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Conserved domains on  [gi|1002280144|ref|XP_015644378|]
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receptor-like protein EIX2 [Oryza sativa Japonica Group]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 13745945)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

CATH:  3.80.10.10
Gene Ontology:  GO:0005515
PubMed:  11751054|7583641|14747988
SCOP:  4003523

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN00113 super family cl33413
leucine-rich repeat receptor-like protein kinase; Provisional
 290-923 6.17e-76

leucine-rich repeat receptor-like protein kinase; Provisional


The actual alignment was detected with superfamily member PLN00113:

Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 269.03  E-value: 6.17e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 290 HLEGEIPQHMSRLCSLNIIDMSRNNLSGNITaeKNLFSCMKELQVLKVGFNNLTGNLSGwlEHLTGLTTLDLSKNSFTGQ 369
Cdd:PLN00113   80 NISGKISSAIFRLPYIQTINLSNNQLSGPIP--DDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGE 155

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 370 IPEDIGKLSQLIYLDLSYNAFGGRLSeVHLGNLSRLDFLSLASNklkiviepnwmptfQLTGlglhgchvgpHIPAWLRS 449
Cdd:PLN00113  156 IPNDIGSFSSLKVLDLGGNVLVGKIP-NSLTNLTSLEFLTLASN--------------QLVG----------QIPRELGQ 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 450 QTKIKMIDLGSTKITGTLPDWLWNFSSsITTLDISSNSITGHLPTSLVHMKMLSTFNMRSNVLEGGIPGLPASVK---VL 526
Cdd:PLN00113  211 MKSLKWIYLGYNNLSGEIPYEIGGLTS-LNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQkliSL 289

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 527 DLSKNFLSGSLPQSLGAKYAYYI-KLSDNQLNGTIPAYLCEMDSMELVDLSNNLFSGVLPDCWKNSSRLHTIDFSNNNLH 605
Cdd:PLN00113  290 DLSDNSLSGEIPELVIQLQNLEIlHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLT 369

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 606 GEIPSTMGFITSLAILSLRENSLSGTLPSSLQSCNGLIILDLGSNSLSGSLPSWLgDSLGSLITLSLRSNQFSGEIPESL 685
Cdd:PLN00113  370 GEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEF-TKLPLVYFLDISNNNLQGRINSRK 448

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 686 PQLHALQNLDLASNKLSGPVPQFLGnltsmcvdhgyavmipsakfatvytdgrtylaihvyTDKLESysstydyplnfID 765
Cdd:PLN00113  449 WDMPSLQMLSLARNKFFGGLPDSFG------------------------------------SKRLEN-----------LD 481

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 766 LSRNQFTGEIPREIGAISFLLALNLSGNHILGSIPDEIGNLSHLEALDLSSNDLSGSIPPSITDLINLSVLNLSYNDLSG 845
Cdd:PLN00113  482 LSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSG 561

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 846 VI------------------------PCSSQFSTFTDEPYLGNADLCGNCGASLSRICSQHTTTRKhqnmidRGTYLCTL 901
Cdd:PLN00113  562 EIpknlgnveslvqvnishnhlhgslPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPS------WWFYITCT 635

                         650       660
                  ....*....|....*....|..
gi 1002280144 902 LGFAYGLSVVSAILIFSRTARN 923
Cdd:PLN00113  636 LGAFLVLALVAFGFVFIRGRNN 657
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
99-415 3.49e-16

Leucine-rich repeat (LRR) protein [Transcription];


:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 81.90  E-value: 3.49e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144  99 NSSLAALTHLRYLNLSGNDFggVAIPDFIGSFSKLRHLDLSHAGFAGLvPPQLGNLSMLSHLALNSSTIRmDNFHWVSRL 178
Cdd:COG4886   106 NEELSNLTNLESLDLSGNQL--TDLPEELANLTNLKELDLSNNQLTDL-PEPLGNLTNLKSLDLSNNQLT-DLPEELGNL 181

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 179 RALRYLDLGRLYLvacSDWLQAISSLPLLQVLRLNDAFLpaTSLnSVSYVNFTALTVLDLSNNELnSTLPrWIWSLHSLS 258
Cdd:COG4886   182 TNLKELDLSNNQI---TDLPEPLGNLTNLEELDLSGNQL--TDL-PEPLANLTNLETLDLSNNQL-TDLP-ELGNLTNLE 253

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 259 YLDLSSCQLSgsvpdnignlsslsflqlldnhlegEIPqHMSRLCSLNIIDMSRNNLSGNITAEKNLFSCMKELQVLKVG 338
Cdd:COG4886   254 ELDLSNNQLT-------------------------DLP-PLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLL 307

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1002280144 339 FNNLTGNLSGWLEHLTGLTTLDLSKNSFTGQIPEDIGKLSQLIYLDLSYNAFGGRLSEVHLGNLSRLDFLSLASNKL 415
Cdd:COG4886   308 LNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLAL 384
LRRNT_2 pfam08263
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
 39-76 3.96e-05

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


:

Pssm-ID: 462411 [Multi-domain]  Cd Length: 41  Bit Score: 41.51  E-value: 3.96e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1002280144  39 SERDALLAFKAGLcADSAGELPSWQGH--DCCSWGSVSCN 76
Cdd:pfam08263   3 DDGQALLAFKSSL-NDPPGALSSWNSSssDPCSWTGVTCD 41
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 290-923 6.17e-76

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 269.03  E-value: 6.17e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 290 HLEGEIPQHMSRLCSLNIIDMSRNNLSGNITaeKNLFSCMKELQVLKVGFNNLTGNLSGwlEHLTGLTTLDLSKNSFTGQ 369
Cdd:PLN00113   80 NISGKISSAIFRLPYIQTINLSNNQLSGPIP--DDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGE 155

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 370 IPEDIGKLSQLIYLDLSYNAFGGRLSeVHLGNLSRLDFLSLASNklkiviepnwmptfQLTGlglhgchvgpHIPAWLRS 449
Cdd:PLN00113  156 IPNDIGSFSSLKVLDLGGNVLVGKIP-NSLTNLTSLEFLTLASN--------------QLVG----------QIPRELGQ 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 450 QTKIKMIDLGSTKITGTLPDWLWNFSSsITTLDISSNSITGHLPTSLVHMKMLSTFNMRSNVLEGGIPGLPASVK---VL 526
Cdd:PLN00113  211 MKSLKWIYLGYNNLSGEIPYEIGGLTS-LNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQkliSL 289

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 527 DLSKNFLSGSLPQSLGAKYAYYI-KLSDNQLNGTIPAYLCEMDSMELVDLSNNLFSGVLPDCWKNSSRLHTIDFSNNNLH 605
Cdd:PLN00113  290 DLSDNSLSGEIPELVIQLQNLEIlHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLT 369

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 606 GEIPSTMGFITSLAILSLRENSLSGTLPSSLQSCNGLIILDLGSNSLSGSLPSWLgDSLGSLITLSLRSNQFSGEIPESL 685
Cdd:PLN00113  370 GEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEF-TKLPLVYFLDISNNNLQGRINSRK 448

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 686 PQLHALQNLDLASNKLSGPVPQFLGnltsmcvdhgyavmipsakfatvytdgrtylaihvyTDKLESysstydyplnfID 765
Cdd:PLN00113  449 WDMPSLQMLSLARNKFFGGLPDSFG------------------------------------SKRLEN-----------LD 481

