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Conserved domains on  [gi|1034620034|ref|XP_016883089|]
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mitochondrial import receptor subunit TOM34 isoform X2 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
3a0801s09 super family cl36792
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ...
 12-116 2.91e-16

mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00990:

Pssm-ID: 273380 [Multi-domain]  Cd Length: 615  Bit Score: 75.79  E-value: 2.91e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034  12 LRAAGNESFRNGQYAEASALYGRALRVlqaqgssdpEEESVLYSNRAACHLKDGNCRDCIKDCTSALALVPFSIKPLLRR 91
Cdd:TIGR00990 130 LKEKGNKAYRNKDFNKAIKLYSKAIEC---------KPDPVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRR 200

                          90       100
                  ....*....|....*....|....*
gi 1034620034  92 ASAYEALEKYPMAYVDYKTVLQIDD 116
Cdd:TIGR00990 201 ANAYDGLGKYADALLDLTASCIIDG 225
 
Name Accession Description Interval E-value
3a0801s09 TIGR00990
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ...
 12-116 2.91e-16

mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273380 [Multi-domain]  Cd Length: 615  Bit Score: 75.79  E-value: 2.91e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034  12 LRAAGNESFRNGQYAEASALYGRALRVlqaqgssdpEEESVLYSNRAACHLKDGNCRDCIKDCTSALALVPFSIKPLLRR 91
Cdd:TIGR00990 130 LKEKGNKAYRNKDFNKAIKLYSKAIEC---------KPDPVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRR 200

                          90       100
                  ....*....|....*....|....*
gi 1034620034  92 ASAYEALEKYPMAYVDYKTVLQIDD 116
Cdd:TIGR00990 201 ANAYDGLGKYADALLDLTASCIIDG 225
NlpI COG4785
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
2-117 1.15e-09

Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443815 [Multi-domain]  Cd Length: 223  Bit Score: 55.69  E-value: 1.15e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034   2 APKFPDSVEELRAAGNESFRNGQYAEASALYGRALRVlqaqgssDPEEeSVLYSNRAACHLKDGNCRDCIKDCTSALALV 81
Cdd:COG4785    66 ALALPDLAQLYYERGVAYDSLGDYDLAIADFDQALEL-------DPDL-AEAYNNRGLAYLLLGDYDAALEDFDRALELD 137

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1034620034  82 PFSIKPLLRRASAYEALEKYPMAYVDYKTVLQIDDN 117
Cdd:COG4785   138 PDYAYAYLNRGIALYYLGRYELAIADLEKALELDPN 173
PLN03088 PLN03088
SGT1, suppressor of G2 allele of SKP1; Provisional
 11-104 2.18e-05

SGT1, suppressor of G2 allele of SKP1; Provisional


Pssm-ID: 215568 [Multi-domain]  Cd Length: 356  Bit Score: 44.01  E-value: 2.18e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034  11 ELRAAGNESFRNGQYAEASALYGRALrvlqAQGSSDPEeesvLYSNRAACHLKDGNCRDCIKDCTSALALVPFSIKPLLR 90
Cdd:PLN03088    4 DLEDKAKEAFVDDDFALAVDLYTQAI----DLDPNNAE----LYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLR 75

                          90
                  ....*....|....
gi 1034620034  91 RASAYEALEKYPMA 104
Cdd:PLN03088   76 KGTACMKLEEYQTA 89
DUF4919 pfam16266
Domain of unknown function (DUF4919); This family consists of uncharacterized proteins around ...
 44-101 8.97e-03

Domain of unknown function (DUF4919); This family consists of uncharacterized proteins around 230 residues in length and is mainly found in various Bacteroides and Prevotella species. The function of this family is unknown.


Pssm-ID: 406631  Cd Length: 184  Bit Score: 35.35  E-value: 8.97e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1034620034  44 SSDPEEESVLYSNraaCHLKDGNCRDCIKDCTSALALVPFSIKPLLRRASAYEALEKY 101
Cdd:pfam16266  52 SPDEDKLDVLYDK---KLPSEEECKEIISLAEEALDDNPFDLRQLNFLAYAYGLLGDE 106
 
Name Accession Description Interval E-value
3a0801s09 TIGR00990
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ...
 12-116 2.91e-16

mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273380 [Multi-domain]  Cd Length: 615  Bit Score: 75.79  E-value: 2.91e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034  12 LRAAGNESFRNGQYAEASALYGRALRVlqaqgssdpEEESVLYSNRAACHLKDGNCRDCIKDCTSALALVPFSIKPLLRR 91
Cdd:TIGR00990 130 LKEKGNKAYRNKDFNKAIKLYSKAIEC---------KPDPVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRR 200

