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Conserved domains on  [gi|1002272647|ref|XP_015640627|]
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chaperone protein dnaJ 49 [Oryza sativa Japonica Group]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 106-167 1.70e-26

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


:

Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 100.24  E-value: 1.70e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002272647 106 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN-KAPGAEDAFKLVSKAFKCLSNDQSRRTYD 167
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNpGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK10266 super family cl32492
curved DNA-binding protein;
105-235 3.11e-19

curved DNA-binding protein;


The actual alignment was detected with superfamily member PRK10266:

Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 86.80  E-value: 3.11e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTGA-IEDHEFNYQYsn 183
Cdd:PRK10266    4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQhRNDPQFNRQF-- 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1002272647 184 vmrqrttrrqRQARSSFYGYEedlDPDEIFRSFFyGTHDNmfQSHNAYRARG 235
Cdd:PRK10266   82 ----------QHGDGQSFNAE---DFDDIFSSIF-GQHAR--QSRQRPAARG 117
DUF1977 pfam09320
Domain of unknown function (DUF1977); Members of this family of functionally uncharacterized ...
 280-361 1.03e-10

Domain of unknown function (DUF1977); Members of this family of functionally uncharacterized domains are predominantly found in dnaj-like proteins.


:

Pssm-ID: 462754  Cd Length: 108  Bit Score: 58.02  E-value: 1.03e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 280 PEYSL--KRTSYFSISKVTEKHGVEYFVSKQEFDQQFPRgssSRDNLEQYVFKDYKSMLGRFCHVELQRRQ--------W 349
Cdd:pfam09320  10 PSYSFdpPPSPKYTVQRTTPNLKVPYYVNPNFVQKYSGR---KLRRLEKEVEEDYVQNLRNECERERQQKErlieraqgW 86

                          90       100
                  ....*....|....*....|..
gi 1002272647 350 ----------AKDYPTPHCDKL 361
Cdd:pfam09320  87 ffgdeeklekARAMPMPSCERL 108
 
Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 106-167 1.70e-26

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 100.24  E-value: 1.70e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002272647 106 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN-KAPGAEDAFKLVSKAFKCLSNDQSRRTYD 167
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNpGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 106-170 8.43e-25

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 103.45  E-value: 8.43e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1002272647 106 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFG 65
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 104-171 2.37e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 99.78  E-value: 2.37e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1002272647 104 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTGA 171
Cdd:PRK14276    3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGA 70
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 106-217 2.43e-23

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 94.38  E-value: 2.43e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 106 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGAEDAFKLVSKAFKCLSNDQSRRTYDQTGAIEDHEFNYQYSNV 184
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGdPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATELAES 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1002272647 185 MRQRTTRRQRQARSSFYGYEEDLDPDEIFRSFF 217
Cdd:COG0484    81 AAAEAAAAEAKEEAAEAGASEYEAIAEEASQLR 113
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 106-159 6.51e-21

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 84.90  E-value: 6.51e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1002272647 106 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGAEDAFKLVSKAFKCLSN 159
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDdPEAEEKFKEINEAYEVLSD 55
DnaJ smart00271
DnaJ molecular chaperone homology domain;
105-162 1.49e-20

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 84.21  E-value: 1.49e-20
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647  105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK--APGAEDAFKLVSKAFKCLSNDQS 162
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPgdKEEAEEKFKEINEAYEVLSDPEK 60
PRK10266 PRK10266
curved DNA-binding protein;
105-235 3.11e-19

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 86.80  E-value: 3.11e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTGA-IEDHEFNYQYsn 183
Cdd:PRK10266    4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQhRNDPQFNRQF-- 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1002272647 184 vmrqrttrrqRQARSSFYGYEedlDPDEIFRSFFyGTHDNmfQSHNAYRARG 235
Cdd:PRK10266   82 ----------QHGDGQSFNAE---DFDDIFSSIF-GQHAR--QSRQRPAARG 117
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
103-217 7.29e-19

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 87.57  E-value: 7.29e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 103 KNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQtgaiedhefnyqys 182
Cdd:NF037946    3 EKRDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAEINEAYEVLSNPEKRANYDK-------------- 68

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1002272647 183 nvmrqrttrrqrqarssfYGYE-------EDLDPDEIFRSFF 217
Cdd:NF037946   69 ------------------YGHDgvdgeggFGFDAFDVFSSFF 92
DUF1977 pfam09320
Domain of unknown function (DUF1977); Members of this family of functionally uncharacterized ...
 280-361 1.03e-10

Domain of unknown function (DUF1977); Members of this family of functionally uncharacterized domains are predominantly found in dnaj-like proteins.