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 766 LSRNQFTGEIPREIGAISFLLALNLSGNHILGSIPDEIGNLSHLEALDLSSNDLSGSIPPSITDLINLSVLNLSYNDLSG 845
Cdd:PLN00113  482 LSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSG 561

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 846 VI------------------------PCSSQFSTFTDEPYLGNADLCGNCGASLSRICSQHTTTRKhqnmidRGTYLCTL 901
Cdd:PLN00113  562 EIpknlgnveslvqvnishnhlhgslPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPS------WWFYITCT 635

                         650       660
                  ....*....|....*....|..
gi 1002280144 902 LGFAYGLSVVSAILIFSRTARN 923
Cdd:PLN00113  636 LGAFLVLALVAFGFVFIRGRNN 657
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
525-854 2.23e-20

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 95.00  E-value: 2.23e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 525 VLDLSKNFLSGSLPQSLGAKYAYYIKLSDNQLNGTIPAYLCEMDSMELVDLSNNLFSGVLPDCWKNSSRLHTIDFSNNNL 604
Cdd:COG4886     2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 605 HGEIPSTMGFITSLAilSLRENSLSGTLPssLQSCNGLIILDLGSNSLSgSLPSWLGdSLGSLITLSLRSNQFSgEIPES 684
Cdd:COG4886    82 LSLLLLGLTDLGDLT--NLTELDLSGNEE--LSNLTNLESLDLSGNQLT-DLPEELA-NLTNLKELDLSNNQLT-DLPEP 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 685 LPQLHALQNLDLASNKLSGpVPQFLGNLTSmcvdhgyavmipsakfatvytdgrtylaihvytdklesysstydypLNFI 764
Cdd:COG4886   155 LGNLTNLKSLDLSNNQLTD-LPEELGNLTN----------------------------------------------LKEL 187

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 765 DLSRNQFTgEIPREIGAISFLLALNLSGNHIlGSIPDEIGNLSHLEALDLSSNDLSgSIpPSITDLINLSVLNLSYNDLS 844
Cdd:COG4886   188 DLSNNQIT-DLPEPLGNLTNLEELDLSGNQL-TDLPEPLANLTNLETLDLSNNQLT-DL-PELGNLTNLEELDLSNNQLT 263

                         330
                  ....*....|
gi 1002280144 845 GvIPCSSQFS 854
Cdd:COG4886   264 D-LPPLANLT 272
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
99-415 3.49e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 81.90  E-value: 3.49e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144  99 NSSLAALTHLRYLNLSGNDFggVAIPDFIGSFSKLRHLDLSHAGFAGLvPPQLGNLSMLSHLALNSSTIRmDNFHWVSRL 178
Cdd:COG4886   106 NEELSNLTNLESLDLSGNQL--TDLPEELANLTNLKELDLSNNQLTDL-PEPLGNLTNLKSLDLSNNQLT-DLPEELGNL 181

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 179 RALRYLDLGRLYLvacSDWLQAISSLPLLQVLRLNDAFLpaTSLnSVSYVNFTALTVLDLSNNELnSTLPrWIWSLHSLS 258
Cdd:COG4886   182 TNLKELDLSNNQI---TDLPEPLGNLTNLEELDLSGNQL--TDL-PEPLANLTNLETLDLSNNQL-TDLP-ELGNLTNLE 253

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 259 YLDLSSCQLSgsvpdnignlsslsflqlldnhlegEIPqHMSRLCSLNIIDMSRNNLSGNITAEKNLFSCMKELQVLKVG 338
Cdd:COG4886   254 ELDLSNNQLT-------------------------DLP-PLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLL 307

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1002280144 339 FNNLTGNLSGWLEHLTGLTTLDLSKNSFTGQIPEDIGKLSQLIYLDLSYNAFGGRLSEVHLGNLSRLDFLSLASNKL 415
Cdd:COG4886   308 LNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLAL 384
PLN03150 PLN03150
hypothetical protein; Provisional
 55-163 2.93e-11

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 67.15  E-value: 2.93e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144  55 SAGELPS---WQGHDCCS----WGSVSC--NKRTGH--VIGLDIGQYALSftGEINSSLAALTHLRYLNLSGNDFGGvAI 123
Cdd:PLN03150  382 SSLGLPLrfgWNGDPCVPqqhpWSGADCqfDSTKGKwfIDGLGLDNQGLR--GFIPNDISKLRHLQSINLSGNSIRG-NI 458

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1002280144 124 PDFIGSFSKLRHLDLSHAGFAGLVPPQLGNLSMLSHLALN 163
Cdd:PLN03150  459 PPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498
LRR_8 pfam13855
Leucine rich repeat;
205-267 4.81e-06

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 44.82  E-value: 4.81e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002280144 205 PLLQVLRLNDAFLpaTSLNSVSYVNFTALTVLDLSNNELNSTLPRWIWSLHSLSYLDLSSCQL 267
Cdd:pfam13855   1 PNLRSLDLSNNRL--TSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
LRRNT_2 pfam08263
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
 39-76 3.96e-05

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


Pssm-ID: 462411 [Multi-domain]  Cd Length: 41  Bit Score: 41.51  E-value: 3.96e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1002280144  39 SERDALLAFKAGLcADSAGELPSWQGH--DCCSWGSVSCN 76
Cdd:pfam08263   3 DDGQALLAFKSSL-NDPPGALSSWNSSssDPCSWTGVTCD 41
LRR_8 pfam13855
Leucine rich repeat;
788-843 9.80e-05

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 40.97  E-value: 9.80e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1002280144 788 LNLSGNHILGSIPDEIGNLSHLEALDLSSNDLSGSIPPSITDLINLSVLNLSYNDL 843
Cdd:pfam13855   6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 98-268 1.52e-04

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 45.04  E-value: 1.52e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144  98 INSSLAALTHLRYLNLSGNDFGGV-----AIPDFIGSFSKLRHLDLSHAGFAGLVPPQLGNL---SMLSHLALNSSTIRM 169
Cdd:cd00116    43 LASALRPQPSLKELCLSLNETGRIprglqSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLlrsSSLQELKLNNNGLGD 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 170 DNFHWVSR-LR----ALRYLDLGR--LYLVACSDWLQAISSLPLLQVLRL--NDAFLPATSLNSVSYVNFTALTVLDLSN 240
Cdd:cd00116   123 RGLRLLAKgLKdlppALEKLVLGRnrLEGASCEALAKALRANRDLKELNLanNGIGDAGIRALAEGLKANCNLEVLDLNN 202

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1002280144 241 NELNST----LPRWIWSLHSLSYLDLSSCQLS 268
Cdd:cd00116   203 NGLTDEgasaLAETLASLKSLEVLNLGDNNLT 234
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 492-702 1.68e-04

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 44.65  E-value: 1.68e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 492 LPTSLVHMKMLSTFNMRSNVLeGGIP--------GLPASVKV--LDLSKNFLSGSLPQSLGAKYAYY----IKLSDNQLN 557
Cdd:cd00116    43 LASALRPQPSLKELCLSLNET-GRIPrglqsllqGLTKGCGLqeLDLSDNALGPDGCGVLESLLRSSslqeLKLNNNGLG 121