                          90       100
                  ....*....|....*....|....*
gi 1034620034  92 ASAYEALEKYPMAYVDYKTVLQIDD 116
Cdd:TIGR00990 201 ANAYDGLGKYADALLDLTASCIIDG 225
NlpI COG4785
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
2-117 1.15e-09

Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443815 [Multi-domain]  Cd Length: 223  Bit Score: 55.69  E-value: 1.15e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034   2 APKFPDSVEELRAAGNESFRNGQYAEASALYGRALRVlqaqgssDPEEeSVLYSNRAACHLKDGNCRDCIKDCTSALALV 81
Cdd:COG4785    66 ALALPDLAQLYYERGVAYDSLGDYDLAIADFDQALEL-------DPDL-AEAYNNRGLAYLLLGDYDAALEDFDRALELD 137

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1034620034  82 PFSIKPLLRRASAYEALEKYPMAYVDYKTVLQIDDN 117
Cdd:COG4785   138 PDYAYAYLNRGIALYYLGRYELAIADLEKALELDPN 173
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
6-121 2.13e-09

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 55.01  E-value: 2.13e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034   6 PDSVEELRAAGNESFRNGQYAEASALYGRALRVlqaqgssDPEEESVLYsNRAACHLKDGNCRDCIKDCTSALALVPFSI 85
Cdd:COG0457     5 PDDAEAYNNLGLAYRRLGRYEEAIEDYEKALEL-------DPDDAEALY-NLGLAYLRLGRYEEALADYEQALELDPDDA 76

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1034620034  86 KPLLRRASAYEALEKYPMAYVDYKTVLQIDDNVTSA 121
Cdd:COG0457    77 EALNNLGLALQALGRYEEALEDYDKALELDPDDAEA 112
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
6-134 8.31e-08

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 50.78  E-value: 8.31e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034   6 PDSVEELRAAGNESFRNGQYAEASALYGRALRVlqaqgssDPEEESVLYsNRAACHLKDGNCRDCIKDCTSALALVPFSI 85
Cdd:COG0457    39 PDDAEALYNLGLAYLRLGRYEEALADYEQALEL-------DPDDAEALN-NLGLALQALGRYEEALEDYDKALELDPDDA 110

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1034620034  86 KPLLRRASAYEALEKYPMAYVDYKTVLQIDDNVTSAVEGINRMTRALMD 134
Cdd:COG0457   111 EALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGR 159
NrfG COG4235
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ...
 6-127 1.76e-06

Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443378 [Multi-domain]  Cd Length: 131  Bit Score: 45.38  E-value: 1.76e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034   6 PDSVEELRAAGNESFRNGQYAEASALYGRALRVlqaqgssDPEEESVLYsNRAACHLKDGNCRDCIKDCTSALALVPFSI 85
Cdd:COG4235    14 PNDAEGWLLLGRAYLRLGRYDEALAAYEKALRL-------DPDNADALL-DLAEALLAAGDTEEAEELLERALALDPDNP 85

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1034620034  86 KPLLRRASAYEALEKYPMAYVDYKTVLQI---DDNVTSAVEGINR 127
Cdd:COG4235    86 EALYLLGLAAFQQGDYAEAIAAWQKLLALlpaDAPARLLEASIAE 130
BepA COG4783
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ...
 6-115 1.39e-05

Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443813 [Multi-domain]  Cd Length: 139  Bit Score: 42.87  E-value: 1.39e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034   6 PDSVEELRAAGNESFRNGQYAEASALYGRALRVlqaqgssDPEEeSVLYSNRAACHLKDGNCRDCIKDCTSALALVPFSI 85
Cdd:COG4783    35 PDNPEAFALLGEILLQLGDLDEAIVLLHEALEL-------DPDE-PEARLNLGLALLKAGDYDEALALLEKALKLDPEHP 106

                          90       100       110
                  ....*....|....*....|....*....|
gi 1034620034  86 KPLLRRASAYEALEKYPMAYVDYKTVLQID 115
Cdd:COG4783   107 EAYLRLARAYRALGRPDEAIAALEKALELD 136
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 10-135 1.88e-05

