGAIPQwawenwvkmDILSLKNnkftsvghdpflplsdMKALDLSENMFEGPIPiprgy 607
Cdd:PLN00113   261 ---------NLQYLFLYQNKLSGPIPP---------SIFSLQK----------------LISLDLSDNSLSGEIP----- 301

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  608 atvldysgnrfssipfKFTNYLSDVSFFKAGRNNFSGRIPPSFCSAMSLQLLDLSYNSFDGSIPSCLIEDvDKLEVLNLK 687
Cdd:PLN00113   302 ----------------ELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKH-NNLTVLDLS 364

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  688 ENKLRGEFPDNIKESCSFEALDFSGNLIEGKLPRSLAVCKNLEVLNIGSNQINDSFPCWMGTLRKLQVLVLKSNKFFGHV 767
Cdd:PLN00113   365 TNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI 444

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  768 aqslgeEKGTCEFQSARIVDLASNKFSGILPQEWFNKlksmmikdsnltlvmdhdlpRMEKYDFTVALTYKGMDITFTKi 847
Cdd:PLN00113   445 ------NSRKWDMPSLQMLSLARNKFFGGLPDSFGSK--------------------RLENLDLSRNQFSGAVPRKLGS- 497

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  848 LRTLVFIDLSDNAFHGSLPEAIGELVLLNVLNISHNSLTGPIPPQLGRLTQLESLDISSNELSGEIPQQLASLDFLTVLN 927
Cdd:PLN00113   498 LSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVN 577

                          650       660       670
                   ....*....|....*....|....*....|....*...
gi 1002225778  928 LSYNKLEGEIPESPHFLTFSNSSFLGNDGLCGRPLSKG 965
Cdd:PLN00113   578 ISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSG 615
PLN00113 super family cl33413
leucine-rich repeat receptor-like protein kinase; Provisional
 111-455 2.70e-27

leucine-rich repeat receptor-like protein kinase; Provisional


The actual alignment was detected with superfamily member PLN00113:

Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 119.95  E-value: 2.70e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  111 GGLDPAIFHLTSLEYLSLADNDFNGsPLPSSgFERLTELTHLSLRSTNITGVVPAGIGRLVNLVSLDLStdfeiidtfdd 190
Cdd:PLN00113   226 GEIPYEIGGLTSLNHLDLVYNNLTG-PIPSS-LGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLS----------- 292

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  191 vyvfkmNSSLDAQqlavpnLESLVANLSNLRELNLglvnLSENGARWCNALVDSCPKLQVLRLSCCALSGPICATLPRLH 270
Cdd:PLN00113   293 ------DNSLSGE------IPELVIQLQNLEILHL----FSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHN 356

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  271 SLSVIDLSFNSLPGLIPD-FSNFPNLTALQLRRNDLEGFVSPLIFKHKKLVTIDLYHN-------------PGIY----- 331
Cdd:PLN00113   357 NLTVLDLSTNNLTGEIPEgLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNsfsgelpseftklPLVYfldis 436

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  332 -----------------------------GTLPNFSSDSHLENIYVGGTEFNGIIPSSIAELKSLKNLGLGATGFSGELP 382
Cdd:PLN00113   437 nnnlqgrinsrkwdmpslqmlslarnkffGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIP 516

                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002225778  383 SSIGNLRSLKSLEISGFGLVGSIPSWVANLSSLTVLQFTNCGLSGSIPSSVGNLRNLGKLLLYNCSFSGKIPS 455
Cdd:PLN00113   517 DELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPS 589
LRRNT_2 pfam08263
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
 50-90 2.92e-04

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


:

Pssm-ID: 462411 [Multi-domain]  Cd Length: 41  Bit Score: 39.20  E-value: 2.92e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1002225778   50 PDQESPLLRLKSSFSATDmstAAFRSW-RPGTDCCRWDGVRC 90
Cdd:pfam08263    2 NDDGQALLAFKSSLNDPP---GALSSWnSSSSDPCSWTGVTC 40
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 290-965 7.71e-61

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 225.11  E-value: 7.71e-61
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  290 SNFPNLTALQLRRNDLEGFVSPLIFKHKKLVTIDLYHNpGIYGTLPN--FSSDSHLENIYVGGTEFNGIIPSsiAELKSL 367
Cdd:PLN00113    66 NNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNN-QLSGPIPDdiFTTSSSLRYLNLSNNNFTGSIPR--GSIPNL 142

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  368 KNLGLGATGFSGELPSSIGNLRSLKSLEISGFGLVGSIPSWVANLSSLTVLQFTNCGLSGSIPSSVGNLRNLGKLLLYNC 447
Cdd:PLN00113   143 ETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYN 222

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  448 SFSGKIPSQILNLTQLEILSLHSNNFIGTVEltsmwklldlfvldlsdnnlvvvdgkgnsstasiPKLGALRlsgcnvsk 527
Cdd:PLN00113   223 NLSGEIPYEIGGLTSLNHLDLVYNNLTGPIP----------------------------------SSLGNLK-------- 260

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  528 fpnflrfqdEIEYLDLSYNHIDGAIPQwawenwvkmDILSLKNnkftsvghdpflplsdMKALDLSENMFEGPIPiprgy 607
Cdd:PLN00113   261 ---------NLQYLFLYQNKLSGPIPP---------SIFSLQK----------------LISLDLSDNSLSGEIP----- 301

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  608 atvldysgnrfssipfKFTNYLSDVSFFKAGRNNFSGRIPPSFCSAMSLQLLDLSYNSFDGSIPSCLIEDvDKLEVLNLK 687
Cdd:PLN00113   302 ----------------ELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKH-NNLTVLDLS 364

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  688 ENKLRGEFPDNIKESCSFEALDFSGNLIEGKLPRSLAVCKNLEVLNIGSNQINDSFPCWMGTLRKLQVLVLKSNKFFGHV 767
Cdd:PLN00113   365 TNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI 444

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  768 aqslgeEKGTCEFQSARIVDLASNKFSGILPQEWFNKlksmmikdsnltlvmdhdlpRMEKYDFTVALTYKGMDITFTKi 847
Cdd:PLN00113   445 ------NSRKWDMPSLQMLSLARNKFFGGLPDSFGSK--------------------RLENLDLSRNQFSGAVPRKLGS- 497

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  848 LRTLVFIDLSDNAFHGSLPEAIGELVLLNVLNISHNSLTGPIPPQLGRLTQLESLDISSNELSGEIPQQLASLDFLTVLN 927
Cdd:PLN00113   498 LSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVN 577

                          650       660       670
                   ....*....|....*....|....*....|....*...
gi 1002225778  928 LSYNKLEGEIPESPHFLTFSNSSFLGNDGLCGRPLSKG 965
Cdd:PLN00113   578 ISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSG 615
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 111-455 2.70e-27