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 558 GTIPAYLCE-----MDSMELVDLSNNLFSGVLPDCW----KNSSRLHTIDFSNNNLHGE-IPST---MGFITSLAILSLR 624
Cdd:cd00116   122 DRGLRLLAKglkdlPPALEKLVLGRNRLEGASCEALakalRANRDLKELNLANNGIGDAgIRALaegLKANCNLEVLDLN 201

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 625 ENS--------LSGTLPSSLQscngLIILDLGSNSLSG----SLPSWLGDSLGSLITLSLRSNQFSGE----IPESLPQL 688
Cdd:cd00116   202 NNGltdegasaLAETLASLKS----LEVLNLGDNNLTDagaaALASALLSPNISLLTLSLSCNDITDDgakdLAEVLAEK 277

                         250
                  ....*....|....
gi 1002280144 689 HALQNLDLASNKLS 702
Cdd:cd00116   278 ESLLELDLRGNKFG 291
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 290-923 6.17e-76

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 269.03  E-value: 6.17e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 290 HLEGEIPQHMSRLCSLNIIDMSRNNLSGNITaeKNLFSCMKELQVLKVGFNNLTGNLSGwlEHLTGLTTLDLSKNSFTGQ 369
Cdd:PLN00113   80 NISGKISSAIFRLPYIQTINLSNNQLSGPIP--DDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGE 155

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 370 IPEDIGKLSQLIYLDLSYNAFGGRLSeVHLGNLSRLDFLSLASNklkiviepnwmptfQLTGlglhgchvgpHIPAWLRS 449
Cdd:PLN00113  156 IPNDIGSFSSLKVLDLGGNVLVGKIP-NSLTNLTSLEFLTLASN--------------QLVG----------QIPRELGQ 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 450 QTKIKMIDLGSTKITGTLPDWLWNFSSsITTLDISSNSITGHLPTSLVHMKMLSTFNMRSNVLEGGIPGLPASVK---VL 526
Cdd:PLN00113  211 MKSLKWIYLGYNNLSGEIPYEIGGLTS-LNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQkliSL 289

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 527 DLSKNFLSGSLPQSLGAKYAYYI-KLSDNQLNGTIPAYLCEMDSMELVDLSNNLFSGVLPDCWKNSSRLHTIDFSNNNLH 605
Cdd:PLN00113  290 DLSDNSLSGEIPELVIQLQNLEIlHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLT 369

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 606 GEIPSTMGFITSLAILSLRENSLSGTLPSSLQSCNGLIILDLGSNSLSGSLPSWLgDSLGSLITLSLRSNQFSGEIPESL 685
Cdd:PLN00113  370 GEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEF-TKLPLVYFLDISNNNLQGRINSRK 448

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 686 PQLHALQNLDLASNKLSGPVPQFLGnltsmcvdhgyavmipsakfatvytdgrtylaihvyTDKLESysstydyplnfID 765
Cdd:PLN00113  449 WDMPSLQMLSLARNKFFGGLPDSFG------------------------------------SKRLEN-----------LD 481

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 766 LSRNQFTGEIPREIGAISFLLALNLSGNHILGSIPDEIGNLSHLEALDLSSNDLSGSIPPSITDLINLSVLNLSYNDLSG 845
Cdd:PLN00113  482 LSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSG 561

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 846 VI------------------------PCSSQFSTFTDEPYLGNADLCGNCGASLSRICSQHTTTRKhqnmidRGTYLCTL 901
Cdd:PLN00113  562 EIpknlgnveslvqvnishnhlhgslPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPS------WWFYITCT 635

                         650       660
                  ....*....|....*....|..
gi 1002280144 902 LGFAYGLSVVSAILIFSRTARN 923
Cdd:PLN00113  636 LGAFLVLALVAFGFVFIRGRNN 657
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 40-706 5.65e-74

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 263.25  E-value: 5.65e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144  40 ERDALLAFKAGLcADSAGELPSWQG-HDCCSWGSVSCNKrTGHVIGLDIGQYALSftGEINSSLAALTHLRYLNLSGNDF 118
Cdd:PLN00113   30 ELELLLSFKSSI-NDPLKYLSNWNSsADVCLWQGITCNN-SSRVVSIDLSGKNIS--GKISSAIFRLPYIQTINLSNNQL 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 119 GGVAIPDFIGSFSKLRHLDLSHAGFAGLVPPqlgnlsmlshlalnsstirmdnfhwvsrlralryldlgrlylvacsdwl 198
Cdd:PLN00113  106 SGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR------------------------------------------------- 136

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 199 qaiSSLPLLQVLrlndaflpatslnsvsyvnftaltvlDLSNNELNSTLPRWIWSLHSLSYLDLSSCQLSGSVPDNIGNL 278
Cdd:PLN00113  137 ---GSIPNLETL--------------------------DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNL 187

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 279 SSLSFLQLLDNHLEGEIPQHMSRLCSLNIIDMSRNNLSGNITAEKNLFSCMKELQVLkvgFNNLTGNLSGWLEHLTGLTT 358
Cdd:PLN00113  188 TSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLV---YNNLTGPIPSSLGNLKNLQY 264

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 359 LDLSKNSFTGQIPEDIGKLSQLIYLDLSYNAFGGRLSEVhLGNLSRLDFLSLASNKLkiviepnwmptfqlTGlglhgch 438
Cdd:PLN00113  265 LFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPEL-VIQLQNLEILHLFSNNF--------------TG------- 322

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 439 vgpHIPAWLRSQTKIKMIDLGSTKITGTLPDWLWNfSSSITTLDISSNSITGHLPTSLVHMKMLSTFNMRSNVLEGGIP- 517
Cdd:PLN00113  323 ---KIPVALTSLPRLQVLQLWSNKFSGEIPKNLGK-HNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPk 398

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 518 --GLPASVKVLDLSKNFLSGSLPQSLGA-KYAYYIKLSDNQLNGTIPAYLCEMDSMELVDLSNNLFSGVLPDCWKnSSRL 594
Cdd:PLN00113  399 slGACRSLRRVRLQDNSFSGELPSEFTKlPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG-SKRL 477

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 595 HTIDFSNNNLHGEIPSTMGFITSLAILSLRENSLSGTLPSSLQSCNGLIILDLGSNSLSGSLPSWLGDsLGSLITLSLRS 674
Cdd:PLN00113  478 ENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSE-MPVLSQLDLSQ 556

                         650       660       670
                  ....*....|....*....|....*....|..
gi 1002280144 675 NQFSGEIPESLPQLHALQNLDLASNKLSGPVP 706
Cdd:PLN00113  557 NQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 229-825 1.21e-67

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 245.14  E-value: 1.21e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 229 NFTALTVLDLSNNELNSTLPRWIWSLHSLSYLDLSSCQLSGSVPDNIGNLSSLSF-LQLLDNHLEGEIPQhmSRLCSLNI 307
Cdd:PLN00113   67 NSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRyLNLSNNNFTGSIPR--GSIPNLET 144

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 308 IDMSRNNLSGNITAEKNLFScmkELQVLKVGFNNLTGNLSGWLEHLTGLTTLDLSKNSFTGQIPEDIGKLSQLIYLDLSY 387
Cdd:PLN00113  145 LDLSNNMLSGEIPNDIGSFS---SLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGY 221