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 44.21  E-value: 1.88e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034  10 EELRAAGNESFRNGQYAEASALYGRALRVlqaqgssDPEEESVLYsNRAACHLKDGNCRDCIKDCTSALALVPFSIKPLL 89
Cdd:COG3914    79 ALLELAALLLQALGRYEEALALYRRALAL-------NPDNAEALF-NLGNLLLALGRLEEALAALRRALALNPDFAEAYL 150

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1034620034  90 RRASAYEALEKYPMAYVDYKTVLQIDDNVTSAvegINRMTRALMDS 135
Cdd:COG3914   151 NLGEALRRLGRLEEAIAALRRALELDPDNAEA---LNNLGNALQDL 193
PLN03088 PLN03088
SGT1, suppressor of G2 allele of SKP1; Provisional
 11-104 2.18e-05

SGT1, suppressor of G2 allele of SKP1; Provisional


Pssm-ID: 215568 [Multi-domain]  Cd Length: 356  Bit Score: 44.01  E-value: 2.18e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034  11 ELRAAGNESFRNGQYAEASALYGRALrvlqAQGSSDPEeesvLYSNRAACHLKDGNCRDCIKDCTSALALVPFSIKPLLR 90
Cdd:PLN03088    4 DLEDKAKEAFVDDDFALAVDLYTQAI----DLDPNNAE----LYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLR 75

                          90
                  ....*....|....
gi 1034620034  91 RASAYEALEKYPMA 104
Cdd:PLN03088   76 KGTACMKLEEYQTA 89
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 6-115 7.68e-05

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 42.29  E-value: 7.68e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034   6 PDSVEELRAAGNESFRNGQYAEASALYGRALRVlqaqgssDPEEESVlYSNRAACHLKDGNCRDCIKDCTSALALVPFSI 85
Cdd:COG3914   109 PDNAEALFNLGNLLLALGRLEEALAALRRALAL-------NPDFAEA-YLNLGEALRRLGRLEEAIAALRRALELDPDNA 180

                          90       100       110
                  ....*....|....*....|....*....|
gi 1034620034  86 KPLLRRASAYEALEKYPMAYVDYKTVLQID 115
Cdd:COG3914   181 EALNNLGNALQDLGRLEEAIAAYRRALELD 210
TadD COG5010
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ...
 20-115 1.46e-04

Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 444034 [Multi-domain]  Cd Length: 155  Bit Score: 40.33  E-value: 1.46e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034  20 FRNGQYAEASALYGRALRVlqaqgssDPEEESVLYsNRAACHLKDGNCRDCIKDCTSALALVPFSIKPLLRRASAYEALE 99
Cdd:COG5010    65 NKLGDFEESLALLEQALQL-------DPNNPELYY-NLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLG 136

                          90
                  ....*....|....*.
gi 1034620034 100 KYPMAYVDYKTVLQID 115
Cdd:COG5010   137 QDDEAKAALQRALGTS 152
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
6-117 1.58e-04

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 41.15  E-value: 1.58e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034   6 PDSVEELRAAGNESFRNGQYAEASALYGRALRVlqaqgssDPEEESVLYsNRAACHLKDGNCRDCIKDCTSALALVPFSI 85
Cdd:COG0457    73 PDDAEALNNLGLALQALGRYEEALEDYDKALEL-------DPDDAEALY-NLGLALLELGRYDEAIEAYERALELDPDDA 144

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1034620034  86 KPLLRRASAYEALEKYPMAYVDYKTVLQIDDN 117
Cdd:COG0457   145 DALYNLGIALEKLGRYEEALELLEKLEAAALA 176
COG3899 COG3899
Predicted ATPase [General function prediction only];
9-80 6.03e-04

Predicted ATPase [General function prediction only];


Pssm-ID: 443106 [Multi-domain]  Cd Length: 1244  Bit Score: 39.84  E-value: 6.03e-04
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034620034    9 VEELRAAGNESFRNGQYAEASALYGRALRVLQAQgsSDPEEESVLYSNRAACHLKDGNCRDCIKDCTSALAL 80
Cdd:COG3899    705 ARLLLRAARRALARGAYAEALRYLERALELLPPD--PEEEYRLALLLELAEALYLAGRFEEAEALLERALAA 774
PilF COG3063
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
20-117 6.54e-04

Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];


Pssm-ID: 442297 [Multi-domain]  Cd Length: 94  Bit Score: 37.46  E-value: 6.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034  20 FRNGQYAEASALYGRALRVlqaqgssDPEEESVLYsNRAACHLKDGNCRDCIKdCTSALALVPFSIKPLLRRASAYEALE 99
Cdd:COG3063     3 LKLGDLEEAEEYYEKALEL-------DPDNADALN-NLGLLLLEQGRYDEAIA-LEKALKLDPNNAEALLNLAELLLELG 73

