|
Name |
Accession |
Description |
Interval |
E-value |
| NB-ARC super family |
cl26397 |
NB-ARC domain; |
163-406 |
1.05e-34 |
|
NB-ARC domain;
The actual alignment was detected with superfamily member pfam00931:
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 134.43 E-value: 1.05e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 163 EDTVGRIAEKgrimdlLLSDEEHSIIPIYGLGGLGKTTLAQMAFSDC-TTQIAFEMLAWVYVSEKFDLNAISLSIKQ--Q 239
Cdd:pfam00931 2 EDMVEKVIGK------LSEKDEPGIVGIHGMGGVGKTTLAAQIFNDFdEVEGHFDSVAWVVVSKTFTISTLQQTILQnlG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 240 CNSHTLQYGDSGIHNVAVESILTEKRCLIVLDDLWEENNfkLDELEAMLRLCKKGSKVIVTTRSKKVADRM-NKDLQIEL 318
Cdd:pfam00931 76 LSEDDWDNKEEGELARKIRRALLTKRFLLVLDDVWDEED--WDKIGIPLPDRENGCRVLLTTRSEEVAGRVgGPSDPHEV 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 319 GLLPNEDCWTLFRKKA-RVPTPVPPYVEAMRETIVEKCQGLPLAVKSLGYFLG-RMRPTEWEQNLHSNIWAEKDDRFPDN 396
Cdd:pfam00931 154 ELLEPDEAWELFENKVfPKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLScKKTVEEWKHVYDVLQSELKSNSYSLN 233
|
250
....*....|
gi 1002277744 397 GVIANLKLSY 406
Cdd:pfam00931 234 SVRSILQLSY 243
|
|
| PLN03210 super family |
cl33662 |
Resistant to P. syringae 6; Provisional |
163-827 |
1.56e-19 |
|
Resistant to P. syringae 6; Provisional
The actual alignment was detected with superfamily member PLN03210:
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 96.48 E-value: 1.56e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 163 EDTVGRIAEKGRIMDLL-LSDEEHSIIPIYGLGGLGKTTLAQMAFSDCTTQI--------AFEMLAW-VYVSEKFDLNAI 232
Cdd:PLN03210 184 EDFVGIEDHIAKMSSLLhLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFqssvfidrAFISKSMeIYSSANPDDYNM 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 233 SLSIKQQCNSHTLQYGDSGIHNV-AVESILTEKRCLIVLDDLweENNFKLDELEAMLRLCKKGSKVIVTTRSKKVAdRMN 311
Cdd:PLN03210 264 KLHLQRAFLSEILDKKDIKIYHLgAMEERLKHRKVLIFIDDL--DDQDVLDALAGQTQWFGSGSRIIVITKDKHFL-RAH 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 312 KDLQIELGLLPNED------CWTLFRKKArvptpvPP--YVEAMREtiVEKCQG-LPLAVKSLGYFLgRMRPTEWeqnlh 382
Cdd:PLN03210 341 GIDHIYEVCLPSNElalemfCRSAFKKNS------PPdgFMELASE--VALRAGnLPLGLNVLGSYL-RGRDKED----- 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 383 sniWAEKDDRFP---DNGVIANLKLSYYSMPCSL-RLCFAYLSVFPKGSHIQKSSLIQQWIALGFiqppeSIPTEQYAEY 458
Cdd:PLN03210 407 ---WMDMLPRLRnglDGKIEKTLRVSYDGLNNKKdKAIFRHIACLFNGEKVNDIKLLLANSDLDV-----NIGLKNLVDK 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 459 CL----QELIEM-SFLQNVNAATaMSARYTEPQ------NVLKMHDIVHD-------LASVIAADEVCIFHASDCSSSNT 520
Cdd:PLN03210 479 SLihvrEDIVEMhSLLQEMGKEI-VRAQSNEPGereflvDAKDICDVLEDntgtkkvLGITLDIDEIDELHIHENAFKGM 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 521 KNccrymyLLNLSEFSRDPI---------------LPNTARALHFKD--CRKSPKNYSETKFLRiLDFSACTINELPDSI 583
Cdd:PLN03210 558 RN------LLFLKFYTKKWDqkkevrwhlpegfdyLPPKLRLLRWDKypLRCMPSNFRPENLVK-LQMQGSKLEKLWDGV 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 584 SHLSLLKYLNVSGlSGTLPK--SLSKLHHLQALTLSTNIDLVELPSYICEFLKLQYLDLHGCSKLKKLPDGIHKhKELQH 661
Cdd:PLN03210 631 HSLTGLRNIDLRG-SKNLKEipDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINL-KSLYR 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 662 LNLSDCTSLESLPLFSSQsgglqkLSFLNVS-----------HCSQLVKLSFLEEKLEK-----QPDHYL-----PNMVH 720
Cdd:PLN03210 709 LNLSGCSRLKSFPDISTN------ISWLDLDetaieefpsnlRLENLDELILCEMKSEKlwervQPLTPLmtmlsPSLTR 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 721 LNMSFCPKLQELPTGlFKHMRKLLFLNFSGCTSLEDLPEFVEHDagcsMLEVLDLSGCAKLPALPESSTELRElrcLNLS 800
Cdd:PLN03210 783 LFLSDIPSLVELPSS-IQNLHKLEHLEIENCINLETLPTGINLE----SLESLDLSGCSRLRTFPDISTNISD---LNLS 854
|
730 740
....*....|....*....|....*....
gi 1002277744 801 GCSklqnfLKLIPRW--KFGTLEYLNISG 827
Cdd:PLN03210 855 RTG-----IEEVPWWieKFSNLSFLDMNG 878
|
|
| Rx_N |
pfam18052 |
Rx N-terminal domain; This entry represents the N-terminal domain found in many plant ... |
12-100 |
9.11e-14 |
|
Rx N-terminal domain; This entry represents the N-terminal domain found in many plant resistance proteins. This domain has been predicted to be a coiled-coil, however the structure shows that it adopts a four helical bundle fold.
