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Conserved domains on  [gi|1002288401|ref|XP_015648499|]
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uncharacterized protein [Oryza sativa Japonica Group]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PTZ00341 super family cl31759
Ring-infected erythrocyte surface antigen; Provisional
 90-182 1.12e-03

Ring-infected erythrocyte surface antigen; Provisional


The actual alignment was detected with superfamily member PTZ00341:

Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 39.00  E-value: 1.12e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002288401   90 VEDETARNVETAAE--VVEQIAE-VTEKLASNVADHLPENGCLQKVVEKIEYIAEVVDEDAEKVEAITEKI-ENFSDKID 165
Cdd:PTZ00341   979 VEENVEENVEENVEenVEENVEEnIEENVEENVEENIEENVEEYDEENVEEVEENVEEYDEENVEEIEENAeENVEENIE 1058

                           90
                   ....*....|....*..
gi 1002288401  166 AKVEPIFTEIEKEFEDS 182
Cdd:PTZ00341  1059 ENIEEYDEENVEEIEEN 1075
 
Name Accession Description Interval E-value
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 90-182 1.12e-03

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 39.00  E-value: 1.12e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002288401   90 VEDETARNVETAAE--VVEQIAE-VTEKLASNVADHLPENGCLQKVVEKIEYIAEVVDEDAEKVEAITEKI-ENFSDKID 165
Cdd:PTZ00341   979 VEENVEENVEENVEenVEENVEEnIEENVEENVEENIEENVEEYDEENVEEVEENVEEYDEENVEEIEENAeENVEENIE 1058

                           90
                   ....*....|....*..
gi 1002288401  166 AKVEPIFTEIEKEFEDS 182
Cdd:PTZ00341  1059 ENIEEYDEENVEEIEEN 1075
MA smart00283
Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Thought to undergo ...
 92-171 4.75e-03

Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.


Pssm-ID: 214599 [Multi-domain]  Cd Length: 262  Bit Score: 36.88  E-value: 4.75e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002288401   92 DETARNVETAAEVVEQIAEVTEKLASNVAD--HLPENGclQKVVEKIEYIAEVVDEDAEKVEAITEKIENFSDKIDAKVE 169
Cdd:smart00283  21 EELAERMEELSASIEEVAANADEIAATAQSaaEAAEEG--REAVEDAITAMDQIREVVEEAVSAVEELEESSDEIGEIVS 98


                   ..
gi 1002288401  170 PI 171
Cdd:smart00283  99 VI 100
 
Name Accession Description Interval E-value
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 90-182 1.12e-03

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 39.00  E-value: 1.12e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002288401   90 VEDETARNVETAAE--VVEQIAE-VTEKLASNVADHLPENGCLQKVVEKIEYIAEVVDEDAEKVEAITEKI-ENFSDKID 165
Cdd:PTZ00341   979 VEENVEENVEENVEenVEENVEEnIEENVEENVEENIEENVEEYDEENVEEVEENVEEYDEENVEEIEENAeENVEENIE 1058

                           90
                   ....*....|....*..
gi 1002288401  166 AKVEPIFTEIEKEFEDS 182
Cdd:PTZ00341  1059 ENIEEYDEENVEEIEEN 1075
MA smart00283
Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Thought to undergo ...
 92-171 4.75e-03

Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.


Pssm-ID: 214599 [Multi-domain]  Cd Length: 262  Bit Score: 36.88  E-value: 4.75e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002288401   92 DETARNVETAAEVVEQIAEVTEKLASNVAD--HLPENGclQKVVEKIEYIAEVVDEDAEKVEAITEKIENFSDKIDAKVE 169
Cdd:smart00283  21 EELAERMEELSASIEEVAANADEIAATAQSaaEAAEEG--REAVEDAITAMDQIREVVEEAVSAVEELEESSDEIGEIVS 98


                   ..
gi 1002288401  170 PI 171
Cdd:smart00283  99 VI 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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