Pssm-ID: 462754  Cd Length: 108  Bit Score: 58.02  E-value: 1.03e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 280 PEYSL--KRTSYFSISKVTEKHGVEYFVSKQEFDQQFPRgssSRDNLEQYVFKDYKSMLGRFCHVELQRRQ--------W 349
Cdd:pfam09320  10 PSYSFdpPPSPKYTVQRTTPNLKVPYYVNPNFVQKYSGR---KLRRLEKEVEEDYVQNLRNECERERQQKErlieraqgW 86

                          90       100
                  ....*....|....*....|..
gi 1002272647 350 ----------AKDYPTPHCDKL 361
Cdd:pfam09320  87 ffgdeeklekARAMPMPSCERL 108
 
Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 106-167 1.70e-26

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 100.24  E-value: 1.70e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002272647 106 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN-KAPGAEDAFKLVSKAFKCLSNDQSRRTYD 167
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNpGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 106-170 8.43e-25

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 103.45  E-value: 8.43e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1002272647 106 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFG 65
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 104-171 2.37e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 99.78  E-value: 2.37e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1002272647 104 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTGA 171
Cdd:PRK14276    3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGA 70
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 106-217 2.43e-23

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 94.38  E-value: 2.43e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 106 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGAEDAFKLVSKAFKCLSNDQSRRTYDQTGAIEDHEFNYQYSNV 184
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGdPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATELAES 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1002272647 185 MRQRTTRRQRQARSSFYGYEEDLDPDEIFRSFF 217
Cdd:COG0484    81 AAAEAAAAEAKEEAAEAGASEYEAIAEEASQLR 113
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 105-170 4.28e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 99.06  E-value: 4.28e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNkaPG---AEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK10767    4 RDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRN--PGdkeAEEKFKEIKEAYEVLSDPQKRAAYDQYG 70
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 101-170 1.04e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 98.00  E-value: 1.04e-22
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 101 ITKNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14298    1 MATTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFG 70
PRK14280 PRK14280
molecular chaperone DnaJ;
105-170 2.01e-22

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 97.10  E-value: 2.01e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14280    4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFG 69
PRK14293 PRK14293
molecular chaperone DnaJ;
106-170 8.38e-22

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 95.44  E-value: 8.38e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1002272647 106 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14293    4 DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFG 68
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 105-170 4.26e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 93.72  E-value: 4.26e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNkaPG---AEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14281    3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKN--PDnkeAEEHFKEVNEAYEVLSNDDKRRRYDQFG 69
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 106-159 6.51e-21

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 84.90  E-value: 6.51e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1002272647 106 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGAEDAFKLVSKAFKCLSN 159
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDdPEAEEKFKEINEAYEVLSD 55
DnaJ smart00271
DnaJ molecular chaperone homology domain;
105-162 1.49e-20

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 84.21  E-value: 1.49e-20
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647  105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK--APGAEDAFKLVSKAFKCLSNDQS 162
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPgdKEEAEEKFKEINEAYEVLSDPEK 60
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 105-170 1.94e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 91.37  E-value: 1.94e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14291    3 KDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFG 68
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 105-171 2.11e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 90.00  E-value: 2.11e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTGA 171
Cdd:PRK14299    4 KDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGT 70
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 106-164 7.76e-20

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 81.97  E-value: 7.76e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 106 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGAEDAFKLVSKAFKCLSNDQSRR 164
Cdd:COG5407     1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGdPKAEERFKEINEAYELLSDAEKRA 60
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 105-170 2.43e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 88.34  E-value: 2.43e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14283    5 RDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFG 70
PRK10266 PRK10266
curved DNA-binding protein;
105-235 3.11e-19

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 86.80  E-value: 3.11e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTGA-IEDHEFNYQYsn 183
Cdd:PRK10266    4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQhRNDPQFNRQF-- 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1002272647 184 vmrqrttrrqRQARSSFYGYEedlDPDEIFRSFFyGTHDNmfQSHNAYRARG 235
Cdd:PRK10266   82 ----------QHGDGQSFNAE---DFDDIFSSIF-GQHAR--QSRQRPAARG 117
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 105-170 3.46e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 87.76  E-value: 3.46e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14287    4 RDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFG 69
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
103-217 7.29e-19

