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Conserved domains on  [gi|1002230293|ref|XP_015648269|]
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probable starch synthase 4, chloroplastic/amyloplastic isoform X1 [Oryza sativa Japonica Group]

Protein Classification

glycogen synthase( domain architecture ID 11477301)

glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, a key step of glycogen biosynthesis

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PLN02939 PLN02939
transferase, transferring glycosyl groups
10-975 0e+00

transferase, transferring glycosyl groups


:

Pssm-ID: 215507 [Multi-domain]  Cd Length: 977  Bit Score: 1823.74  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293  10 EYSALLSLSCGPI---------TRRRFAVSCRARPPgNLSAQQKKKRGKNIAPKQRSSNAKLLLTTEENGQLPSTSLRTS 80
Cdd:PLN02939    5 ESAALLSHGCGPIrsrapfylpSRRRLAVSCRARRR-GFSSQQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENTSLRTV 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293  81 MERPQKSTSSEDDTNGAISQIDEKIAAIGNEQQERSKDKHFESDFQLEDFGEMIQNMEKNILLLNQARLQAIEDVDKILT 160
Cdd:PLN02939   84 MELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILT 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 161 EKEALQKKVDTLEMNLSKA-----LATKGNINTDIPGDHLEKFTKEILIESALSGGnpahlCESPLFMELTVLKEENMLL 235
Cdd:PLN02939  164 EKEALQGKINILEMRLSETdarikLAAQEKIHVEILEEQLEKLRNELLIRGATEGL-----CVHSLSKELDVLKEENMLL 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 236 KADAQFLKAKIVEFAETEEFLFKLEKERSLLDATVRELEARFLVAQTDIWKVVPLQYDVWMEKVENLQHMLGCLKNHVEK 315
Cdd:PLN02939  239 KDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRATNQVEK 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 316 YAALLDQHDDLHDKIDELEASLKEGKTSEFSPYVVELLQQKLKAAKSHHQAGHQETNTHIQVYQQLTEEFQDNLGKLIEE 395
Cdd:PLN02939  319 AALVLDQNQDLRDKVDKLEASLKEANVSKFSSYKVELLQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEE 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 396 SGR--LEHSANSMPSEFWSHILLMIDGWFLERKIPNTDARMLREMAWKRDDRICEAYFACKGAKESDVMETFLKLSLSGN 473
Cdd:PLN02939  399 SKKrsLEHPADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKNEREAVENFLKLTLSGT 478
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 474 SqcsSGLHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFSNN 553
Cdd:PLN02939  479 S---SGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNK 555
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 554 VWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATR 633
Cdd:PLN02939  556 IWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPK 635
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 634 GFSSARICFTCHNFEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHGRINVAKGGIVYSNIVTTVSPTYALEVRSEGGRG 713
Cdd:PLN02939  636 GFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRG 715
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 714 LQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDASQPLVACITRLVPQKGLH 793
Cdd:PLN02939  716 LQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVH 795
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 794 LIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMI 873
Cdd:PLN02939  796 LIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMI 875
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 874 AMRYGSVPIVRQTGGLCDSVFDFDDETIPVELRNGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWDS 953
Cdd:PLN02939  876 AMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDS 955
                         970       980
                  ....*....|....*....|..
gi 1002230293 954 PASQYENLYQSAVAQARGAAQT 975
Cdd:PLN02939  956 SASQYEELYQRAVARARAAANR 977
 
Name Accession Description Interval E-value
PLN02939 PLN02939
transferase, transferring glycosyl groups
10-975 0e+00

transferase, transferring glycosyl groups


Pssm-ID: 215507 [Multi-domain]  Cd Length: 977  Bit Score: 1823.74  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293  10 EYSALLSLSCGPI---------TRRRFAVSCRARPPgNLSAQQKKKRGKNIAPKQRSSNAKLLLTTEENGQLPSTSLRTS 80
Cdd:PLN02939    5 ESAALLSHGCGPIrsrapfylpSRRRLAVSCRARRR-GFSSQQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENTSLRTV 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293  81 MERPQKSTSSEDDTNGAISQIDEKIAAIGNEQQERSKDKHFESDFQLEDFGEMIQNMEKNILLLNQARLQAIEDVDKILT 160
Cdd:PLN02939   84 MELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILT 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 161 EKEALQKKVDTLEMNLSKA-----LATKGNINTDIPGDHLEKFTKEILIESALSGGnpahlCESPLFMELTVLKEENMLL 235
Cdd:PLN02939  164 EKEALQGKINILEMRLSETdarikLAAQEKIHVEILEEQLEKLRNELLIRGATEGL-----CVHSLSKELDVLKEENMLL 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 236 KADAQFLKAKIVEFAETEEFLFKLEKERSLLDATVRELEARFLVAQTDIWKVVPLQYDVWMEKVENLQHMLGCLKNHVEK 315
Cdd:PLN02939  239 KDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRATNQVEK 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 316 YAALLDQHDDLHDKIDELEASLKEGKTSEFSPYVVELLQQKLKAAKSHHQAGHQETNTHIQVYQQLTEEFQDNLGKLIEE 395
Cdd:PLN02939  319 AALVLDQNQDLRDKVDKLEASLKEANVSKFSSYKVELLQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEE 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 396 SGR--LEHSANSMPSEFWSHILLMIDGWFLERKIPNTDARMLREMAWKRDDRICEAYFACKGAKESDVMETFLKLSLSGN 473
Cdd:PLN02939  399 SKKrsLEHPADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKNEREAVENFLKLTLSGT 478
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 474 SqcsSGLHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFSNN 553
Cdd:PLN02939  479 S---SGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNK 555
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 554 VWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATR 633
Cdd:PLN02939  556 IWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPK 635
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 634 GFSSARICFTCHNFEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHGRINVAKGGIVYSNIVTTVSPTYALEVRSEGGRG 713
Cdd:PLN02939  636 GFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRG 715
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 714 LQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDASQPLVACITRLVPQKGLH 793
Cdd:PLN02939  716 LQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVH 795
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 794 LIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMI 873
Cdd:PLN02939  796 LIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMI 875
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 874 AMRYGSVPIVRQTGGLCDSVFDFDDETIPVELRNGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWDS 953
Cdd:PLN02939  876 AMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDS 955
                         970       980
                  ....*....|....*....|..
gi 1002230293 954 PASQYENLYQSAVAQARGAAQT 975
Cdd:PLN02939  956 SASQYEELYQRAVARARAAANR 977
glgA TIGR02095
glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) ...
480-965 0e+00

glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 273969 [Multi-domain]  Cd Length: 473  Bit Score: 605.80  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 480 LHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFsNNVWTGTV 559
Cdd:TIGR02095   1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLY-VKVFEGVV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 560 EGLPVYFIEPQHpskFFWR-AQYYGE--HDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYatrGFS 636
Cdd:TIGR02095  80 EGVPVYFIDNPS---LFDRpGGIYGDdyPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVY---RPN 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 637 SARICFTCHNFEYQGTAPAPDLSYCGLDveqldrPDRMQDNA---HGRINVAKGGIVYSNIVTTVSPTYALEVR-SEGGR 712
Cdd:TIGR02095 154 PIKTVFTIHNLAYQGVFPADDFSELGLP------PEYFHMEGlefYGRVNFLKGGIVYADRVTTVSPTYAREILtPEFGY 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 713 GLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLySEDASQPLVACITRLVPQKGL 792
Cdd:TIGR02095 228 GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGL-PVDDDVPLFGVISRLTQQKGV 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 793 HLIRHAIYKTAELGGQFVLLGSSPvPHIQREFEGVAdqFQKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQM 872
Cdd:TIGR02095 307 DLLLAALPELLELGGQLVVLGTGD-PELEEALRELA--ERYPGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQL 383
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 873 IAMRYGSVPIVRQTGGLCDSVFDFDDETipvELRNGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWD 952
Cdd:TIGR02095 384 YAMRYGTVPIVRRTGGLADTVVDGDPEA---ESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAMSQDFSWD 460
                         490
                  ....*....|...
gi 1002230293 953 SPASQYENLYQSA 965
Cdd:TIGR02095 461 KSAKQYVELYRSL 473
GT5_Glycogen_synthase_DULL1-like cd03791
Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 ...
481-964 0e+00

Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.