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 119.95  E-value: 2.70e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  111 GGLDPAIFHLTSLEYLSLADNDFNGsPLPSSgFERLTELTHLSLRSTNITGVVPAGIGRLVNLVSLDLStdfeiidtfdd 190
Cdd:PLN00113   226 GEIPYEIGGLTSLNHLDLVYNNLTG-PIPSS-LGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLS----------- 292

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  191 vyvfkmNSSLDAQqlavpnLESLVANLSNLRELNLglvnLSENGARWCNALVDSCPKLQVLRLSCCALSGPICATLPRLH 270
Cdd:PLN00113   293 ------DNSLSGE------IPELVIQLQNLEILHL----FSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHN 356

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  271 SLSVIDLSFNSLPGLIPD-FSNFPNLTALQLRRNDLEGFVSPLIFKHKKLVTIDLYHN-------------PGIY----- 331
Cdd:PLN00113   357 NLTVLDLSTNNLTGEIPEgLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNsfsgelpseftklPLVYfldis 436

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  332 -----------------------------GTLPNFSSDSHLENIYVGGTEFNGIIPSSIAELKSLKNLGLGATGFSGELP 382
Cdd:PLN00113   437 nnnlqgrinsrkwdmpslqmlslarnkffGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIP 516

                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002225778  383 SSIGNLRSLKSLEISGFGLVGSIPSWVANLSSLTVLQFTNCGLSGSIPSSVGNLRNLGKLLLYNCSFSGKIPS 455
Cdd:PLN00113   517 DELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPS 589
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
146-518 7.21e-19

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 90.38  E-value: 7.21e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  146 LTELTHLSLRSTNITGVVPAGIGRLVNLVSLDLSTDFEIIDTFDDVYVFKMNSSLDAQQLAVPNLESLVANLSNLRELNL 225
Cdd:COG4886     24 LILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDL 103

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  226 GlvnlsengarwCNALVDSCPKLQVLRLSCCALSGpICATLPRLHSLSVIDLSFNSLPGLIPDFSNFPNLTALQLRRNDL 305
Cdd:COG4886    104 S-----------GNEELSNLTNLESLDLSGNQLTD-LPEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQL 171

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  306 EGfVSPLIFKHKKLVTIDLYHNPgiygtlpnfssdshLENiyvggtefngiIPSSIAELKSLKNLGLGATGFSgELPSSI 385
Cdd:COG4886    172 TD-LPEELGNLTNLKELDLSNNQ--------------ITD-----------LPEPLGNLTNLEELDLSGNQLT-DLPEPL 224

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  386 GNLRSLKSLEISGFGLVgSIPsWVANLSSLTVLQFTNCGLSgSIPSSvGNLRNLGKLLLYNCSFSGKIPSQILNLTQLEI 465
Cdd:COG4886    225 ANLTNLETLDLSNNQLT-DLP-ELGNLTNLEELDLSNNQLT-DLPPL-ANLTNLKTLDLSNNQLTDLKLKELELLLGLNS 300

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1002225778  466 LSLHSNNFIGTVELTSMWKLLDLFVLDLSDNNLVVVDGKGNSSTASIPKLGAL 518
Cdd:COG4886    301 LLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLL 353
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
115-446 9.13e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 80.75  E-value: 9.13e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  115 PAIFHLTSLEYLSLADNDFngSPLPSSgFERLTELTHLSLRSTNITgVVPAGIGRLVNLVSLDLSTDfeiidtfddvyvf 194
Cdd:COG4886    107 EELSNLTNLESLDLSGNQL--TDLPEE-LANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNN------------- 169

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  195 kmnssldaqqlAVPNLESLVANLSNLRELNLG---LVNLSENgarwcnalVDSCPKLQVLRLSCCALSgPICATLPRLHS 271
Cdd:COG4886    170 -----------QLTDLPEELGNLTNLKELDLSnnqITDLPEP--------LGNLTNLEELDLSGNQLT-DLPEPLANLTN 229

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  272 LSVIDLSFNSLPGLiPDFSNFPNLTALQLRRNDLEGFvsPLIFKHKKLVTIDLYHNPgiygtlpnfSSDSHLENIYVGGT 351
Cdd:COG4886    230 LETLDLSNNQLTDL-PELGNLTNLEELDLSNNQLTDL--PPLANLTNLKTLDLSNNQ---------LTDLKLKELELLLG 297

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  352 EFNGIIPSSIAELKSLKNLGLGATGFSGELPSSIGNLRSLKSLEISGFGLVGSIPSWVANLSSLTVLQFTNCGLSGSIPS 431
Cdd:COG4886    298 LNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEA 377

                          330
                   ....*....|....*
gi 1002225778  432 SVGNLRNLGKLLLYN 446
Cdd:COG4886    378 TLLTLALLLLTLLLL 392
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 178-398 4.08e-05

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 46.96  E-value: 4.08e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  178 LSTDFEIIDTFDDVYVFKMNSSLDAQQL--------AVPNLESLVANLSNLRELNLGLVNLSENGARWCNAL--VDSCPK 247
Cdd:cd00116      3 LSLKGELLKTERATELLPKLLCLQVLRLegntlgeeAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLqgLTKGCG 82

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  248 LQVLRLSCCALSGPICATLPRLH---SLSVIDLSFNSLPGLIPDF------SNFPNLTALQLRRNDLEGF----VSPLIF 314
Cdd:cd00116     83 LQELDLSDNALGPDGCGVLESLLrssSLQELKLNNNGLGDRGLRLlakglkDLPPALEKLVLGRNRLEGAsceaLAKALR 162

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  315 KHKKLVTIDLYHN----PGIYGTLPNFSSDSHLENIYVGGTEFNGIIPSSIAE-LKSLKNL--------GLGATGFSGEL 381
Cdd:cd00116    163 ANRDLKELNLANNgigdAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAEtLASLKSLevlnlgdnNLTDAGAAALA 242

                          250
                   ....*....|....*..
gi 1002225778  382 PSSIGNLRSLKSLEISG 398
Cdd:cd00116    243 SALLSPNISLLTLSLSC 259
LRR_8 pfam13855
Leucine rich repeat;
875-933 1.01e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 40.97  E-value: 1.01e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1002225778  875 LNVLNISHNSLTGPIPPQLGRLTQLESLDISSNELSGEIPQQLASLDFLTVLNLSYNKL 933
Cdd:pfam13855    3 LRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 875-931 1.19e-04

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 44.39  E-value: 1.19e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1002225778  875 LNVLNISHNSLTGPIPpqLGRLTQLESLDISSNELS--GEIPQQLASLDFLTVLNLSYN 931
Cdd:cd21340    122 LRVLNISGNNIDSLEP--LAPLRNLEQLDASNNQISdlEELLDLLSSWPSLRELDLTGN 178
LRRNT_2 pfam08263
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
 50-90 2.92e-04

