|
Name |
Accession |
Description |
Interval |
E-value |
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
27-773 |
0e+00 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 990.41 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 27 MAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDVSSDRQEPGRRGRSWGLEGSQALSQQAEVIVRQLQELRRLEE 106
Cdd:pfam07111 1 MAPTWASDIPLVQSPGHQDVLERRLDTQRPTVTMWEQDVSGDGQGPGRRGRSLELEGSQALSQQAELISRQLQELRRLEE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 107 EVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLEEGSQRELEEVQRLHQEQLSSLTQAH 186
Cdd:pfam07111 81 EVRLLRETSLQQKMRLEAQAMELDALAVAEKAGQAEAEGLRAALAGAEMVRKNLEEGSQRELEEIQRLHQEQLSSLTQAH 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 187 EEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQVTLVENLRKYVGEQVPSEVHSQTW 266
Cdd:pfam07111 161 EEALSSLTSKAEGLEKSLNSLETKRAGEAKQLAEAQKEAELLRKQLSKTQEELEAQVTLVESLRKYVGEQVPPEVHSQTW 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 267 ELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKVFALMV 346
Cdd:pfam07111 241 ELERQELLDTMQHLQEDRADLQATVELLQVRVQSLTHMLALQEEELTRKIQPSDSLEPEFPKKCRSLLNRWREKVFALMV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 347 QLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGLQLELSRAQEARRRWQQQTASAE 426
Cdd:pfam07111 321 QLKAQDLEHRDSVKQLRGQVAELQEQVTSQSQEQAILQRALQDKAAEVEVERMSAKGLQMELSRAQEARRRQQQQTASAE 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 427 EQLRLVVNAVSSSQIWLETTMAKVEGAAAQLPSLNNRLSYAVRKVHTIRGLIARKLALAQLRQESCPLPPPV----TDVS 502
Cdd:pfam07111 401 EQLKFVVNAMSSTQIWLETTMTRVEQAVARIPSLSNRLSYAVRKVHTIKGLMARKVALAQLRQESCPPPPPAppvdADLS 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 503 LELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQESLASLGLQLEVARQGQQESTEE 582
Cdd:pfam07111 481 LELEQLREERNRLDAELQLSAHLIQQEVGRAREQGEAERQQLSEVAQQLEQELQRAQESLASVGQQLEVARQGQQESTEE 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 583 AASLRQELTQQQELYGQALQEKVAEVETRLREQLSDTERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEAR 662
Cdd:pfam07111 561 AASLRQELTQQQEIYGQALQEKVAEVETRLREQLSDTKRRLNEARREQAKAVVSLRQIQHRATQEKERNQELRRLQDEAR 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 663 KEEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQRLLTVLPSLLDkKKSVVSSPRpPECSASAPVAAAVPTRESIKG 742
Cdd:pfam07111 641 KEEGQRLARRVQELERDKNLMLATLQQEGLLSRYKQQRLLAVLPSGLD-KKSVVSSPR-PECSASAPIPAAVPTRESIKG 718
|
730 740 750
....*....|....*....|....*....|.
gi 1034650596 743 SLSVLLDDLQDLSEAISKEEAVCQGDNLDRC 773
Cdd:pfam07111 719 SLTVLLDNLQGLSEAISREEAVCQEDNQDTC 749
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
87-679 |
2.50e-20 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 96.54 E-value: 2.50e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 87 LSQQAEV--IVRQLQ-ELRRLEEEVRLLRETSLQQkmRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLEEG 163
Cdd:COG1196 205 LERQAEKaeRYRELKeELKELEAELLLLKLRELEA--ELEELEAELEELEAELEELEAELAELEAELEELRLELEELELE 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 164 SQRELEEVQRLHQE--QLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEA 241
Cdd:COG1196 283 LEEAQAEEYELLAElaRLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAE 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 242 QVTLVENLRKYVGEQVpsevhsQTWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQpsds 321
Cdd:COG1196 363 AEEALLEAEAELAEAE------EELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAE---- 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 322 lepeftrkcqslLNRWREKVFALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGA 401
Cdd:COG1196 433 ------------LEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAE 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 402 KGLQLELSRAQEARRRWQQQTASAEEQLRlvvnavsssqIWLETTMAKVEGAAAQLPSLNNRLSYAVRKVHTIRGLIARK 481
Cdd:COG1196 501 ADYEGFLEGVKAALLLAGLRGLAGAVAVL----------IGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAK 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 482 LALAQLRQESCPLPPPVTDVSLELQQLREERNRLDAELQ----LSARLIQQEVGRAREQGEAE-RQQLSKVAQQLEQELQ 556
Cdd:COG1196 571 AGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLReadaRYYVLGDTLLGRTLVAARLEaALRRAVTLAGRLREVT 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 557 QTQESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDTERRLNEARREHAKAVVS 636
Cdd:COG1196 651 LEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQL 730
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 1034650596 637 LRQIQRRAAQEKERSQELRRLQEEARKEEGQR--LARRLQELERD 679
Cdd:COG1196 731 EAEREELLEELLEEEELLEEEALEELPEPPDLeeLERELERLERE 775
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
94-712 |
3.38e-17 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 86.73 E-value: 3.38e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 94 IVRQLQELRRLEE-----EVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLEEGSQ--- 165
Cdd:PTZ00121 1168 EARKAEDAKKAEAarkaeEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKaee 1247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 166 -------RELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKS---LSSLETRRAGEAKELAEAQREAELLRKQLSKT 235
Cdd:PTZ00121 1248 ernneeiRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKAdeaKKAEEKKKADEAKKKAEEAKKADEAKKKAEEA 1327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 236 QEDLEAQVTLVENLRKyVGEQVPSEVHSQTWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRK 315
Cdd:PTZ00121 1328 KKKADAAKKKAEEAKK-AAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKK 1406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 316 VQPSDSLEPEfTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQlKGQVASLQEKVTSQSQEqAILQRSLQDKAAEVE 395
Cdd:PTZ00121 1407 ADELKKAAAA-KKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKK-KAEEAKKAEEAKKKAEE-AKKADEAKKKAEEAK 1483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 396 VERMGAKGLQLELSRAQEARRRWQQQTASaeEQLRLVVNAVSSSQIWLETTMAKVEGAAAqlpSLNNRLSYAVRKVHTIR 475
Cdd:PTZ00121 1484 KADEAKKKAEEAKKKADEAKKAAEAKKKA--DEAKKAEEAKKADEAKKAEEAKKADEAKK---AEEKKKADELKKAEELK 1558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 476 GLIARKLALAQLRQEScplpppvtDVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQEL 555
Cdd:PTZ00121 1559 KAEEKKKAEEAKKAEE--------DKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEE 1630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 556 QQTQESLASLGLQLEVARQGQQESTEEAASLRQEltqqqELYGQALQEKVAEVETRLREQlsdTERRLNEARREHAKAVV 635
Cdd:PTZ00121 1631 EKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAA-----EEAKKAEEDKKKAEEAKKAEE---DEKKAAEALKKEAEEAK 1702
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 636 SLRQIQRRAAQEKERSQELRRLQEE---------ARKEEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQRLLTVLP 706
Cdd:PTZ00121 1703 KAEELKKKEAEEKKKAEELKKAEEEnkikaeeakKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIE 1782
|
....*.
gi 1034650596 707 SLLDKK 712
Cdd:PTZ00121 1783 EELDEE 1788
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
85-659 |
1.88e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 80.75 E-value: 1.88e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 85 QALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLE--- 161
Cdd:COG1196 239 AELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEerl 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 162 ---EGSQRELEEVQRLHQEQLSSLtqahEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQED 238
Cdd:COG1196 319 eelEEELAELEEELEELEEELEEL----EEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 239 LEAQVTLVENLRkyvgeqvpsevhsqtwELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQp 318
Cdd:COG1196 395 AAELAAQLEELE----------------EAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEE- 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 319 sdslepeftrkcqsllnrwREKVFALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVER 398
Cdd:COG1196 458 -------------------EEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAG 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 399 MGAKGLQLELSRAQEARRRWQQQTASAEEQLRLVVNAVSSSQIWLETTMAKVEGAAAQLPsLNNRLSYAVRKVHTIRGLI 478
Cdd:COG1196 519 LRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLP-LDKIRARAALAAALARGAI 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 479 ARKLALAQLRQESCPLPPPVTDVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQT 558
Cdd:COG1196 598 GAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEA 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 559 QESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDTERRLNEARREHAKAVVSLR 638
Cdd:COG1196 678 EAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELP 757
|
570 580
....*....|....*....|.