:
Pssm-ID: 436239 Cd Length: 93 Bit Score: 68.84 E-value: 9.11e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 12 VIKELSGKLGSPIWNTIMSQVTFRDDLEAIKSMLSSLQAKLNDAERKSQTDGSVRDLLKKLKAVAYDIEDRL--AVYESS 89
Cdd:pfam18052 1 AVSSLLEKLGSLLAEEAKLLKGVKDDLEKLKDELESIQAFLEDAERKQITDEQVKLWLKQLRDVAYDAEDVLdeFLYEAL 80
|
90
....*....|.
gi 1002277744 90 SNDGHDGSLRH 100
Cdd:pfam18052 81 RRKSSPKKLKF 91
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1674-1766 |
4.26e-10 |
|
Leucine-rich repeat (LRR) protein [Transcription];
:
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 64.57 E-value: 4.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1674 SDIVKFLQGCVNLLYLTIDSCiDLITLPEPIKNCHCLRKLEITNCwNFSVLPEWLGELTFLQKLDIQASKLEYLPQSIQR 1753
Cdd:COG4886 149 TDLPEPLGNLTNLKSLDLSNN-QLTDLPEELGNLTNLKELDLSNN-QITDLPEPLGNLTNLEELDLSGNQLTDLPEPLAN 226
|
90
....*....|...
gi 1002277744 1754 LTALERLVLNKCN 1766
Cdd:COG4886 227 LTNLETLDLSNNQ 239
|
|
| LRR super family |
cl34836 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1805-2087 |
2.81e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
The actual alignment was detected with superfamily member COG4886:
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 61.87 E-value: 2.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1805 LLQQVTSSQFIDLHIGGLECMIGLREMENLELQTKKELSSLSLewsyayadssdkyasseRGMQNRAVFEKLQPHDSLEI 1884
Cdd:COG4886 78 SLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDL-----------------SGNQLTDLPEELANLTNLKE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1885 LCIKNYAGVDFPRWMSLLPNLVQLKIVGMQFEYL--HLDQFQNLKELFLSRVQFAHLH--LNGLQNLIELSLSGLKFGHL 1960
Cdd:COG4886 141 LDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDLpeELGNLTNLKELDLSNNQITDLPepLGNLTNLEELDLSGNQLTDL 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1961 --HIDQLQNLRELKVSGVEFQHL-HLERLQNITELKLSEERFERL-HIDQLQNLKELKFSSVEFGHLHLERLQSITKLEL 2036
Cdd:COG4886 221 pePLANLTNLETLDLSNNQLTDLpELGNLTNLEELDLSNNQLTDLpPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNS 300
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1002277744 2037 CKKQFEHLHLVQLENLRQLYLFTVKFECVVLHQLQNLEELHLSQIESQKSN 2087
Cdd:COG4886 301 LLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLT 351
|
|
| LRR super family |
cl34836 |
Leucine-rich repeat (LRR) protein [Transcription]; |
970-1106 |
1.62e-06 |
|
Leucine-rich repeat (LRR) protein [Transcription];
The actual alignment was detected with superfamily member COG4886:
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 53.01 E-value: 1.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 970 AVLGNLRphrNLQSLSIKGYICTEFPDWINKindtLPDLVKLVFSDiNGCNYIP--ISQLPNLKELEI--NNMPRLNKIY 1045
Cdd:COG4886 153 EPLGNLT---NLKSLDLSNNQLTDLPEELGN----LTNLKELDLSN-NQITDLPepLGNLTNLEELDLsgNQLTDLPEPL 224
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002277744 1046 GTLPNLVKLILSH--IErcdHIPVLGNLPNLQELEIYNMpQLHDarIGPCNKLRRLTLVGLPN 1106
Cdd:COG4886 225 ANLTNLETLDLSNnqLT---DLPELGNLTNLEELDLSNN-QLTD--LPPLANLTNLKTLDLSN 281
|
|
| PLN03210 super family |
cl33662 |
Resistant to P. syringae 6; Provisional |
1522-1792 |
1.11e-05 |
|
Resistant to P. syringae 6; Provisional
The actual alignment was detected with superfamily member PLN03210:
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 51.03 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1522 SLPNLVTVKLSNIANCQCLPPLGQLANLEVLHISDMPSVRKVDGHVygteKPFRKLRELELSTMKNLEewltttLLLTGH 1601
Cdd:PLN03210 632 SLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSI----QYLNKLEDLDMSRCENLE------ILPTGI 701
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1602 NDHQLSRseevfpnlqvLLIANCPRMRFVPGFPrSRECTLEKSYSILLSFEQFIGSSNLALIALKINDSGSSSDIVKFLQ 1681
Cdd:PLN03210 702 NLKSLYR----------LNLSGCSRLKSFPDIS-TNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLT 770
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1682 GCVNLL-----YLTIDSCIDLITLPEPIKNCHCLRKLEITNCWNFSVLP-----EWLGEL---------------TFLQK 1736
Cdd:PLN03210 771 PLMTMLspsltRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPtginlESLESLdlsgcsrlrtfpdisTNISD 850
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1002277744 1737 LDIQASKLEYLPQSIQRLTALERLVLNKCNYKLRerctSREDKEKIKHIKTIDMNE 1792
Cdd:PLN03210 851 LNLSRTGIEEVPWWIEKFSNLSFLDMNGCNNLQR----VSLNISKLKHLETVDFSD 902
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| NB-ARC |
pfam00931 |
NB-ARC domain; |
163-406 |
1.05e-34 |
|
NB-ARC domain;
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 134.43 E-value: 1.05e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 163 EDTVGRIAEKgrimdlLLSDEEHSIIPIYGLGGLGKTTLAQMAFSDC-TTQIAFEMLAWVYVSEKFDLNAISLSIKQ--Q 239
