Agenet domain; This domain is related to the TUDOR domain pfam00567. The function of the agenet domain is unknown. This family now matches both the two Agenet domains in the FMR proteins.

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002266369 306 GSKVEVTSNDDGFHGAWFQGTALKYVN-NKILVEYDALKADDEITPLTEAIEVQHVRPCPP 365
Cdd:pfam05641   1 GDKVEVLSDEEGFRGAWFRAKVIKVLKgDKYLVEYDDLLDEDGGGPLEEWVPASDIRPCPP 61

Agenet domain; This domain is related to the TUDOR domain pfam00567. The function of the agenet domain is unknown. This family now matches both the two Agenet domains in the FMR proteins.

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1002266369  28 GDLVEVLPDEPGYRGAHFPASVTASHANPRgYTVAYDG-----SGCPLGEVVAASQLRPRPP 84
Cdd:pfam05641   1 GDKVEVLSDEEGFRGAWFRAKVIKVLKGDK-YLVEYDDlldedGGGPLEEWVPASDIRPCPP 61

Tudor domain superfamily; The Tudor domain is a conserved structural domain, originally identified in the Tudor protein of Drosophila, that adopts a beta-barrel-like core structure containing four short beta-strands followed by an alpha-helical region. It binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions. Tudor domain-containing proteins may mediate protein-protein interactions required for various DNA-templated biological processes, such as RNA metabolism, as well as histone modification and the DNA damage response. Members of this superfamily contain one or more copies of the Tudor domain.

                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1002266369 237 INDEVEGFQGNGWWLGVITDVHPEFRYTFKAAHSGKEIQLDQKALRL 283
Cdd:cd20406     1 LGDKVDAFYNGGWWPGVVTKVLEDNRYLVYLDATKEELEFEHSDLRP 47

Agenet domain; This domain is related to the TUDOR domain pfam00567. The function of the agenet domain is unknown. This family now matches both the two Agenet domains in the FMR proteins.

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002266369 306 GSKVEVTSNDDGFHGAWFQGTALKYVN-NKILVEYDALKADDEITPLTEAIEVQHVRPCPP 365
Cdd:pfam05641   1 GDKVEVLSDEEGFRGAWFRAKVIKVLKgDKYLVEYDDLLDEDGGGPLEEWVPASDIRPCPP 61

second and fourth Tudor-like Agenet domains found in the family of Arabidopsis thaliana DUF724 domain-containing proteins (AtDUFs); The family includes a group of AtDUFs (AtDUF1-3 and AtDUF6-8) that may be involved in the polar growth of plant cells via transportation of RNAs. Members of this family have four Tudor-like Agenet domains, except for AtDUF8, which contains only two copies of the Tudor-like Agenet domain. AtDUF4 and AtDUF5 are not included here due to the lack of a Tudor-like Agenet domain. The model corresponds to the second and fourth Tudor-like Agenet domains in AtDUF1-3 and AtDUF6-7, as well as the first Tudor-like Agenet domain in AtDUF8. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1002266369 375 LLDEVDACWNDGWWVGVISKVNSGDRYMVYFRSSTEETEFGHEQLRL 421
Cdd:cd20406     1 LGDKVDAFYNGGWWPGVVTKVLEDNRYLVYLDATKEELEFEHSDLRP 47

Agenet domain; This domain is related to the TUDOR domain pfam00567. The function of the agenet domain is unknown. This family now matches both the two Agenet domains in the FMR proteins.

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002266369 169 GTQVEVAKLEGNSVVAWFSAAVEKAIWKNSLLVDYNCSKNDGSVLP-KEIVDLKHIRPHPQ 228
Cdd:pfam05641   1 GDKVEVLSDEEGFRGAWFRAKVIKVLKGDKYLVEYDDLLDEDGGGPlEEWVPASDIRPCPP 61

first and third Tudor-like Agenet domains found in a family of Arabidopsis thaliana DUF724 domain-containing proteins (AtDUFs); The family includes a group of AtDUFs (AtDUF1-3 and AtDUF6-8) that may be involved in the polar growth of plant cells via transportation of RNAs. Members of this family have four Tudor-like Agenet domains, except for AtDUF8, which contains only two copies of the Tudor-like Agenet domain. AtDUF4 and AtDUF5 are not included here due to the lack of a Tudor-like Agenet domain. The model corresponds to the first and third Tudor-like Agenet domains in AtDUF1-3 and AtDUF6-7, as well as the first Tudor-like Agenet domain in AtDUF8. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1002266369  25 FRPGDLVEVLPDEPGYRGAHFPASVTASHANPRGYTVAY-----DGSGCPLGEVVAASQLRPRPP 84
Cdd:cd20405     1 FSKGTEVEVSSEEEGFRGSWYRAIVVKEPEGEKKFLVKYdelllDDGSEPLEETVDLRRVRPVPP 65

first and third Tudor-like Agenet domains found in a family of Arabidopsis thaliana DUF724 domain-containing proteins (AtDUFs); The family includes a group of AtDUFs (AtDUF1-3 and AtDUF6-8) that may be involved in the polar growth of plant cells via transportation of RNAs. Members of this family have four Tudor-like Agenet domains, except for AtDUF8, which contains only two copies of the Tudor-like Agenet domain. AtDUF4 and AtDUF5 are not included here due to the lack of a Tudor-like Agenet domain. The model corresponds to the first and third Tudor-like Agenet domains in AtDUF1-3 and AtDUF6-7, as well as the first Tudor-like Agenet domain in AtDUF8. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1002266369 166 YKKGTQVEVAKLEGNSVVAWFSAAVEKAI-WKNSLLVDY-NCSKNDGSVLPKEIVDLKHIRPHP 227
Cdd:cd20405     1 FSKGTEVEVSSEEEGFRGSWYRAIVVKEPeGEKKFLVKYdELLLDDGSEPLEETVDLRRVRPVP 64

Tudor-like domain present in plant sequences; Domain in plant sequences with possible chromatin-associated functions.