gi 1034650596 639 QIQRRAAQEKERSQELRRLQE 659
Cdd:COG1196 758 EPPDLEELERELERLEREIEA 778
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
105-678 |
3.65e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 70.56 E-value: 3.65e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 105 EEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEaEGLRaalagAEVVRKnLEEGsqRELEEVQRLhqEQLSSLTQ 184
Cdd:PTZ00121 1094 EEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAE-EARK-----AEDARK-AEEA--RKAEDAKRV--EIARKAED 1162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 185 AHEEALSSLTSKAEGLEKSLSSLETRRAGEAKEL-----AEAQREAELLRK--QLSKTQEDLEAQ-VTLVENLRKYVGEQ 256
Cdd:PTZ00121 1163 ARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAedarkAEAARKAEEERKaeEARKAEDAKKAEaVKKAEEAKKDAEEA 1242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 257 VPSEvHSQTWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSL--EPEFTRKCQSLL 334
Cdd:PTZ00121 1243 KKAE-EERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAkkKAEEAKKADEAK 1321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 335 NRWRE-KVFALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGLQLELSRAQE 413
Cdd:PTZ00121 1322 KKAEEaKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAE 1401
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 414 ARRRWQQQTASAEEQLRLVVNAVSSSQIWLETTMAKVEGAAAQLPSLNNRLSYAVRKVHTIRGLIARKLALAQLRQ---- 489
Cdd:PTZ00121 1402 EDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKkaee 1481
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 490 -----ESCPLPPPVTDVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAER----------------QQLSKVA 548
Cdd:PTZ00121 1482 akkadEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEakkaeekkkadelkkaEELKKAE 1561
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 549 QQLEQELQQTQESLASLGL-QLEVARQGQQESTEEAASLR--------QELTQQQELYGQALQEKVAEVETRLREQLSDT 619
Cdd:PTZ00121 1562 EKKKAEEAKKAEEDKNMALrKAEEAKKAEEARIEEVMKLYeeekkmkaEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKK 1641
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034650596 620 E----RRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRL-----ARRLQELER 678
Cdd:PTZ00121 1642 EaeekKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKkeaeeAKKAEELKK 1709
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
88-701 |
2.18e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 67.77 E-value: 2.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 88 SQQAEVIVRQLQELRRLEEEVRLLRETSLQQKmrLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLEEGSQRE 167
Cdd:TIGR02168 209 AEKAERYKELKAELRELELALLVLRLEELREE--LEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEEL 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 168 LEEVQRLHQEQ--LSSLTQAHEEALSSLTSKAEGLEKSLSSLETRR-------AGEAKELAEAQREAELLRKQLSKTQED 238
Cdd:TIGR02168 287 QKELYALANEIsrLEQQKQILRERLANLERQLEELEAQLEELESKLdelaeelAELEEKLEELKEELESLEAELEELEAE 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 239 LEAQVTLVENLRKYVgEQVPSEVHSQTWEL-----ERQKLLETMQHLQEDRDSLHATAELL------------QVRVQSL 301
Cdd:TIGR02168 367 LEELESRLEELEEQL-ETLRSKVAQLELQIaslnnEIERLEARLERLEDRRERLQQEIEELlkkleeaelkelQAELEEL 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 302 THILALQEEELTRKVQPSDSLEPEFTRKCQSL------LNRWREKVFALmVQLKAQELEHSDSVKQLK-------GQVAS 368
Cdd:TIGR02168 446 EEELEELQEELERLEEALEELREELEEAEQALdaaereLAQLQARLDSL-ERLQENLEGFSEGVKALLknqsglsGILGV 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 369 LQEKVTSQSQ-EQAI---LQRSLQ------DKAAEVEVERM-------------------GAKGLQLELSRAQEARRRWQ 419
Cdd:TIGR02168 525 LSELISVDEGyEAAIeaaLGGRLQavvvenLNAAKKAIAFLkqnelgrvtflpldsikgtEIQGNDREILKNIEGFLGVA 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 420 QQTASAEEQLRLVVNAVSSSQIWLETtmakVEGAAAQLPSLNNRLSYAVRKVHTIR--------------GLIARKLALA 485
Cdd:TIGR02168 605 KDLVKFDPKLRKALSYLLGGVLVVDD----LDNALELAKKLRPGYRIVTLDGDLVRpggvitggsaktnsSILERRREIE 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 486 QLRQESCPLPPPVTDVSLELQQLREERNRLDAELQLsARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQESLASL 565
Cdd:TIGR02168 681 ELEEKIEELEEKIAELEKALAELRKELEELEEELEQ-LRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTEL 759
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 566 GLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAevetrLREQLSDTERRLNEARREHAKAVVSLRQIQRRAA 645
Cdd:TIGR02168 760 EAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKA-----LREALDELRAELTLLNEEAANLRERLESLERRIA 834
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*.
gi 1034650596 646 QEKERSQELRRlQEEARKEEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQRL 701
Cdd:TIGR02168 835 ATERRLEDLEE-QIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEAL 889
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
85-681 |
5.92e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 66.23 E-value: 5.92e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 85 QALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLEEGS 164
Cdd:TIGR02168 337 EELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRR 416
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 165 QRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQVT 244
Cdd:TIGR02168 417 ERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLER 496
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 245 LVENLRKYvGEQVPSEVHSQT------------------WELERQKLL-ETMQHLQEDRDS--LHATAELLQVRVQSLTH 303
Cdd:TIGR02168 497 LQENLEGF-SEGVKALLKNQSglsgilgvlselisvdegYEAAIEAALgGRLQAVVVENLNaaKKAIAFLKQNELGRVTF 575
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 304 ILALQEEEltRKVQPSDSLEPEFTRKCQSLLNRWRE------KVFALMVQL------------KAQELEHSDSVKQLKGQ 365
Cdd:TIGR02168 576 LPLDSIKG--TEIQGNDREILKNIEGFLGVAKDLVKfdpklrKALSYLLGGvlvvddldnaleLAKKLRPGYRIVTLDGD 653
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 366 VASLQEKVT--SQSQEQAILQRSLQDKAAEVEVERMGAK--GLQLELSRAQEARRRWQQQTASAEEQLRLVVNAVSSSQI 441
Cdd:TIGR02168 654 LVRPGGVITggSAKTNSSILERRREIEELEEKIEELEEKiaELEKALAELRKELEELEEELEQLRKELEELSRQISALRK 733
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 442 WLETTMAKVEGAAAQLPSLN-NRLSYAVRKVHTIRGLIARKLALAQLRQESCPLPPPVTDVSLELQQLREERNRLDAELQ 520
Cdd:TIGR02168 734 DLARLEAEVEQLEERIAQLSkELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELT 813
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 521 -LSARLIQQEVGRAREQGEAER-----QQLSKVAQQLEQELQQTQESLASLGLQLEVARQGQQESTEEAASLRQELTQQQ 594
Cdd:TIGR02168 814 lLNEEAANLRERLESLERRIAAterrlEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLR 893
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 595 ELYgQALQEKVAEVETR---LREQLSDTERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLAR 671
Cdd:TIGR02168 894 SEL-EELSEELRELESKrseLRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARR 972
|
650
....*....|
gi 1034650596 672 RLQELERDKN 681
Cdd:TIGR02168 973 RLKRLENKIK 982
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
361-708 |
1.00e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 65.34 E-value: 1.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 361 QLKGQVASLQEKVtsqsqEQAILQRSLQDKAAEVEVERMGAK--GLQLELSRAQEARRRWQQQTASAEEQLRLVVNAVSS 438
Cdd:COG1196 197 ELERQLEPLERQA-----EKAERYRELKEELKELEAELLLLKlrELEAELEELEAELEELEAELEELEAELAELEAELEE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 439 SQIWLETTMAKVEGAAAQLPSLNNRLSyavRKVHTIRGLIARKLALAQLRQEscplpppvtdVSLELQQLREERNRLDAE 518
Cdd:COG1196 272 LRLELEELELELEEAQAEEYELLAELA---RLEQDIARLEERRRELEERLEE----------LEEELAELEEELEELEEE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 519 LQlsarLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELyg 598
Cdd:COG1196 339 LE----ELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEAL-- 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 599 QALQEKVAEVETRLREQLSDTERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELER 678
Cdd:COG1196 413 LERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAAR 492
|
330 340 350
....*....|....*....|....*....|
gi 1034650596 679 DKNLMLATLQQEGLLSRYKQQRLLTVLPSL 708
Cdd:COG1196 493 LLLLLEAEADYEGFLEGVKAALLLAGLRGL 522
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
84-422 |
4.66e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 63.62 E-value: 4.66e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 84 SQALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLEeg 163
Cdd:PTZ00121 1485 ADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEE-- 1562
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 164 sQRELEEVQRLHQEQLSSLTQAH-----EEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQED 238
Cdd:PTZ00121 1563 -KKKAEEAKKAEEDKNMALRKAEeakkaEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKK 1641
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 239 LEAQVTLVENLRKYVGEQVPSEVHSQTWELERQKLLETMQHLQEDRdslHATAELLQvrvqslthilalQEEELTRKVQP 318
Cdd:PTZ00121 1642 EAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE---KKAAEALK------------KEAEEAKKAEE 1706
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 319 SDSLEPEFTRKCQSLLNRWREKvfalmvQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEqaiLQRSLQDKAAEVEVER 398
Cdd:PTZ00121 1707 LKKKEAEEKKKAEELKKAEEEN------KIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAH---LKKEEEKKAEEIRKEK 1777
|
330 340
....*....|....*....|....