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


Pssm-ID: 462411 [Multi-domain]  Cd Length: 41  Bit Score: 39.20  E-value: 2.92e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1002225778   50 PDQESPLLRLKSSFSATDmstAAFRSW-RPGTDCCRWDGVRC 90
Cdd:pfam08263    2 NDDGQALLAFKSSLNDPP---GALSSWnSSSSDPCSWTGVTC 40
LRR_8 pfam13855
Leucine rich repeat;
246-305 3.67e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 39.43  E-value: 3.67e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002225778  246 PKLQVLRLSCCALSGPICATLPRLHSLSVIDLSFNSLPGLIPD-FSNFPNLTALQLRRNDL 305
Cdd:pfam13855    1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGaFSGLPSLRYLDLSGNRL 61
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 290-965 7.71e-61

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 225.11  E-value: 7.71e-61
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  290 SNFPNLTALQLRRNDLEGFVSPLIFKHKKLVTIDLYHNpGIYGTLPN--FSSDSHLENIYVGGTEFNGIIPSsiAELKSL 367
Cdd:PLN00113    66 NNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNN-QLSGPIPDdiFTTSSSLRYLNLSNNNFTGSIPR--GSIPNL 142

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  368 KNLGLGATGFSGELPSSIGNLRSLKSLEISGFGLVGSIPSWVANLSSLTVLQFTNCGLSGSIPSSVGNLRNLGKLLLYNC 447
Cdd:PLN00113   143 ETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYN 222

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  448 SFSGKIPSQILNLTQLEILSLHSNNFIGTVEltsmwklldlfvldlsdnnlvvvdgkgnsstasiPKLGALRlsgcnvsk 527
Cdd:PLN00113   223 NLSGEIPYEIGGLTSLNHLDLVYNNLTGPIP----------------------------------SSLGNLK-------- 260

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  528 fpnflrfqdEIEYLDLSYNHIDGAIPQwawenwvkmDILSLKNnkftsvghdpflplsdMKALDLSENMFEGPIPiprgy 607
Cdd:PLN00113   261 ---------NLQYLFLYQNKLSGPIPP---------SIFSLQK----------------LISLDLSDNSLSGEIP----- 301

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  608 atvldysgnrfssipfKFTNYLSDVSFFKAGRNNFSGRIPPSFCSAMSLQLLDLSYNSFDGSIPSCLIEDvDKLEVLNLK 687
Cdd:PLN00113   302 ----------------ELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKH-NNLTVLDLS 364

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  688 ENKLRGEFPDNIKESCSFEALDFSGNLIEGKLPRSLAVCKNLEVLNIGSNQINDSFPCWMGTLRKLQVLVLKSNKFFGHV 767
Cdd:PLN00113   365 TNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI 444

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  768 aqslgeEKGTCEFQSARIVDLASNKFSGILPQEWFNKlksmmikdsnltlvmdhdlpRMEKYDFTVALTYKGMDITFTKi 847
Cdd:PLN00113   445 ------NSRKWDMPSLQMLSLARNKFFGGLPDSFGSK--------------------RLENLDLSRNQFSGAVPRKLGS- 497

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  848 LRTLVFIDLSDNAFHGSLPEAIGELVLLNVLNISHNSLTGPIPPQLGRLTQLESLDISSNELSGEIPQQLASLDFLTVLN 927
Cdd:PLN00113   498 LSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVN 577

                          650       660       670
                   ....*....|....*....|....*....|....*...
gi 1002225778  928 LSYNKLEGEIPESPHFLTFSNSSFLGNDGLCGRPLSKG 965
Cdd:PLN00113   578 ISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSG 615
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 75-696 5.46e-58

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 216.64  E-value: 5.46e-58
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778   75 SWRPGTDCCRWDGVRCGHGDgRVTSLDLGGRQLEsrGGLDPAIFHLTSLEYLSLADNDFNGsPLPSSGFERLTELTHLSL 154
Cdd:PLN00113    50 NWNSSADVCLWQGITCNNSS-RVVSIDLSGKNIS--GKISSAIFRLPYIQTINLSNNQLSG-PIPDDIFTTSSSLRYLNL 125

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  155 RSTNITGVVPAgiGRLVNLVSLDLSTDFEIIDTFDDVYVFKMNSSLD-AQQLAVPNLESLVANLSNLRELNLGlvnlsen 233
Cdd:PLN00113   126 SNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDlGGNVLVGKIPNSLTNLTSLEFLTLA------- 196

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  234 garwCNALVDSCPK-------LQVLRLSCCALSGPICATLPRLHSLSVIDLSFNSLPGLIP-DFSNFPNLTALQLRRNDL 305
Cdd:PLN00113   197 ----SNQLVGQIPRelgqmksLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPsSLGNLKNLQYLFLYQNKL 272

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  306 EGFVSPLIFKHKKLVTIDLyhnpgiygtlpnfsSDSHLeniyvggtefNGIIPSSIAELKSLKNLGLGATGFSGELPSSI 385
Cdd:PLN00113   273 SGPIPPSIFSLQKLISLDL--------------SDNSL----------SGEIPELVIQLQNLEILHLFSNNFTGKIPVAL 328

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  386 GNLRSLKSLEISGFGLVGSIPSWVANLSSLTVLQFTNCGLSGSIPSSVGNLRNLGKLLLYNCSFSGKIPSQILNLTQLEI 465
Cdd:PLN00113   329 TSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRR 408

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  466 LSLHSNNFIGtvELTSMWKLLDL-FVLDLSDNNLvvvDGKGNSSTASIPKLGALRLSGCNVS-KFPNFLRfQDEIEYLDL 543
Cdd:PLN00113   409 VRLQDNSFSG--ELPSEFTKLPLvYFLDISNNNL---QGRINSRKWDMPSLQMLSLARNKFFgGLPDSFG-SKRLENLDL 482

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  544 SYNHIDGAIPQwawenwvkmdilslknnkftsvghdPFLPLSDMKALDLSENMFEGPIPiprgyatvldysgNRFSSIPF 623
Cdd:PLN00113   483 SRNQFSGAVPR-------------------------KLGSLSELMQLKLSENKLSGEIP-------------DELSSCKK 524

                          570       580       590       600       610       620       630
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002225778  624 KFTNYLSDvsffkagrNNFSGRIPPSFCSAMSLQLLDLSYNSFDGSIPSCLiEDVDKLEVLNLKENKLRGEFP 696
Cdd:PLN00113   525 LVSLDLSH--------NQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNL-GNVESLVQVNISHNHLHGSLP 588
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 111-455 2.70e-27

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 119.95  E-value: 2.70e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  111 GGLDPAIFHLTSLEYLSLADNDFNGsPLPSSgFERLTELTHLSLRSTNITGVVPAGIGRLVNLVSLDLStdfeiidtfdd 190
Cdd:PLN00113   226 GEIPYEIGGLTSLNHLDLVYNNLTG-PIPSS-LGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLS----------- 292

