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Conserved domains on  [gi|1002258149|ref|XP_015633404|]
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dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1 [Oryza sativa Japonica Group]

Protein Classification

glycosyltransferase family protein( domain architecture ID 229536)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PMT_2 super family cl21590
Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are ...
 20-381 1.56e-28

Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are not captured by pfam02366.


The actual alignment was detected with superfamily member pfam03901:

Pssm-ID: 473917  Cd Length: 414  Bit Score: 117.08  E-value: 1.56e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002258149  20 LLLGSIAAFYAVMVPYTKVEESFNVQAMHDILYHNYHIEKYDHLEFPGVVPRSFIgalvvSVISSPAVFVMHLCHVPKVY 99
Cdd:pfam03901   4 LLLLALRLLLALLVQTSDPDEHFQSWEPLHYLIFGYGFLTWEWSPKYGIRSYLYP-----LLFALPYYLLARLFGDSKYL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002258149 100 GLLAVRIVLGSI-ILMTLRLLRVqfisdiqVKRKFGHHAEAFYLILTATQFHLLFYSTRPLPNVLALAFVNLTYYFW--- 175
Cdd:pfam03901  79 VFYAPRLLLGLFsALCDYYLYRA-------VCRKYGLEIARWALLLSLTSWGMFFASTRTLPNSFEMILTSIALYYLley 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002258149 176 -----FKGNHRRTLQALIVAAVIFRCDMILLLGTIGLALLLSRSISLLEAIKC-----CVSTAIICIGFTVLVDSILWRR 245
Cdd:pfam03901 152 gntsvSNYKYLKAVLLIAALAILGRPTSALLWLPLVLYLLLRLRGKRLKLFLFlaislGLLVALLVLGAVILIDSYFYGR 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002258149 246 ILWPEFEVLWFNSVLNRSSEWGTHSIHWYFTSALPRSMLVAYPLCMVGALLDR-----RIVPYILPVFSFVVLYSKLPHK 320
Cdd:pfam03901 232 FVFTPLNFLKYNVLSNGSSFYGTHPWYFYFSNGLPNILGPFLLAFILGPLVLLlrkvsRLSQLLAPILIWLFIYSLQPHK 311

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002258149 321 ELRFIMASIPMLNVSASLAASRIYNNRkktgWKLLYVLMIGGFLSSLGYSGVTFMASYNNY 381
Cdd:pfam03901 312 EERFLYPVYPLILLSAAIALTRLSRRS----WKVRKKLSLLFLLLFFNVSLARLFGLVHQY 368
 
Name Accession Description Interval E-value
Glyco_transf_22 pfam03901
Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. ...
 20-381 1.56e-28

Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. At least some members are localized in endoplasmic reticulum and involved in GPI anchor biosynthesis.


Pssm-ID: 281842  Cd Length: 414  Bit Score: 117.08  E-value: 1.56e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002258149  20 LLLGSIAAFYAVMVPYTKVEESFNVQAMHDILYHNYHIEKYDHLEFPGVVPRSFIgalvvSVISSPAVFVMHLCHVPKVY 99
Cdd:pfam03901   4 LLLLALRLLLALLVQTSDPDEHFQSWEPLHYLIFGYGFLTWEWSPKYGIRSYLYP-----LLFALPYYLLARLFGDSKYL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002258149 100 GLLAVRIVLGSI-ILMTLRLLRVqfisdiqVKRKFGHHAEAFYLILTATQFHLLFYSTRPLPNVLALAFVNLTYYFW--- 175
Cdd:pfam03901  79 VFYAPRLLLGLFsALCDYYLYRA-------VCRKYGLEIARWALLLSLTSWGMFFASTRTLPNSFEMILTSIALYYLley 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002258149 176 -----FKGNHRRTLQALIVAAVIFRCDMILLLGTIGLALLLSRSISLLEAIKC-----CVSTAIICIGFTVLVDSILWRR 245
Cdd:pfam03901 152 gntsvSNYKYLKAVLLIAALAILGRPTSALLWLPLVLYLLLRLRGKRLKLFLFlaislGLLVALLVLGAVILIDSYFYGR 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002258149 246 ILWPEFEVLWFNSVLNRSSEWGTHSIHWYFTSALPRSMLVAYPLCMVGALLDR-----RIVPYILPVFSFVVLYSKLPHK 320
Cdd:pfam03901 232 FVFTPLNFLKYNVLSNGSSFYGTHPWYFYFSNGLPNILGPFLLAFILGPLVLLlrkvsRLSQLLAPILIWLFIYSLQPHK 311