gi 1034650596 399 MGAkgLQLELSRAQEARRRWQQQT 422
Cdd:PTZ00121 1778 EAV--IEEELDEEDEKRRMEVDKK 1799
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
82-629 |
1.99e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.11 E-value: 1.99e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 82 EGSQALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLE 161
Cdd:COG1196 302 QDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEEL 381
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 162 EGSQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEA 241
Cdd:COG1196 382 EELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL 461
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 242 QVTLVENLRKYvgeqvpsevhsqtwELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDS 321
Cdd:COG1196 462 LELLAELLEEA--------------ALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVA 527
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 322 LEPEFTRKCQSLLNRwrekvfALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGA 401
Cdd:COG1196 528 VLIGVEAAYEAALEA------ALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAV 601
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 402 KGLQLELSRAQEARRRWQQQTASAeeqlRLVVNAVSSSQIWLETTMAKVEGAAAQLPSLNNRLSYAVRKVHTIRGLIARK 481
Cdd:COG1196 602 DLVASDLREADARYYVLGDTLLGR----TLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEA 677
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 482 LALAQLRQEScplpppvtdVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQES 561
Cdd:COG1196 678 EAELEELAER---------LAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELL 748
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034650596 562 LASLGLQLEVArqgqqESTEEAASLRQELTQQQELYG----QALQEkVAEVETR---LREQLSDterrLNEARRE 629
Cdd:COG1196 749 EEEALEELPEP-----PDLEELERELERLEREIEALGpvnlLAIEE-YEELEERydfLSEQRED----LEEARET 813
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
92-639 |
7.37e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.00 E-value: 7.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 92 EVIVRQLQELRRLEEEVRLLREtsLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLEEgsqrELEEV 171
Cdd:COG4913 255 EPIRELAERYAAARERLAELEY--LRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALRE----ELDEL 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 172 QRLHQ-------EQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQVT 244
Cdd:COG4913 329 EAQIRgnggdrlEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALA 408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 245 LVENLRKYVGEQVpSEVHSQTWELERQKL-----LETM-----QHLQEDRDSLHATAELLQVRvqslthilalQEEE--- 311
Cdd:COG4913 409 EAEAALRDLRREL-RELEAEIASLERRKSniparLLALrdalaEALGLDEAELPFVGELIEVR----------PEEErwr 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 312 -----------LTRKVQPSDslEPEFTRKCQSLLNRWREKVFALMVQLKAQELEHSDSvkqlkgqvASLQEKVTSQSQE- 379
Cdd:COG4913 478 gaiervlggfaLTLLVPPEH--YAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDP--------DSLAGKLDFKPHPf 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 380 QAILQRSLQDKAAEVEVE-----RMGAKGLQLELSRAQEARRRWQQQTASAEEQLRLVVNAVsssqiwlettmAKVEGAA 454
Cdd:COG4913 548 RAWLEAELGRRFDYVCVDspeelRRHPRAITRAGQVKGNGTRHEKDDRRRIRSRYVLGFDNR-----------AKLAALE 616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 455 AQLPSLNNRLSYA---VRKVHTIRGLIARKLALAQLRQESCPLPPPVTDVSLELQQLREERNRLDAELQLSARLiQQEVG 531
Cdd:COG4913 617 AELAELEEELAEAeerLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAELEAELERLDASSDDLAAL-EEQLE 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 532 RAREQGEAERQQLSKVaqqleqelqqtQESLASLGLQLEVARQGQQESTE--EAASLRQELTQQQELYGQALQEKVAEVE 609
Cdd:COG4913 696 ELEAELEELEEELDEL-----------KGEIGRLEKELEQAEEELDELQDrlEAAEDLARLELRALLEERFAAALGDAVE 764
|
570 580 590
....*....|....*....|....*....|
gi 1034650596 610 TRLREQLSDTERRLNEARREHAKAVVSLRQ 639
Cdd:COG4913 765 RELRENLEERIDALRARLNRAEEELERAMR 794
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
85-677 |
2.40e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.45 E-value: 2.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 85 QALSQQAEVIVRQLQELR--RLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVR----K 158
Cdd:COG4913 265 AAARERLAELEYLRAALRlwFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRleqlE 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 159 NLEEGSQRELEEVQRLHQEQLSSLTQAHEEALSSltskAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQED 238
Cdd:COG4913 345 REIERLERELEERERRRARLEALLAALGLPLPAS----AEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRE 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 239 LEAQVTLVENLRKyVGEQVPSEVHsqtwelERQKLLEtmQHLQEDRDSLHATAELLQVR---------VQSLTHILAL-- 307
Cdd:COG4913 421 LRELEAEIASLER-RKSNIPARLL------ALRDALA--EALGLDEAELPFVGELIEVRpeeerwrgaIERVLGGFALtl 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 308 -----QEEELTR--------------KVQPSDSLEPEFTRKCQSLLNR--WREKVFALMVQlkaQELEHS------DSVK 360
Cdd:COG4913 492 lvppeHYAAALRwvnrlhlrgrlvyeRVRTGLPDPERPRLDPDSLAGKldFKPHPFRAWLE---AELGRRfdyvcvDSPE 568
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 361 QLK---------GQV---ASLQEK-VTSQSQEQAILQRSLQDKAAEVEVERmgaKGLQLELSRAQEARRRWQQQTASAEE 427
Cdd:COG4913 569 ELRrhpraitraGQVkgnGTRHEKdDRRRIRSRYVLGFDNRAKLAALEAEL---AELEEELAEAEERLEALEAELDALQE 645
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 428 QLRL--VVNAVSSSQIwlettmaKVEGAAAQLPSLNNRLsyavrkvhtiRGLIARKLALAQLRQEscplpppVTDVSLEL 505
Cdd:COG4913 646 RREAlqRLAEYSWDEI-------DVASAEREIAELEAEL----------ERLDASSDDLAALEEQ-------LEELEAEL 701
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 506 QQLREERNRLDAElqlsARLIQQEVGRAREQGEAERQQLSKVAqqleqelqqtqeSLASLGLQLEVARQGQQESTEEA-A 584
Cdd:COG4913 702 EELEEELDELKGE----IGRLEKELEQAEEELDELQDRLEAAE------------DLARLELRALLEERFAAALGDAVeR 765
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 585 SLRQELTQQQElygqALQEKVAEVETRLREQLSDTERRLNEARREHAKAVVSLRQIQRRaaqekersqeLRRLQEEARKE 664
Cdd:COG4913 766 ELRENLEERID----ALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLAL----------LDRLEEDGLPE 831
|
650
....*....|...