Cdd:pfam00931 2 EDMVEKVIGK------LSEKDEPGIVGIHGMGGVGKTTLAAQIFNDFdEVEGHFDSVAWVVVSKTFTISTLQQTILQnlG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 240 CNSHTLQYGDSGIHNVAVESILTEKRCLIVLDDLWEENNfkLDELEAMLRLCKKGSKVIVTTRSKKVADRM-NKDLQIEL 318
Cdd:pfam00931 76 LSEDDWDNKEEGELARKIRRALLTKRFLLVLDDVWDEED--WDKIGIPLPDRENGCRVLLTTRSEEVAGRVgGPSDPHEV 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 319 GLLPNEDCWTLFRKKA-RVPTPVPPYVEAMRETIVEKCQGLPLAVKSLGYFLG-RMRPTEWEQNLHSNIWAEKDDRFPDN 396
Cdd:pfam00931 154 ELLEPDEAWELFENKVfPKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLScKKTVEEWKHVYDVLQSELKSNSYSLN 233
|
250
....*....|
gi 1002277744 397 GVIANLKLSY 406
Cdd:pfam00931 234 SVRSILQLSY 243
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
163-827 |
1.56e-19 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 96.48 E-value: 1.56e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 163 EDTVGRIAEKGRIMDLL-LSDEEHSIIPIYGLGGLGKTTLAQMAFSDCTTQI--------AFEMLAW-VYVSEKFDLNAI 232
Cdd:PLN03210 184 EDFVGIEDHIAKMSSLLhLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFqssvfidrAFISKSMeIYSSANPDDYNM 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 233 SLSIKQQCNSHTLQYGDSGIHNV-AVESILTEKRCLIVLDDLweENNFKLDELEAMLRLCKKGSKVIVTTRSKKVAdRMN 311
Cdd:PLN03210 264 KLHLQRAFLSEILDKKDIKIYHLgAMEERLKHRKVLIFIDDL--DDQDVLDALAGQTQWFGSGSRIIVITKDKHFL-RAH 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 312 KDLQIELGLLPNED------CWTLFRKKArvptpvPP--YVEAMREtiVEKCQG-LPLAVKSLGYFLgRMRPTEWeqnlh 382
Cdd:PLN03210 341 GIDHIYEVCLPSNElalemfCRSAFKKNS------PPdgFMELASE--VALRAGnLPLGLNVLGSYL-RGRDKED----- 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 383 sniWAEKDDRFP---DNGVIANLKLSYYSMPCSL-RLCFAYLSVFPKGSHIQKSSLIQQWIALGFiqppeSIPTEQYAEY 458
Cdd:PLN03210 407 ---WMDMLPRLRnglDGKIEKTLRVSYDGLNNKKdKAIFRHIACLFNGEKVNDIKLLLANSDLDV-----NIGLKNLVDK 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 459 CL----QELIEM-SFLQNVNAATaMSARYTEPQ------NVLKMHDIVHD-------LASVIAADEVCIFHASDCSSSNT 520
Cdd:PLN03210 479 SLihvrEDIVEMhSLLQEMGKEI-VRAQSNEPGereflvDAKDICDVLEDntgtkkvLGITLDIDEIDELHIHENAFKGM 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 521 KNccrymyLLNLSEFSRDPI---------------LPNTARALHFKD--CRKSPKNYSETKFLRiLDFSACTINELPDSI 583
Cdd:PLN03210 558 RN------LLFLKFYTKKWDqkkevrwhlpegfdyLPPKLRLLRWDKypLRCMPSNFRPENLVK-LQMQGSKLEKLWDGV 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 584 SHLSLLKYLNVSGlSGTLPK--SLSKLHHLQALTLSTNIDLVELPSYICEFLKLQYLDLHGCSKLKKLPDGIHKhKELQH 661
Cdd:PLN03210 631 HSLTGLRNIDLRG-SKNLKEipDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINL-KSLYR 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 662 LNLSDCTSLESLPLFSSQsgglqkLSFLNVS-----------HCSQLVKLSFLEEKLEK-----QPDHYL-----PNMVH 720
Cdd:PLN03210 709 LNLSGCSRLKSFPDISTN------ISWLDLDetaieefpsnlRLENLDELILCEMKSEKlwervQPLTPLmtmlsPSLTR 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 721 LNMSFCPKLQELPTGlFKHMRKLLFLNFSGCTSLEDLPEFVEHDagcsMLEVLDLSGCAKLPALPESSTELRElrcLNLS 800
Cdd:PLN03210 783 LFLSDIPSLVELPSS-IQNLHKLEHLEIENCINLETLPTGINLE----SLESLDLSGCSRLRTFPDISTNISD---LNLS 854
|
730 740
....*....|....*....|....*....
gi 1002277744 801 GCSklqnfLKLIPRW--KFGTLEYLNISG 827
Cdd:PLN03210 855 RTG-----IEEVPWWieKFSNLSFLDMNG 878
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
557-765 |
3.19e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 83.44 E-value: 3.19e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 557 PKNYSETKFLRILDFSACTINELPDSISHLSLLKYLNVSG--LSgTLPKSLSKLHHLQALTLSTNiDLVELPSYICEFLK 634
Cdd:COG4886 129 PEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNnqLT-DLPEELGNLTNLKELDLSNN-QITDLPEPLGNLTN 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 635 LQYLDLHGCsKLKKLPDGIHKHKELQHLNLSDcTSLESLPLFssqsGGLQKLSFLNVSHCsQLVKLSFLEEklekqpdhy 714
Cdd:COG4886 207 LEELDLSGN-QLTDLPEPLANLTNLETLDLSN-NQLTDLPEL----GNLTNLEELDLSNN-QLTDLPPLAN--------- 270
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1002277744 715 LPNMVHLNMSFCP----KLQELPTGLFKHMRKLLFLNFSGCTSLEDLPEFVEHDA 765
Cdd:COG4886 271 LTNLKTLDLSNNQltdlKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLL 325
|
|
| Rx_N |
pfam18052 |
Rx N-terminal domain; This entry represents the N-terminal domain found in many plant ... |
12-100 |
9.11e-14 |
|
Rx N-terminal domain; This entry represents the N-terminal domain found in many plant resistance proteins. This domain has been predicted to be a coiled-coil, however the structure shows that it adopts a four helical bundle fold.