                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1002266369  235 FCINDEVEGFQGNGWWLGVITDVHPEFRYT--FKAAHSGKEIQLDQKALRLRYDW 287
Cdd:smart00743   3 FKEGDRVEVFSEDSWWEAVVTKVLGDGKYLveYKGESEPLELTVDWSDLRPHPPW 57

Agenet domain; This domain is related to the TUDOR domain pfam00567. The function of the agenet domain is unknown. This family now matches both the two Agenet domains in the FMR proteins.

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002266369 306 GSKVEVTSNDDGFHGAWFQGTALKYVN-NKILVEYDALKADDEITPLTEAIEVQHVRPCPP 365
Cdd:pfam05641   1 GDKVEVLSDEEGFRGAWFRAKVIKVLKgDKYLVEYDDLLDEDGGGPLEEWVPASDIRPCPP 61

second and fourth Tudor-like Agenet domains found in the family of Arabidopsis thaliana DUF724 domain-containing proteins (AtDUFs); The family includes a group of AtDUFs (AtDUF1-3 and AtDUF6-8) that may be involved in the polar growth of plant cells via transportation of RNAs. Members of this family have four Tudor-like Agenet domains, except for AtDUF8, which contains only two copies of the Tudor-like Agenet domain. AtDUF4 and AtDUF5 are not included here due to the lack of a Tudor-like Agenet domain. The model corresponds to the second and fourth Tudor-like Agenet domains in AtDUF1-3 and AtDUF6-7, as well as the first Tudor-like Agenet domain in AtDUF8. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1002266369 375 LLDEVDACWNDGWWVGVISKVNSGDRYMVYFRSSTEETEFGHEQLRL 421
Cdd:cd20406     1 LGDKVDAFYNGGWWPGVVTKVLEDNRYLVYLDATKEELEFEHSDLRP 47

Agenet domain; This domain is related to the TUDOR domain pfam00567. The function of the agenet domain is unknown. This family now matches both the two Agenet domains in the FMR proteins.

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002266369 169 GTQVEVAKLEGNSVVAWFSAAVEKAIWKNSLLVDYNCSKNDGSVLP-KEIVDLKHIRPHPQ 228
Cdd:pfam05641   1 GDKVEVLSDEEGFRGAWFRAKVIKVLKGDKYLVEYDDLLDEDGGGPlEEWVPASDIRPCPP 61

first and third Tudor-like Agenet domains found in a family of Arabidopsis thaliana DUF724 domain-containing proteins (AtDUFs); The family includes a group of AtDUFs (AtDUF1-3 and AtDUF6-8) that may be involved in the polar growth of plant cells via transportation of RNAs. Members of this family have four Tudor-like Agenet domains, except for AtDUF8, which contains only two copies of the Tudor-like Agenet domain. AtDUF4 and AtDUF5 are not included here due to the lack of a Tudor-like Agenet domain. The model corresponds to the first and third Tudor-like Agenet domains in AtDUF1-3 and AtDUF6-7, as well as the first Tudor-like Agenet domain in AtDUF8. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1002266369  25 FRPGDLVEVLPDEPGYRGAHFPASVTASHANPRGYTVAY-----DGSGCPLGEVVAASQLRPRPP 84
Cdd:cd20405     1 FSKGTEVEVSSEEEGFRGSWYRAIVVKEPEGEKKFLVKYdelllDDGSEPLEETVDLRRVRPVPP 65

first and third Tudor-like Agenet domains found in a family of Arabidopsis thaliana DUF724 domain-containing proteins (AtDUFs); The family includes a group of AtDUFs (AtDUF1-3 and AtDUF6-8) that may be involved in the polar growth of plant cells via transportation of RNAs. Members of this family have four Tudor-like Agenet domains, except for AtDUF8, which contains only two copies of the Tudor-like Agenet domain. AtDUF4 and AtDUF5 are not included here due to the lack of a Tudor-like Agenet domain. The model corresponds to the first and third Tudor-like Agenet domains in AtDUF1-3 and AtDUF6-7, as well as the first Tudor-like Agenet domain in AtDUF8. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1002266369 166 YKKGTQVEVAKLEGNSVVAWFSAAVEKAI-WKNSLLVDY-NCSKNDGSVLPKEIVDLKHIRPHP 227
Cdd:cd20405     1 FSKGTEVEVSSEEEGFRGSWYRAIVVKEPeGEKKFLVKYdELLLDDGSEPLEETVDLRRVRPVP 64

Tudor-like domain present in plant sequences; Domain in plant sequences with possible chromatin-associated functions.

                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1002266369  235 FCINDEVEGFQGNGWWLGVITDVHPEFRYT--FKAAHSGKEIQLDQKALRLRYDW 287
Cdd:smart00743   3 FKEGDRVEVFSEDSWWEAVVTKVLGDGKYLveYKGESEPLELTVDWSDLRPHPPW 57