gi 1034650596 665 EGQRLARRLQELE 677
Cdd:COG4913 832 YEERFKELLNENS 844
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
93-702 |
5.50e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.07 E-value: 5.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 93 VIVRQLQELRRLEEEvrllRETSLQ-QKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRknleEGSQRELEEV 171
Cdd:TIGR02169 192 IIDEKRQQLERLRRE----REKAERyQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEEL----EKLTEEISEL 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 172 QRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQVTLVENLRK 251
Cdd:TIGR02169 264 EKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELER 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 252 YVGEqvpsevhsqtWELERQKLLETMQHLQEDRdslhataELLQVRVQSLTHILALQEEELTRKVQPSDSLEPEFTRkcq 331
Cdd:TIGR02169 344 EIEE----------ERKRRDKLTEEYAELKEEL-------EDLRAELEEVDKEFAETRDELKDYREKLEKLKREINE--- 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 332 slLNRWREKVFALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGLQLELSRA 411
Cdd:TIGR02169 404 --LKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRV 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 412 QEARRRWQQQTASAEEQLRLVVNAVSSS---QIWLETTMAKVEGAAAQLPS------------LNNRLSYAVRK-----V 471
Cdd:TIGR02169 482 EKELSKLQRELAEAEAQARASEERVRGGravEEVLKASIQGVHGTVAQLGSvgeryataievaAGNRLNNVVVEddavaK 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 472 HTIRGLIARK------LALAQLRQESCPLPPP----VTDVSLELQQLREER--------------NRLDA--ELQLSARL 525
Cdd:TIGR02169 562 EAIELLKRRKagratfLPLNKMRDERRDLSILsedgVIGFAVDLVEFDPKYepafkyvfgdtlvvEDIEAarRLMGKYRM 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 526 IQQ-----EVGRAREQGEAERQQLSKVAQQLEQELQQTQESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYG-- 598
Cdd:TIGR02169 642 VTLegelfEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGei 721
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 599 -------QALQEKVAEVETRLREQLSDTERRLNEARREHAKAVVSLRQIQRRAAQEKE---------RSQELRRLQEEAR 662
Cdd:TIGR02169 722 ekeieqlEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEalndlearlSHSRIPEIQAELS 801
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 1034650596 663 K--EEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQRLL 702
Cdd:TIGR02169 802 KleEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRI 843
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
86-699 |
7.33e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 7.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 86 ALSQQAEVIVRQLQELRRLEEEVRLLREtslqQKMRLEaqamELEALARAEKAGRAEAEGLRAALAGAEVVRKNLEegsQ 165
Cdd:COG4913 222 DTFEAADALVEHFDDLERAHEALEDARE----QIELLE----PIRELAERYAAARERLAELEYLRAALRLWFAQRR---L 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 166 RELEEVQRLHQEQLssltQAHEEALSSLTSKAEGLEKSLSSLETRRAG-EAKELAEAQREAELLRKQLSKTQEDLEAQVT 244
Cdd:COG4913 291 ELLEAELEELRAEL----ARLEAELERLEARLDALREELDELEAQIRGnGGDRLEQLEREIERLERELEERERRRARLEA 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 245 LVENLrkyvGEQVPSEvhSQTWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRkVQPSDSLEP 324
Cdd:COG4913 367 LLAAL----GLPLPAS--AEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIAS-LERRKSNIP 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 325 EFTRKCQSLLNR---WRE---KVFALMVQLKAQELEHSDSV-KQLKGQVASLqekvtsqsqeqaILQRSLQDKAAEVeVE 397
Cdd:COG4913 440 ARLLALRDALAEalgLDEaelPFVGELIEVRPEEERWRGAIeRVLGGFALTL------------LVPPEHYAAALRW-VN 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 398 RMGAKGlQLELSRAQEARRRWQQQTASAEEQLRLVVNAVSSSQIWLETTMAKVEGAA-----AQLpslnNRLSYAVrkvh 472
Cdd:COG4913 507 RLHLRG-RLVYERVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAWLEAELGRRFDYVcvdspEEL----RRHPRAI---- 577
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 473 TIRGLIARKLALAQLRQESCPLPPPVT--DVSLELQQLREERNRLDAELqlsarliqQEVGRAREQGEAERQQLSKVAQQ 550
Cdd:COG4913 578 TRAGQVKGNGTRHEKDDRRRIRSRYVLgfDNRAKLAALEAELAELEEEL--------AEAEERLEALEAELDALQERREA 649
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 551 LEQELQQTQESLASLGLQLEVARQGQQ-ESTEEAASLRQELTQQQElygqALQEKVAEVETRLREqLSDTERRLNEARRE 629
Cdd:COG4913 650 LQRLAEYSWDEIDVASAEREIAELEAElERLDASSDDLAALEEQLE----ELEAELEELEEELDE-LKGEIGRLEKELEQ 724
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034650596 630 HAKAVVSLRQIQRRAAQEKERSQELR---RLQEEARKEEGQRLARRLQELERDKNLMLATLQQ--EGLLSRYKQQ 699
Cdd:COG4913 725 AEEELDELQDRLEAAEDLARLELRALleeRFAAALGDAVERELRENLEERIDALRARLNRAEEelERAMRAFNRE 799
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
82-325 |
1.59e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.53 E-value: 1.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 82 EGSQALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLE 161
Cdd:TIGR02169 706 ELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLE 785
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 162 --------EGSQRELEEVQRLHQEQLSSLtQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLS 233
Cdd:TIGR02169 786 arlshsriPEIQAELSKLEEEVSRIEARL-REIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKE 864
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 234 KTQEDLEAQVTLVENLRKYVGEqvpsevhsqtWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELT 313
Cdd:TIGR02169 865 ELEEELEELEAALRDLESRLGD----------LKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELS 934
|
250
....*....|..
gi 1034650596 314 RKVQPSDSLEPE 325
Cdd:TIGR02169 935 EIEDPKGEDEEI 946
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
413-690 |
2.08e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 48.13 E-value: 2.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 413 EARRRWQ--QQTASAEEQLRLVVNAVSSSQIWLETtmAKVEGAAAQLPSLNNRLSYAVRKVHTIRGLIARKLA-LAQLRQ 489
Cdd:TIGR02168 197 ELERQLKslERQAEKAERYKELKAELRELELALLV--LRLEELREELEELQEELKEAEEELEELTAELQELEEkLEELRL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 490 ESCPLPPPVTDVSLELQQLREERNRLDAELQ-LSARLIQ-----QEVGRAREQGEAERQQLSKVAQQLEQELQQTQESLA 563
Cdd:TIGR02168 275 EVSELEEEIEELQKELYALANEISRLEQQKQiLRERLANlerqlEELEAQLEELESKLDELAEELAELEEKLEELKEELE 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 564 SLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVET--RLREQLSDTERRLNEARREHAKAVVSLRQIQ 641
Cdd:TIGR02168 355 SLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEieRLEARLERLEDRRERLQQEIEELLKKLEEAE 434
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1034650596 642 RRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERDKNLMLATLQQE 690
Cdd:TIGR02168 435 LKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERE 483
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
357-664 |
2.11e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 48.13 E-value: 2.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 357 DSVKQLKGQVASLQEKVtsqsqEQAILQRSLQDKAAEVEVERmgakgLQLELSRAQEARRRWQQQTASAEEQLRLVVNAV 436
Cdd:TIGR02168 193 DILNELERQLKSLERQA-----EKAERYKELKAELRELELAL-----LVLRLEELREELEELQEELKEAEEELEELTAEL 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 437 SSSQIWLETTMA-------KVEGAAAQLPSLNNRLS--------YAVRKVHTIRGLIARKLALAQLRQESCPLPPPVTDV 501
Cdd:TIGR02168 263 QELEEKLEELRLevseleeEIEELQKELYALANEISrleqqkqiLRERLANLERQLEELEAQLEELESKLDELAEELAEL 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 502 SLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQEsLASLGLQLEVARQGQQESTE 581
Cdd:TIGR02168 343 EEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNE-IERLEARLERLEDRRERLQQ 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 582 EAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDTERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEA 661
Cdd:TIGR02168 422 EIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENL 501
|
...