Pssm-ID: 340822 [Multi-domain]  Cd Length: 474  Bit Score: 597.62  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 481 HIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIqsYFDGNLFSNNVWTGTVE 560
Cdd:cd03791     1 KVLFVTSEVAPFAKTGGLGDVAGALPKALAKLGHDVRVILPRYGQIPDELDGYLRVLGLEV--KVGGRGEEVGVFELPVD 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 561 GLPVYFIEPQHPSKFFWR--AQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFSSA 638
Cdd:cd03791    79 GVDYYFLDNPEFFDRPGLpgPPGYDYPDNAERFAFFSRAALELLRRLGFQPDIIHANDWHTALVPAYLKTRYRGPGFKKI 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 639 RICFTCHNFEYQGTAPAPDLSYCGLDvEQLDRPDRMQDnaHGRINVAKGGIVYSNIVTTVSPTYALEV-RSEGGRGLQDT 717
Cdd:cd03791   159 KTVFTIHNLAYQGLFPLDTLAELGLP-PELFHIDGLEF--YGQINFLKAGIVYADRVTTVSPTYAKEIlTPEYGEGLDGV 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 718 LKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLySEDASQPLVACITRLVPQKGLHLIRH 797
Cdd:cd03791   236 LRARAGKLSGILNGIDYDEWNPATDKLIPANYSANDLEGKAENKAALQKELGL-PVDPDAPLFGFVGRLTEQKGVDLILD 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 798 AIYKTAELGGQFVLLGSSPVPHIQREFEgVADQFqkNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMRY 877
Cdd:cd03791   315 ALPELLEEGGQLVVLGSGDPEYEQAFRE-LAERY--PGKVAVVIGFDEALAHRIYAGADFFLMPSRFEPCGLVQMYAMRY 391
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 878 GSVPIVRQTGGLCDSVFDFDDETipvELRNGFTFARTDEQDLSSCLERAFSYYsRKPMVWKQLVQKDMQIDFSWDSPASQ 957
Cdd:cd03791   392 GTLPIVRRTGGLADTVFDYDPET---GEGTGFVFEDYDAEALLAALRRALALY-RNPELWRKLQKNAMKQDFSWDKSAKE 467

                  ....*..
gi 1002230293 958 YENLYQS 964
Cdd:cd03791   468 YLELYRS 474
GlgA COG0297
Glycogen synthase [Carbohydrate transport and metabolism];
480-965 0e+00

Glycogen synthase [Carbohydrate transport and metabolism];


Pssm-ID: 440066 [Multi-domain]  Cd Length: 476  Bit Score: 596.30  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 480 LHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMqLDQITNLKVLDVvIQSYFDGNLFSNNVWTGTV 559
Cdd:COG0297     1 MKILFVASEAAPFAKTGGLADVVGALPKALAKLGHDVRVVLPGYPSI-DDKLKDLEVVAS-LEVPLGGRTYYARVLEGPD 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 560 EGLPVYFIEpqHPSkFFWRAQYYGE-----HDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRG 634
Cdd:COG0297    79 DGVPVYFID--NPE-LFDRPGPYGDpdrdyPDNAERFAFFSRAALELLKGLDWKPDIIHCHDWQTGLIPALLKTRYADDP 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 635 FSSARICFTCHNFEYQGTAPAPDLSYCGLDvEQLDRPDRMQDnaHGRINVAKGGIVYSNIVTTVSPTYALEVRS-EGGRG 713
Cdd:COG0297   156 FKRIKTVFTIHNLAYQGIFPAEILELLGLP-PELFTPDGLEF--YGQINFLKAGIVYADRVTTVSPTYAREIQTpEFGEG 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 714 LQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLySEDASQPLVACITRLVPQKGLH 793
Cdd:COG0297   233 LDGLLRARSGKLSGILNGIDYDVWNPATDPYLPANYSADDLEGKAANKAALQEELGL-PVDPDAPLIGMVSRLTEQKGLD 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 794 LIRHAIYKTAELGGQFVLLGSSPvPHIQREFEGVADQFqkNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMI 873
Cdd:COG0297   312 LLLEALDELLEEDVQLVVLGSGD-PEYEEAFRELAARY--PGRVAVYIGYDEALAHRIYAGADFFLMPSRFEPCGLNQMY 388
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 874 AMRYGSVPIVRQTGGLCDSVFDFDDETipvELRNGFTFARTDEQDLSSCLERAFSYYsRKPMVWKQLVQKDMQIDFSWDS 953
Cdd:COG0297   389 ALRYGTVPIVRRTGGLADTVIDYNEAT---GEGTGFVFDEYTAEALLAAIRRALALY-RDPEAWRKLQRNAMKQDFSWEK 464
                         490
                  ....*....|..
gi 1002230293 954 PASQYENLYQSA 965
Cdd:COG0297   465 SAKEYLELYREL 476
Glyco_transf_5 pfam08323
Starch synthase catalytic domain;
482-719 1.79e-77

Starch synthase catalytic domain;


Pssm-ID: 400563 [Multi-domain]  Cd Length: 239  Bit Score: 253.02  E-value: 1.79e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 482 IVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFSNNVWTGTVEG 561
Cdd:pfam08323   1 ILFVASEVAPFAKTGGLADVVGALPKALAALGHDVRVIMPRYGNIPEERNQLEDVIRLSVAAGVPVRPLTVGVARLELDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 562 LPVYFIEPQHpskFFWRAQYYGE-----HDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFS 636
Cdd:pfam08323  81 VDVYFLDNPD---YFDRPGLYGDdgrdyEDNAERFAFFSRAALELAKKLGWIPDIIHCHDWHTALVPAYLKEAYADDPFK 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 637 SARICFTCHNFEYQGTAPAPDLSYCGLDVEQLDrPDRMQDnaHGRINVAKGGIVYSNIVTTVSPTYALEVRS-EGGRGLQ 715
Cdd:pfam08323 158 NIKTVFTIHNLAYQGRFPADLLDLLGLPPEDFN-LDGLEF--YGQINFLKAGIVYADAVTTVSPTYAEEIQTpEFGGGLD 234