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 388 NAFGGRLSeVHLGNLSRLDFLSLASNKLKIVIEPNWMPTFQLTGLGLHGCHVGPHIPAWLRSQTKIKMIDLGSTKITGTL 467
Cdd:PLN00113  222 NNLSGEIP-YEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEI 300

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 468 PDWLWNFSSsITTLDISSNSITGHLPTSLVHMKMLSTFNMRSNVLEGGIP---GLPASVKVLDLSKNFLSGSLPQSL-GA 543
Cdd:PLN00113  301 PELVIQLQN-LEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPknlGKHNNLTVLDLSTNNLTGEIPEGLcSS 379

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 544 KYAYYIKLSDNQLNGTIPAYLCEMDSMELVDLSNNLFSGVLPDCWKNSSRLHTIDFSNNNLHGEIPSTMGFITSLAILSL 623
Cdd:PLN00113  380 GNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSL 459

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 624 RENSLSGTLPSSLQSCNgLIILDLGSNSLSGSLPSWLGdSLGSLITLSLRSNQFSGEIPESLPQLHALQNLDLASNKLSG 703
Cdd:PLN00113  460 ARNKFFGGLPDSFGSKR-LENLDLSRNQFSGAVPRKLG-SLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSG 537

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 704 PVPqflgnltsmcvdhgyavmipsakfatvytdgrtylaihvytdklesySSTYDYP-LNFIDLSRNQFTGEIPREIGAI 782
Cdd:PLN00113  538 QIP-----------------------------------------------ASFSEMPvLSQLDLSQNQLSGEIPKNLGNV 570

                         570       580       590       600
                  ....*....|....*....|....*....|....*....|....*...
gi 1002280144 783 SFLLALNLSGNHILGSIPDEIG----NLSHLEA-LDLSSNDLSGSIPP 825
Cdd:PLN00113  571 ESLVQVNISHNHLHGSLPSTGAflaiNASAVAGnIDLCGGDTTSGLPP 618
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 473-850 4.43e-45

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 176.58  E-value: 4.43e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 473 NFSSSITTLDISSNSITGHLPTSLVHMKMLSTFNMRSNVLEGGIPG----LPASVKVLDLSKNFLSGSLPQSlGAKYAYY 548
Cdd:PLN00113   66 NNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDdiftTSSSLRYLNLSNNNFTGSIPRG-SIPNLET 144

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 549 IKLSDNQLNGTIPAYLCEMDSMELVDLSNNLFSGVLPDCWKNSSRLHTIDFSNNNLHGEIPSTMGFITSLAILSLRENSL 628
Cdd:PLN00113  145 LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNL 224

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 629 SGTLPSSLQSCNGLIILDLGSNSLSGSLPSWLGDsLGSLITLSLRSNQFSGEIPESLPQLHALQNLDLASNKLSGPVPQF 708
Cdd:PLN00113  225 SGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGN-LKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPEL 303

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 709 LGNLTSMCVDHgyavmipsakfatvytdgrtylaihvytdklesysstydyplnfidLSRNQFTGEIPREIGAISFLLAL 788
Cdd:PLN00113  304 VIQLQNLEILH----------------------------------------------LFSNNFTGKIPVALTSLPRLQVL 337

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1002280144 789 NLSGNHILGSIPDEIGNLSHLEALDLSSNDLSGSIPPSITDLINLSVLNLSYNDLSGVIPCS 850
Cdd:PLN00113  338 QLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKS 399
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
525-854 2.23e-20

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 95.00  E-value: 2.23e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 525 VLDLSKNFLSGSLPQSLGAKYAYYIKLSDNQLNGTIPAYLCEMDSMELVDLSNNLFSGVLPDCWKNSSRLHTIDFSNNNL 604
Cdd:COG4886     2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 605 HGEIPSTMGFITSLAilSLRENSLSGTLPssLQSCNGLIILDLGSNSLSgSLPSWLGdSLGSLITLSLRSNQFSgEIPES 684
Cdd:COG4886    82 LSLLLLGLTDLGDLT--NLTELDLSGNEE--LSNLTNLESLDLSGNQLT-DLPEELA-NLTNLKELDLSNNQLT-DLPEP 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 685 LPQLHALQNLDLASNKLSGpVPQFLGNLTSmcvdhgyavmipsakfatvytdgrtylaihvytdklesysstydypLNFI 764
Cdd:COG4886   155 LGNLTNLKSLDLSNNQLTD-LPEELGNLTN----------------------------------------------LKEL 187

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 765 DLSRNQFTgEIPREIGAISFLLALNLSGNHIlGSIPDEIGNLSHLEALDLSSNDLSgSIpPSITDLINLSVLNLSYNDLS 844
Cdd:COG4886   188 DLSNNQIT-DLPEPLGNLTNLEELDLSGNQL-TDLPEPLANLTNLETLDLSNNQLT-DL-PELGNLTNLEELDLSNNQLT 263

                         330
                  ....*....|
gi 1002280144 845 GvIPCSSQFS 854
Cdd:COG4886   264 D-LPPLANLT 272
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
229-505 2.56e-20

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 94.62  E-value: 2.56e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 229 NFTALTVLDLSNNELnSTLPRWIWSLHSLSYLDLSSCQLSgSVPDNIGNLSSLSFLQLLDNHLEgEIPQHMSRLCSLNII 308
Cdd:COG4886   111 NLTNLESLDLSGNQL-TDLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQLT-DLPEELGNLTNLKEL 187

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 309 DMSRNNLSgNITAEknlFSCMKELQVLKVGFNNLTgNLSGWLEHLTGLTTLDLSKNSFTgQIPEdIGKLSQLIYLDLSYN 388
Cdd:COG4886   188 DLSNNQIT-DLPEP---LGNLTNLEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQLT-DLPE-LGNLTNLEELDLSNN 260

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 389 AFGGRLSEVHLGNLSRLDFLS--LASNKLKIVIEPNWMPTFQLTGLGLHGCHVGPHIPAWLRSQTKIKMIDLGSTKITGT 466
Cdd:COG4886   261 QLTDLPPLANLTNLKTLDLSNnqLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTL 340

                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1002280144 467 LPDWLWNFSSSITTLDISSNSITGHLPTSLVHMKMLSTF 505
Cdd:COG4886   341 ALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATL 379
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
473-851 9.63e-20

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 93.07  E-value: 9.63e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 473 NFSSSITTLDISSNSITGHLPTSLVHMKMLSTFNMRSNVLEGGIPGLPASVKVLDLSKNFLSGSLPQSLGAKYAYYIKLS 552
Cdd:COG4886     1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 553 DNQLNGTIPAYLCEMDSMELVDLSNNLFSGVLPDcwknssrLHTIDFSNNNLhGEIPSTMGFITSLAILSLRENSLSgTL 632
Cdd:COG4886    81 LLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTN-------LESLDLSGNQL-TDLPEELANLTNLKELDLSNNQLT-DL 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 633 PSSLQSCNGLIILDLGSNSLSgSLPSWLGdSLGSLITLSLRSNQFSgEIPESLPQLHALQNLDLASNKLSgPVPQFLGNL 712
Cdd:COG4886   152 PEPLGNLTNLKSLDLSNNQLT-DLPEELG-NLTNLKELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQLT-DLPEPLANL 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 713 TSmcvdhgyavmipsakfatvytdgrtylaihvytdklesysstydypLNFIDLSRNQFTgEIPrEIGAISFLLALNLSG 792
Cdd:COG4886   228 TN----------------------------------------------LETLDLSNNQLT-DLP-ELGNLTNLEELDLSN 259