gi 1034650596 662 RKE 664
Cdd:TIGR02168 502 EGF 504
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
89-700 |
3.09e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 47.76 E-value: 3.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 89 QQAEVIVRQLQ-ELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLE---EGS 164
Cdd:TIGR02169 318 EDAEERLAKLEaEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYReklEKL 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 165 QRELEEVQRLHQEQLSSLTQAHEEaLSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAqvt 244
Cdd:TIGR02169 398 KREINELKRELDRLQEELQRLSEE-LADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYD--- 473
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 245 LVENLRKYVGEQvpSEVHSQTWELE-RQKLLETMQH--------LQEDRDSLHAT-AELLQVRVQSLTHILALQEEELTR 314
Cdd:TIGR02169 474 LKEEYDRVEKEL--SKLQRELAEAEaQARASEERVRggraveevLKASIQGVHGTvAQLGSVGERYATAIEVAAGNRLNN 551
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 315 KVQPSDSLepefTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKaaeV 394
Cdd:TIGR02169 552 VVVEDDAV----AKEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFGDT---L 624
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 395 EVERMGAKGLQLELSR----AQEARRRWQQQTASAEEQLRLVVNAVSSSqiwlettmAKVEGAAAQLPSLNNRLSYAVRK 470
Cdd:TIGR02169 625 VVEDIEAARRLMGKYRmvtlEGELFEKSGAMTGGSRAPRGGILFSRSEP--------AELQRLRERLEGLKRELSSLQSE 696
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 471 VHTIRGLIARKLALAQLRQEScplpppVTDVSLELQQLREERNRLDAELQLSARLIQqEVGRAREQGEAERQQLSKVAQQ 550
Cdd:TIGR02169 697 LRRIENRLDELSQELSDASRK------IGEIEKEIEQLEQEEEKLKERLEELEEDLS-SLEQEIENVKSELKELEARIEE 769
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 551 LEQELQQTQESLASLglqlevarqgqqesteeAASLRQELTQQQelygQALQEKVAEVETRLREQLSDTERRLNEARREh 630
Cdd:TIGR02169 770 LEEDLHKLEEALNDL-----------------EARLSHSRIPEI----QAELSKLEEEVSRIEARLREIEQKLNRLTLE- 827
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1034650596 631 akavvslRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERD-KNLMLATLQQEGLLSRYKQQR 700
Cdd:TIGR02169 828 -------KEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEElEELEAALRDLESRLGDLKKER 891
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
152-699 |
1.01e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.88 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 152 GAEVVRKNLEEGSQrELEEVQRlhqeQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQ 231
Cdd:pfam15921 72 GKEHIERVLEEYSH-QVKDLQR----RLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQ 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 232 LSKTQEDLEAQVTLVENLRKYVGEQVpsevhsqtwELERQKLLETMQHLQEDRDslhataellqvrvqslthILALQEEE 311
Cdd:pfam15921 147 LQNTVHELEAAKCLKEDMLEDSNTQI---------EQLRKMMLSHEGVLQEIRS------------------ILVDFEEA 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 312 LTRKVQPSDSLEPEFTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQvaslqekvtSQSQEQAILQRSlQDKA 391
Cdd:pfam15921 200 SGKKIYEHDSMSTMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSE---------SQNKIELLLQQH-QDRI 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 392 AEVEVERmgakglQLELSRAQEARRRWQQQTASAEEQLRLVVNAVSSSQIWLETTMAKVEGAAAQLPS--LNNRLSYAVR 469
Cdd:pfam15921 270 EQLISEH------EVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSelREAKRMYEDK 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 470 KVHTIRGLIARKLALAQLRQESCPLPPPVTDVSLELQQLREERNRLDAELQL----SARLIQQEVGRAREQGEAERQQLS 545
Cdd:pfam15921 344 IEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLekeqNKRLWDRDTGNSITIDHLRRELDD 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 546 KVAQQLEQELQQTQESLASLGlQLE---VARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQ--LSDTE 620
Cdd:pfam15921 424 RNMEVQRLEALLKAMKSECQG-QMErqmAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSErtVSDLT 502
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034650596 621 RRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQ 699
Cdd:pfam15921 503 ASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQH 581
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
98-625 |
1.21e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.80 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 98 LQELRRLEEEVRLLRETslqqkmrLEAQAMELEALARAEKAGRAEAEGLRAALAGAeVVRKNLEEGSQRELEEVQRLHQE 177
Cdd:PRK02224 250 REELETLEAEIEDLRET-------IAETEREREELAEEVRDLRERLEELEEERDDL-LAEAGLDDADAEAVEARREELED 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 178 QLSSLTQAHEE---ALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQVTLVENLRKYVG 254
Cdd:PRK02224 322 RDEELRDRLEEcrvAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFG 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 255 EqvpSEVHSQTWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLThilALQEE----ELTRKVQPSDSLEPEFTRKC 330
Cdd:PRK02224 402 D---APVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAE---ALLEAgkcpECGQPVEGSPHVETIEEDRE 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 331 QsllnrwREKVFALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRsLQDKAAEVEVERMGAKGLQlelSR 410
Cdd:PRK02224 476 R------VEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEEL-IAERRETIEEKRERAEELR---ER 545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 411 AQEARRRWQQQTASAEEQlRLVVNAVSSSQIWLETTMAKVEGAAAQLPSLNNRLSYAVRKVHTIRGLIARKLALAQLRQE 490
Cdd:PRK02224 546 AAELEAEAEEKREAAAEA-EEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKREALAELNDE 624
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 491 ScplpppvtdvSLELQQLREERNRLDAELQLSArliqqeVGRAREQGEAERQQLSKVAQQLEQELQQTQESLASLGlqle 570
Cdd:PRK02224 625 R----------RERLAEKRERKRELEAEFDEAR------IEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIG---- 684
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034650596 571 varqGQQESTEEAASLRQELTQQQE-------LYGQA--LQEKVAEVETRLREQLSDT-ERRLNE 625
Cdd:PRK02224 685 ----AVENELEELEELRERREALENrvealeaLYDEAeeLESMYGDLRAELRQRNVETlERMLNE 745
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
166-703 |
1.68e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 45.34 E-value: 1.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 166 RELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQE--DLEAQV 243
Cdd:TIGR00618 190 KSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLlkQLRARI 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 244 TLVENLRKYVGEQVPSEVHSQTWElerqKLLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSLE 323
Cdd:TIGR00618 270 EELRAQEAVLEETQERINRARKAA----PLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRR 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 324 PEFTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRslqdKAAEVEVERMGAKG 403
Cdd:TIGR00618 346 LLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQR----EQATIDTRTSAFRD 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 404 LQLELSRAQearrrwqqqtasAEEQLRLVVNAVSSSQIWLETTMAKVEGAAAQ-LPSLNNRLSYAVRKVHTIRGLIARKL 482
Cdd:TIGR00618 422 LQGQLAHAK------------KQQELQQRYAELCAAAITCTAQCEKLEKIHLQeSAQSLKEREQQLQTKEQIHLQETRKK 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 483 AL-AQLRQESCPLPPPVTDVSLELQQLREERNRLDAELQLSARLIQ--QEVGRAREQGEAERQQLSKVAQQLEQELQQTQ 559
Cdd:TIGR00618 490 AVvLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQtyAQLETSEEDVYHQLTSERKQRASLKEQMQEIQ 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 560 ESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVEtRLREQLSDTERRLNEAR--REHAKAVVSL 637
Cdd:TIGR00618 570 QSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLR-KLQPEQDLQDVRLHLQQcsQELALKLTAL 648
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034650596 638 RQIQRRAAQEKERSQELRRLQEEARK-EEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQRLLT 703
Cdd:TIGR00618 649 HALQLTLTQERVREHALSIRVLPKELlASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEE 715
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
269-625 |
2.57e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 44.66 E-value: 2.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 269 ERQKLLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSLEPEFTRkcqslLNRWREKVFALMVQL 348
Cdd:TIGR02168 699 ALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTE-----LEAEIEELEERLEEA 773
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 349 KAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGLQLELSRAQEARRRWQQQTASAEEQ 428
Cdd:TIGR02168 774 EEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSED 853
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 429 LRLVVNAVSSSQIWLETTMAKVEGAAAQLPSLNNRLSyavrkvhtirgliARKLALAQLRQESCPLPPPVTDVSLELQQL 508
Cdd:TIGR02168 854 IESLAAEIEELEELIEELESELEALLNERASLEEALA-------------LLRSELEELSEELRELESKRSELRRELEEL 920
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 509 REERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQESLASLGLQLEVARQGQQESTEEAASL-- 586
Cdd:TIGR02168 921 REKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELke 1000
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1034650596 587 -RQELTQQQELYGQA---LQEKVAEVETRLREQLSDTERRLNE 625
Cdd:TIGR02168 1001 rYDFLTAQKEDLTEAketLEEAIEEIDREARERFKDTFDQVNE 1043
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
183-723 |
5.74e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.59 E-value: 5.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 183 TQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQlsktqedleAQVTLVENLRKyvGEQVPSEVH 262
Cdd:PTZ00121 1082 DAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKA---------EEARKAEDARK--AEEARKAED 1150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 263 SQTWELERQklLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSLEPEftRKCQSLLNRWREKVF 342
Cdd:PTZ00121 1151 AKRVEIARK--AEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEE--RKAEEARKAEDAKKA 1226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 343 -----ALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGLQL----------E 407
Cdd:PTZ00121 1227 eavkkAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAkkaeekkkadE 1306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 408 LSRAQEARRRWQQQTASAEEQLRLVVNAVSSSqiwlETTMAKVEGAAAQLPSLNNRLSYAVRKVHtirgliARKLALAQL 487
Cdd:PTZ00121 1307 AKKKAEEAKKADEAKKKAEEAKKKADAAKKKA----EEAKKAAEAAKAEAEAAADEAEAAEEKAE------AAEKKKEEA 1376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 488 RQESCPLPPPVTDV--SLELQQLREERNRLDAELQLSARLiQQEVGRAREQGEAERQ--QLSKVAQQLEQELQQTQESLA 563
Cdd:PTZ00121 1377 KKKADAAKKKAEEKkkADEAKKKAEEDKKKADELKKAAAA-KKKADEAKKKAEEKKKadEAKKKAEEAKKADEAKKKAEE 1455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 564 SLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQL---SDTERRLNEARR--EHAKAVVSLR 638
Cdd:PTZ00121 1456 AKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAkkkADEAKKAEEAKKadEAKKAEEAKK 1535
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 639 QIQRRAAQEKERSQELRRlQEEARKEEGQRLARRLQELERDKNLmlaTLQQEGLLSRYKQQRLLTVLPSLLDKKKSVVSS 718
Cdd:PTZ00121 1536 ADEAKKAEEKKKADELKK-AEELKKAEEKKKAEEAKKAEEDKNM---ALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEE 1611
|
....*
gi 1034650596 719 PRPPE 723
Cdd:PTZ00121 1612 AKKAE 1616
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
85-243 |
6.23e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.40 E-value: 6.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 85 QALSQQAEVIVRQLQELRRLEEE----VRLLRETSLQQKMRLEAQAMELEALARAEkagrAEAEGLRAALAGAEVVRKNL 160
Cdd:COG3096 508 QALAQRLQQLRAQLAELEQRLRQqqnaERLLEEFCQRIGQQLDAAEELEELLAELE----AQLEELEEQAAEAVEQRSEL 583
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 161 eegsQRELEEVQRLHQEqLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAkELAEAQREAELLRKQLSKTQEDLE 240
Cdd:COG3096 584 ----RQQLEQLRARIKE-LAARAPAWLAAQDALERLREQSGEALADSQEVTAAMQ-QLLEREREATVERDELAARKQALE 657
|
...