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 87.57  E-value: 7.29e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 103 KNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQtgaiedhefnyqys 182
Cdd:NF037946    3 EKRDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAEINEAYEVLSNPEKRANYDK-------------- 68

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1002272647 183 nvmrqrttrrqrqarssfYGYE-------EDLDPDEIFRSFF 217
Cdd:NF037946   69 ------------------YGHDgvdgeggFGFDAFDVFSSFF 92
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 105-170 9.53e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 86.36  E-value: 9.53e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNkaPG---AEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14294    4 RDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRN--PGdkeAEELFKEAAEAYEVLSDPKKRGIYDQYG 70
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 105-170 7.61e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 84.08  E-value: 7.61e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNkaPG---AEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14277    5 KDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLN--PGdkeAEQKFKEINEAYEILSDPQKRAQYDQFG 71
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 106-173 7.88e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 83.79  E-value: 7.88e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1002272647 106 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTGAIE 173
Cdd:PRK14292    3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAP 70
PRK14279 PRK14279
molecular chaperone DnaJ;
104-169 8.32e-18

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 84.01  E-value: 8.32e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1002272647 104 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGAEDAFKLVSKAFKCLSNDQSRRTYDQT 169
Cdd:PRK14279    8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGdPAAEERFKAVSEAHDVLSDPAKRKEYDET 74
PRK14295 PRK14295
molecular chaperone DnaJ;
104-172 8.83e-18

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 83.74  E-value: 8.83e-18
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 104 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGAEDAFKLVSKAFKCLSNDQSRRTYDQTGAI 172
Cdd:PRK14295    8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGdAKAEERFKEISEAYDVLSDEKKRKEYDEARSL 77
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 105-180 1.36e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 83.06  E-value: 1.36e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPD---KNKAPgAEDAFKLVSKAFKCLSNDQSRRTYDQTGAIE----DHEF 177
Cdd:PRK14290    3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDlhpGNKAE-AEEKFKEISEAYEVLSDPQKRRQYDQTGTVDfgagGSNF 81


                  ...
gi 1002272647 178 NYQ 180
Cdd:PRK14290   82 NWD 84
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 105-170 1.44e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 83.18  E-value: 1.44e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14278    3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGG 68
PRK14289 PRK14289
molecular chaperone DnaJ;
101-170 1.71e-17

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 82.96  E-value: 1.71e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002272647 101 ITKNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNkaPG---AEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14289    1 MAEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKN--PGdkeAEEKFKEAAEAYDVLSDPDKRSRYDQFG 71
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 106-170 3.16e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 82.20  E-value: 3.16e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1002272647 106 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNkaPG---AEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14284    2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKN--PGdaeAEKRFKEVSEAYEVLSDAQKRESYDRYG 67
PRK14297 PRK14297
molecular chaperone DnaJ;
104-170 3.43e-17

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 82.14  E-value: 3.43e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1002272647 104 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGAEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14297    3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGnKEAEEKFKEINEAYQVLSDPQKKAQYDQFG 70
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
105-171 6.22e-17

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 75.14  E-value: 6.22e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG--AEDAFKLVSKAFKCLSNDQSRRTYDQTGA 171
Cdd:COG2214     5 KDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKalAEELFQRLNEAYEVLSDPERRAEYDRELG 73
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 103-170 7.75e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 78.06  E-value: 7.75e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1002272647 103 KNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14296    2 KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFG 69
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 105-235 9.31e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 77.72  E-value: 9.31e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGAEDAFKLVSKAFKCLSNDQSRRTYDQTG--AIEDHEFNYQY 181
Cdd:PRK14285    3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGnKEAESIFKEATEAYEVLIDDNKRAQYDRFGhtAFEGGGGFEGF 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1002272647 182 SnvmrqrttrrqrqarSSFYGYEEDL-DPDEIFRSFFYGthdNMFQSHNAYRARG 235
Cdd:PRK14285   83 S---------------GGFSGFSDIFeDFGDIFDSFFTG---NRGQDKNRKHEKG 119
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 104-170 2.16e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 76.57  E-value: 2.16e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1002272647 104 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGAEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14286    3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGnKESEEKFKEATEAYEILRDPKKRQAYDQFG 70
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 105-182 3.79e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 75.98  E-value: 3.79e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNkaPG----AEDAFKLVSKAFKCLSNDQSRRTYDQTGAIEDHEFNYQ 180
Cdd:PRK14282    4 KDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRH--PEnrkeAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQE 81