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  191 vyvfkmNSSLDAQqlavpnLESLVANLSNLRELNLglvnLSENGARWCNALVDSCPKLQVLRLSCCALSGPICATLPRLH 270
Cdd:PLN00113   293 ------DNSLSGE------IPELVIQLQNLEILHL----FSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHN 356

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  271 SLSVIDLSFNSLPGLIPD-FSNFPNLTALQLRRNDLEGFVSPLIFKHKKLVTIDLYHN-------------PGIY----- 331
Cdd:PLN00113   357 NLTVLDLSTNNLTGEIPEgLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNsfsgelpseftklPLVYfldis 436

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  332 -----------------------------GTLPNFSSDSHLENIYVGGTEFNGIIPSSIAELKSLKNLGLGATGFSGELP 382
Cdd:PLN00113   437 nnnlqgrinsrkwdmpslqmlslarnkffGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIP 516

                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002225778  383 SSIGNLRSLKSLEISGFGLVGSIPSWVANLSSLTVLQFTNCGLSGSIPSSVGNLRNLGKLLLYNCSFSGKIPS 455
Cdd:PLN00113   517 DELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPS 589
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 96-407 8.03e-21

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 98.77  E-value: 8.03e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778   96 RVTSLDLGGRQLEsrGGLDPAIFHLTSLEYLSLADNDFNGSpLPSsGFERLTELTHLSLRSTNITGVVPAGIGRLVNLVS 175
Cdd:PLN00113   285 KLISLDLSDNSLS--GEIPELVIQLQNLEILHLFSNNFTGK-IPV-ALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTV 360

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  176 LDLSTDF---EIIDTF-DDVYVFKM---NSSLDAQqlaVPnlESLVAnLSNLRELNLGLVNLSENGARWCNALvdscPKL 248
Cdd:PLN00113   361 LDLSTNNltgEIPEGLcSSGNLFKLilfSNSLEGE---IP--KSLGA-CRSLRRVRLQDNSFSGELPSEFTKL----PLV 430

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  249 QVLRLSCCALSGPICATLPRLHSLSVIDLSFNSLPGLIPDFSNFPNLTALQLRRNDLEGFVSPLIFKHKKLVTIDLYHNP 328
Cdd:PLN00113   431 YFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENK 510

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  329 gIYGTLPN-FSSDSHLENIYVGGTEFNGIIPSSIAELKSLKNLGLGATGFSGELPSSIGNLRSLKSLEISGFGLVGSIPS 407
Cdd:PLN00113   511 -LSGEIPDeLSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPS 589
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
146-518 7.21e-19

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 90.38  E-value: 7.21e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  146 LTELTHLSLRSTNITGVVPAGIGRLVNLVSLDLSTDFEIIDTFDDVYVFKMNSSLDAQQLAVPNLESLVANLSNLRELNL 225
Cdd:COG4886     24 LILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDL 103

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  226 GlvnlsengarwCNALVDSCPKLQVLRLSCCALSGpICATLPRLHSLSVIDLSFNSLPGLIPDFSNFPNLTALQLRRNDL 305
Cdd:COG4886    104 S-----------GNEELSNLTNLESLDLSGNQLTD-LPEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQL 171

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  306 EGfVSPLIFKHKKLVTIDLYHNPgiygtlpnfssdshLENiyvggtefngiIPSSIAELKSLKNLGLGATGFSgELPSSI 385
Cdd:COG4886    172 TD-LPEELGNLTNLKELDLSNNQ--------------ITD-----------LPEPLGNLTNLEELDLSGNQLT-DLPEPL 224

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  386 GNLRSLKSLEISGFGLVgSIPsWVANLSSLTVLQFTNCGLSgSIPSSvGNLRNLGKLLLYNCSFSGKIPSQILNLTQLEI 465
Cdd:COG4886    225 ANLTNLETLDLSNNQLT-DLP-ELGNLTNLEELDLSNNQLT-DLPPL-ANLTNLKTLDLSNNQLTDLKLKELELLLGLNS 300

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1002225778  466 LSLHSNNFIGTVELTSMWKLLDLFVLDLSDNNLVVVDGKGNSSTASIPKLGAL 518
Cdd:COG4886    301 LLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLL 353
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
152-498 1.70e-18

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 89.22  E-value: 1.70e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  152 LSLRSTNITGVVPAGIGRLVNLVSLDLSTDFEIIDTFDDVYVFKMNSSLDAQQLAVPNLESLVANLSNLRELNLGLVNLS 231
Cdd:COG4886      3 LLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLL 82

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  232 ENGARwCNALVDSCPKLQVLRLSCCAlsgpicaTLPRLHSLSVIDLSFNSLPGLIPDFSNFPNLTALQLRRNDLEGFVSP 311
Cdd:COG4886     83 SLLLL-GLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPEP 154

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  312 LiFKHKKLVTIDLYHNpgiygtlpNFSSdshleniyvggtefngiIPSSIAELKSLKNLGLGATGFSgELPSSIGNLRSL 391
Cdd:COG4886    155 L-GNLTNLKSLDLSNN--------QLTD-----------------LPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTNL 207

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  392 KSLEISGFGLvGSIPSWVANLSSLTVLQFTNCGLSgSIPsSVGNLRNLGKLLLYNCSFSGkIPSqILNLTQLEILSLhSN 471
Cdd:COG4886    208 EELDLSGNQL-TDLPEPLANLTNLETLDLSNNQLT-DLP-ELGNLTNLEELDLSNNQLTD-LPP-LANLTNLKTLDL-SN 281

                          330       340
                   ....*....|....*....|....*..
gi 1002225778  472 NFIGTVELTSMWKLLDLFVLDLSDNNL 498
Cdd:COG4886    282 NQLTDLKLKELELLLGLNSLLLLLLLL 308
PLN03150 PLN03150
hypothetical protein; Provisional
 837-966 2.47e-17

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 86.79  E-value: 2.47e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  837 YKGMDITFTKILRTLVF--IDLSDNAFHGSLPEAIGELVLLNVLNISHNSLTGPIPPQLGRLTQLESLDISSNELSGEIP 914
Cdd:PLN03150   404 WSGADCQFDSTKGKWFIdgLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIP 483

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1002225778  915 QQLASLDFLTVLNLSYNKLEGEIPESPHFLTFSNSS--FLGNDGLCGRPLSKGC 966
Cdd:PLN03150   484 ESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASfnFTDNAGLCGIPGLRAC 537
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
115-446 9.13e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 80.75  E-value: 9.13e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  115 PAIFHLTSLEYLSLADNDFngSPLPSSgFERLTELTHLSLRSTNITgVVPAGIGRLVNLVSLDLSTDfeiidtfddvyvf 194
Cdd:COG4886    107 EELSNLTNLESLDLSGNQL--TDLPEE-LANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNN------------- 169