gi 1034650596 241 AQV 243
Cdd:COG3096 658 SQI 660
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
190-701 |
7.33e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.83 E-value: 7.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 190 LSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQVTLVENLRKYVgEQVPSEVHSQTWELE 269
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAEL-EELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 270 RQKLLETMQHLQEDRDSLHATAELLQVRVQSLTHiLALQEEELTRKVQpsdslepeftrkcqsllnRWREKVFALMVQLK 349
Cdd:COG4717 127 LLPLYQELEALEAELAELPERLEELEERLEELRE-LEEELEELEAELA------------------ELQEELEELLEQLS 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 350 AQELEHsdsVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEvermgakGLQLELSRAQEARRRWQQQTASAEEQL 429
Cdd:COG4717 188 LATEEE---LQDLAEELEELQQRLAELEEELEEAQEELEELEEELE-------QLENELEAAALEERLKEARLLLLIAAA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 430 RLVVNAVSSSQIWLETTMAKVEGAAAQLPSLnnRLSYAVRKVHTIRGLIARKLALAQLRqescplpppvtdvSLELQQLR 509
Cdd:COG4717 258 LLALLGLGGSLLSLILTIAGVLFLVLGLLAL--LFLLLAREKASLGKEAEELQALPALE-------------ELEEEELE 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 510 EERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQESL-ASLGLQLEVARQGQQESTEEAASLRQ 588
Cdd:COG4717 323 ELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALlAEAGVEDEEELRAALEQAEEYQELKE 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 589 ELTQQQELYGQALQEKVAEVETRLREQLSDTERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEeaRKEEGQR 668
Cdd:COG4717 403 ELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAE--LLQELEE 480
|
490 500 510
....*....|....*....|....*....|....*.
gi 1034650596 669 LARRLQELERD---KNLMLATLQQegLLSRYKQQRL 701
Cdd:COG4717 481 LKAELRELAEEwaaLKLALELLEE--AREEYREERL 514
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
100-273 |
1.07e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 42.74 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 100 ELRRLEEEVRLLREtslqQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLEEGSQ------RELEEVQR 173
Cdd:PRK03918 215 ELPELREELEKLEK----EVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEeleekvKELKELKE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 174 LHQE---------QLSSLTQAHEEALSSLTSKAEGLEKSLSSLET--RRAGE-AKELAEAQREAELLRKQLsKTQEDLEA 241
Cdd:PRK03918 291 KAEEyiklsefyeEYLDELREIEKRLSRLEEEINGIEERIKELEEkeERLEElKKKLKELEKRLEELEERH-ELYEEAKA 369
|
170 180 190
....*....|....*....|....*....|..
gi 1034650596 242 QVTLVENLRKYVGEQVPSEVHSQTWELERQKL 273
Cdd:PRK03918 370 KKEELERLKKRLTGLTPEKLEKELEELEKAKE 401
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
108-259 |
1.27e-03 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 41.57 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 108 VRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLEEgSQRELEEVQRLHQEQLSSLTQAhE 187
Cdd:COG1566 74 ARLDPTDLQAALAQAEAQLAAAEAQLARLEAELGAEAEIAAAEAQLAAAQAQLDL-AQRELERYQALYKKGAVSQQEL-D 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 188 EALSSLTSKAEGLEKSLSSLETRRAG--EAKELAEAQREAELLRKQLSKTQEDLE-AQVT-----LVENLRKYVGEQVPS 259
Cdd:COG1566 152 EARAALDAAQAQLEAAQAQLAQAQAGlrEEEELAAAQAQVAQAEAALAQAELNLArTTIRapvdgVVTNLNVEPGEVVSA 231
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
184-717 |
1.42e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 42.13 E-value: 1.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 184 QAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQVtlveNLRKYVGEQVPSEVHS 263
Cdd:pfam12128 247 QQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDEL----NGELSAADAAVAKDRS 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 264 QTWELERQKLletmQHLQEDRDSLHATAELL---QVRVQSLTHILALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREK 340
Cdd:pfam12128 323 ELEALEDQHG----AFLDADIETAAADQEQLpswQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDK 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 341 vfaLMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQdkaaevevermgakglqlelSRAQEARRRWQQ 420
Cdd:pfam12128 399 ---LAKIREARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLK--------------------SRLGELKLRLNQ 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 421 QTASAEE--QLRLVVNAVSSSQIWLETTMAKVEGAAAQLPSLNNRLSYAVRKVHTI-RGLIARKLALAQLRQescplppp 497
Cdd:pfam12128 456 ATATPELllQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQAsRRLEERQSALDELEL-------- 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 498 vtdvslelqQLREERNRLDAELQLSARLIQQEVGRAreqgeAERQQLSKVAQQLEQELQQTQESLASLGLQLEVARQGQQ 577
Cdd:pfam12128 528 ---------QLFPQAGTLLHFLRKEAPDWEQSIGKV-----ISPELLHRTDLDPEVWDGSVGGELNLYGVKLDLKRIDVP 593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 578 ESTEEAASLRQELTQQQELYgQALQEKVAEVETRL---REQLSDTERRLNEARREHAKAVVSLRQIQRRAAQEKERSQEL 654
Cdd:pfam12128 594 EWAASEEELRERLDKAEEAL-QSAREKQAAAEEQLvqaNGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKA 672
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034650596 655 RRLQEEARKEEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQRLLTVLPSLLDKKKSVVS 717
Cdd:pfam12128 673 LAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEGALDAQLALLK 735
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
85-705 |
1.76e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 41.88 E-value: 1.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 85 QALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKagRAEAEGLRAALAGAEVVRKNLEEGS 164
Cdd:pfam02463 213 YQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEE--KLAQVLKENKEEEKEKKLQEEELKL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 165 QRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQVT 244
Cdd:pfam02463 291 LAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQ 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 245 LVENLRKYVGE--QVPSEVHSQTWELERQKLLET------MQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKV 316
Cdd:pfam02463 371 LEEELLAKKKLesERLSSAAKLKEEELELKSEEEkeaqllLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEK 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 317 QPSDSLEPEFTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQ-------------------LKGQVASLQEKVTSQS 377
Cdd:pfam02463 451 EELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLeersqkeskarsglkvllaLIKDGVGGRIISAHGR 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 378 QEQAILQRSLQDKAAEVEVERMGAKGLQLELSRAQEARRRWQQQTASAEEQLRLVVNAVSSSQIWLETTMAKVEGAAAQL 457
Cdd:pfam02463 531 LGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDK 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 458 PSLNNRLSYAVRKV-------HTIRGLIARKLALAQLRQESCPLPPPVTDVSLELQQLREERNRLDAELQLSARLIQQEv 530
Cdd:pfam02463 611 ATLEADEDDKRAKVvegilkdTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESEL- 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 531 grarEQGEAERQQLSKVAQQLEQELQQTQESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVET 610
Cdd:pfam02463 690 ----AKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEE 765
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 611 RLREQLSDTERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERDKNLMLATLQQE 690
Cdd:pfam02463 766 KSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEE 845
|
650
....*....|....*
gi 1034650596 691 GLLSRYKQQRLLTVL 705
Cdd:pfam02463 846 QKLEKLAEEELERLE 860
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
76-257 |
1.79e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 41.74 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 76 GRSWGLEGSQALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALaraekagRAEAEGLRaalagaev 155
Cdd:PRK00409 486 GKSNAFEIAKRLGLPENIIEEAKKLIGEDKEKLNELIASLEELERELEQKAEEAEAL-------LKEAEKLK-------- 550
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 156 vrKNLEEgsqrELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLE--TRRAGEAKELAEAQREaelLRKQLS 233
Cdd:PRK00409 551 --EELEE----KKEKLQEEEDKLLEEAEKEAQQAIKEAKKEADEIIKELRQLQkgGYASVKAHELIEARKR---LNKANE 621
|
170 180
....*....|....*....|....