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002258149 321 ELRFIMASIPMLNVSASLAASRIYNNRkktgWKLLYVLMIGGFLSSLGYSGVTFMASYNNY 381
Cdd:pfam03901 312 EERFLYPVYPLILLSAAIALTRLSRRS----WKVRKKLSLLFLLLFFNVSLARLFGLVHQY 368
PLN02816 PLN02816
mannosyltransferase
 230-331 7.59e-06

mannosyltransferase


Pssm-ID: 215437  Cd Length: 546  Bit Score: 48.49  E-value: 7.59e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002258149 230 ICIGFTVLVDSILWRRILWPEFEVLWFNSVLNRSSEWGTHSIHWYFTSALPRSMLVAYPLCMVGAL--LDRRIVPYILPV 307
Cdd:PLN02816  249 LVLGFTCLLDRLMYGSWVIVPLNFLKFNFLSSGGDYYGTHPWHWYFTQGFLVMLFTFTPFSIAGIIksKNQKLSALILWV 328

                          90       100
                  ....*....|....*....|....
gi 1002258149 308 FSfvvLYSKLPHKELRFIMASIPM 331
Cdd:PLN02816  329 LA---IYSILGHKEFRFVLPVLPI 349
 
Name Accession Description Interval E-value
Glyco_transf_22 pfam03901
Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. ...
 20-381 1.56e-28

Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. At least some members are localized in endoplasmic reticulum and involved in GPI anchor biosynthesis.


Pssm-ID: 281842  Cd Length: 414  Bit Score: 117.08  E-value: 1.56e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002258149  20 LLLGSIAAFYAVMVPYTKVEESFNVQAMHDILYHNYHIEKYDHLEFPGVVPRSFIgalvvSVISSPAVFVMHLCHVPKVY 99
Cdd:pfam03901   4 LLLLALRLLLALLVQTSDPDEHFQSWEPLHYLIFGYGFLTWEWSPKYGIRSYLYP-----LLFALPYYLLARLFGDSKYL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002258149 100 GLLAVRIVLGSI-ILMTLRLLRVqfisdiqVKRKFGHHAEAFYLILTATQFHLLFYSTRPLPNVLALAFVNLTYYFW--- 175
Cdd:pfam03901  79 VFYAPRLLLGLFsALCDYYLYRA-------VCRKYGLEIARWALLLSLTSWGMFFASTRTLPNSFEMILTSIALYYLley 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002258149 176 -----FKGNHRRTLQALIVAAVIFRCDMILLLGTIGLALLLSRSISLLEAIKC-----CVSTAIICIGFTVLVDSILWRR 245
Cdd:pfam03901 152 gntsvSNYKYLKAVLLIAALAILGRPTSALLWLPLVLYLLLRLRGKRLKLFLFlaislGLLVALLVLGAVILIDSYFYGR 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002258149 246 ILWPEFEVLWFNSVLNRSSEWGTHSIHWYFTSALPRSMLVAYPLCMVGALLDR-----RIVPYILPVFSFVVLYSKLPHK 320
Cdd:pfam03901 232 FVFTPLNFLKYNVLSNGSSFYGTHPWYFYFSNGLPNILGPFLLAFILGPLVLLlrkvsRLSQLLAPILIWLFIYSLQPHK 311

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002258149 321 ELRFIMASIPMLNVSASLAASRIYNNRkktgWKLLYVLMIGGFLSSLGYSGVTFMASYNNY 381
Cdd:pfam03901 312 EERFLYPVYPLILLSAAIALTRLSRRS----WKVRKKLSLLFLLLFFNVSLARLFGLVHQY 368
PLN02816 PLN02816
mannosyltransferase
 230-331 7.59e-06

mannosyltransferase


Pssm-ID: 215437  Cd Length: 546  Bit Score: 48.49  E-value: 7.59e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002258149 230 ICIGFTVLVDSILWRRILWPEFEVLWFNSVLNRSSEWGTHSIHWYFTSALPRSMLVAYPLCMVGAL--LDRRIVPYILPV 307
Cdd:PLN02816  249 LVLGFTCLLDRLMYGSWVIVPLNFLKFNFLSSGGDYYGTHPWHWYFTQGFLVMLFTFTPFSIAGIIksKNQKLSALILWV 328

                          90       100
                  ....*....|....*....|....
gi 1002258149 308 FSfvvLYSKLPHKELRFIMASIPM 331
Cdd:PLN02816  329 LA---IYSILGHKEFRFVLPVLPI 349
PMT_2 pfam13231
Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are ...
 97-194 1.35e-03

Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are not captured by pfam02366.


Pssm-ID: 433048 [Multi-domain]  Cd Length: 160  Bit Score: 39.55  E-value: 1.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002258149  97 KVYGLLAVRIVLGSIILMTLRLLRVQFIsdiqVKRKFGHHAEAFYLILTATQFHLLFYSTRPLPNVLALAFVNLTYYFWF 176
Cdd:pfam13231  15 ALFGDSEWAVRLPSALAGVLTILLLYLL----ARRLFGKRAALLAALLLAVVPLFVALSRLFTPDAPLLLFWALALYFLL 90

                          90
                  ....*....|....*...
gi 1002258149 177 KGNHRRTLQALIVAAVIF 194
Cdd:pfam13231  91 RALEKGRLKWWLLAGAAA 108
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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