                  ....
gi 1002230293 716 DTLK 719
Cdd:pfam08323 235 GLLR 238
 
Name Accession Description Interval E-value
PLN02939 PLN02939
transferase, transferring glycosyl groups
10-975 0e+00

transferase, transferring glycosyl groups


Pssm-ID: 215507 [Multi-domain]  Cd Length: 977  Bit Score: 1823.74  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293  10 EYSALLSLSCGPI---------TRRRFAVSCRARPPgNLSAQQKKKRGKNIAPKQRSSNAKLLLTTEENGQLPSTSLRTS 80
Cdd:PLN02939    5 ESAALLSHGCGPIrsrapfylpSRRRLAVSCRARRR-GFSSQQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENTSLRTV 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293  81 MERPQKSTSSEDDTNGAISQIDEKIAAIGNEQQERSKDKHFESDFQLEDFGEMIQNMEKNILLLNQARLQAIEDVDKILT 160
Cdd:PLN02939   84 MELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILT 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 161 EKEALQKKVDTLEMNLSKA-----LATKGNINTDIPGDHLEKFTKEILIESALSGGnpahlCESPLFMELTVLKEENMLL 235
Cdd:PLN02939  164 EKEALQGKINILEMRLSETdarikLAAQEKIHVEILEEQLEKLRNELLIRGATEGL-----CVHSLSKELDVLKEENMLL 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 236 KADAQFLKAKIVEFAETEEFLFKLEKERSLLDATVRELEARFLVAQTDIWKVVPLQYDVWMEKVENLQHMLGCLKNHVEK 315
Cdd:PLN02939  239 KDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRATNQVEK 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 316 YAALLDQHDDLHDKIDELEASLKEGKTSEFSPYVVELLQQKLKAAKSHHQAGHQETNTHIQVYQQLTEEFQDNLGKLIEE 395
Cdd:PLN02939  319 AALVLDQNQDLRDKVDKLEASLKEANVSKFSSYKVELLQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEE 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 396 SGR--LEHSANSMPSEFWSHILLMIDGWFLERKIPNTDARMLREMAWKRDDRICEAYFACKGAKESDVMETFLKLSLSGN 473
Cdd:PLN02939  399 SKKrsLEHPADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKNEREAVENFLKLTLSGT 478
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 474 SqcsSGLHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFSNN 553
Cdd:PLN02939  479 S---SGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNK 555
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 554 VWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATR 633
Cdd:PLN02939  556 IWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPK 635
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 634 GFSSARICFTCHNFEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHGRINVAKGGIVYSNIVTTVSPTYALEVRSEGGRG 713
Cdd:PLN02939  636 GFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRG 715
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 714 LQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDASQPLVACITRLVPQKGLH 793
Cdd:PLN02939  716 LQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVH 795
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 794 LIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMI 873
Cdd:PLN02939  796 LIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMI 875
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 874 AMRYGSVPIVRQTGGLCDSVFDFDDETIPVELRNGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWDS 953
Cdd:PLN02939  876 AMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDS 955
                         970       980
                  ....*....|....*....|..
gi 1002230293 954 PASQYENLYQSAVAQARGAAQT 975
Cdd:PLN02939  956 SASQYEELYQRAVARARAAANR 977
glgA TIGR02095
glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) ...
480-965 0e+00

glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 273969 [Multi-domain]  Cd Length: 473  Bit Score: 605.80  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 480 LHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFsNNVWTGTV 559
Cdd:TIGR02095   1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLY-VKVFEGVV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 560 EGLPVYFIEPQHpskFFWR-AQYYGE--HDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYatrGFS 636
Cdd:TIGR02095  80 EGVPVYFIDNPS---LFDRpGGIYGDdyPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVY---RPN 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 637 SARICFTCHNFEYQGTAPAPDLSYCGLDveqldrPDRMQDNA---HGRINVAKGGIVYSNIVTTVSPTYALEVR-SEGGR 712
Cdd:TIGR02095 154 PIKTVFTIHNLAYQGVFPADDFSELGLP------PEYFHMEGlefYGRVNFLKGGIVYADRVTTVSPTYAREILtPEFGY 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 713 GLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLySEDASQPLVACITRLVPQKGL 792
Cdd:TIGR02095 228 GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGL-PVDDDVPLFGVISRLTQQKGV 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 793 HLIRHAIYKTAELGGQFVLLGSSPvPHIQREFEGVAdqFQKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQM 872
Cdd:TIGR02095 307 DLLLAALPELLELGGQLVVLGTGD-PELEEALRELA--ERYPGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQL 383
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 873 IAMRYGSVPIVRQTGGLCDSVFDFDDETipvELRNGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWD 952
Cdd:TIGR02095 384 YAMRYGTVPIVRRTGGLADTVVDGDPEA---ESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAMSQDFSWD 460
                         490
                  ....*....|...
gi 1002230293 953 SPASQYENLYQSA 965
Cdd:TIGR02095 461 KSAKQYVELYRSL 473
GT5_Glycogen_synthase_DULL1-like cd03791
Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 ...
481-964 0e+00

Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.


Pssm-ID: 340822 [Multi-domain]  Cd Length: 474  Bit Score: 597.62  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 481 HIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIqsYFDGNLFSNNVWTGTVE 560
Cdd:cd03791     1 KVLFVTSEVAPFAKTGGLGDVAGALPKALAKLGHDVRVILPRYGQIPDELDGYLRVLGLEV--KVGGRGEEVGVFELPVD 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 561 GLPVYFIEPQHPSKFFWR--AQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFSSA 638
Cdd:cd03791    79 GVDYYFLDNPEFFDRPGLpgPPGYDYPDNAERFAFFSRAALELLRRLGFQPDIIHANDWHTALVPAYLKTRYRGPGFKKI 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 639 RICFTCHNFEYQGTAPAPDLSYCGLDvEQLDRPDRMQDnaHGRINVAKGGIVYSNIVTTVSPTYALEV-RSEGGRGLQDT 717
Cdd:cd03791   159 KTVFTIHNLAYQGLFPLDTLAELGLP-PELFHIDGLEF--YGQINFLKAGIVYADRVTTVSPTYAKEIlTPEYGEGLDGV 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 718 LKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLySEDASQPLVACITRLVPQKGLHLIRH 797
Cdd:cd03791   236 LRARAGKLSGILNGIDYDEWNPATDKLIPANYSANDLEGKAENKAALQKELGL-PVDPDAPLFGFVGRLTEQKGVDLILD 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 798 AIYKTAELGGQFVLLGSSPVPHIQREFEgVADQFqkNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMRY 877
Cdd:cd03791   315 ALPELLEEGGQLVVLGSGDPEYEQAFRE-LAERY--PGKVAVVIGFDEALAHRIYAGADFFLMPSRFEPCGLVQMYAMRY 391
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 878 GSVPIVRQTGGLCDSVFDFDDETipvELRNGFTFARTDEQDLSSCLERAFSYYsRKPMVWKQLVQKDMQIDFSWDSPASQ 957
Cdd:cd03791   392 GTLPIVRRTGGLADTVFDYDPET---GEGTGFVFEDYDAEALLAALRRALALY-RNPELWRKLQKNAMKQDFSWDKSAKE 467

                  ....*..
gi 1002230293 958 YENLYQS 964
Cdd:cd03791   468 YLELYRS 474
GlgA COG0297
Glycogen synthase [Carbohydrate transport and metabolism];
480-965 0e+00