gi 1034650596 234 KTQEDLEAQVTLVENLRkyVGEQV 257
Cdd:PRK00409 622 KKEKKKKKQKEKQEELK--VGDEV 643
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
85-395 |
2.04e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.59 E-value: 2.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 85 QALSQQAEVIVRQLQELRRLEEEVRLLREtslQQKMRLEAQAMELEALA-RAEKAGRAEAEGLRAALAGAEVVRKNLEeG 163
Cdd:TIGR02169 233 EALERQKEAIERQLASLEEELEKLTEEIS---ELEKRLEEIEQLLEELNkKIKDLGEEEQLRVKEKIGELEAEIASLE-R 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 164 SQRELEEVQRLHQEQLSSLtqahEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLsktqEDLEAQv 243
Cdd:TIGR02169 309 SIAEKERELEDAEERLAKL----EAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAEL----EEVDKE- 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 244 tlvenlrkyvgeqvpsevhSQTWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSLE 323
Cdd:TIGR02169 380 -------------------FAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELE 440
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034650596 324 PEFTrkcqsllnrwrekvfALMVQLKAQELEhsdsVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVE 395
Cdd:TIGR02169 441 EEKE---------------DKALEIKKQEWK----LEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELA 493
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
419-651 |
2.56e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 2.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 419 QQQTASAEEQLRLVVNAVSSSQIWLETTMAKVEGAAAQLPSLNNRLSYAVRKVHTIRGLIARKLA-LAQLRQEscplppp 497
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAeLAELEKE------- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 498 VTDVSLELQQLREERNRLDAELQLSARLIQQEVG-RAREQGEAER--QQLSKVAQQLEQELQQTQESLAslglQLEVARQ 574
Cdd:COG4942 92 IAELRAELEAQKEELAELLRALYRLGRQPPLALLlSPEDFLDAVRrlQYLKYLAPARREQAEELRADLA----ELAALRA 167
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034650596 575 GQQESTEEAASLRQELTQQQELYGQALQEKvAEVETRLREQLSDTERRLNEARREHAKAVVSLRQIQRRAAQEKERS 651
Cdd:COG4942 168 ELEAERAELEALLAELEEERAALEALKAER-QKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
504-701 |
3.40e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.77 E-value: 3.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 504 ELQQLREERNRLDAELQLSARLIQ-QEVGRAREQGEAERQQLSKVAQQLEQELQQTQESLASLGLQLEVARQGQQESTee 582
Cdd:COG3206 197 ALEEFRQKNGLVDLSEEAKLLLQQlSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAE-- 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 583 aasLRQELTQQQELYG------QALQEKVAEVETRLREQLsdtERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRR 656
Cdd:COG3206 275 ---LEAELAELSARYTpnhpdvIALRAQIAALRAQLQQEA---QRILASLEAELEALQAREASLQAQLAQLEARLAELPE 348
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1034650596 657 LQeearkeegqrlaRRLQELERDKNLMLATLQQegLLSRYKQQRL 701
Cdd:COG3206 349 LE------------AELRRLEREVEVARELYES--LLQRLEEARL 379
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
85-251 |
4.16e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 4.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 85 QALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARA-EKAGRAE-------AEGLRAALAGAEVV 156
Cdd:COG4942 62 RRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRAlYRLGRQPplalllsPEDFLDAVRRLQYL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 157 RKNLEEgsQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQ 236
Cdd:COG4942 142 KYLAPA--RREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQ 219
|
170
....*....|....*
gi 1034650596 237 EDLEAQVTLVENLRK 251
Cdd:COG4942 220 QEAEELEALIARLEA 234
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
268-535 |
4.78e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.67 E-value: 4.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 268 LERQKLLETMQHLQEDRDSL---HATAELLQVRVQSLTHILALQEEELTRKVQPSDslepefTRKCQSLLNRWREkvfAL 344
Cdd:COG4913 218 LEEPDTFEAADALVEHFDDLeraHEALEDAREQIELLEPIRELAERYAAARERLAE------LEYLRAALRLWFA---QR 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 345 MVQLKAQELEhsdsvkQLKGQVASLQEKVTSQSQEQAILQRSLQdkaaEVEVERMGAKG-----LQLELSRAQEARRRWQ 419
Cdd:COG4913 289 RLELLEAELE------ELRAELARLEAELERLEARLDALREELD----ELEAQIRGNGGdrleqLEREIERLERELEERE 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 420 QQTASAEEQLR-LVVNAVSSSQIWLETtmakVEGAAAQLPSLNNRLSYAVRKVHTIRGliarklALAQLRQEscplpppV 498
Cdd:COG4913 359 RRRARLEALLAaLGLPLPASAEEFAAL----RAEAAALLEALEEELEALEEALAEAEA------ALRDLRRE-------L 421
|
250 260 270
....*....|....*....|....*....|....*..
gi 1034650596 499 TDVSLELQQLREERNRLDAELQLSARLIQQEVGRARE 535
Cdd:COG4913 422 RELEAEIASLERRKSNIPARLLALRDALAEALGLDEA 458
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
494-690 |
5.08e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 5.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 494 LPPPVTDVSLELQQLREERNRLDAELQLSARLIQQEvgrareqgEAERQQLSKVAQQLEQELQQTQESLASLGLQLEVAR 573
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAAL--------KKEEKALLKQLAALERRIAALARRIRALEQELAALE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 574 QGQQESTEEAASLRQELTQQQELYGQAL-----QEKVAEVETRLR-EQLSDTERRL------NEARREHAKAVVS-LRQI 640
Cdd:COG4942 83 AELAELEKEIAELRAELEAQKEELAELLralyrLGRQPPLALLLSpEDFLDAVRRLqylkylAPARREQAEELRAdLAEL 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1034650596 641 QRRAAQEKERSQELRRLQEEARKEEgqrlaRRLQELERDKNLMLATLQQE 690
Cdd:COG4942 163 AALRAELEAERAELEALLAELEEER-----AALEALKAERQKLLARLEKE 207
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
160-688 |
5.88e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 40.10 E-value: 5.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 160 LEEGSQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETrrageakELAEAQREAELLRKQLSKTQEDL 239
Cdd:pfam15921 250 LKSESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQS-------QLEIIQEQARNQNSMYMRQLSDL 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 240 EAQVTLVENLRKYVGEQVPSEVHsqtwELERQKLLET--MQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQ 317
Cdd:pfam15921 323 ESTVSQLRSELREAKRMYEDKIE----ELEKQLVLANseLTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKE 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 318 PSDSLEPEFTRKCQSLLNRWRE------KVFALMVQLKAQElehSDSVKQLKGQVASLQ------EKVTSQSQEQAILQR 385
Cdd:pfam15921 399 QNKRLWDRDTGNSITIDHLRRElddrnmEVQRLEALLKAMK---SECQGQMERQMAAIQgkneslEKVSSLTAQLESTKE 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 386 SLQDKAAEVEVERMGAKGLQL---ELSRAQEARRRWQQQTASAEEQLRLVVNAVSSSQIWLETTMAKVEGAAAQLPSLNN 462
Cdd:pfam15921 476 MLRKVVEELTAKKMTLESSERtvsDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKL 555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 463 RLSYAVRKVHTIRGLIARKLAL--------AQLRQESCPLPPPVTDVSLELQQLREERNRLDAEL-QLSARLIQQEVgra 533
Cdd:pfam15921 556 QMAEKDKVIEILRQQIENMTQLvgqhgrtaGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIrELEARVSDLEL--- 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 534 reqgeaERQQLSKVAQQLEQELQQTQESLASLGLQLEVARQGQQESTEEAASLRQEL---TQQQELYGQALQEKVAEVET 610
Cdd:pfam15921 633 ------EKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFrnkSEEMETTTNKLKMQLKSAQS 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 611 RLrEQLSDTERRLNEARREHAKAVVSL-RQIQRRAAQEKERSQELRRLQEEAR---------KEEGQRLARRLQELERDK 680
Cdd:pfam15921 707 EL-EQTRNTLKSMEGSDGHAMKVAMGMqKQITAKRGQIDALQSKIQFLEEAMTnankekhflKEEKNKLSQELSTVATEK 785
|
....*...