Pssm-ID: 436239 Cd Length: 93 Bit Score: 68.84 E-value: 9.11e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 12 VIKELSGKLGSPIWNTIMSQVTFRDDLEAIKSMLSSLQAKLNDAERKSQTDGSVRDLLKKLKAVAYDIEDRL--AVYESS 89
Cdd:pfam18052 1 AVSSLLEKLGSLLAEEAKLLKGVKDDLEKLKDELESIQAFLEDAERKQITDEQVKLWLKQLRDVAYDAEDVLdeFLYEAL 80
|
90
....*....|.
gi 1002277744 90 SNDGHDGSLRH 100
Cdd:pfam18052 81 RRKSSPKKLKF 91
|
|
| RX-CC_like |
cd14798 |
Coiled-coil domain of the potato virux X resistance protein and similar proteins; The potato ... |
35-131 |
1.41e-12 |
|
Coiled-coil domain of the potato virux X resistance protein and similar proteins; The potato virus X resistance protein (RX) confers resistance against potato virus X. It is a member of a family of resistance proteins with a domain architecture that includes an N-terminal coiled-coil domain (modeled here), a nucleotide-binding domain, and leucine-rich repeats (CC-NB-LRR). These intracellular resistance proteins recognize pathogen effector proteins and will subsequently trigger a response that may be as severe as localized cell death. The N-terminal coiled-coil domain of RX has been shown to interact with RanGAP2, which is a necessary co-factor in the resistance response.
Pssm-ID: 271353 [Multi-domain] Cd Length: 124 Bit Score: 66.49 E-value: 1.41e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 35 RDDLEAIKSMLSSLQAKLNDAERKSQTDGSVRDLLKKLKAVAYDIEDRL--AVYESSSNDGHDGSLRHEWsSFPEKLKSR 112
Cdd:cd14798 27 KEEIESLKDELESMQAFLKDADAKQDEDEELKDWVKQVRDVAYDAEDIIdsFLLKLVPDKRRGGFLKRLF-SLLKELKEL 105
|
90
....*....|....*....
gi 1002277744 113 YNLPREMKKMRRRLEGIKK 131
Cdd:cd14798 106 HQVAKEIQSIKSRIKDISS 124
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1674-1766 |
4.26e-10 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 64.57 E-value: 4.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1674 SDIVKFLQGCVNLLYLTIDSCiDLITLPEPIKNCHCLRKLEITNCwNFSVLPEWLGELTFLQKLDIQASKLEYLPQSIQR 1753
Cdd:COG4886 149 TDLPEPLGNLTNLKSLDLSNN-QLTDLPEELGNLTNLKELDLSNN-QITDLPEPLGNLTNLEELDLSGNQLTDLPEPLAN 226
|
90
....*....|...
gi 1002277744 1754 LTALERLVLNKCN 1766
Cdd:COG4886 227 LTNLETLDLSNNQ 239
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1805-2087 |
2.81e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 61.87 E-value: 2.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1805 LLQQVTSSQFIDLHIGGLECMIGLREMENLELQTKKELSSLSLewsyayadssdkyasseRGMQNRAVFEKLQPHDSLEI 1884
Cdd:COG4886 78 SLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDL-----------------SGNQLTDLPEELANLTNLKE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1885 LCIKNYAGVDFPRWMSLLPNLVQLKIVGMQFEYL--HLDQFQNLKELFLSRVQFAHLH--LNGLQNLIELSLSGLKFGHL 1960
Cdd:COG4886 141 LDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDLpeELGNLTNLKELDLSNNQITDLPepLGNLTNLEELDLSGNQLTDL 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1961 --HIDQLQNLRELKVSGVEFQHL-HLERLQNITELKLSEERFERL-HIDQLQNLKELKFSSVEFGHLHLERLQSITKLEL 2036
Cdd:COG4886 221 pePLANLTNLETLDLSNNQLTDLpELGNLTNLEELDLSNNQLTDLpPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNS 300
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1002277744 2037 CKKQFEHLHLVQLENLRQLYLFTVKFECVVLHQLQNLEELHLSQIESQKSN 2087
Cdd:COG4886 301 LLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLT 351
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
970-1106 |
1.62e-06 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 53.01 E-value: 1.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 970 AVLGNLRphrNLQSLSIKGYICTEFPDWINKindtLPDLVKLVFSDiNGCNYIP--ISQLPNLKELEI--NNMPRLNKIY 1045
Cdd:COG4886 153 EPLGNLT---NLKSLDLSNNQLTDLPEELGN----LTNLKELDLSN-NQITDLPepLGNLTNLEELDLsgNQLTDLPEPL 224
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002277744 1046 GTLPNLVKLILSH--IErcdHIPVLGNLPNLQELEIYNMpQLHDarIGPCNKLRRLTLVGLPN 1106
Cdd:COG4886 225 ANLTNLETLDLSNnqLT---DLPELGNLTNLEELDLSNN-QLTD--LPPLANLTNLKTLDLSN 281
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
1522-1792 |
1.11e-05 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 51.03 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1522 SLPNLVTVKLSNIANCQCLPPLGQLANLEVLHISDMPSVRKVDGHVygteKPFRKLRELELSTMKNLEewltttLLLTGH 1601
Cdd:PLN03210 632 SLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSI----QYLNKLEDLDMSRCENLE------ILPTGI 701
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1602 NDHQLSRseevfpnlqvLLIANCPRMRFVPGFPrSRECTLEKSYSILLSFEQFIGSSNLALIALKINDSGSSSDIVKFLQ 1681
Cdd:PLN03210 702 NLKSLYR----------LNLSGCSRLKSFPDIS-TNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLT 770