Glycogen synthase [Carbohydrate transport and metabolism];


Pssm-ID: 440066 [Multi-domain]  Cd Length: 476  Bit Score: 596.30  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 480 LHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMqLDQITNLKVLDVvIQSYFDGNLFSNNVWTGTV 559
Cdd:COG0297     1 MKILFVASEAAPFAKTGGLADVVGALPKALAKLGHDVRVVLPGYPSI-DDKLKDLEVVAS-LEVPLGGRTYYARVLEGPD 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 560 EGLPVYFIEpqHPSkFFWRAQYYGE-----HDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRG 634
Cdd:COG0297    79 DGVPVYFID--NPE-LFDRPGPYGDpdrdyPDNAERFAFFSRAALELLKGLDWKPDIIHCHDWQTGLIPALLKTRYADDP 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 635 FSSARICFTCHNFEYQGTAPAPDLSYCGLDvEQLDRPDRMQDnaHGRINVAKGGIVYSNIVTTVSPTYALEVRS-EGGRG 713
Cdd:COG0297   156 FKRIKTVFTIHNLAYQGIFPAEILELLGLP-PELFTPDGLEF--YGQINFLKAGIVYADRVTTVSPTYAREIQTpEFGEG 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 714 LQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLySEDASQPLVACITRLVPQKGLH 793
Cdd:COG0297   233 LDGLLRARSGKLSGILNGIDYDVWNPATDPYLPANYSADDLEGKAANKAALQEELGL-PVDPDAPLIGMVSRLTEQKGLD 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 794 LIRHAIYKTAELGGQFVLLGSSPvPHIQREFEGVADQFqkNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMI 873
Cdd:COG0297   312 LLLEALDELLEEDVQLVVLGSGD-PEYEEAFRELAARY--PGRVAVYIGYDEALAHRIYAGADFFLMPSRFEPCGLNQMY 388
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 874 AMRYGSVPIVRQTGGLCDSVFDFDDETipvELRNGFTFARTDEQDLSSCLERAFSYYsRKPMVWKQLVQKDMQIDFSWDS 953
Cdd:COG0297   389 ALRYGTVPIVRRTGGLADTVIDYNEAT---GEGTGFVFDEYTAEALLAAIRRALALY-RDPEAWRKLQRNAMKQDFSWEK 464
                         490
                  ....*....|..
gi 1002230293 954 PASQYENLYQSA 965
Cdd:COG0297   465 SAKEYLELYREL 476
glgA PRK00654
glycogen synthase GlgA;
480-968 0e+00

glycogen synthase GlgA;


Pssm-ID: 234809 [Multi-domain]  Cd Length: 466  Bit Score: 594.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 480 LHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMqLDQITNLKVldvviqsyfDGNLFSNNVWTGTV 559
Cdd:PRK00654    1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAI-REKLRDAQV---------VGRLDLFTVLFGHL 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 560 E--GLPVYFIEPQHpskFFWRAQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYAtRGFSS 637
Cdd:PRK00654   71 EgdGVPVYLIDAPH---LFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYW-RGYPD 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 638 ARICFTCHNFEYQGTAPAPDLSYCGLDVEQLdRPDRMQDnaHGRINVAKGGIVYSNIVTTVSPTYALEVR-SEGGRGLQD 716
Cdd:PRK00654  147 IKTVFTIHNLAYQGLFPAEILGELGLPAEAF-HLEGLEF--YGQISFLKAGLYYADRVTTVSPTYAREITtPEFGYGLEG 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 717 TLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDAsqPLVACITRLVPQKGLHLIR 796
Cdd:PRK00654  224 LLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDA--PLFAMVSRLTEQKGLDLVL 301
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 797 HAIYKTAELGGQFVLLGSsPVPHIQREFEGVADQFqkNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMR 876
Cdd:PRK00654  302 EALPELLEQGGQLVLLGT-GDPELEEAFRALAARY--PGKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALR 378
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 877 YGSVPIVRQTGGLCDSVFDFDDETipvELRNGFTFARTDEQDLSSCLERAFSYYSRKPmVWKQLVQKDMQIDFSWDSPAS 956
Cdd:PRK00654  379 YGTLPIVRRTGGLADTVIDYNPED---GEATGFVFDDFNAEDLLRALRRALELYRQPP-LWRALQRQAMAQDFSWDKSAE 454
                         490
                  ....*....|..
gi 1002230293 957 QYENLYQSAVAQ 968
Cdd:PRK00654  455 EYLELYRRLLGK 466
PLN02316 PLN02316
synthase/transferase
480-965 3.16e-148

synthase/transferase


Pssm-ID: 215180 [Multi-domain]  Cd Length: 1036  Bit Score: 466.65  E-value: 3.16e-148
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293  480 LHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLdvviQSYFDGNLfSNNVWTGTV 559
Cdd:PLN02316   588 MHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQ----RSYSWGGT-EIKVWFGKV 662
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293  560 EGLPVYFIEPQhpSKFFWRAQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFSSAR 639
Cdd:PLN02316   663 EGLSVYFLEPQ--NGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKAR 740
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293  640 ICFTCHNFEYqgtapapdlsycgldveqldrpdrmqdnahGRINVAKGgIVYSNIVTTVSPTYALEVRSEGgrglqdTLK 719
Cdd:PLN02316   741 VVFTIHNLEF------------------------------GANHIGKA-MAYADKATTVSPTYSREVSGNS------AIA 783
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293  720 MHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATD-LQGKAANKAFLRKQLGLYSEDAsqPLVACITRLVPQKGLHLIRHA 798
Cdd:PLN02316   784 PHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENvVEGKRAAKEALQQRLGLKQADL--PLVGIITRLTHQKGIHLIKHA 861
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293  799 IYKTAELGGQFVLLGSSPVPHIQREFEGVADQFQKNNN--IRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMR 876
Cdd:PLN02316   862 IWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHdrARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMR 941
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293  877 YGSVPIVRQTGGLCDSVFDFDDETIPVELR----NGFTFARTDEQDLSSCLERAFS--YYSRKpmvW-KQLVQKDMQIDF 949
Cdd:PLN02316   942 YGSIPVVRKTGGLFDTVFDVDHDKERAQAQglepNGFSFDGADAAGVDYALNRAISawYDGRD---WfNSLCKRVMEQDW 1018
                          490
                   ....*....|....*.
gi 1002230293  950 SWDSPASQYENLYQSA 965
Cdd:PLN02316  1019 SWNRPALDYMELYHSA 1034
PRK14099 PRK14099
glycogen synthase GlgA;
478-970 2.47e-86

glycogen synthase GlgA;