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  195 kmnssldaqqlAVPNLESLVANLSNLRELNLG---LVNLSENgarwcnalVDSCPKLQVLRLSCCALSgPICATLPRLHS 271
Cdd:COG4886    170 -----------QLTDLPEELGNLTNLKELDLSnnqITDLPEP--------LGNLTNLEELDLSGNQLT-DLPEPLANLTN 229

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  272 LSVIDLSFNSLPGLiPDFSNFPNLTALQLRRNDLEGFvsPLIFKHKKLVTIDLYHNPgiygtlpnfSSDSHLENIYVGGT 351
Cdd:COG4886    230 LETLDLSNNQLTDL-PELGNLTNLEELDLSNNQLTDL--PPLANLTNLKTLDLSNNQ---------LTDLKLKELELLLG 297

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  352 EFNGIIPSSIAELKSLKNLGLGATGFSGELPSSIGNLRSLKSLEISGFGLVGSIPSWVANLSSLTVLQFTNCGLSGSIPS 431
Cdd:COG4886    298 LNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEA 377

                          330
                   ....*....|....*
gi 1002225778  432 SVGNLRNLGKLLLYN 446
Cdd:COG4886    378 TLLTLALLLLTLLLL 392
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
619-940 1.69e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 76.90  E-value: 1.69e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  619 SSIPFKFTNYLSDVSFFKAGRNNFSGRIPPSFCSAMSLQLLDLSYNSFDGSIPSCLIEDVDKLEVLNLKENKLRGEFPDN 698
Cdd:COG4886     12 LLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTD 91

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  699 IKESCSFEALDFSGNliegklpRSLAVCKNLEVLNIGSNQINDsFPCWMGTLRKLQVLVLKSNKFfghvaQSLGEEKGTC 778
Cdd:COG4886     92 LGDLTNLTELDLSGN-------EELSNLTNLESLDLSGNQLTD-LPEELANLTNLKELDLSNNQL-----TDLPEPLGNL 158

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  779 EfqSARIVDLASNKFSGIlpQEWFNKLKSmmikdsnltlvmdhdlprmekydftvaltykgmditftkiLRTLvfiDLSD 858
Cdd:COG4886    159 T--NLKSLDLSNNQLTDL--PEELGNLTN----------------------------------------LKEL---DLSN 191

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  859 NAFHgSLPEAIGELVLLNVLNISHNSLTgPIPPQLGRLTQLESLDISSNELSgEIPqQLASLDFLTVLNLSYNKLEgEIP 938
Cdd:COG4886    192 NQIT-DLPEPLGNLTNLEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQLT-DLP-ELGNLTNLEELDLSNNQLT-DLP 266


                   ..
gi 1002225778  939 ES 940
Cdd:COG4886    267 PL 268
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
655-942 1.13e-12

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 71.12  E-value: 1.13e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  655 SLQLLDLSYNSFdgsipsclIEDVDKLEVLNLKENKLRgEFPDNIKESCSFEALDFSGNLIEgKLPRSLAVCKNLEVLNI 734
Cdd:COG4886     97 NLTELDLSGNEE--------LSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDL 166

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  735 GSNQINDsFPCWMGTLRKLQVLVLKSNKFfghvaQSLGEEKGTCEfqSARIVDLASNKFSGiLPQEWFNklksmmikdsn 814
Cdd:COG4886    167 SNNQLTD-LPEELGNLTNLKELDLSNNQI-----TDLPEPLGNLT--NLEELDLSGNQLTD-LPEPLAN----------- 226

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  815 ltlvmdhdlprmekydftvaltykgmditftkiLRTLVFIDLSDNAFHgSLPEaIGELVLLNVLNISHNSLTGPipPQLG 894
Cdd:COG4886    227 ---------------------------------LTNLETLDLSNNQLT-DLPE-LGNLTNLEELDLSNNQLTDL--PPLA 269

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*...
gi 1002225778  895 RLTQLESLDISSNELSGEIPQQLASLDFLTVLNLSYNKLEGEIPESPH 942
Cdd:COG4886    270 NLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILL 317
PLN03150 PLN03150
hypothetical protein; Provisional
 370-457 3.44e-12

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 70.23  E-value: 3.44e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  370 LGLGATGFSGELPSSIGNLRSLKSLEISGFGLVGSIPSWVANLSSLTVLQFTNCGLSGSIPSSVGNLRNLGKLLLYNCSF 449
Cdd:PLN03150   423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502


                   ....*...
gi 1002225778  450 SGKIPSQI 457
Cdd:PLN03150   503 SGRVPAAL 510
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
655-974 8.45e-12

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 68.42  E-value: 8.45e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  655 SLQLLDLSYNSFDgSIPSClIEDVDKLEVLNLKENKLRgEFPDNIKESCSFEALDFSGNLIEGkLPRSLAVCKNLEVLNI 734
Cdd:COG4886    114 NLESLDLSGNQLT-DLPEE-LANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDL 189

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  735 GSNQINDsFPCWMGTLRKLQVLVLKSNKFfghvaQSLGEEKGTCefQSARIVDLASNKFSGILPQEWFNKLKSMMIKDSN 814
Cdd:COG4886    190 SNNQITD-LPEPLGNLTNLEELDLSGNQL-----TDLPEPLANL--TNLETLDLSNNQLTDLPELGNLTNLEELDLSNNQ 261

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  815 LTlvmdhdlprmekydftvaltykgmDITFTKILRTLVFIDLSDNAFHGSLPEAIGELVLLNVLNISHNSLTGPIPPQLG 894
Cdd:COG4886    262 LT------------------------DLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILL 317

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  895 RLTQLESLDISSNELSGEIPQQLASLDFLTVLNLSYNKLEGEIPESPHFLTFSNSSFLGNDGLCGRPLSKGCINITSLNV 974
Cdd:COG4886    318 LLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTT 397
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
442-903 1.74e-11

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 67.27  E-value: 1.74e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  442 LLLYNCSFSGKIPSQILNLTQLEILSLHSNNFIGTVELTSMWKLLDLFVLDLSDNNLVVVDGKGNSSTASIPKLGALRLS 521
Cdd:COG4886      2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  522 GCNVSKFPNFLRFQDEIEYLDLSYNhidgaipqwawenwvkmdilslknnkftsvghDPFLPLSDMKALDLsenmfegpi 601
Cdd:COG4886     82 LSLLLLGLTDLGDLTNLTELDLSGN--------------------------------EELSNLTNLESLDL--------- 120

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  602 piprgyatvldySGNRFSSIPFKFTNyLSDVSFFKAGRNNFSgRIPPSFCSAMSLQLLDLSYNSFDgSIPScLIEDVDKL 681
Cdd:COG4886    121 ------------SGNQLTDLPEELAN-LTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQLT-DLPE-ELGNLTNL 184