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1682 GCVNLL-----YLTIDSCIDLITLPEPIKNCHCLRKLEITNCWNFSVLP-----EWLGEL---------------TFLQK 1736
Cdd:PLN03210 771 PLMTMLspsltRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPtginlESLESLdlsgcsrlrtfpdisTNISD 850
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1002277744 1737 LDIQASKLEYLPQSIQRLTALERLVLNKCNYKLRerctSREDKEKIKHIKTIDMNE 1792
Cdd:PLN03210 851 LNLSRTGIEEVPWWIEKFSNLSFLDMNGCNNLQR----VSLNISKLKHLETVDFSD 902
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
1986-2093 |
2.74e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 41.70 E-value: 2.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1986 LQNITELKLSEERFERLH-IDQLQNLKELkfssvefgHLHLERLQSITKLELCKkQFEHLHL-----------VQLENLR 2053
Cdd:cd21340 1 LKRITHLYLNDKNITKIDnLSLCKNLKVL--------YLYDNKITKIENLEFLT-NLTHLYLqnnqiekienlENLVNLK 71
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1002277744 2054 QLYLFTVKFECVV-LHQLQNLEELHlsqIESQKSNKPVCIE 2093
Cdd:cd21340 72 KLYLGGNRISVVEgLENLTNLEELH---IENQRLPPGEKLT 109
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| NB-ARC |
pfam00931 |
NB-ARC domain; |
163-406 |
1.05e-34 |
|
NB-ARC domain;
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 134.43 E-value: 1.05e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 163 EDTVGRIAEKgrimdlLLSDEEHSIIPIYGLGGLGKTTLAQMAFSDC-TTQIAFEMLAWVYVSEKFDLNAISLSIKQ--Q 239
Cdd:pfam00931 2 EDMVEKVIGK------LSEKDEPGIVGIHGMGGVGKTTLAAQIFNDFdEVEGHFDSVAWVVVSKTFTISTLQQTILQnlG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 240 CNSHTLQYGDSGIHNVAVESILTEKRCLIVLDDLWEENNfkLDELEAMLRLCKKGSKVIVTTRSKKVADRM-NKDLQIEL 318
Cdd:pfam00931 76 LSEDDWDNKEEGELARKIRRALLTKRFLLVLDDVWDEED--WDKIGIPLPDRENGCRVLLTTRSEEVAGRVgGPSDPHEV 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 319 GLLPNEDCWTLFRKKA-RVPTPVPPYVEAMRETIVEKCQGLPLAVKSLGYFLG-RMRPTEWEQNLHSNIWAEKDDRFPDN 396
Cdd:pfam00931 154 ELLEPDEAWELFENKVfPKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLScKKTVEEWKHVYDVLQSELKSNSYSLN 233
|
250
....*....|
gi 1002277744 397 GVIANLKLSY 406
Cdd:pfam00931 234 SVRSILQLSY 243
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
163-827 |
1.56e-19 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 96.48 E-value: 1.56e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 163 EDTVGRIAEKGRIMDLL-LSDEEHSIIPIYGLGGLGKTTLAQMAFSDCTTQI--------AFEMLAW-VYVSEKFDLNAI 232
Cdd:PLN03210 184 EDFVGIEDHIAKMSSLLhLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFqssvfidrAFISKSMeIYSSANPDDYNM 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 233 SLSIKQQCNSHTLQYGDSGIHNV-AVESILTEKRCLIVLDDLweENNFKLDELEAMLRLCKKGSKVIVTTRSKKVAdRMN 311
Cdd:PLN03210 264 KLHLQRAFLSEILDKKDIKIYHLgAMEERLKHRKVLIFIDDL--DDQDVLDALAGQTQWFGSGSRIIVITKDKHFL-RAH 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 312 KDLQIELGLLPNED------CWTLFRKKArvptpvPP--YVEAMREtiVEKCQG-LPLAVKSLGYFLgRMRPTEWeqnlh 382
Cdd:PLN03210 341 GIDHIYEVCLPSNElalemfCRSAFKKNS------PPdgFMELASE--VALRAGnLPLGLNVLGSYL-RGRDKED----- 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 383 sniWAEKDDRFP---DNGVIANLKLSYYSMPCSL-RLCFAYLSVFPKGSHIQKSSLIQQWIALGFiqppeSIPTEQYAEY 458
Cdd:PLN03210 407 ---WMDMLPRLRnglDGKIEKTLRVSYDGLNNKKdKAIFRHIACLFNGEKVNDIKLLLANSDLDV-----NIGLKNLVDK 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 459 CL----QELIEM-SFLQNVNAATaMSARYTEPQ------NVLKMHDIVHD-------LASVIAADEVCIFHASDCSSSNT 520
Cdd:PLN03210 479 SLihvrEDIVEMhSLLQEMGKEI-VRAQSNEPGereflvDAKDICDVLEDntgtkkvLGITLDIDEIDELHIHENAFKGM 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 521 KNccrymyLLNLSEFSRDPI---------------LPNTARALHFKD--CRKSPKNYSETKFLRiLDFSACTINELPDSI 583
Cdd:PLN03210 558 RN------LLFLKFYTKKWDqkkevrwhlpegfdyLPPKLRLLRWDKypLRCMPSNFRPENLVK-LQMQGSKLEKLWDGV 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 584 SHLSLLKYLNVSGlSGTLPK--SLSKLHHLQALTLSTNIDLVELPSYICEFLKLQYLDLHGCSKLKKLPDGIHKhKELQH 661
Cdd:PLN03210 631 HSLTGLRNIDLRG-SKNLKEipDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINL-KSLYR 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 662 LNLSDCTSLESLPLFSSQsgglqkLSFLNVS-----------HCSQLVKLSFLEEKLEK-----QPDHYL-----PNMVH 720
Cdd:PLN03210 709 LNLSGCSRLKSFPDISTN------ISWLDLDetaieefpsnlRLENLDELILCEMKSEKlwervQPLTPLmtmlsPSLTR 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 721 LNMSFCPKLQELPTGlFKHMRKLLFLNFSGCTSLEDLPEFVEHDagcsMLEVLDLSGCAKLPALPESSTELRElrcLNLS 800
Cdd:PLN03210 783 LFLSDIPSLVELPSS-IQNLHKLEHLEIENCINLETLPTGINLE----SLESLDLSGCSRLRTFPDISTNISD---LNLS 854
|
730 740
....*....|....*....|....*....
