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Conserved domains on  [gi|1002280432|ref|XP_015644522|]
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sterol carrier protein 2 [Oryza sativa Japonica Group]

Protein Classification

SCP2 sterol-binding domain-containing protein( domain architecture ID 10488469)

SCP2 sterol-binding domain-containing protein such as human SCP2 sterol-binding domain-containing protein 1 and Candida tropicalis oleate-induced peroxisomal protein POX18

Gene Ontology:  GO:0005829
PubMed:  18084051|2364939

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SCP2 pfam02036
SCP-2 sterol transfer family; This domain is involved in binding sterols. It is found in the ...
 16-111 3.08e-17

SCP-2 sterol transfer family; This domain is involved in binding sterols. It is found in the SCP2 protein as well as the C terminus of the enzyme estradiol 17 beta-dehydrogenase EC:1.1.1.62. The UNC-24 protein contains an SPFH domain pfam01145.


:

Pssm-ID: 460423 [Multi-domain]  Cd Length: 100  Bit Score: 70.75  E-value: 3.08e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280432  16 RLHMATDAGKDIAKKV-GLVYQFNIAPKKigvdeEIFVVDLKKGEVT-KGPYEGKPDATFSFTDSDFLSIATGKMNPQIA 93
Cdd:pfam02036   3 QLLARDPAARELLKKLnGKVIRFDLTDLG-----LSLTLDLKDGGGRvLAGDEGKADVTLSASDSDLLALATGKLNPQKA 77

                          90
                  ....*....|....*...
gi 1002280432  94 FIRGAIKIKGSISAAQKF 111
Cdd:pfam02036  78 FMQGKLKIEGDMELAQKL 95
 
Name Accession Description Interval E-value
SCP2 pfam02036
SCP-2 sterol transfer family; This domain is involved in binding sterols. It is found in the ...
 16-111 3.08e-17

SCP-2 sterol transfer family; This domain is involved in binding sterols. It is found in the SCP2 protein as well as the C terminus of the enzyme estradiol 17 beta-dehydrogenase EC:1.1.1.62. The UNC-24 protein contains an SPFH domain pfam01145.


Pssm-ID: 460423 [Multi-domain]  Cd Length: 100  Bit Score: 70.75  E-value: 3.08e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280432  16 RLHMATDAGKDIAKKV-GLVYQFNIAPKKigvdeEIFVVDLKKGEVT-KGPYEGKPDATFSFTDSDFLSIATGKMNPQIA 93
Cdd:pfam02036   3 QLLARDPAARELLKKLnGKVIRFDLTDLG-----LSLTLDLKDGGGRvLAGDEGKADVTLSASDSDLLALATGKLNPQKA 77

                          90
                  ....*....|....*...
gi 1002280432  94 FIRGAIKIKGSISAAQKF 111
Cdd:pfam02036  78 FMQGKLKIEGDMELAQKL 95
SCP2 COG3255
Putative sterol carrier protein, contains SCP2 domain [Lipid transport and metabolism];
9-113 3.27e-14

Putative sterol carrier protein, contains SCP2 domain [Lipid transport and metabolism];


Pssm-ID: 442486 [Multi-domain]  Cd Length: 104  Bit Score: 63.39  E-value: 3.27e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280432   9 AQLLEQMRLHMAtdaGKDIAKKVGLVYQFNIApkkiGVDEEIFVVDLKKGEVT-KGPYEGKPDATFSFTDSDFLSIATGK 87
Cdd:COG3255     1 DEWAEALCEKLN---AADAAAGWDGVVQFVIT----GEGGGAYYLVIDDGKCTvSEGDDDDADVTLTASYEDWKKLLTGE 73

                          90       100
                  ....*....|....*....|....*.
gi 1002280432  88 MNPQIAFIRGAIKIKGSISAAQKFTP 113
Cdd:COG3255    74 LDPMTAFMTGKLKVEGDMGLAMKLMS 99
 
Name Accession Description Interval E-value
SCP2 pfam02036
SCP-2 sterol transfer family; This domain is involved in binding sterols. It is found in the ...
 16-111 3.08e-17

SCP-2 sterol transfer family; This domain is involved in binding sterols. It is found in the SCP2 protein as well as the C terminus of the enzyme estradiol 17 beta-dehydrogenase EC:1.1.1.62. The UNC-24 protein contains an SPFH domain pfam01145.