Pssm-ID: 237610 [Multi-domain]  Cd Length: 485  Bit Score: 285.84  E-value: 2.47e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 478 SGLHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCM--QLDQITNLKVLDvviqSYFDGNlfsNNVW 555
Cdd:PRK14099    2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVlaGIEDAEQVHSFP----DLFGGP---ARLL 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 556 TGTVEGLPVYFIEPQHpskFFWRA--QYYGEH-----DDFKRYSYFSRAALELLYQS--GKKIDIIHCHDWQTAFV-APL 625
Cdd:PRK14099   75 AARAGGLDLFVLDAPH---LYDRPgnPYVGPDgkdwpDNAQRFAALARAAAAIGQGLvpGFVPDIVHAHDWQAGLApAYL 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 626 YWDiyatrGFSSARICFTCHNFEYQGTAPAPDLSYCGL-----DVEQLDRpdrmqdnaHGRINVAKGGIVYSNIVTTVSP 700
Cdd:PRK14099  152 HYS-----GRPAPGTVFTIHNLAFQGQFPRELLGALGLppsafSLDGVEY--------YGGIGYLKAGLQLADRITTVSP 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 701 TYALEVRS-EGGRGLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDASqPL 779
Cdd:PRK14099  219 TYALEIQGpEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDA-LL 297
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 780 VACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPvPHIQREFEGVAdqfQKN-NNIRLILKYDEALSHCIYAASDMF 858
Cdd:PRK14099  298 LGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGD-AELEARFRAAA---QAYpGQIGVVIGYDEALAHLIQAGADAL 373
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 859 IIPSMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFDFDDETIPVELRNGFTFARTDEQDLSSCLERAFSYYSrKPMVWK 938
Cdd:PRK14099  374 LVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFA-DPVAWR 452
                         490       500       510
                  ....*....|....*....|....*....|..
gi 1002230293 939 QLVQKDMQIDFSWDSPASQYENLYQSAVAQAR 970
Cdd:PRK14099  453 RLQRNGMTTDVSWRNPAQHYAALYRSLVAERR 484
Glyco_transf_5 pfam08323
Starch synthase catalytic domain;
482-719 1.79e-77

Starch synthase catalytic domain;


Pssm-ID: 400563 [Multi-domain]  Cd Length: 239  Bit Score: 253.02  E-value: 1.79e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 482 IVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFSNNVWTGTVEG 561
Cdd:pfam08323   1 ILFVASEVAPFAKTGGLADVVGALPKALAALGHDVRVIMPRYGNIPEERNQLEDVIRLSVAAGVPVRPLTVGVARLELDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 562 LPVYFIEPQHpskFFWRAQYYGE-----HDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFS 636
Cdd:pfam08323  81 VDVYFLDNPD---YFDRPGLYGDdgrdyEDNAERFAFFSRAALELAKKLGWIPDIIHCHDWHTALVPAYLKEAYADDPFK 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 637 SARICFTCHNFEYQGTAPAPDLSYCGLDVEQLDrPDRMQDnaHGRINVAKGGIVYSNIVTTVSPTYALEVRS-EGGRGLQ 715
Cdd:pfam08323 158 NIKTVFTIHNLAYQGRFPADLLDLLGLPPEDFN-LDGLEF--YGQINFLKAGIVYADAVTTVSPTYAEEIQTpEFGGGLD 234

                  ....
gi 1002230293 716 DTLK 719
Cdd:pfam08323 235 GLLR 238
PRK14098 PRK14098
starch synthase;
482-963 3.80e-68

starch synthase;


Pssm-ID: 172588 [Multi-domain]  Cd Length: 489  Bit Score: 236.17  E-value: 3.80e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 482 IVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKY-----------DCMQLDQI-TNLK----VLDVV----- 540
Cdd:PRK14098    8 VLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYgtindrkfrlhDVLRLSDIeVPLKektdLLHVKvtalp 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 541 ---IQSYFDGN--LFSNNVWtgtveglpvyFIEPQHpskffwraqyygeHDDFK----RYSYFSRAALELLYQSGKKIDI 611
Cdd:PRK14098   88 sskIQTYFLYNekYFKRNGL----------FTDMSL-------------GGDLKgsaeKVIFFNVGVLETLQRLGWKPDI 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 612 IHCHDWQTAFVAPLYWDIYATRGF-SSARICFTCHNFEYQGTAPapdlsycgLDVEQLDRPDRMQDNAH---GRINVAKG 687
Cdd:PRK14098  145 IHCHDWYAGLVPLLLKTVYADHEFfKDIKTVLTIHNVYRQGVLP--------FKVFQKLLPEEVCSGLHregDEVNMLYT 216
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 688 GIVYSNIVTTVSPTYALEVRSEGGR--GLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLR 765
Cdd:PRK14098  217 GVEHADLLTTTSPRYAEEIAGDGEEafGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALL 296
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 766 KQLGLySEDASQPLVACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSpvphiQREFEGVADQFQKNNNIRLILKYD- 844
Cdd:PRK14098  297 EEVGL-PFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSG-----DKEYEKRFQDFAEEHPEQVSVQTEf 370
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 845 -EALSHCIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFDFDDetipvELRNGFTFARTDEQDLSSCL 923
Cdd:PRK14098  371 tDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSE-----DKGSGFIFHDYTPEALVAKL 445
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|
gi 1002230293 924 ERAFSYYSRKPMvWKQLVQKDMQIDFSWDSPASQYENLYQ 963
Cdd:PRK14098  446 GEALALYHDEER-WEELVLEAMERDFSWKNSAEEYAQLYR 484
GT4_PimA-like cd03801
phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 ...
481-963 1.83e-17

phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.


Pssm-ID: 340831 [Multi-domain]  Cd Length: 366  Bit Score: 85.28  E-value: 1.83e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 481 HIVHIAAEMAPVakVGGLADVVAGLGKALQTKGHLVEIVLPkydcmqldqitnlkvldvviqsyfdgnlfsnnvwtGTVE 560
Cdd:cd03801     1 KILLLSPELPPP--VGGAERHVRELARALAARGHDVTVLTP-----------------------------------ADPG 43
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 561 GLPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAAlellyqsgkKIDIIHCHDWQTAFVAPLYWdiyatrGFSSARI 640
Cdd:cd03801    44 EPPEELEDGVIVPLLPSLAALLRARRLLRELRPLLRLR---------KFDVVHAHGLLAALLAALLA------LLLGAPL 108
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 641 CFTCHNFEYQGTAPAPDLSYcgldvEQLDRPDRMQDNAHGRInvakggivysnivtTVSPTYALEVRSEGGRglqdtlkm 720
Cdd:cd03801   109 VVTLHGAEPGRLLLLLAAER-----RLLARAEALLRRADAVI--------------AVSEALRDELRALGGI-------- 161
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 721 HSRKFVGILNGIDTGTWNPstdrflavqysatdlqgkaankaFLRKQLGLyseDASQPLVACITRLVPQKGLHLIRHAIY 800
Cdd:cd03801   162 PPEKIVVIPNGVDLERFSP-----------------------PLRRKLGI---PPDRPVLLFVGRLSPRKGVDLLLEALA 215
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 801 KTAELGG--QFVLLGSSP--VPHIQREFEGVADqfqknnNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMR 876
Cdd:cd03801   216 KLLRRGPdvRLVIVGGDGplRAELEELELGLGD------RVRFLGFVPDEELPALYAAADVFVLPSRYEGFGLVVLEAMA 289
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 877 YGSVPIVRQTGGLCDSVfdfDDETipvelrNGFTFARTDEQDLSSCLERAFSYysrkPMVWKQLVQ---KDMQIDFSWDS 953
Cdd:cd03801   290 AGLPVVATDVGGLPEVV---EDGE------GGLVVPPDDVEALADALLRLLAD----PELRARLGRaarERVAERFSWER 356
                         490
                  ....*....|
gi 1002230293 954 PASQYENLYQ 963
Cdd:cd03801   357 VAERLLDLYR 366
RfaB COG0438
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
831-967 5.59e-10

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440207 [Multi-domain]  Cd Length: 123  Bit Score: 58.08  E-value: 5.59e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 831 FQKNNNIRLILkydEALshciYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFDFDdetipvelrNGFT 910
Cdd:COG0438     4 LVPRKGLDLLL---EAL----LAAADVFVLPSRSEGFGLVLLEAMAAGLPVIATDVGGLPEVIEDGE---------TGLL 67
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 911 FARTDEQDLSSCLERAFSYYSRkpmvWKQLVQ---KDMQIDFSWDSPASQYENLYQSAVA 967
Cdd:COG0438    68 VPPGDPEALAEAILRLLEDPEL----RRRLGEaarERAEERFSWEAIAERLLALYEELLA 123
GT4_sucrose_synthase cd03800
sucrose-phosphate synthase and similar proteins; This family is most closely related to the ...
764-960 7.89e-10

sucrose-phosphate synthase and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.