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1002280144 793 NHIlGSIPDEiGNLSHLEALDLSSNDLSGSIPPSITDLINLSVLNLSYNDLSGVIPCSS 851
Cdd:COG4886   260 NQL-TDLPPL-ANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLIL 316
PLN03150 PLN03150
hypothetical protein; Provisional
 764-876 7.27e-18

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 88.72  E-value: 7.27e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 764 IDLSRNQFTGEIPREIGAISFLLALNLSGNHILGSIPDEIGNLSHLEALDLSSNDLSGSIPPSITDLINLSVLNLSYNDL 843
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1002280144 844 SGVIPCS--------SQFStFTDepylgNADLCG-----NCGASLS 876
Cdd:PLN03150  503 SGRVPAAlggrllhrASFN-FTD-----NAGLCGipglrACGPHLS 542
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
452-714 6.35e-17

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 84.21  E-value: 6.35e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 452 KIKMIDLGSTKITGTLPDWLWNFSSSITTLDISSNSITGHLPTSLVHMKMLSTFNMRSNVLEGGIPGLPASVKVLDLSKN 531
Cdd:COG4886    27 LLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 532 FLSGSLPQslgakyAYYIKLSDNQLNgTIPAYLCEMDSMELVDLSNNLFSgVLPDCWKNSSRLHTIDFSNNNLHgEIPST 611
Cdd:COG4886   107 EELSNLTN------LESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQLT-DLPEE 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 612 MGFITSLAILSLRENSLSgTLPSSLQSCNGLIILDLGSNSLSgSLPSWLGdSLGSLITLSLRSNQFSgEIPEsLPQLHAL 691
Cdd:COG4886   178 LGNLTNLKELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQLT-DLPEPLA-NLTNLETLDLSNNQLT-DLPE-LGNLTNL 252

                         250       260
                  ....*....|....*....|....
gi 1002280144 692 QNLDLASNKLSG-PVPQFLGNLTS 714
Cdd:COG4886   253 EELDLSNNQLTDlPPLANLTNLKT 276
PLN03150 PLN03150
hypothetical protein; Provisional
 565-661 1.29e-16

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 84.48  E-value: 1.29e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 565 CEMDS------MELVDLSNNLFSGVLPDCWKNSSRLHTIDFSNNNLHGEIPSTMGFITSLAILSLRENSLSGTLPSSLQS 638
Cdd:PLN03150  409 CQFDStkgkwfIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQ 488

                          90       100
                  ....*....|....*....|...
gi 1002280144 639 CNGLIILDLGSNSLSGSLPSWLG 661
Cdd:PLN03150  489 LTSLRILNLNGNSLSGRVPAALG 511
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
99-415 3.49e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 81.90  E-value: 3.49e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144  99 NSSLAALTHLRYLNLSGNDFggVAIPDFIGSFSKLRHLDLSHAGFAGLvPPQLGNLSMLSHLALNSSTIRmDNFHWVSRL 178
Cdd:COG4886   106 NEELSNLTNLESLDLSGNQL--TDLPEELANLTNLKELDLSNNQLTDL-PEPLGNLTNLKSLDLSNNQLT-DLPEELGNL 181

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 179 RALRYLDLGRLYLvacSDWLQAISSLPLLQVLRLNDAFLpaTSLnSVSYVNFTALTVLDLSNNELnSTLPrWIWSLHSLS 258
Cdd:COG4886   182 TNLKELDLSNNQI---TDLPEPLGNLTNLEELDLSGNQL--TDL-PEPLANLTNLETLDLSNNQL-TDLP-ELGNLTNLE 253

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 259 YLDLSSCQLSgsvpdnignlsslsflqlldnhlegEIPqHMSRLCSLNIIDMSRNNLSGNITAEKNLFSCMKELQVLKVG 338
Cdd:COG4886   254 ELDLSNNQLT-------------------------DLP-PLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLL 307

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1002280144 339 FNNLTGNLSGWLEHLTGLTTLDLSKNSFTGQIPEDIGKLSQLIYLDLSYNAFGGRLSEVHLGNLSRLDFLSLASNKL 415
Cdd:COG4886   308 LNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLAL 384
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
458-844 8.56e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 80.75  E-value: 8.56e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 458 LGSTKITGTLPDWLWNFSSSITTLDISSNSITGHLPTSLVHMKMLSTFNMRSNVLEGGIPGLPASVKVLDLSKNFLSGSL 537
Cdd:COG4886     5 LLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 538 PQSLGAKYAYYIKLSDNQLNGTIPayLCEMDSMELVDLSNNLFSgVLPDCWKNSSRLHTIDFSNNNLHgEIPSTMGFITS 617
Cdd:COG4886    85 LLLGLTDLGDLTNLTELDLSGNEE--LSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTN 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 618 LAILSLRENSLSgTLPSSLQSCNGLIILDLGSNSLSgSLPSWLGDsLGSLITLSLRSNQFSgEIPESLPQLHALQNLDLA 697
Cdd:COG4886   161 LKSLDLSNNQLT-DLPEELGNLTNLKELDLSNNQIT-DLPEPLGN-LTNLEELDLSGNQLT-DLPEPLANLTNLETLDLS 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 698 SNKLSgPVPQfLGNLTSMcvdhgyavmipsakfatvytdgrTYLAIHvyTDKLESYSSTYDYP-LNFIDLSRNQFTGEIP 776
Cdd:COG4886   237 NNQLT-DLPE-LGNLTNL-----------------------EELDLS--NNQLTDLPPLANLTnLKTLDLSNNQLTDLKL 289

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1002280144 777 REIGAISFLLALNLSGNHILGSIPDEIGNLSHLEALDLSSNDLSGSIPPSITDLINLSVLNLSYNDLS 844
Cdd:COG4886   290 KELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLN 357
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
206-416 8.71e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 80.75  E-value: 8.71e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 206 LLQVLRLNDAFLPATSLNSVSYVNFTALTVLDLSNNELnstlprwIWSLHSLSYLDLSSCQLSgSVPDNIGNLSSLSFLQ 285
Cdd:COG4886    71 LLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEE-------LSNLTNLESLDLSGNQLT-DLPEELANLTNLKELD 142

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 286 LLDNHLEgEIPQHMSRLCSLNIIDMSRNNLSgNITAEknlFSCMKELQVLKVGFNNLTgNLSGWLEHLTGLTTLDLSKNS 365
Cdd:COG4886   143 LSNNQLT-DLPEPLGNLTNLKSLDLSNNQLT-DLPEE---LGNLTNLKELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQ 216