gi 1034650596 681 NLMLATLQ 688
Cdd:pfam15921 786 NKMAGELE 793
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
85-664 |
6.19e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 40.34 E-value: 6.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 85 QALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELE-ALARAEKAGRAEAEGLRAALAGAEVVRKNLEEG 163
Cdd:TIGR00618 233 EALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVlEETQERINRARKAAPLAAHIKAVTQIEQQAQRI 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 164 SQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQV 243
Cdd:TIGR00618 313 HTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLT 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 244 TLvENLRKYVGEQVPSEVHSQTWELERQKLLE-TMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSL 322
Cdd:TIGR00618 393 QK-LQSLCKELDILQREQATIDTRTSAFRDLQgQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKER 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 323 EPEFTRKCQSLLNRWREKVFALMVQLKAQELE--------HSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEV 394
Cdd:TIGR00618 472 EQQLQTKEQIHLQETRKKAVVLARLLELQEEPcplcgsciHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQL 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 395 EVERMGAKGLQLELSRAQEARRRWQQQTASAEEQLRLVVNAVSSSQIWLEttmaKVEGAAAQLPSLNNRLsyaVRKVHTI 474
Cdd:TIGR00618 552 TSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTE----KLSEAEDMLACEQHAL---LRKLQPE 624
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 475 RGLIARKLALAQLRQESCPLPPPVTDVSLELQQLREErnrldaELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQE 554
Cdd:TIGR00618 625 QDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVR------EHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEM 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 555 LQQTQESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDTERRLNEARRE---HA 631
Cdd:TIGR00618 699 LAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAAlqtGA 778
|
570 580 590
....*....|....*....|....*....|...
gi 1034650596 632 KAVVSLRQIQRRAAQEKERSQELRRLQEEARKE 664
Cdd:TIGR00618 779 ELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQE 811
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
569-701 |
6.83e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 40.04 E-value: 6.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 569 LEVARQGQQE---STEEAASLRQeLTQQQELYGQALqekvAEVETRLREQLSdTERRLNEARREHAKAVVSLRQIQRRAA 645
Cdd:PRK10929 119 LEKSRQAQQEqdrAREISDSLSQ-LPQQQTEARRQL----NEIERRLQTLGT-PNTPLAQAQLTALQAESAALKALVDEL 192
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 646 QEKERS----QELRRLQEEARKEEGQRLARRLQELerdKNLMLATLQQEGLLSRYKQQRL 701
Cdd:PRK10929 193 ELAQLSannrQELARLRSELAKKRSQQLDAYLQAL---RNQLNSQRQREAERALESTELL 249
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
101-429 |
6.93e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 40.16 E-value: 6.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 101 LRRLEEEVrlLRETSLQQKMR-LEAQAMELEALARAEKAGRAEAEGLRAALAGA-EVVRKNLEEG-----------SQRE 167
Cdd:pfam01576 249 LARLEEET--AQKNNALKKIReLEAQISELQEDLESERAARNKAEKQRRDLGEElEALKTELEDTldttaaqqelrSKRE 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 168 ---------LEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLrkQLSKTQed 238
Cdd:pfam01576 327 qevtelkkaLEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTL--QQAKQD-- 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 239 leaqvtlVENLRKYVGEQVpSEVHSQTWELERQKlletmqhlQEDRDSLHAtaelLQVRVQSLTHILALQEEELTRKVQP 318
Cdd:pfam01576 403 -------SEHKRKKLEGQL-QELQARLSESERQR--------AELAEKLSK----LQSELESVSSLLNEAEGKNIKLSKD 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 319 SDSLEPEFtRKCQSLLNrwrekvfalmvQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVER 398
Cdd:pfam01576 463 VSSLESQL-QDTQELLQ-----------EETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMK 530
|
330 340 350
....*....|....*....|....*....|.
gi 1034650596 399 MGAKGLQLELSRAQEARRRWQQQTASAEEQL 429
Cdd:pfam01576 531 KKLEEDAGTLEALEEGKKRLQRELEALTQQL 561
|
|
| PRK12705 |
PRK12705 |
hypothetical protein; Provisional |
565-715 |
8.36e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 237178 [Multi-domain] Cd Length: 508 Bit Score: 39.31 E-value: 8.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 565 LGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLsdterrLNEARREHAKAVVSLRQIQRRA 644
Cdd:PRK12705 17 LLGVLVVLLKKRQRLAKEAERILQEAQKEAEEKLEAALLEAKELLLRERNQQ------RQEARREREELQREEERLVQKE 90
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034650596 645 AQEKERSQELrRLQEEARKEEGQRLARRLQEL-ERDKNLMLATLQQEGLLSRYKQQRLLTVLPSLLDKKKSV 715
Cdd:PRK12705 91 EQLDARAEKL-DNLENQLEEREKALSARELELeELEKQLDNELYRVAGLTPEQARKLLLKLLDAELEEEKAQ 161
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
569-665 |
8.65e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 39.42 E-value: 8.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 569 LEVARQGQQESTEEAASLRQELTQQQElygqALQEKVAEVETRLREQLSDTERR----LNEARREHAKAVVSLRQIQR-- 642
Cdd:PRK00409 525 LEELERELEQKAEEAEALLKEAEKLKE----ELEEKKEKLQEEEDKLLEEAEKEaqqaIKEAKKEADEIIKELRQLQKgg 600
|
90 100
....*....|....*....|....
gi 1034650596 643 -RAAQEKERSQELRRLQEEARKEE 665
Cdd:PRK00409 601 yASVKAHELIEARKRLNKANEKKE 624
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
150-381 |
8.85e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.36 E-value: 8.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 150 LAGAEVVRKNLEEGSQRELEEVQRLHQEQLSSLTQAHEEA------LSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQR 223
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEkallkqLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 224 EAELLRKQLSKTQEDLEAQVTlveNLRKYVGEQVPSEVHSQTWELERQKLLETMQHLQEDRDSLhatAELLQVRVQSLTH 303
Cdd:COG4942 91 EIAELRAELEAQKEELAELLR---ALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQ---AEELRADLAELAA 164
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034650596 304 ILALQEEELTRKVQPSDSLEPEftrkcQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQA 381
Cdd:COG4942 165 LRAELEAERAELEALLAELEEE-----RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
506-700 |
9.04e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 39.51 E-value: 9.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 506 QQLREERNRLDAELQLSArlIQQEVGRAREQGEAERQQLSKVAQQLEQELqqtqesLASLGLQLEVARQGQQESTEEAAS 585
Cdd:COG4913 242 EALEDAREQIELLEPIRE--LAERYAAARERLAELEYLRAALRLWFAQRR------LELLEAELEELRAELARLEAELER 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 586 LRQELTQQQE----LYGQALQEKVAEVEtRLREQLSDTERRLNEARREHAKAVVSLRQI--------------QRRAAQE 647
Cdd:COG4913 314 LEARLDALREeldeLEAQIRGNGGDRLE-QLEREIERLERELEERERRRARLEALLAALglplpasaeefaalRAEAAAL 392
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1034650596 648 KERSQELRRLQEEARkeegQRLARRLQELERDknlmLATLQQEglLSRYKQQR 700
Cdd:COG4913 393 LEALEEELEALEEAL----AEAEAALRDLRRE----LRELEAE--IASLERRK 435
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
495-618 |
9.40e-03 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 39.55 E-value: 9.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 495 PPPvtDVSLELQQLREERNRLDAELQLSARLIQQEVGRArEQGEAERQQLSKVAQQLEQELQQTQESLASLglqlevarq 574
Cdd:PRK11448 136 PPE--DPENLLHALQQEVLTLKQQLELQAREKAQSQALA-EAQQQELVALEGLAAELEEKQQELEAQLEQL--------- 203
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1034650596 575 gQQESTEEAASLRQELTQQQELYGQALQekVAEVETRL--REQLSD 618
Cdd:PRK11448 204 -QEKAAETSQERKQKRKEITDQAAKRLE--LSEEETRIliDQQLRK 246
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
189-439 |
9.49e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 38.98 E-value: 9.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 189 ALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQVTLVENLRKYVGEQvpsevhsqtwel 268
Cdd:COG4942 14 AAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAAL------------ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 269 eRQKLLETMQHLQEDRDSLHATAELLQVRVQSLthILALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKvfaLMVQL 348
Cdd:COG4942 82 -EAELAELEKEIAELRAELEAQKEELAELLRAL--YRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARRE---QAEEL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034650596 349 KAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGLQLELSRAQEARRRWQQQTASAEEQ 428
Cdd:COG4942 156 RADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
250
....*....|.
gi 1034650596 429 LRLVVNAVSSS 439
Cdd:COG4942 236 AAAAAERTPAA 246
|
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