Pssm-ID: 340830 [Multi-domain]  Cd Length: 398  Bit Score: 61.87  E-value: 7.89e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 764 LRKQLGLyseDASQPLVACITRLVPQKGLH-LIRhAIYKTAELGGQFVLL---GSSPVPHIQREFEgvADQFQKNNniRL 839
Cdd:cd03800   210 RRARLLL---PPDKPVVLALGRLDPRKGIDtLVR-AFAQLPELRELANLVlvgGPSDDPLSMDREE--LAELAEEL--GL 281
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 840 ILKYD-------EALSHcIYAASDMFIIPSMFEPCGLTQMIAMRYGsVPIV-RQTGGLCDSVfdfddetipVELRNGFTF 911
Cdd:cd03800   282 IDRVRfpgrvsrDDLPE-LYRAADVFVVPSLYEPFGLTAIEAMACG-TPVVaTAVGGLQDIV---------RDGRTGLLV 350
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1002230293 912 ARTDEQDLSSCLERAFsyysRKPMVWKQLvqKDMQID-----FSWDSPASQYEN 960
Cdd:cd03800   351 DPHDPEALAAALRRLL----DDPALWQRL--SRAGLErarahYTWESVADQLLT 398
Glycos_transf_1 pfam00534
Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease ...
777-933 1.84e-09

Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family.


Pssm-ID: 425737 [Multi-domain]  Cd Length: 158  Bit Score: 57.28  E-value: 1.84e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 777 QPLVACITRLVPQKGLHLIRHAIYKTAELGGQFVLL--GSSPVphiQREFEGVADQFQKNNNIRLIL-KYDEALSHCiYA 853
Cdd:pfam00534   2 KKIILFVGRLEPEKGLDLLIKAFALLKEKNPNLKLViaGDGEE---EKRLKKLAEKLGLGDNVIFLGfVSDEDLPEL-LK 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 854 ASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFDFDdetipvelrNGFTFARTDEQDLSSCLERA------- 926
Cdd:pfam00534  78 IADVFVLPSRYEGFGIVLLEAMACGLPVIASDVGGPPEVVKDGE---------TGFLVKPNNAEALAEAIDKLledeelr 148

                  ....*....
gi 1002230293 927 --FSYYSRK 933
Cdd:pfam00534 149 erLGENARK 157
Glyco_trans_1_4 pfam13692
Glycosyl transferases group 1;
778-925 1.99e-09

Glycosyl transferases group 1;


Pssm-ID: 463957 [Multi-domain]  Cd Length: 138  Bit Score: 56.75  E-value: 1.99e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 778 PLVACITRLVP-QKGLHLIRHAIY--KTAELGGQFVLLGSSPVPHIQREFEGVADqfqknnNIRLiLKYDEALSHcIYAA 854
Cdd:pfam13692   2 PVILFVGRLHPnVKGVDYLLEAVPllRKRDNDVRLVIVGDGPEEELEELAAGLED------RVIF-TGFVEDLAE-LLAA 73
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1002230293 855 SDMFIIPSMFEPCGLTQMIAMRYGsVPIV-RQTGGLCDSVFDfddetipvelRNGFTFARTDEQDLSSCLER 925
Cdd:pfam13692  74 ADVFVLPSLYEGFGLKLLEAMAAG-LPVVaTDVGGIPELVDG----------ENGLLVPPGDPEALAEAILR 134
Glycosyltransferase_GTB-type cd01635
glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases ...
782-895 3.53e-08

glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


Pssm-ID: 340816 [Multi-domain]  Cd Length: 235  Bit Score: 55.49  E-value: 3.53e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 782 CITRLVPQKGLHLIRHAI--YKTAELGGQFVLLGSSPVPhiQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMFI 859
Cdd:cd01635   115 SVGRLVPEKGIDLLLEALalLKARLPDLVLVLVGGGGER--EEEEALAAALGLLERVVIIGGLVDDEVLELLLAAADVFV 192
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1002230293 860 IPSMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFD 895
Cdd:cd01635   193 LPSRSEGFGLVLLEAMAAGKPVIATDVGGIPEFVVD 228
GT4_WcaC-like cd03825
putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins; This family ...
728-964 1.04e-05

putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Escherichia coli WcaC has been predicted to function in colanic acid biosynthesis. WcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.


Pssm-ID: 340851 [Multi-domain]  Cd Length: 364  Bit Score: 48.87  E-value: 1.04e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 728 ILNGIDTGTWNPstdrflavqysatdlqgkaANKAFLRKQLGLySEDAsqPLVACITRLV--PQKGLH-LIR--HAIYKT 802
Cdd:cd03825   166 IPNGIDTEIFAP-------------------VDKAKARKRLGI-PQDK--KVILFGAESVtkPRKGFDeLIEalKLLATK 223
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 803 AELGGQFV-----LLGSSPVPHIQREFEgvadqfqkNNNIRLILkydealshcIYAASDMFIIPSMFEPCGLTQMIAMRY 877
Cdd:cd03825   224 DDLLLVVFgkndpQIVILPFDIISLGYI--------DDDEQLVD---------IYSAADLFVHPSLADNLPNTLLEAMAC 286
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 878 GSVPIVRQTGGLCDSVFDfddetipveLRNGFTFARTDEQDLSS----CLERAFSYYSRkpmvwKQLVQKDMQIDFSWDS 953
Cdd:cd03825   287 GTPVVAFDTGGSPEIVQH---------GVTGYLVPPGDVQALAEaiewLLANPKERESL-----GERARALAENHFDQRV 352
                         250
                  ....*....|.
gi 1002230293 954 PASQYENLYQS 964
Cdd:cd03825   353 QAQRYLELYKD 363
GT4_ExpE7-like cd03823
glycosyltransferase ExpE7 and similar proteins; This family is most closely related to the GT4 ...
774-962 3.76e-05

glycosyltransferase ExpE7 and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).