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  682 EVLNLKENKLRgEFPDNIKESCSFEALDFSGNLIEgKLPRSLAVCKNLEVLNIGSNQINDsFPcWMGTLRKLQVLVLKSN 761
Cdd:COG4886    185 KELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQLTD-LP-ELGNLTNLEELDLSNN 260

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  762 KFfghvaQSLGEEKgtcEFQSARIVDLASNKFSGILPQEWFNKLKSMMIKDSNLTLVMDHDLPRMEKYDFTVALTYKGMD 841
Cdd:COG4886    261 QL-----TDLPPLA---NLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKG 332

                          410       420       430       440       450       460
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1002225778  842 ITFTKILRTLVFIDLSDNAFHGSLPEAIGELVLLNVLNISHNSLTGPIPPQLGRLTQLESLD 903
Cdd:COG4886    333 LLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLL 394
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
404-856 1.19e-10

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 64.95  E-value: 1.19e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  404 SIPSWVANLSSLTVLQFTNCGLSGSIPSSVGNLRNLGKLLLYNCSFSGKIPSQILNLTQLEILSLHSNNFIGTVELTSMW 483
Cdd:COG4886     14 LLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLG 93

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  484 KLLDLFVLDLSDNNLVvvdgkgnsstASIPKLGALRLSGCNVSKFPNFLRFQDEIEYLDLSYNHIDgAIPQwAWENWVKM 563
Cdd:COG4886     94 DLTNLTELDLSGNEEL----------SNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLT-DLPE-PLGNLTNL 161

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  564 DILSLKNNKFTSVGHdpflPLSDMKALdlsenmfegpipiprgyaTVLDYSGNRFSSIPFKFTNyLSDVSFFKAGRNNFS 643
Cdd:COG4886    162 KSLDLSNNQLTDLPE----ELGNLTNL------------------KELDLSNNQITDLPEPLGN-LTNLEELDLSGNQLT 218

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  644 gRIPPSFCSAMSLQLLDLSYNSFDgSIPSclIEDVDKLEVLNLKENKLRGefpdnikescsfeaLDFSGNLiegklprsl 723
Cdd:COG4886    219 -DLPEPLANLTNLETLDLSNNQLT-DLPE--LGNLTNLEELDLSNNQLTD--------------LPPLANL--------- 271

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  724 avcKNLEVLNIGSNQINDSFPCWMGTLRKLQVLVLKSNKFFGHVAQSLGEEKGTCEFQSARIVDLASNKFSGILPQEWFN 803
Cdd:COG4886    272 ---TNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLA 348

                          410       420       430       440       450
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1002225778  804 KLKSMMIKDSNLTLVMDHDLPRMEKYDFTVALTYKGMDITFTKILRTLVFIDL 856
Cdd:COG4886    349 LLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVL 401
PLN03150 PLN03150
hypothetical protein; Provisional
 355-434 2.27e-10

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 64.45  E-value: 2.27e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  355 GIIPSSIAELKSLKNLGLGATGFSGELPSSIGNLRSLKSLEISGFGLVGSIPSWVANLSSLTVLQFTNCGLSGSIPSSVG 434
Cdd:PLN03150   432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALG 511
PLN03150 PLN03150
hypothetical protein; Provisional
 684-772 2.46e-10

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 64.45  E-value: 2.46e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  684 LNLKENKLRGEFPDNIKESCSFEALDFSGNLIEGKLPRSLAVCKNLEVLNIGSNQINDSFPCWMGTLRKLQVLVLKSNKF 763
Cdd:PLN03150   423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502


                   ....*....
gi 1002225778  764 FGHVAQSLG 772
Cdd:PLN03150   503 SGRVPAALG 511
PLN03150 PLN03150
hypothetical protein; Provisional
 640-696 1.22e-09

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 62.14  E-value: 1.22e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1002225778  640 NNFSGRIPPSFCSAMSLQLLDLSYNSFDGSIPSCLIEdVDKLEVLNLKENKLRGEFP 696
Cdd:PLN03150   452 NSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQ-LTSLRILNLNGNSLSGRVP 507
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
98-381 1.24e-09

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 61.49  E-value: 1.24e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778   98 TSLDLGGRQLESrggLDPAIFHLTSLEYLSLADNDFNGspLPSSgFERLTELTHLSLRSTNITgVVPAGIGRLVNLVSLD 177
Cdd:COG4886    139 KELDLSNNQLTD---LPEPLGNLTNLKSLDLSNNQLTD--LPEE-LGNLTNLKELDLSNNQIT-DLPEPLGNLTNLEELD 211

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  178 LStdfeiidtfddvyvfkmNSSLDaqqlavpNLESLVANLSNLRELnlglvNLSENGARWCNALvDSCPKLQVLRLSCCA 257
Cdd:COG4886    212 LS-----------------GNQLT-------DLPEPLANLTNLETL-----DLSNNQLTDLPEL-GNLTNLEELDLSNNQ 261

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  258 LSG-PICATLPRLHSLsviDLSFNSLPGL----IPDFSNFPNLTALQLRRNDLEGFVSPLIFKHKKLVTIDLYHNPGIYG 332
Cdd:COG4886    262 LTDlPPLANLTNLKTL---DLSNNQLTDLklkeLELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLT 338

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*....
gi 1002225778  333 TLPNFSSDSHLENIYVGGTEFNGIIPSSIAELKSLKNLGLGATGFSGEL 381
Cdd:COG4886    339 TLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLL 387
PLN03150 PLN03150
hypothetical protein; Provisional
 327-427 2.08e-09

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 61.37  E-value: 2.08e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  327 NPGIYGTLPN-FSSDSHLENIYVGGTEFNGIIPSSIAELKSLKNLGLGATGFSGELPSSIGNLRSLKSLEISGFGLVGSI 405
Cdd:PLN03150   427 NQGLRGFIPNdISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506

                           90       100
                   ....*....|....*....|....*..
gi 1002225778  406 PSWV-ANLSSLTVLQFTN----CGLSG 427
Cdd:PLN03150   507 PAALgGRLLHRASFNFTDnaglCGIPG 533
PLN03150 PLN03150
hypothetical protein; Provisional
 275-386 2.18e-07

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 54.82  E-value: 2.18e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  275 IDLSFNSLPGLIP-DFSNFPNLTALQLRRNDLEGFVSPLIFKHKKLVTIDLYHNpgiygtlpnfssdshleniyvggtEF 353
Cdd:PLN03150   423 LGLDNQGLRGFIPnDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYN------------------------SF 478

                           90       100       110
                   ....*....|....*....|....*....|...
gi 1002225778  354 NGIIPSSIAELKSLKNLGLGATGFSGELPSSIG 386
Cdd:PLN03150   479 NGSIPESLGQLTSLRILNLNGNSLSGRVPAALG 511
PLN03150 PLN03150
hypothetical protein; Provisional
 400-477 1.38e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 52.13  E-value: 1.38e-06
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1002225778  400 GLVGSIPSWVANLSSLTVLQFTNCGLSGSIPSSVGNLRNLGKLLLYNCSFSGKIPSQILNLTQLEILSLHSNNFIGTV 477
Cdd:PLN03150   429 GLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 97-305 1.70e-06