                          90
                  ....*....|....*...
gi 1034620034 100 KYPMAYVDYKTVLQIDDN 117
Cdd:COG3063    74 DYDEALAYLERALELDPS 91
LapB COG2956
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ...
 6-132 9.17e-04

Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442196 [Multi-domain]  Cd Length: 275  Bit Score: 38.94  E-value: 9.17e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034   6 PDSVEELRAAGNESFRNGQYAEASALYGRALRVLQaqgssdpeEESVLYSNRAACHLKDGNCRDCIKDCTSALALVPFSI 85
Cdd:COG2956   107 PDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGP--------ENAHAYCELAELYLEQGDYDEAIEALEKALKLDPDCA 178

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1034620034  86 KPLLRRASAYEALEKYPMAYVDYKTVLQIDDNVTSAVEGINRMTRAL 132
Cdd:COG2956   179 RALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKL 225
LapB COG2956
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ...
 6-117 4.22e-03

Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442196 [Multi-domain]  Cd Length: 275  Bit Score: 37.02  E-value: 4.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034   6 PDSVEELRAAGNESFRNGQYAEASALYGRALrvlqaqgSSDPEEESVLYsNRAACHLKDGNCRDCIKDCTSALALVPFSI 85
Cdd:COG2956    39 PETVEAHLALGNLYRRRGEYDRAIRIHQKLL-------ERDPDRAEALL-ELAQDYLKAGLLDRAEELLEKLLELDPDDA 110

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1034620034  86 KPLLRRASAYEALEKYPMAYVDYKTVLQIDDN 117
Cdd:COG2956   111 EALRLLAEIYEQEGDWEKAIEVLERLLKLGPE 142
COG4700 COG4700
Uncharacterized conserved protein ECs_4300, contains TPR-like domain [Function unknown];
4-113 7.17e-03

Uncharacterized conserved protein ECs_4300, contains TPR-like domain [Function unknown];


Pssm-ID: 443735 [Multi-domain]  Cd Length: 249  Bit Score: 36.01  E-value: 7.17e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034   4 KFPDSVEELRAAGNESFRNGQYAEASALYGRALRVLQAQgssDPEeesVLYSnRAACHLKDGNCRDCIKDCTSALALVP- 82
Cdd:COG4700    84 EFADTVQNRVRLADALLELGRYDEAIELYEEALTGIFAD---DPH---ILLG-LAQALFELGRYAEALETLEKLIAKNPd 156

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1034620034  83 --FSIKPLLrRASAYEALEKYPMAYVDYKTVLQ 113
Cdd:COG4700   157 fkSSDAHLL-YARALEALGDLEAAEAELEALAR 188
BepA COG4783
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ...
 9-115 7.94e-03

Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443813 [Multi-domain]  Cd Length: 139  Bit Score: 35.17  E-value: 7.94e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034620034   9 VEELRAAGNESFRNGQYAEASALYGRALRvlqaqgsSDPEEESVLYsNRAACHLKDGNCRDCIKDCTSALALVPFSIKPL 88
Cdd:COG4783     4 AEALYALAQALLLAGDYDEAEALLEKALE-------LDPDNPEAFA-LLGEILLQLGDLDEAIVLLHEALELDPDEPEAR 75

                          90       100
                  ....*....|....*....|....*..
gi 1034620034  89 LRRASAYEALEKYPMAYVDYKTVLQID 115
Cdd:COG4783    76 LNLGLALLKAGDYDEALALLEKALKLD 102
DUF4919 pfam16266
Domain of unknown function (DUF4919); This family consists of uncharacterized proteins around ...
 44-101 8.97e-03

Domain of unknown function (DUF4919); This family consists of uncharacterized proteins around 230 residues in length and is mainly found in various Bacteroides and Prevotella species. The function of this family is unknown.


Pssm-ID: 406631  Cd Length: 184  Bit Score: 35.35  E-value: 8.97e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1034620034  44 SSDPEEESVLYSNraaCHLKDGNCRDCIKDCTSALALVPFSIKPLLRRASAYEALEKY 101
Cdd:pfam16266  52 SPDEDKLDVLYDK---KLPSEEECKEIISLAEEALDDNPFDLRQLNFLAYAYGLLGDE 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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