Pssm-ID: 340850 [Multi-domain]  Cd Length: 357  Bit Score: 46.94  E-value: 3.76e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 774 DASQPLVAC-ITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPVpHIQREFEGVAdqfqknnNIRLI--LKYDEALSHc 850
Cdd:cd03823   187 PGTERLRFGyIGRLTEEKGIDLLVEAFKRLPREDIELVIAGHGPL-SDERQIEGGR-------RIAFLgrVPTDDIKDF- 257
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 851 iYAASDMFIIPSMF-EPCGLTQMIAMRYGSVPIVRQTGGLCDSVfdfddetipVELRNGFTFARTDEQDLSSCLERAfsy 929
Cdd:cd03823   258 -YEKIDVLVVPSIWpEPFGLVVREAIAAGLPVIASDLGGIAELI---------QPGVNGLLFAPGDAEDLAAAMRRL--- 324
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1002230293 930 ySRKPMVWKQLvQKDMQIDFSWDSPASQYENLY 962
Cdd:cd03823   325 -LTDPALLERL-RAGAEPPRSTESQAEEYLKLY 355
GT4-like cd03814
glycosyltransferase family 4 proteins; This family is most closely related to the GT4 family ...
696-893 7.84e-05

glycosyltransferase family 4 proteins; This family is most closely related to the GT4 family of glycosyltransferases and includes a sequence annotated as alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol monomannoside transferase from Bacillus halodurans. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.


Pssm-ID: 340842 [Multi-domain]  Cd Length: 365  Bit Score: 46.13  E-value: 7.84e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 696 TTVSPTYALEVRSEGgRGLQDtlkmhsrkfVGILN-GIDTGTWNPStdrflavqysatdlqgkAANKAFLRKQLglyseD 774
Cdd:cd03814   148 TTLVPSPSIARELEG-HGFER---------VRLWPrGVDTELFHPS-----------------RRDAALRRRLG-----P 195
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 775 ASQPLVACITRLVPQKGLHLIRHAIYK-TAELGGQFVLLGSSPvphiQREfegvADQFQKNNNIRLILKYDEALSHcIYA 853
Cdd:cd03814   196 PGRPLLLYVGRLAPEKNLEALLDADLPlAASPPVRLVVVGDGP----ARA----ELEARGPDVIFTGFLTGEELAR-AYA 266
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1002230293 854 ASDMFIIPSMFEPCGLTQMIAMRYGsVP-IVRQTGGLCDSV 893
Cdd:cd03814   267 SADVFVFPSRTETFGLVVLEAMASG-LPvVAADAGGPRDIV 306
PRK02224 PRK02224
DNA double-strand break repair Rad50 ATPase;
54-339 3.01e-04

DNA double-strand break repair Rad50 ATPase;


Pssm-ID: 179385 [Multi-domain]  Cd Length: 880  Bit Score: 44.65  E-value: 3.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293  54 KQRSSNAKLLLTTEENGQLPSTS-LRTSMERpQKSTSSEDDTNG---AISQIDEKIAAIgNEQQERSKDKHFESDFQLED 129
Cdd:PRK02224  168 RERASDARLGVERVLSDQRGSLDqLKAQIEE-KEEKDLHERLNGlesELAELDEEIERY-EEQREQARETRDEADEVLEE 245
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 130 FGEMIQNMEKnillLNQARLQAIEDVDKILTEKEALQKKV-------DTLEMNLSKALATKGNINTDIPG--DHLEKFTK 200
Cdd:PRK02224  246 HEERREELET----LEAEIEDLRETIAETEREREELAEEVrdlrerlEELEEERDDLLAEAGLDDADAEAveARREELED 321
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 201 EI------LIESALSGGNPAHLCESpLFMELTVLKEENMLLKADAQFLKAKIvefAETEEFLFKLEKERSLLDATVRELE 274
Cdd:PRK02224  322 RDeelrdrLEECRVAAQAHNEEAES-LREDADDLEERAEELREEAAELESEL---EEAREAVEDRREEIEELEEEIEELR 397
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1002230293 275 ARFLVAQTDiwkvvplqydvwmekvenlqhmLGCLKNHVEkyaALLDQHDDLHDKIDELEASLKE 339
Cdd:PRK02224  398 ERFGDAPVD----------------------LGNAEDFLE---ELREERDELREREAELEATLRT 437
Glyco_transf_4 pfam13439
Glycosyltransferase Family 4;
496-734 3.88e-04

Glycosyltransferase Family 4;


Pssm-ID: 463877 [Multi-domain]  Cd Length: 169  Bit Score: 42.13  E-value: 3.88e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 496 GGLADVVAGLGKALQTKGHLVEIVLPKYDcmqldqitnlkvldvviqsyfdgNLFSNNVWTGTVEGLPVYFIEPqhpskf 575
Cdd:pfam13439   1 GGVERYVLELARALARRGHEVTVVTPGGP-----------------------GPLAEEVVRVVRVPRVPLPLPP------ 51
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 576 fwraqyygehdDFKRYSYFSRAALELLyqSGKKIDIIHCHDWqtafvAPLYWDIYATRGFSSARICFTCHNFEYQGTAPA 655
Cdd:pfam13439  52 -----------RLLRSLAFLRRLRRLL--RRERPDVVHAHSP-----FPLGLAALAARLRLGIPLVVTYHGLFPDYKRLG 113
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1002230293 656 PDLSYCGLDVEQLDRpdRMQDNAHGrinvakggivysniVTTVSPTyaleVRSEggrgLQDTLKMHSRKFVGILNGIDT 734
Cdd:pfam13439 114 ARLSPLRRLLRRLER--RLLRRADR--------------VIAVSEA----VADE----LRRLYGVPPEKIRVIPNGVDL 168
GT4_WfcD-like cd03795
Escherichia coli alpha-1,3-mannosyltransferase WfcD and similar proteins; This family is most ...
694-883 8.91e-04

Escherichia coli alpha-1,3-mannosyltransferase WfcD and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.


Pssm-ID: 340826 [Multi-domain]  Cd Length: 355  Bit Score: 42.65  E-value: 8.91e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 694 IVTTvSPTYALEvrSEggrglqdTLKMHSRKFVGILNGIDtgtwnpstdrflAVQYSATDLQGKAANKAFLRKQLGLYse 773
Cdd:cd03795   141 IIAT-SPNYVET--SP-------TLREFKNKVRVIPLGID------------KNVYNIPRVDFENIKREKKGKKIFLF-- 196
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 774 dasqplvacITRLVPQKGLH-LIRHAIYKTAELggqfVLLGSSPvphIQREFEGVADQfQKNNNIRLILKYDEALSHCIY 852
Cdd:cd03795   197 ---------IGRLVYYKGLDyLIEAAQYLNYPI----VIGGEGP---LKPDLEAQIEL-NLLDNVKFLGRVDDEEKVIYL 259
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1002230293 853 AASDMFIIPSMF--EPCGLTQMIAMRYGsVPIV 883
Cdd:cd03795   260 HLCDVFVFPSVLrsEAFGIVLLEAMMCG-KPVI 291
GT4_BshA-like cd04962
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA and similar proteins; This family is most ...
851-963 1.21e-03

N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA and similar proteins; This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes.