gi 1002277744 801 GCSklqnfLKLIPRW--KFGTLEYLNISG 827
Cdd:PLN03210 855 RTG-----IEEVPWWieKFSNLSFLDMNG 878
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
557-765 |
3.19e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 83.44 E-value: 3.19e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 557 PKNYSETKFLRILDFSACTINELPDSISHLSLLKYLNVSG--LSgTLPKSLSKLHHLQALTLSTNiDLVELPSYICEFLK 634
Cdd:COG4886 129 PEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNnqLT-DLPEELGNLTNLKELDLSNN-QITDLPEPLGNLTN 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 635 LQYLDLHGCsKLKKLPDGIHKHKELQHLNLSDcTSLESLPLFssqsGGLQKLSFLNVSHCsQLVKLSFLEEklekqpdhy 714
Cdd:COG4886 207 LEELDLSGN-QLTDLPEPLANLTNLETLDLSN-NQLTDLPEL----GNLTNLEELDLSNN-QLTDLPPLAN--------- 270
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1002277744 715 LPNMVHLNMSFCP----KLQELPTGLFKHMRKLLFLNFSGCTSLEDLPEFVEHDA 765
Cdd:COG4886 271 LTNLKTLDLSNNQltdlKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLL 325
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
566-750 |
4.49e-15 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 79.98 E-value: 4.49e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 566 LRILDFSACTINELPDSISHLSLLKYLNVSG--LSgTLPKSLSKLHHLQALTLSTNiDLVELPSYICEFLKLQYLDLHGC 643
Cdd:COG4886 115 LESLDLSGNQLTDLPEELANLTNLKELDLSNnqLT-DLPEPLGNLTNLKSLDLSNN-QLTDLPEELGNLTNLKELDLSNN 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 644 sKLKKLPDGIHKHKELQHLNLSDCTsLESLPlfsSQSGGLQKLSFLNVSHCsQLVKLSFLEEklekqpdhyLPNMVHLNM 723
Cdd:COG4886 193 -QITDLPEPLGNLTNLEELDLSGNQ-LTDLP---EPLANLTNLETLDLSNN-QLTDLPELGN---------LTNLEELDL 257
|
170 180
....*....|....*....|....*..
gi 1002277744 724 SFCpKLQELPTGLfkHMRKLLFLNFSG 750
Cdd:COG4886 258 SNN-QLTDLPPLA--NLTNLKTLDLSN 281
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
575-980 |
8.86e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 76.13 E-value: 8.86e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 575 TINELPDSISHLSLLKYLNVSGLSGTLPKSLSKLHHLQALTLSTNIDLVELPsyiceflKLQYLDLHGCsKLKKLPDGIH 654
Cdd:COG4886 62 LSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLT-------NLESLDLSGN-QLTDLPEELA 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 655 KHKELQHLNLSDcTSLESLPlfsSQSGGLQKLSFLNVSHCsqlvKLSFLEEKLEKqpdhyLPNMVHLNMSFCpKLQELPT 734
Cdd:COG4886 134 NLTNLKELDLSN-NQLTDLP---EPLGNLTNLKSLDLSNN----QLTDLPEELGN-----LTNLKELDLSNN-QITDLPE 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 735 GLFKhMRKLLFLNFSGCTsLEDLPEFVehdAGCSMLEVLDLSGCaKLPALPESStELRELRCLNLSGcsklqNFLKLIP- 813
Cdd:COG4886 200 PLGN-LTNLEELDLSGNQ-LTDLPEPL---ANLTNLETLDLSNN-QLTDLPELG-NLTNLEELDLSN-----NQLTDLPp 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 814 RWKFGTLEYLNISGvgaksdseapgtsaedqssqDPIKELELGMLQEDIITQGLFRLKYLSIGGFTLYSEQGIARMVDLL 893
Cdd:COG4886 268 LANLTNLKTLDLSN--------------------NQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLL 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 894 TLPNFNVRLQDDGRCSNILILQQILDVTHRQLNIKCLENVVFSEEAKQLELDRMRQFHSLGFEWSLSGMVSSVKQRAVLG 973
Cdd:COG4886 328 LLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLAL 407
|
....*..
gi 1002277744 974 NLRPHRN 980
Cdd:COG4886 408 LDAVNTE 414
|
|
| Rx_N |
pfam18052 |
Rx N-terminal domain; This entry represents the N-terminal domain found in many plant ... |
12-100 |
9.11e-14 |
|
Rx N-terminal domain; This entry represents the N-terminal domain found in many plant resistance proteins. This domain has been predicted to be a coiled-coil, however the structure shows that it adopts a four helical bundle fold.
Pssm-ID: 436239 Cd Length: 93 Bit Score: 68.84 E-value: 9.11e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 12 VIKELSGKLGSPIWNTIMSQVTFRDDLEAIKSMLSSLQAKLNDAERKSQTDGSVRDLLKKLKAVAYDIEDRL--AVYESS 89
Cdd:pfam18052 1 AVSSLLEKLGSLLAEEAKLLKGVKDDLEKLKDELESIQAFLEDAERKQITDEQVKLWLKQLRDVAYDAEDVLdeFLYEAL 80
|
90
....*....|.
gi 1002277744 90 SNDGHDGSLRH 100
Cdd:pfam18052 81 RRKSSPKKLKF 91
|
|
| RX-CC_like |
cd14798 |
Coiled-coil domain of the potato virux X resistance protein and similar proteins; The potato ... |
35-131 |
1.41e-12 |
|
Coiled-coil domain of the potato virux X resistance protein and similar proteins; The potato virus X resistance protein (RX) confers resistance against potato virus X. It is a member of a family of resistance proteins with a domain architecture that includes an N-terminal coiled-coil domain (modeled here), a nucleotide-binding domain, and leucine-rich repeats (CC-NB-LRR). These intracellular resistance proteins recognize pathogen effector proteins and will subsequently trigger a response that may be as severe as localized cell death. The N-terminal coiled-coil domain of RX has been shown to interact with RanGAP2, which is a necessary co-factor in the resistance response.
