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Conserved domains on  [gi|1002241316|ref|XP_015624954|]
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auxin-responsive protein SAUR50 [Oryza sativa Japonica Group]

Protein Classification

SAUR-like auxin-responsive family protein( domain architecture ID 581161)

SAUR-like auxin-responsive family protein similar to Arabidopsis thaliana SAUR proteins that may provide a mechanistic link between auxin and plasma membrane H(+)-ATPases (PM H(+)-ATPases)

Gene Ontology:  GO:0009733

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN03090 super family cl23790
auxin-responsive family protein; Provisional
 1-95 4.95e-35

auxin-responsive family protein; Provisional


The actual alignment was detected with superfamily member PLN03090:

Pssm-ID: 474056  Cd Length: 104  Bit Score: 115.64  E-value: 4.95e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002241316   1 MAITGSKKPGQ---LKQMLRRCSSslGIKGAGGDDDGLPGDVPRGHFAVYVGISRRRYIVPVACLAAPEFQELLRKAEEE 77
Cdd:PLN03090    1 MAIKKSNKLTQtamLKQILKRCSS--LGKKQGYDEDGLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEEE 78

                          90
                  ....*....|....*...
gi 1002241316  78 FGFDHDMGITLPCDEATF 95
Cdd:PLN03090   79 FGFDHDMGLTIPCEEVVF 96
 
Name Accession Description Interval E-value
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 1-95 4.95e-35

auxin-responsive family protein; Provisional


Pssm-ID: 178639  Cd Length: 104  Bit Score: 115.64  E-value: 4.95e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002241316   1 MAITGSKKPGQ---LKQMLRRCSSslGIKGAGGDDDGLPGDVPRGHFAVYVGISRRRYIVPVACLAAPEFQELLRKAEEE 77
Cdd:PLN03090    1 MAIKKSNKLTQtamLKQILKRCSS--LGKKQGYDEDGLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEEE 78

                          90
                  ....*....|....*...
gi 1002241316  78 FGFDHDMGITLPCDEATF 95
Cdd:PLN03090   79 FGFDHDMGLTIPCEEVVF 96
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 12-95 2.96e-29

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 100.79  E-value: 2.96e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002241316  12 LKQMLRRCSSSLGIKGAGGDDDGLPGD---VPRGHFAVYVGISRRRYIVPVACLAAPEFQELLRKAEEEFGFDHDMGITL 88
Cdd:pfam02519   1 LKQMARKWQKRAALGRKRISSPRTTSSsdvPEKGHFVVYVGDERRRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGPITL 80


                  ....*..
gi 1002241316  89 PCDEATF 95
Cdd:pfam02519  81 PCDVVVF 87
 
Name Accession Description Interval E-value
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 1-95 4.95e-35

auxin-responsive family protein; Provisional


Pssm-ID: 178639  Cd Length: 104  Bit Score: 115.64  E-value: 4.95e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002241316   1 MAITGSKKPGQ---LKQMLRRCSSslGIKGAGGDDDGLPGDVPRGHFAVYVGISRRRYIVPVACLAAPEFQELLRKAEEE 77
Cdd:PLN03090    1 MAIKKSNKLTQtamLKQILKRCSS--LGKKQGYDEDGLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEEE 78

                          90
                  ....*....|....*...
gi 1002241316  78 FGFDHDMGITLPCDEATF 95
Cdd:PLN03090   79 FGFDHDMGLTIPCEEVVF 96
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 12-95 2.96e-29

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 100.79  E-value: 2.96e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002241316  12 LKQMLRRCSSSLGIKGAGGDDDGLPGD---VPRGHFAVYVGISRRRYIVPVACLAAPEFQELLRKAEEEFGFDHDMGITL 88
Cdd:pfam02519   1 LKQMARKWQKRAALGRKRISSPRTTSSsdvPEKGHFVVYVGDERRRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGPITL 80


                  ....*..
gi 1002241316  89 PCDEATF 95
Cdd:pfam02519  81 PCDVVVF 87
PLN03220 PLN03220
uncharacterized protein; Provisional
 39-101 3.63e-19

uncharacterized protein; Provisional


Pssm-ID: 178759  Cd Length: 105  Bit Score: 75.55  E-value: 3.63e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1002241316  39 VPRGHFAVYVG----ISRRRYIVPVACLAAPEFQELLRKAEEEFGFDHDM-GITLPCDEATFHGVLAS 101
Cdd:PLN03220   35 VPKGHVAVYVGeqieMEKKRFVVPISFLNHPSFKEFLSRAEEEFGFNHPMgGLTIPCREEVFLDLIAS 102
PLN03219 PLN03219
uncharacterized protein; Provisional
 39-101 6.72e-17

uncharacterized protein; Provisional


Pssm-ID: 178758 [Multi-domain]  Cd Length: 108  Bit Score: 69.78  E-value: 6.72e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1002241316  39 VPRGHFAVYVG--ISRRRYIVPVACLAAPEFQELLRKAEEEFGFDHDM-GITLPCDEATFHGVLAS 101
Cdd:PLN03219   39 VPKGHVAVYVGeqMEKKRFVVPISYLNHPLFREFLNRAEEECGFHHSMgGLTIPCREESFLHLITS 104
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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