Pssm-ID: 340859 [Multi-domain]  Cd Length: 370  Bit Score: 42.34  E-value: 1.21e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 851 IYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRQTGGlcdsvfdfddetIPVELRNGFTFARTDEQDLSSCLERAFSYY 930
Cdd:cd04962   266 LLSIADLFLLPSEKESFGLAALEAMACGVPVVSSNAGG------------IPEVVKHGETGFLSDVGDVDAMAKSALSIL 333
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1002230293 931 sRKPMVWKQLVQ---KDMQIDFSWDSPASQYENLYQ 963
Cdd:cd04962   334 -EDDELYNRMGRaarKRAAERFDPERIVPQYEAYYR 368
PRK03918 PRK03918
DNA double-strand break repair ATPase Rad50;
126-400 1.73e-03

DNA double-strand break repair ATPase Rad50;


Pssm-ID: 235175 [Multi-domain]  Cd Length: 880  Bit Score: 42.36  E-value: 1.73e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 126 QLEDFGEMIQNMEKNILLLNqARLQAIEdvdKILTEKEALQKKVDTLEMNLSKALATKGNINTDIP--GDHLEKFTKEIL 203
Cdd:PRK03918  156 GLDDYENAYKNLGEVIKEIK-RRIERLE---KFIKRTENIEELIKEKEKELEEVLREINEISSELPelREELEKLEKEVK 231
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 204 -IESalsggnpahlcespLFMELTVLKEENMLLKADAQFLKAKIVefaETEEFLFKLEKERSLLDATVRELEARFLVAQT 282
Cdd:PRK03918  232 eLEE--------------LKEEIEELEKELESLEGSKRKLEEKIR---ELEERIEELKKEIEELEEKVKELKELKEKAEE 294
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 283 DIwKVVPLqYDVWMEKVENLQHMLGCLKNHVEKYAALLDQHDDLHDKIDELEASLKE--GKTSEFSPYvVELLQ------ 354
Cdd:PRK03918  295 YI-KLSEF-YEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKEleKRLEELEER-HELYEeakakk 371
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1002230293 355 ---QKLKAAKSHHQAGhqETNTHIQVYQQLTEEFQDNLGKLIEESGRLE 400
Cdd:PRK03918  372 eelERLKKRLTGLTPE--KLEKELEELEKAKEEIEEEISKITARIGELK 418
EnvC COG4942
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
87-339 2.48e-03

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 443969 [Multi-domain]  Cd Length: 377  Bit Score: 41.29  E-value: 2.48e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293  87 STSSEDDTNGAISQIDEKIAAIgNEQQERSKDKHFESDFQLEDFGEMIQNMEKNILLLNQARLQAIEDVDKILTEKEALQ 166
Cdd:COG4942    18 QADAAAEAEAELEQLQQEIAEL-EKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 167 KKVDTLEMNLSKALATkgnintdipgdhLEKFTKEILIESALSGGNPAHlcespLFMELTVLKEENMLLKADAQFLKAKI 246
Cdd:COG4942    97 AELEAQKEELAELLRA------------LYRLGRQPPLALLLSPEDFLD-----AVRRLQYLKYLAPARREQAEELRADL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 247 VEFAETEEflfKLEKERSLLDATVRELEA--RFLVAQTDiwkvvplqydvwmEKVENLQHMLGCLKNHVEKYAALLDQHD 324
Cdd:COG4942   160 AELAALRA---ELEAERAELEALLAELEEerAALEALKA-------------ERQKLLARLEKELAELAAELAELQQEAE 223
                         250
                  ....*....|....*
gi 1002230293 325 DLHDKIDELEASLKE 339
Cdd:COG4942   224 ELEALIARLEAEAAA 238
PRK03918 PRK03918
DNA double-strand break repair ATPase Rad50;
131-362 4.69e-03

DNA double-strand break repair ATPase Rad50;


Pssm-ID: 235175 [Multi-domain]  Cd Length: 880  Bit Score: 40.82  E-value: 4.69e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 131 GEMIQNMEKNILLLNQARLQAIEDVDKILTEKEALQKKVDTLEMNLSKALATKGN-------INTDIPGDHLEKFTKEIL 203
Cdd:PRK03918  383 GLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKcpvcgreLTEEHRKELLEEYTAELK 462
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 204 ----------------------IESALSGgnpahlcESPLFMELTVLKE----ENMLLKADAQFLKAKIVEFAETEEFLF 257
Cdd:PRK03918  463 riekelkeieekerklrkelreLEKVLKK-------ESELIKLKELAEQlkelEEKLKKYNLEELEKKAEEYEKLKEKLI 535
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 258 KLEKERSLLDATVRELEARflvaqtdIWKVVPLQydvwmEKVENLQHMLGCLKNHVEKYAalLDQHDDLHDKIDELEASL 337
Cdd:PRK03918  536 KLKGEIKSLKKELEKLEEL-------KKKLAELE-----KKLDELEEELAELLKELEELG--FESVEELEERLKELEPFY 601
                         250       260
                  ....*....|....*....|....*
gi 1002230293 338 KEGKTSEFSPYVVELLQQKLKAAKS 362
Cdd:PRK03918  602 NEYLELKDAEKELEREEKELKKLEE 626
GT4_WbnK-like cd03807
Shigella dysenteriae WbnK and similar proteins; This family is most closely related to the GT4 ...
695-883 5.41e-03

Shigella dysenteriae WbnK and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.


Pssm-ID: 340836 [Multi-domain]  Cd Length: 362  Bit Score: 40.38  E-value: 5.41e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 695 VTTVSPTYALEVRSEGGRglqdtlkmhSRKFVGILNGIDTGTWNPStdrflavqysatdlqgkAANKAFLRKQLGLyseD 774
Cdd:cd03807   137 TVANSSAVAEFHQEQGYA---------KNKIVVIYNGIDLFKLSPD-----------------DASRARARRRLGL---A 187
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293 775 ASQPLVACITRLVPQKGLHLIRHAIYKTAELGGQ--FVLLGSSPV-PHIQREFE--GVADQFqknnnirLILKYDEALSH 849
Cdd:cd03807   188 EDRRVIGIVGRLHPVKDHSDLLRAAALLVETHPDlrLLLVGRGPErPNLERLLLelGLEDRV-------HLLGERSDVPA 260
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1002230293 850 CiYAASDMFIIPSMFEPCGLTQMIAMRYGsVPIV 883
Cdd:cd03807   261 L-LPAMDIFVLSSRTEGFPNALLEAMACG-LPVV 292
DUF3584 pfam12128
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ...
92-277 5.85e-03

Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.


Pssm-ID: 432349 [Multi-domain]  Cd Length: 1191  Bit Score: 40.59  E-value: 5.85e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293   92 DDTNGAISQIDEKIAAiGNEQQERSKDKHFEsdFQLEDFGEMIQNMEKniLLLNQARLQAIEDVDKILTEK-EALQKKVD 170
Cdd:pfam12128  304 DELNGELSAADAAVAK-DRSELEALEDQHGA--FLDADIETAAADQEQ--LPSWQSELENLEERLKALTGKhQDVTAKYN 378
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002230293  171 TLEMNLSKALATK-GNINTDIPGDHLEKFTKEILIESALSGgnpahlCESPLFMEL----TVLKEENMLLKADAQFLKAK 245
Cdd:pfam12128  379 RRRSKIKEQNNRDiAGIKDKLAKIREARDRQLAVAEDDLQA------LESELREQLeagkLEFNEEEYRLKSRLGELKLR 452
                          170       180       190
                   ....*....|....*....|....*....|..
gi 1002230293  246 IVEFAETEEFLFKLEKERSLLDATVRELEARF 277
Cdd:pfam12128  453 LNQATATPELLLQLENFDERIERAREEQEAAN 484
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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