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ethylene-responsive transcription factor ERF109 [Oryza sativa Japonica Group]
AP2/ERF family transcription factor( domain architecture ID 10647620)
AP2/ERF family transcription factor binds to the GCC-box pathogenesis-related promoter element; similar to Arabidopsis thaliana ethylene-responsive transcription factors and dehydration-responsive element-binding proteins
List of domain hits
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Name | Accession | Description | Interval | E-value | ||
AP2 | smart00380 | DNA-binding domain in plant proteins such as APETALA2 and EREBPs; |
121-184 | 6.37e-32 | ||
DNA-binding domain in plant proteins such as APETALA2 and EREBPs; : Pssm-ID: 197689 Cd Length: 64 Bit Score: 111.59 E-value: 6.37e-32
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Name | Accession | Description | Interval | E-value | ||
AP2 | smart00380 | DNA-binding domain in plant proteins such as APETALA2 and EREBPs; |
121-184 | 6.37e-32 | ||
DNA-binding domain in plant proteins such as APETALA2 and EREBPs; Pssm-ID: 197689 Cd Length: 64 Bit Score: 111.59 E-value: 6.37e-32
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AP2 | cd00018 | DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP ... |
120-180 | 1.28e-29 | ||
DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1, which is involved in stress response, contain a single copy of the AP2 domain. APETALA2-like proteins, which play a role in plant development contain two copies. Pssm-ID: 237985 Cd Length: 61 Bit Score: 105.43 E-value: 1.28e-29
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AP2 | pfam00847 | AP2 domain; This 60 amino acid residue domain can bind to DNA and is found in transcription ... |
121-170 | 1.10e-09 | ||
AP2 domain; This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins. Pssm-ID: 425904 Cd Length: 52 Bit Score: 52.63 E-value: 1.10e-09
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Name | Accession | Description | Interval | E-value | ||
AP2 | smart00380 | DNA-binding domain in plant proteins such as APETALA2 and EREBPs; |
121-184 | 6.37e-32 | ||
DNA-binding domain in plant proteins such as APETALA2 and EREBPs; Pssm-ID: 197689 Cd Length: 64 Bit Score: 111.59 E-value: 6.37e-32
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AP2 | cd00018 | DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP ... |
120-180 | 1.28e-29 | ||
DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1, which is involved in stress response, contain a single copy of the AP2 domain. APETALA2-like proteins, which play a role in plant development contain two copies. Pssm-ID: 237985 Cd Length: 61 Bit Score: 105.43 E-value: 1.28e-29
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AP2 | pfam00847 | AP2 domain; This 60 amino acid residue domain can bind to DNA and is found in transcription ... |
121-170 | 1.10e-09 | ||
AP2 domain; This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins. Pssm-ID: 425904 Cd Length: 52 Bit Score: 52.63 E-value: 1.10e-09
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Blast search parameters | ||||
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