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1002280144 366 FTgQIPEDIGKLSQLIYLDLSYNafggRLSEV-HLGNLSRLDFLSLASNKLK 416
Cdd:COG4886   217 LT-DLPEPLANLTNLETLDLSNN----QLTDLpELGNLTNLEELDLSNNQLT 263
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
98-434 4.46e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 75.36  E-value: 4.46e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144  98 INSSLAALTHLRYLNLSGNdfggvaipDFIGSFSKLRHLDLSHAGFAGLvPPQLGNLSMLSHLALNSSTIRmDNFHWVSR 177
Cdd:COG4886    88 GLTDLGDLTNLTELDLSGN--------EELSNLTNLESLDLSGNQLTDL-PEELANLTNLKELDLSNNQLT-DLPEPLGN 157

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 178 LRALRYLDLGRLYLVACSDwlqAISSLPLLQVLRLNDaflpaTSLNSVSYV--NFTALTVLDLSNNELnSTLPRWIWSLH 255
Cdd:COG4886   158 LTNLKSLDLSNNQLTDLPE---ELGNLTNLKELDLSN-----NQITDLPEPlgNLTNLEELDLSGNQL-TDLPEPLANLT 228

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 256 SLSYLDLSSCQLSgsvpdnignlsslsflqlldnhlegEIPQhMSRLCSLNIIDMSRNNLSgNITAEKNLfscmKELQVL 335
Cdd:COG4886   229 NLETLDLSNNQLT-------------------------DLPE-LGNLTNLEELDLSNNQLT-DLPPLANL----TNLKTL 277

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 336 KVGFNNLTGNLSGWLEHLTGLTTLDLSKNSFTGQIPEDIGKLSQLIYLDLSYNAFGGRLSEVHLGNLSRLDFLSLASNKL 415
Cdd:COG4886   278 DLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLN 357

                         330
                  ....*....|....*....
gi 1002280144 416 KIVIEPNWMPTFQLTGLGL 434
Cdd:COG4886   358 LLSLLLTLLLTLGLLGLLE 376
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
302-701 5.57e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 75.36  E-value: 5.57e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 302 LCSLNIIDMSRNNLSGNITAEKNLFSCMKELQVLKVGFNNLTGNLSGWLEH------LTGLTTLDLSKNSFTGQIPEDIG 375
Cdd:COG4886    14 LLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSlllllsLLLLLLLSLLLLSLLLLGLTDLG 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 376 KLSQLIYLDLSYNAfggrlsevHLGNLSRLDFLSLASNKLKiviepnwmptfqltglglhgchvgpHIPAWLRSQTKIKM 455
Cdd:COG4886    94 DLTNLTELDLSGNE--------ELSNLTNLESLDLSGNQLT-------------------------DLPEELANLTNLKE 140

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 456 IDLGSTKITgTLPDWLWNFSSsITTLDISSNSITGhLPTSLVHMKMLstfnmrsnvleggipglpasvKVLDLSKNFLSg 535
Cdd:COG4886   141 LDLSNNQLT-DLPEPLGNLTN-LKSLDLSNNQLTD-LPEELGNLTNL---------------------KELDLSNNQIT- 195

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 536 SLPQSLGA-KYAYYIKLSDNQLNgTIPAYLCEMDSMELVDLSNNLFSgVLPDcWKNSSRLHTIDFSNNNLhGEIPSTMGF 614
Cdd:COG4886   196 DLPEPLGNlTNLEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQLT-DLPE-LGNLTNLEELDLSNNQL-TDLPPLANL 271

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 615 iTSLAILSLRENSLSGTLPSSLQSCNGLIILDLGSNSLSGSLPSWLGDSLGSLITLSLRSNQFSGEIPESLPQLHALQNL 694
Cdd:COG4886   272 -TNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALL 350


                  ....*..
gi 1002280144 695 DLASNKL 701
Cdd:COG4886   351 TLLLLLN 357
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
443-714 2.31e-12

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 69.96  E-value: 2.31e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 443 IPAWLRSQTKIKMIDLGSTKITGTLPDWLWNFSSSITTLDISSNSITGHLPTSLVHMKMLSTFNMRSNVLEGGIPGLpas 522
Cdd:COG4886    39 LLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNL--- 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 523 vKVLDLSKNFLSgSLPQSLGA-KYAYYIKLSDNQLNgTIPAYLCEMDSMELVDLSNNLFSGvLPDCWKNSSRLHTIDFSN 601
Cdd:COG4886   116 -ESLDLSGNQLT-DLPEELANlTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSN 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 602 NNLHgEIPSTMGFITSLAILSLRENSLSgTLPSSLQSCNGLIILDLGSNSLS-----GSLPS--WL------------GD 662
Cdd:COG4886   192 NQIT-DLPEPLGNLTNLEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQLTdlpelGNLTNleELdlsnnqltdlppLA 269

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1002280144 663 SLGSLITLSLRSNQFSGEIPESLPQLHALQNLDLASNKLSGPVPQFLGNLTS 714
Cdd:COG4886   270 NLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLT 321
PLN03150 PLN03150
hypothetical protein; Provisional
 553-636 1.07e-11

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 68.69  E-value: 1.07e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 553 DNQ-LNGTIPAYLCEMDSMELVDLSNNLFSGVLPDCWKNSSRLHTIDFSNNNLHGEIPSTMGFITSLAILSLRENSLSGT 631
Cdd:PLN03150  426 DNQgLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGR 505


                  ....*
gi 1002280144 632 LPSSL 636
Cdd:PLN03150  506 VPAAL 510
PLN03150 PLN03150
hypothetical protein; Provisional
 597-710 1.26e-11

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 68.69  E-value: 1.26e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 597 IDFSNNNLHGEIPSTMGFITSLAILSLRENSLSGTLPSSLQSCNGLIILDLGSNSLSGSlpswlgdslgslitlslrsnq 676
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGS--------------------- 481

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1002280144 677 fsgeIPESLPQLHALQNLDLASNKLSGPVPQFLG 710
Cdd:PLN03150  482 ----IPESLGQLTSLRILNLNGNSLSGRVPAALG 511
PLN03150 PLN03150
hypothetical protein; Provisional
 55-163 2.93e-11

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 67.15  E-value: 2.93e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144  55 SAGELPS---WQGHDCCS----WGSVSC--NKRTGH--VIGLDIGQYALSftGEINSSLAALTHLRYLNLSGNDFGGvAI 123
Cdd:PLN03150  382 SSLGLPLrfgWNGDPCVPqqhpWSGADCqfDSTKGKwfIDGLGLDNQGLR--GFIPNDISKLRHLQSINLSGNSIRG-NI 458

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1002280144 124 PDFIGSFSKLRHLDLSHAGFAGLVPPQLGNLSMLSHLALN 163
Cdd:PLN03150  459 PPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
97-397 3.81e-11

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 66.50  E-value: 3.81e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144  97 EINSSLAALTHLRYLNLSGNDFGGvaIPDFIGSFSKLRHLDLSHAGFAGLvPPQLGNLSMLSHLALNSSTIRmDNFHWVS 176
Cdd:COG4886   150 DLPEPLGNLTNLKSLDLSNNQLTD--LPEELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGNQLT-DLPEPLA 225

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 177 RLRALRYLDLGRlylvacsdwlQAISSLPLLQvlrlndaflpatslnsvsyvNFTALTVLDLSNNELnSTLPRwIWSLHS 256
Cdd:COG4886   226 NLTNLETLDLSN----------NQLTDLPELG--------------------NLTNLEELDLSNNQL-TDLPP-LANLTN 273