                  ..
gi 1002272647 181 YS 182
Cdd:PRK14282   82 TE 83
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 105-171 4.25e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 75.55  E-value: 4.25e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGAEDAFKLVSKAFKCLSNDQSRRTYDQTGA 171
Cdd:PRK14301    4 RDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDnPEAEQKFKEAAEAYEVLRDAEKRARYDRFGH 71
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 105-170 8.28e-15

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 76.01  E-value: 8.28e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:TIGR03835   2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYG 67
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 104-170 1.11e-14

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 74.86  E-value: 1.11e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1002272647 104 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNkapGAEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PTZ00037   27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKG---GDPEKFKEISRAYEVLSDPEKRKIYDEYG 90
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 104-182 4.16e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 66.58  E-value: 4.16e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 104 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRRTYDQTGaiedHE-FNYQYS 182
Cdd:PRK14300    2 SQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFG----HDaFQNQQS 77
DUF1977 pfam09320
Domain of unknown function (DUF1977); Members of this family of functionally uncharacterized ...
 280-361 1.03e-10

Domain of unknown function (DUF1977); Members of this family of functionally uncharacterized domains are predominantly found in dnaj-like proteins.


Pssm-ID: 462754  Cd Length: 108  Bit Score: 58.02  E-value: 1.03e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647 280 PEYSL--KRTSYFSISKVTEKHGVEYFVSKQEFDQQFPRgssSRDNLEQYVFKDYKSMLGRFCHVELQRRQ--------W 349
Cdd:pfam09320  10 PSYSFdpPPSPKYTVQRTTPNLKVPYYVNPNFVQKYSGR---KLRRLEKEVEEDYVQNLRNECERERQQKErlieraqgW 86

                          90       100
                  ....*....|....*....|..
gi 1002272647 350 ----------AKDYPTPHCDKL 361
Cdd:pfam09320  87 ffgdeeklekARAMPMPSCERL 108
PRK14288 PRK14288
molecular chaperone DnaJ;
107-170 3.69e-10

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 60.86  E-value: 3.69e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1002272647 107 YYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG-AEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PRK14288    5 YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKeAEEKFKLINEAYGVLSDEKKRALYDRYG 69
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
106-153 2.91e-09

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 52.88  E-value: 2.91e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1002272647 106 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKnKAPGAEDAFKLVSKA 153
Cdd:COG1076     5 DAFELLGLPPDADDAELKRAYRKLQREHHPDR-LAAGLPEEEQRLALQ 51
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 70-174 9.13e-08

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 53.50  E-value: 9.13e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647  70 VGESQNLRKESVGPSNVDKGYTEENVRVvrniTKNKDYYAILGVER---SCSVEEIRKAYRKLSLKVHPDKNKAPGAED- 145
Cdd:COG5269    12 VGELARIHSEYFKGRNVLNLYTREDFKN----WKKVDLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTAAGGNKGc 87

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1002272647 146 --AFKLVSKAFKCLSNDQSRRTYDQTGAIED 174
Cdd:COG5269    88 deFFKLIQKAREVLGDRKLRLQYDSNDFDAD 118
djlA PRK09430
co-chaperone DjlA;
105-137 5.29e-05

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 44.42  E-value: 5.29e-05
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1002272647 105 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDK 137
Cdd:PRK09430  200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDK 232
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 74-170 5.35e-05

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 45.16  E-value: 5.35e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002272647   74 QNLRKESVGPSNVDKGYT--EENVR-VVRNITKNKD-----------YYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK 139
Cdd:PTZ00341   528 EHVEEPTIAEEHVEEEIStaEEHIEePASDVQQDSEaaptieipdtlFYDILGVGVNADMKEISERYFKLAENYYPPKRS 607

                           90       100       110
                   ....*....|....*....|....*....|.
gi 1002272647  140 APGAEDAFKLVSKAFKCLSNDQSRRTYDQTG 170
Cdd:PTZ00341   608 GNEGFHKFKKINEAYQILGDIDKKKMYNKFG 638
PHA03102 PHA03102
Small T antigen; Reviewed
 111-137 3.66e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 37.73  E-value: 3.66e-03
                          10        20
                  ....*....|....*....|....*....
gi 1002272647 111 LGVERSC--SVEEIRKAYRKLSLKVHPDK 137
Cdd:PHA03102   11 LGLPRSAwgNLPLMRKAYLRKCLEFHPDK 39
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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