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 52.16  E-value: 1.70e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778   97 VTSLDLGGRQLEsrGGLDPAIFHLTSLEYLSLADNDFNGSPLPSSGFERLTeltHLSLRSTNITGVVPAGIGRLVNLVSL 176
Cdd:PLN00113   430 VYFLDISNNNLQ--GRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLE---NLDLSRNQFSGAVPRKLGSLSELMQL 504

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  177 DLSTDfeiidtfddvyvfKMNSSldaqqlaVPNLESLVANLSNLrelnlglvNLSENgaRWCNALVDSCPKLQVLR---L 253
Cdd:PLN00113   505 KLSEN-------------KLSGE-------IPDELSSCKKLVSL--------DLSHN--QLSGQIPASFSEMPVLSqldL 554

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1002225778  254 SCCALSGPICATLPRLHSLSVIDLSFNSLPGLIPDFSNFPNLTALQLRRNDL 305
Cdd:PLN00113   555 SQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNID 606
PLN03150 PLN03150
hypothetical protein; Provisional
 418-498 4.06e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 50.97  E-value: 4.06e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  418 LQFTNCGLSGSIPSSVGNLRNLGKLLLYNCSFSGKIPSQILNLTQLEILSLHSNNFIGTVElTSMWKLLDLFVLDLSDNN 497
Cdd:PLN03150   423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIP-ESLGQLTSLRILNLNGNS 501


                   .
gi 1002225778  498 L 498
Cdd:PLN03150   502 L 502
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
778-940 5.12e-06

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 49.93  E-value: 5.12e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  778 CEFQSARIVDLASNKFSGILPQEWFNKLKSMMIKDSNLTLVMDHDLPRMEKYDFTVALTYKGMDITFTKILRTLVFIDLS 857
Cdd:COG4886      1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  858 DNAFHGSLPEAIGELVLLNVLNISHNsltgpipPQLGRLTQLESLDISSNELSgEIPQQLASLDFLTVLNLSYNKLEgEI 937
Cdd:COG4886     81 LLSLLLLGLTDLGDLTNLTELDLSGN-------EELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DL 151


                   ...
gi 1002225778  938 PES 940
Cdd:COG4886    152 PEP 154
PLN03150 PLN03150
hypothetical protein; Provisional
 659-748 7.46e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 49.81  E-value: 7.46e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  659 LDLSYNSFDGSIPSClIEDVDKLEVLNLKENKLRGEFPDNIKESCSFEALDFSGNLIEGKLPRSLAVCKNLEVLNIGSNQ 738
Cdd:PLN03150   423 LGLDNQGLRGFIPND-ISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501

                           90
                   ....*....|
gi 1002225778  739 INDSFPCWMG 748
Cdd:PLN03150   502 LSGRVPAALG 511
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 178-398 4.08e-05

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 46.96  E-value: 4.08e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  178 LSTDFEIIDTFDDVYVFKMNSSLDAQQL--------AVPNLESLVANLSNLRELNLGLVNLSENGARWCNAL--VDSCPK 247
Cdd:cd00116      3 LSLKGELLKTERATELLPKLLCLQVLRLegntlgeeAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLqgLTKGCG 82

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  248 LQVLRLSCCALSGPICATLPRLH---SLSVIDLSFNSLPGLIPDF------SNFPNLTALQLRRNDLEGF----VSPLIF 314
Cdd:cd00116     83 LQELDLSDNALGPDGCGVLESLLrssSLQELKLNNNGLGDRGLRLlakglkDLPPALEKLVLGRNRLEGAsceaLAKALR 162

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  315 KHKKLVTIDLYHN----PGIYGTLPNFSSDSHLENIYVGGTEFNGIIPSSIAE-LKSLKNL--------GLGATGFSGEL 381
Cdd:cd00116    163 ANRDLKELNLANNgigdAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAEtLASLKSLevlnlgdnNLTDAGAAALA 242

                          250
                   ....*....|....*..
gi 1002225778  382 PSSIGNLRSLKSLEISG 398
Cdd:cd00116    243 SALLSPNISLLTLSLSC 259
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 96-282 8.12e-05

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 45.81  E-value: 8.12e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778   96 RVTSLDLGGRQLESRG--GLDPAIFHLTSLEYLSLADNDFNGSplpssGFERLTE-LTHLSlrstnitgvvpagigrlvN 172
Cdd:cd00116    138 ALEKLVLGRNRLEGASceALAKALRANRDLKELNLANNGIGDA-----GIRALAEgLKANC------------------N 194

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  173 LVSLDLS----TDFEIIDtfddvyvfkmnssldaqqlavpnLESLVANLSNLRELNLGLVNLSENGAR-WCNALVDSCPK 247
Cdd:cd00116    195 LEVLDLNnnglTDEGASA-----------------------LAETLASLKSLEVLNLGDNNLTDAGAAaLASALLSPNIS 251

                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1002225778  248 LQVLRLSCCAL----SGPICATLPRLHSLSVIDLSFNSL 282
Cdd:cd00116    252 LLTLSLSCNDItddgAKDLAEVLAEKESLLELDLRGNKF 290
LRR_8 pfam13855
Leucine rich repeat;
875-933 1.01e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 40.97  E-value: 1.01e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1002225778  875 LNVLNISHNSLTGPIPPQLGRLTQLESLDISSNELSGEIPQQLASLDFLTVLNLSYNKL 933
Cdd:pfam13855    3 LRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 875-931 1.19e-04

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 44.39  E-value: 1.19e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1002225778  875 LNVLNISHNSLTGPIPpqLGRLTQLESLDISSNELS--GEIPQQLASLDFLTVLNLSYN 931
Cdd:cd21340    122 LRVLNISGNNIDSLEP--LAPLRNLEQLDASNNQISdlEELLDLLSSWPSLRELDLTGN 178
RNA1 COG5238
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ...
 94-327 2.73e-04

Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444072 [Multi-domain]  Cd Length: 434  Bit Score: 44.78  E-value: 2.73e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778   94 DGRVTSLDLGGRQLESRG--GLDPAIFHLTSLEYLSLADNDF--NGSPLPSSGFERLTELTHLSLRSTNIT--GVVpaGI 167
Cdd:COG5238    179 NNSVETVYLGCNQIGDEGieELAEALTQNTTVTTLWLKRNPIgdEGAEILAEALKGNKSLTTLDLSNNQIGdeGVI--AL 256