Pssm-ID: 271353 [Multi-domain] Cd Length: 124 Bit Score: 66.49 E-value: 1.41e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 35 RDDLEAIKSMLSSLQAKLNDAERKSQTDGSVRDLLKKLKAVAYDIEDRL--AVYESSSNDGHDGSLRHEWsSFPEKLKSR 112
Cdd:cd14798 27 KEEIESLKDELESMQAFLKDADAKQDEDEELKDWVKQVRDVAYDAEDIIdsFLLKLVPDKRRGGFLKRLF-SLLKELKEL 105
|
90
....*....|....*....
gi 1002277744 113 YNLPREMKKMRRRLEGIKK 131
Cdd:cd14798 106 HQVAKEIQSIKSRIKDISS 124
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
527-821 |
2.17e-10 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 66.44 E-value: 2.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 527 MYLLNLSEFSRDPILPNTaralhfkdcrksPKNYSEtkflriLDFSACTINELPDSIsHLSLLKYLNVSGL-SGTLPKSL 605
Cdd:PLN03210 706 LYRLNLSGCSRLKSFPDI------------STNISW------LDLDETAIEEFPSNL-RLENLDELILCEMkSEKLWERV 766
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 606 SKL--------HHLQALTLSTNIDLVELPSYICEFLKLQYLDLHGCSKLKKLPDGIHKHkELQHLNLSDCTSLESLPLFS 677
Cdd:PLN03210 767 QPLtplmtmlsPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLE-SLESLDLSGCSRLRTFPDIS 845
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 678 SQsgglqkLSFLNVSHCSqlvklsfLEEK---LEKqpdhyLPNMVHLNMSFCPKLQELPTGLFKhMRKLLFLNFSGCTSL 754
Cdd:PLN03210 846 TN------ISDLNLSRTG-------IEEVpwwIEK-----FSNLSFLDMNGCNNLQRVSLNISK-LKHLETVDFSDCGAL 906
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1002277744 755 EDlpefVEHDAGCSMLEVLDLSGCAKLPALPesstelrelrCLNLSGCSKLQNFLKLIPRWKFGTLE 821
Cdd:PLN03210 907 TE----ASWNGSPSEVAMATDNIHSKLPSTV----------CINFINCFNLDQEALLQQQSIFKQLI 959
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1674-1766 |
4.26e-10 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 64.57 E-value: 4.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1674 SDIVKFLQGCVNLLYLTIDSCiDLITLPEPIKNCHCLRKLEITNCwNFSVLPEWLGELTFLQKLDIQASKLEYLPQSIQR 1753
Cdd:COG4886 149 TDLPEPLGNLTNLKSLDLSNN-QLTDLPEELGNLTNLKELDLSNN-QITDLPEPLGNLTNLEELDLSGNQLTDLPEPLAN 226
|
90
....*....|...
gi 1002277744 1754 LTALERLVLNKCN 1766
Cdd:COG4886 227 LTNLETLDLSNNQ 239
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1805-2087 |
2.81e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 61.87 E-value: 2.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1805 LLQQVTSSQFIDLHIGGLECMIGLREMENLELQTKKELSSLSLewsyayadssdkyasseRGMQNRAVFEKLQPHDSLEI 1884
Cdd:COG4886 78 SLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDL-----------------SGNQLTDLPEELANLTNLKE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1885 LCIKNYAGVDFPRWMSLLPNLVQLKIVGMQFEYL--HLDQFQNLKELFLSRVQFAHLH--LNGLQNLIELSLSGLKFGHL 1960
Cdd:COG4886 141 LDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDLpeELGNLTNLKELDLSNNQITDLPepLGNLTNLEELDLSGNQLTDL 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1961 --HIDQLQNLRELKVSGVEFQHL-HLERLQNITELKLSEERFERL-HIDQLQNLKELKFSSVEFGHLHLERLQSITKLEL 2036
Cdd:COG4886 221 pePLANLTNLETLDLSNNQLTDLpELGNLTNLEELDLSNNQLTDLpPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNS 300
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1002277744 2037 CKKQFEHLHLVQLENLRQLYLFTVKFECVVLHQLQNLEELHLSQIESQKSN 2087
Cdd:COG4886 301 LLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLT 351
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1680-1766 |
9.41e-08 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 56.87 E-value: 9.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1680 LQGCVNLLYLTIDSCiDLITLPEPIKNCHCLRKLEITNCwNFSVLPEWLGELTFLQKLDIQASKLEYLPQSIQRLTALER 1759
Cdd:COG4886 109 LSNLTNLESLDLSGN-QLTDLPEELANLTNLKELDLSNN-QLTDLPEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKE 186
|
....*..
gi 1002277744 1760 LVLNKCN 1766
Cdd:COG4886 187 LDLSNNQ 193
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1674-1852 |
5.25e-07 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 54.55 E-value: 5.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1674 SDIVKFLQGCVNLLYLTIDSCiDLITLPEPIKNCHCLRKLEITNCwNFSVLPEWLGELTFLQKLDIQASKLEYLPqSIQR 1753
Cdd:COG4886 172 TDLPEELGNLTNLKELDLSNN-QITDLPEPLGNLTNLEELDLSGN-QLTDLPEPLANLTNLETLDLSNNQLTDLP-ELGN 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1754 LTALERLVLNKCNYklrercTSREDKEKIKHIKTIDMNEVPLMYLTPSYIMLLQQVTSSQFIDLHIGGLECMIGLREMEN 1833
Cdd:COG4886 249 LTNLEELDLSNNQL------TDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTT 322
|
170
....*....|....*....
gi 1002277744 1834 LELQTKKELSSLSLEWSYA 1852
Cdd:COG4886 323 LLLLLLLLKGLLVTLTTLA 341
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
586-827 |
7.10e-07 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 54.17 E-value: 7.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 586 LSLLKYLNVSGLSGTLPKSLSKLHHLQALTLSTNIDLVELPSYICEFLKLQYLDLhgcskLKKLPDGIHKHKELQHLNLS 665
Cdd:COG4886 3 LLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLL-----RDLLLSSLLLLLSLLLLLLL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 666 DCTSLESLPLFSSQSGGLQKLSFLNVSHCSQLVKLSFLEEklekqpdhylpnmvhLNMSFCpKLQELPTGLfKHMRKLLF 745
Cdd:COG4886 78 SLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLES---------------LDLSGN-QLTDLPEEL-ANLTNLKE 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 746 LNFSGcTSLEDLPEFVehdAGCSMLEVLDLSGCaKLPALPESSTELRELRCLNLSGCsKLQNFLKLIPRWKfgTLEYLNI 825
Cdd:COG4886 141 LDLSN-NQLTDLPEPL---GNLTNLKSLDLSNN-QLTDLPEELGNLTNLKELDLSNN-QITDLPEPLGNLT--NLEELDL 212
|
..