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 257 LSYLDLSSCQLSGSVPDNIGNLSSLSFLQLLDNHLEGEIPQHMSRLCSLNIIDMSRNNLSGNITAEKNLFSCMKELQVLK 336
Cdd:COG4886   274 LKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLL 353

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002280144 337 VGFNNLTGNLSGWLEHLTGLTTLDLSKNSFTGQIPEDIGKLSQLIYLDLSYNAFGGRLSEV 397
Cdd:COG4886   354 LLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALLDAVNTE 414
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
448-701 2.90e-09

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 60.87  E-value: 2.90e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 448 RSQTKIKMIDLGSTKITGTLPDwlwnfssSITTLDISSNSITGhLPTSLvhMKMLSTFNMRSNVLEGGIPGLPASVKVLD 527
Cdd:PRK15370  178 NNKTELRLKILGLTTIPACIPE-------QITTLILDNNELKS-LPENL--QGNIKTLYANSNQLTSIPATLPDTIQEME 247

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 528 LSKNFLSgSLPQSLgakyayyiklsdnqlngtiPAylcemdSMELVDLSNNLFSgVLPDCWKNSsrLHTIDFSNNNLHG- 606
Cdd:PRK15370  248 LSINRIT-ELPERL-------------------PS------ALQSLDLFHNKIS-CLPENLPEE--LRYLSVYDNSIRTl 298

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 607 --EIPSTmgfITSLAILSlreNSLSgTLPSSLQScnGLIILDLGSNSLSgSLPSWLGDSLGsliTLSLRSNQFSgEIPES 684
Cdd:PRK15370  299 paHLPSG---ITHLNVQS---NSLT-ALPETLPP--GLKTLEAGENALT-SLPASLPPELQ---VLDVSKNQIT-VLPET 364

                         250
                  ....*....|....*..
gi 1002280144 685 LPQlhALQNLDLASNKL 701
Cdd:PRK15370  365 LPP--TITTLDVSRNAL 379
PLN03150 PLN03150
hypothetical protein; Provisional
 324-445 4.37e-09

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 60.21  E-value: 4.37e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 324 NLFSCMKELQVLKVGFNNLTGNLSGWLEHLTGLTTLDLSKNSFTGQIPEDIGKLSQLIYLDLSYNAFGGRLSEVHLGNLS 403
Cdd:PLN03150  436 NDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLL 515

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1002280144 404 RLDFLSLASNKlkiviepnwmptfQLTGL-GLHGChvGPHIPA 445
Cdd:PLN03150  516 HRASFNFTDNA-------------GLCGIpGLRAC--GPHLSV 543
PLN03150 PLN03150
hypothetical protein; Provisional
 670-804 1.64e-08

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 58.29  E-value: 1.64e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 670 LSLRSNQFSGEIPESLPQLHALQNLDLASNKLSGPVPQFLGNLTSMCVdhgyavmipsakfatvytdgrtylaihvytdk 749
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEV-------------------------------- 470

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1002280144 750 lesysstydyplnfIDLSRNQFTGEIPREIGAISFLLALNLSGNHILGSIPDEIG 804
Cdd:PLN03150  471 --------------LDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALG 511
PLN03150 PLN03150
hypothetical protein; Provisional
 645-715 2.67e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 51.36  E-value: 2.67e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002280144 645 LDLGSNSLSGSLPSWLgDSLGSLITLSLRSNQFSGEIPESLPQLHALQNLDLASNKLSGPVPQFLGNLTSM 715
Cdd:PLN03150  423 LGLDNQGLRGFIPNDI-SKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSL 492
PLN03150 PLN03150
hypothetical protein; Provisional
 236-321 4.14e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 50.58  E-value: 4.14e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 236 LDLSNNELNSTLPRWIWSLHSLSYLDLSSCQLSGSVPDNIGNLSSLSFLQLLDNHLEGEIPQHMSRLCSLNIIDMSRNNL 315
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502


                  ....*.
gi 1002280144 316 SGNITA 321
Cdd:PLN03150  503 SGRVPA 508
LRR_8 pfam13855
Leucine rich repeat;
205-267 4.81e-06

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 44.82  E-value: 4.81e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002280144 205 PLLQVLRLNDAFLpaTSLNSVSYVNFTALTVLDLSNNELNSTLPRWIWSLHSLSYLDLSSCQL 267
Cdd:pfam13855   1 PNLRSLDLSNNRL--TSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
PLN03150 PLN03150
hypothetical protein; Provisional
 478-585 8.20e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 49.81  E-value: 8.20e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 478 ITTLDISSNSITGHLPTSLVHMKMLSTFNMRSNVLEGGIP---GLPASVKVLDLSKNFLsgslpqslgakyayyiklsdn 554
Cdd:PLN03150  420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPpslGSITSLEVLDLSYNSF--------------------- 478

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1002280144 555 qlNGTIPAYLCEMDSMELVDLSNNLFSGVLP 585
Cdd:PLN03150  479 --NGSIPESLGQLTSLRILNLNGNSLSGRVP 507
PRK15387 PRK15387
type III secretion system effector E3 ubiquitin transferase SspH2;
478-714 2.95e-05

type III secretion system effector E3 ubiquitin transferase SspH2;


Pssm-ID: 185285 [Multi-domain]  Cd Length: 788  Bit Score: 48.23  E-value: 2.95e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 478 ITTLDISSNSITGH--LPTSLVHMKMLSTFNMRSNVLEGGI-------------PGLPASVKVLDLSKNFLSG--SLPQS 540
Cdd:PRK15387  244 LRTLEVSGNQLTSLpvLPPGLLELSIFSNPLTHLPALPSGLcklwifgnqltslPVLPPGLQELSVSDNQLASlpALPSE 323

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 541 LGAKYAYyiklsDNQLNG--TIPAYLCEMDsmelvdLSNNLFSGV--LPdcwknsSRLHTIDFSNNNLhGEIPSTMGFIT 616
Cdd:PRK15387  324 LCKLWAY-----NNQLTSlpTLPSGLQELS------VSDNQLASLptLP------SELYKLWAYNNRL-TSLPALPSGLK 385

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 617 SLAILSLRENSLSgTLPSSLQScngliiLDLGSNSLSG--SLPSwlgdslgSLITLSLRSNQFSgEIPESLPQLHALQNL 694
Cdd:PRK15387  386 ELIVSGNRLTSLP-VLPSELKE------LMVSGNRLTSlpMLPS-------GLLSLSVYRNQLT-RLPESLIHLSSETTV 450

                         250       260
                  ....*....|....*....|
gi 1002280144 695 DLASNKLSGPVPQFLGNLTS 714
Cdd:PRK15387  451 NLEGNPLSERTLQALREITS 470
PLN03150 PLN03150
hypothetical protein; Provisional
 431-544 3.60e-05

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 47.50  E-value: 3.60e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 431 GLGLHGCHVGPHIPAWLRSQTKIKMIDLGSTKITGTLPDWLWNFSSsITTLDISSNSITGHLPTSLvhmkmlstfnmrsn 510
Cdd:PLN03150  422 GLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITS-LEVLDLSYNSFNGSIPESL-------------- 486

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1002280144 511 vleggipGLPASVKVLDLSKNFLSGSLPQSLGAK 544
Cdd:PLN03150  487 -------GQLTSLRILNLNGNSLSGRVPAALGGR 513
LRRNT_2 pfam08263
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
 39-76 3.96e-05