Pssm-ID: 460423 [Multi-domain]  Cd Length: 100  Bit Score: 70.75  E-value: 3.08e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280432  16 RLHMATDAGKDIAKKV-GLVYQFNIAPKKigvdeEIFVVDLKKGEVT-KGPYEGKPDATFSFTDSDFLSIATGKMNPQIA 93
Cdd:pfam02036   3 QLLARDPAARELLKKLnGKVIRFDLTDLG-----LSLTLDLKDGGGRvLAGDEGKADVTLSASDSDLLALATGKLNPQKA 77

                          90
                  ....*....|....*...
gi 1002280432  94 FIRGAIKIKGSISAAQKF 111
Cdd:pfam02036  78 FMQGKLKIEGDMELAQKL 95
SCP2 COG3255
Putative sterol carrier protein, contains SCP2 domain [Lipid transport and metabolism];
9-113 3.27e-14

Putative sterol carrier protein, contains SCP2 domain [Lipid transport and metabolism];


Pssm-ID: 442486 [Multi-domain]  Cd Length: 104  Bit Score: 63.39  E-value: 3.27e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280432   9 AQLLEQMRLHMAtdaGKDIAKKVGLVYQFNIApkkiGVDEEIFVVDLKKGEVT-KGPYEGKPDATFSFTDSDFLSIATGK 87
Cdd:COG3255     1 DEWAEALCEKLN---AADAAAGWDGVVQFVIT----GEGGGAYYLVIDDGKCTvSEGDDDDADVTLTASYEDWKKLLTGE 73

                          90       100
                  ....*....|....*....|....*.
gi 1002280432  88 MNPQIAFIRGAIKIKGSISAAQKFTP 113
Cdd:COG3255    74 LDPMTAFMTGKLKVEGDMGLAMKLMS 99
BDS1 COG2015
Alkyl sulfatase BDS1 and related hydrolases, metallo-beta-lactamase superfamily [Secondary ...
 9-111 8.09e-06

Alkyl sulfatase BDS1 and related hydrolases, metallo-beta-lactamase superfamily [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 441618 [Multi-domain]  Cd Length: 629  Bit Score: 43.29  E-value: 8.09e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002280432   9 AQLLEQMRLHMatDAGKdiAKKVGLVYQFNIAPKKigvdeEIFVVDLKKG--EVTKGPYEGKPDATFSFTDSDFLSIATG 86
Cdd:COG2015   520 EMLFDYLAVRL--DGPK--AAGKDLTINLIFTDTG-----EKYLLELRNGvlTYRKGPQADDADATLTLTRADLLALLLG 590

                          90       100
                  ....*....|....*....|....*
gi 1002280432  87 KMNPQIAFIRGAIKIKGSISAAQKF 111
Cdd:COG2015   591 KTTLDDLVASGGAKVEGDAAALARL 615
Alkyl_sulf_C pfam14864
Alkyl sulfatase C-terminal; This domain is found at the C-terminus of alkyl sulfatases. ...
 48-112 8.12e-04

Alkyl sulfatase C-terminal; This domain is found at the C-terminus of alkyl sulfatases. Together with the N-terminal catalytic domain, this domain forms a hydrophobic chute and may recruit hydrophobic substrates.


Pssm-ID: 405542 [Multi-domain]  Cd Length: 124  Bit Score: 36.40  E-value: 8.12e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1002280432  48 EEIFVVDLKKGEVT--KGPYEGKPDATFSFTDSDFLSIATGKMNPQIAFIRGAIKIKGSISAAQKFT 112
Cdd:pfam14864  43 DEQYRLTLSNGVLTyrKGRQADDADATLTLTRADLLALLLGKATLGKLIAAGKIKVEGDPSALAELL 109
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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