gi 1002277744 826 SG 827
Cdd:COG4886 213 SG 214
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
970-1106 |
1.62e-06 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 53.01 E-value: 1.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 970 AVLGNLRphrNLQSLSIKGYICTEFPDWINKindtLPDLVKLVFSDiNGCNYIP--ISQLPNLKELEI--NNMPRLNKIY 1045
Cdd:COG4886 153 EPLGNLT---NLKSLDLSNNQLTDLPEELGN----LTNLKELDLSN-NQITDLPepLGNLTNLEELDLsgNQLTDLPEPL 224
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002277744 1046 GTLPNLVKLILSH--IErcdHIPVLGNLPNLQELEIYNMpQLHDarIGPCNKLRRLTLVGLPN 1106
Cdd:COG4886 225 ANLTNLETLDLSNnqLT---DLPELGNLTNLEELDLSNN-QLTD--LPPLANLTNLKTLDLSN 281
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1881-2076 |
1.62e-06 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 53.01 E-value: 1.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1881 SLEILCIKNYAGVDFPRWMSLLPNLVQLKIVGMQFEYLH--LDQFQNLKELFLSRVQFAHL--HLNGLQNLIELSLSGLK 1956
Cdd:COG4886 160 NLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQITDLPepLGNLTNLEELDLSGNQLTDLpePLANLTNLETLDLSNNQ 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1957 FGHL-HIDQLQNLRELKVSGVEFQHL-HLERLQNITELKLSEERFERLHIDQLQNLKELKFSSVEFGHLHLERLQSITKL 2034
Cdd:COG4886 240 LTDLpELGNLTNLEELDLSNNQLTDLpPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLL 319
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1002277744 2035 ELCKKQFEHLHLVQLENLRQLYLFTVKFECVVLHQLQNLEEL 2076
Cdd:COG4886 320 LTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSL 361
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
1522-1792 |
1.11e-05 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 51.03 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1522 SLPNLVTVKLSNIANCQCLPPLGQLANLEVLHISDMPSVRKVDGHVygteKPFRKLRELELSTMKNLEewltttLLLTGH 1601
Cdd:PLN03210 632 SLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSI----QYLNKLEDLDMSRCENLE------ILPTGI 701
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1602 NDHQLSRseevfpnlqvLLIANCPRMRFVPGFPrSRECTLEKSYSILLSFEQFIGSSNLALIALKINDSGSSSDIVKFLQ 1681
Cdd:PLN03210 702 NLKSLYR----------LNLSGCSRLKSFPDIS-TNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLT 770
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1682 GCVNLL-----YLTIDSCIDLITLPEPIKNCHCLRKLEITNCWNFSVLP-----EWLGEL---------------TFLQK 1736
Cdd:PLN03210 771 PLMTMLspsltRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPtginlESLESLdlsgcsrlrtfpdisTNISD 850
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1002277744 1737 LDIQASKLEYLPQSIQRLTALERLVLNKCNYKLRerctSREDKEKIKHIKTIDMNE 1792
Cdd:PLN03210 851 LNLSRTGIEEVPWWIEKFSNLSFLDMNGCNNLQR----VSLNISKLKHLETVDFSD 902
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
592-666 |
1.57e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 50.20 E-value: 1.57e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1002277744 592 LNVSGLSGTLPKSLSKLHHLQALTLSTNIDLVELPSYICEFLKLQYLDLHGCSKLKKLPDGIHKHKELQHLNLSD 666
Cdd:PLN03150 425 LDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
565-799 |
6.64e-05 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 48.31 E-value: 6.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 565 FLRILDFSACTIN-ELPDSISHLSL-LKYLNVSG--LSGTLPKSlsKLHHLQALTLSTNIDLVELPSYICEFLKLQYLDL 640
Cdd:PLN00113 94 YIQTINLSNNQLSgPIPDDIFTTSSsLRYLNLSNnnFTGSIPRG--SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 641 HGCSKLKKLPDGIHKHKELQHLNLSDCTSLESLPLFSSQSGGLQ--KLSFLNVS-----HCSQLVKLSFLE---EKLEKQ 710
Cdd:PLN00113 172 GGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKwiYLGYNNLSgeipyEIGGLTSLNHLDlvyNNLTGP 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 711 PDHYLPNMVHLNMSFC--PKLQ-ELPTGLFKhMRKLLFLNFSGCTSLEDLPEFVehdAGCSMLEVLDLSGCAKLPALPES 787
Cdd:PLN00113 252 IPSSLGNLKNLQYLFLyqNKLSgPIPPSIFS-LQKLISLDLSDNSLSGEIPELV---IQLQNLEILHLFSNNFTGKIPVA 327
|
250
....*....|..
gi 1002277744 788 STELRELRCLNL 799
Cdd:PLN00113 328 LTSLPRLQVLQL 339
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
1986-2093 |
2.74e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 41.70 E-value: 2.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002277744 1986 LQNITELKLSEERFERLH-IDQLQNLKELkfssvefgHLHLERLQSITKLELCKkQFEHLHL-----------VQLENLR 2053
Cdd:cd21340 1 LKRITHLYLNDKNITKIDnLSLCKNLKVL--------YLYDNKITKIENLEFLT-NLTHLYLqnnqiekienlENLVNLK 71
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1002277744 2054 QLYLFTVKFECVV-LHQLQNLEELHlsqIESQKSNKPVCIE 2093
Cdd:cd21340 72 KLYLGGNRISVVEgLENLTNLEELH---IENQRLPPGEKLT 109
|
|
| |