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


Pssm-ID: 462411 [Multi-domain]  Cd Length: 41  Bit Score: 41.51  E-value: 3.96e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1002280144  39 SERDALLAFKAGLcADSAGELPSWQGH--DCCSWGSVSCN 76
Cdd:pfam08263   3 DDGQALLAFKSSL-NDPPGALSSWNSSssDPCSWTGVTCD 41
PLN03150 PLN03150
hypothetical protein; Provisional
 233-296 5.81e-05

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 47.12  E-value: 5.81e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1002280144 233 LTVLDLSNNELNSTLPRWIWSLHSLSYLDLSSCQLSGSVPDNIGNLSSLSFLQLLDNHLEGEIP 296
Cdd:PLN03150  444 LQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVP 507
LRR_8 pfam13855
Leucine rich repeat;
788-843 9.80e-05

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 40.97  E-value: 9.80e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1002280144 788 LNLSGNHILGSIPDEIGNLSHLEALDLSSNDLSGSIPPSITDLINLSVLNLSYNDL 843
Cdd:pfam13855   6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 98-268 1.52e-04

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 45.04  E-value: 1.52e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144  98 INSSLAALTHLRYLNLSGNDFGGV-----AIPDFIGSFSKLRHLDLSHAGFAGLVPPQLGNL---SMLSHLALNSSTIRM 169
Cdd:cd00116    43 LASALRPQPSLKELCLSLNETGRIprglqSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLlrsSSLQELKLNNNGLGD 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 170 DNFHWVSR-LR----ALRYLDLGR--LYLVACSDWLQAISSLPLLQVLRL--NDAFLPATSLNSVSYVNFTALTVLDLSN 240
Cdd:cd00116   123 RGLRLLAKgLKdlppALEKLVLGRnrLEGASCEALAKALRANRDLKELNLanNGIGDAGIRALAEGLKANCNLEVLDLNN 202

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1002280144 241 NELNST----LPRWIWSLHSLSYLDLSSCQLS 268
Cdd:cd00116   203 NGLTDEgasaLAETLASLKSLEVLNLGDNNLT 234
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 492-702 1.68e-04

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 44.65  E-value: 1.68e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 492 LPTSLVHMKMLSTFNMRSNVLeGGIP--------GLPASVKV--LDLSKNFLSGSLPQSLGAKYAYY----IKLSDNQLN 557
Cdd:cd00116    43 LASALRPQPSLKELCLSLNET-GRIPrglqsllqGLTKGCGLqeLDLSDNALGPDGCGVLESLLRSSslqeLKLNNNGLG 121

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 558 GTIPAYLCE-----MDSMELVDLSNNLFSGVLPDCW----KNSSRLHTIDFSNNNLHGE-IPST---MGFITSLAILSLR 624
Cdd:cd00116   122 DRGLRLLAKglkdlPPALEKLVLGRNRLEGASCEALakalRANRDLKELNLANNGIGDAgIRALaegLKANCNLEVLDLN 201

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 625 ENS--------LSGTLPSSLQscngLIILDLGSNSLSG----SLPSWLGDSLGSLITLSLRSNQFSGE----IPESLPQL 688
Cdd:cd00116   202 NNGltdegasaLAETLASLKS----LEVLNLGDNNLTDagaaALASALLSPNISLLTLSLSCNDITDDgakdLAEVLAEK 277

                         250
                  ....*....|....
gi 1002280144 689 HALQNLDLASNKLS 702
Cdd:cd00116   278 ESLLELDLRGNKFG 291
LRR_8 pfam13855
Leucine rich repeat;
331-390 2.28e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 40.20  E-value: 2.28e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 331 ELQVLKVGFNNLTGNLSGWLEHLTGLTTLDLSKNSFTGQIPEDIGKLSQLIYLDLSYNAF 390
Cdd:pfam13855   2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
LRR_8 pfam13855
Leucine rich repeat;
354-415 2.44e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 39.82  E-value: 2.44e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1002280144 354 TGLTTLDLSKNSFTGQIPEDIGKLSQLIYLDLSYNAFGgRLSEVHLGNLSRLDFLSLASNKL 415
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLT-TLSPGAFSGLPSLRYLDLSGNRL 61
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 184-416 2.56e-04

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 44.27  E-value: 2.56e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 184 LDLGRLYLVACsDWLQAISSLPLLQVLRLNDAFLPATSLNSVSYV--NFTALTVLDLSNNELNSTLPRWIWSLHS----- 256
Cdd:cd00116     3 LSLKGELLKTE-RATELLPKLLCLQVLRLEGNTLGEEAAKALASAlrPQPSLKELCLSLNETGRIPRGLQSLLQGltkgc 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 257 -LSYLDLSSCQLSgsvPDNIGNLSSLSFLQL------LDNHLEGEIPQHM-----SRLCSLNIIDMSRNNLSGNITAE-K 323
Cdd:cd00116    82 gLQELDLSDNALG---PDGCGVLESLLRSSSlqelklNNNGLGDRGLRLLakglkDLPPALEKLVLGRNRLEGASCEAlA 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 324 NLFSCMKELQVLKVGFNNLTGN----LSGWLEHLTGLTTLDLSKNSFT----GQIPEDIGKLSQLIYLDLSYNAFGGR-L 394
Cdd:cd00116   159 KALRANRDLKELNLANNGIGDAgiraLAEGLKANCNLEVLDLNNNGLTdegaSALAETLASLKSLEVLNLGDNNLTDAgA 238

                         250       260
                  ....*....|....*....|....*
gi 1002280144 395 SEVHLGNLS---RLDFLSLASNKLK 416
Cdd:cd00116   239 AALASALLSpniSLLTLSLSCNDIT 263
PLN03150 PLN03150
hypothetical protein; Provisional
 405-521 9.33e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 42.88  E-value: 9.33e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280144 405 LDFLSLASNKLKIVIePNWMPTFQ-LTGLGLHGCHVGPHIPAWLRSQTKIKMIDLGSTKITGTLPDWLWNFsSSITTLDI 483
Cdd:PLN03150  420 IDGLGLDNQGLRGFI-PNDISKLRhLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL-TSLRILNL 497

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1002280144 484 SSNSITGHLPTSL----VHMkmlSTFNMRSNVLEGGIPGLPA 521
Cdd:PLN03150  498 NGNSLSGRVPAALggrlLHR---ASFNFTDNAGLCGIPGLRA 536
LRR_8 pfam13855
Leucine rich repeat;
616-677 1.55e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 37.89  E-value: 1.55e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1002280144 616 TSLAILSLRENSLSGTLPSSLQSCNGLIILDLGSNSLSGSLPSWLgDSLGSLITLSLRSNQF 677
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAF-SGLPSLRYLDLSGNRL 61
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 776-841 4.70e-03

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 39.77  E-value: 4.70e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1002280144 776 PREIGAISF-LLALNLSGNHIlgSIPDEIGNLSHLEALDLSSNDLS--GSIPPSITDLINLSVLNLSYN 841
Cdd:cd21340   112 PRSLAALSNsLRVLNISGNNI--DSLEPLAPLRNLEQLDASNNQISdlEELLDLLSSWPSLRELDLTGN 178
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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