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  168 GRLV----NLVSLDLStdfeiidtfddvyvfkMNSsLDAQQLAVpnLESLVANLSNLRELNLGLVNLSENGARwcnALVD 243
Cdd:COG5238    257 AEALknntTVETLYLS----------------GNQ-IGAEGAIA--LAKALQGNTTLTSLDLSVNRIGDEGAI---ALAE 314

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  244 SCPK---LQVLRLSCCALSG----PICATLPRLHSLSVIDLSFNSLP-----GLIPDFSNFPNLTALQLRRNDL--EGFV 309
Cdd:COG5238    315 GLQGnktLHTLNLAYNGIGAqgaiALAKALQENTTLHSLDLSDNQIGdegaiALAKYLEGNTTLRELNLGKNNIgkQGAE 394

                          250       260
                   ....*....|....*....|
gi 1002225778  310 SpLI--FKHKKLVTIDLYHN 327
Cdd:COG5238    395 A-LIdaLQTNRLHTLILDGN 413
LRRNT_2 pfam08263
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
 50-90 2.92e-04

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


Pssm-ID: 462411 [Multi-domain]  Cd Length: 41  Bit Score: 39.20  E-value: 2.92e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1002225778   50 PDQESPLLRLKSSFSATDmstAAFRSW-RPGTDCCRWDGVRC 90
Cdd:pfam08263    2 NDDGQALLAFKSSLNDPP---GALSSWnSSSSDPCSWTGVTC 40
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 343-705 3.23e-04

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 44.87  E-value: 3.23e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  343 LENIYVGGTEFNGIIPS-SIAelKSLKNLGLGATGFSGELPSSIGNLRSLKSLEISGFGLVGSIPSWVaNLSSLTVLQFT 421
Cdd:PLN03210   636 LRNIDLRGSKNLKEIPDlSMA--TNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLS 712

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  422 NCGLSGSIPSSVGN-------------------LRNLGKLLLYNCSfSGKIPSQILNLTQLEILSLHS------NNFIGT 476
Cdd:PLN03210   713 GCSRLKSFPDISTNiswldldetaieefpsnlrLENLDELILCEMK-SEKLWERVQPLTPLMTMLSPSltrlflSDIPSL 791

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  477 VEL-TSMWKLLDLFVLDLSD-NNLVVVdgkgnSSTASIPKLGALRLSGCnvSKFPNFLRFQDEIEYLDLSYNHIDgAIPQ 554
Cdd:PLN03210   792 VELpSSIQNLHKLEHLEIENcINLETL-----PTGINLESLESLDLSGC--SRLRTFPDISTNISDLNLSRTGIE-EVPW 863

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  555 WAwENWVKMDILSL-KNNKFTSVGhdpfLPLSDMKALD---------LSENMFEGpipIPRGYATVLDYSGNRF-SSIPF 623
Cdd:PLN03210   864 WI-EKFSNLSFLDMnGCNNLQRVS----LNISKLKHLEtvdfsdcgaLTEASWNG---SPSEVAMATDNIHSKLpSTVCI 935

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  624 KFTNY--------LSDVSFFKAGRnnFSGRIPPSF-------CSAMSLQLLDLSYNSFDGSIPSCLIEDVDKLEVlnlke 688
Cdd:PLN03210   936 NFINCfnldqealLQQQSIFKQLI--LSGEEVPSYfthrttgASLTNIPLLHISPCQPFFRFRACAVVDSESFFI----- 1008

                          410
                   ....*....|....*..
gi 1002225778  689 nklrGEFPDNIKESCSF 705
Cdd:PLN03210  1009 ----ISVSFDIQVCCRF 1021
LRR_8 pfam13855
Leucine rich repeat;
246-305 3.67e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 39.43  E-value: 3.67e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002225778  246 PKLQVLRLSCCALSGPICATLPRLHSLSVIDLSFNSLPGLIPD-FSNFPNLTALQLRRNDL 305
Cdd:pfam13855    1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGaFSGLPSLRYLDLSGNRL 61
PLN03150 PLN03150
hypothetical protein; Provisional
 559-674 4.62e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 44.04  E-value: 4.62e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  559 NWVkMDILSLKNNKFTSVGHDPFLPLSDMKALDLSENMFEGPIPIPRGYAT---VLDYSGNRFSsipfkftnylsdvsff 635
Cdd:PLN03150   417 KWF-IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITsleVLDLSYNSFN---------------- 479

                           90       100       110
                   ....*....|....*....|....*....|....*....
gi 1002225778  636 kagrnnfsGRIPPSFCSAMSLQLLDLSYNSFDGSIPSCL 674
Cdd:PLN03150   480 --------GSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510
PLN03150 PLN03150
hypothetical protein; Provisional
 99-168 9.00e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 43.27  E-value: 9.00e-04
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778   99 SLDLGGRQLesRGGLDPAIFHLTSLEYLSLADNDFNGSpLPSSgFERLTELTHLSLRSTNITGVVPAGIG 168
Cdd:PLN03150   446 SINLSGNSI--RGNIPPSLGSITSLEVLDLSYNSFNGS-IPES-LGQLTSLRILNLNGNSLSGRVPAALG 511
PLN03150 PLN03150
hypothetical protein; Provisional
 247-309 9.55e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 43.27  E-value: 9.55e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1002225778  247 KLQVLRLSCCALSGPICATLPRLHSLSVIDLSFNSLPGLIPD-FSNFPNLTALQLRRNDLEGFV 309
Cdd:PLN03150   443 HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPEsLGQLTSLRILNLNGNSLSGRV 506
LRR_8 pfam13855
Leucine rich repeat;
121-179 1.74e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 37.50  E-value: 1.74e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1002225778  121 TSLEYLSLADNDFNGspLPSSGFERLTELTHLSLRSTNITGVVPAGIGRLVNLVSLDLS 179
Cdd:pfam13855    1 PNLRSLDLSNNRLTS--LDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLS 57
RNA1 COG5238
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ...
 846-936 2.18e-03

Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444072 [Multi-domain]  Cd Length: 434  Bit Score: 41.70  E-value: 2.18e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002225778  846 KILRTLvfiDLSDNAFHGSLPEAIGELVLLN----VLNISHNSLTGP----IPPQLGRLTQLESLDISSNELSGE----I 913
Cdd:COG5238    236 KSLTTL---DLSNNQIGDEGVIALAEALKNNttveTLYLSGNQIGAEgaiaLAKALQGNTTLTSLDLSVNRIGDEgaiaL 312

                           90       100
                   ....*....|....*....|...
gi 1002225778  914 PQQLASLDFLTVLNLSYNKLEGE 936
Cdd:COG5238    313 AEGLQGNKTLHTLNLAYNGIGAQ 335
LRR_8 pfam13855
Leucine rich repeat;
849-909 9.35e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 35.58  E-value: 9.35e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002225778  849 RTLVFIDLSDNAFHGSLPEAIGELVLLNVLNISHNSLTGPIPPQLGRLTQLESLDISSNEL 909
Cdd:pfam13855    1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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