|
Name |
Accession |
Description |
Interval |
E-value |
| PLAT_polycystin |
cd01752 |
PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane ... |
1151-1269 |
1.04e-55 |
|
PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Pssm-ID: 238850 Cd Length: 120 Bit Score: 189.41 E-value: 1.04e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 1151 HYLIQVYTGYRRRAATTAKVVITLYGSEGHSEPHHLCDPEKTVFERGALDVFLLSTGSWLGDLHGLRLWHDNSGDSPSWY 1230
Cdd:cd01752 2 LYLVTVFTGWRRGAGTTAKVTITLYGAEGESEPHHLRDPEKPIFERGSVDSFLLTTPFPLGELQSIRLWHDNSGLSPSWY 81
|
90 100 110
....*....|....*....|....*....|....*....
gi 1039789998 1231 VSQVIVSDMTTRKKWHFQCNCWLAVDLGNCERDRVFTPA 1269
Cdd:cd01752 82 LSRVIVRDLQTGKKWFFLCNDWLSVEEGDGTVERTFPVA 120
|
|
| Polycystin_dom |
pfam20519 |
Polycystin domain; This domain represents the polycystin domain from group II of Transient ... |
1728-1913 |
1.09e-35 |
|
Polycystin domain; This domain represents the polycystin domain from group II of Transient receptor potential (TRP) channels (TRPP) including PKD1, PKD2, PKD2L and mucolipins. The polycystin domain display a sandwich-like shape with five beta-sheets in the tilted middle layer, three alpha-helices on one side and a large loop with two short antiparallel beta-sheets on the other.
Pssm-ID: 466668 Cd Length: 199 Bit Score: 135.24 E-value: 1.09e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 1728 FSEIKTVEDFYPWANGTLLPNLYGD-----YRGFITDGNSFLLGNVLIRQTRIPNDIFFPGSLHKQMKSPPQHQ-----E 1797
Cdd:pfam20519 2 LLTVTDLDDIWDWLSSVLLPALHSNktpsgLPGSFIAYESLLLGVPRLRQLRVRNSSCLVHDKFVREINECHAGysppsE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 1798 DRENYGAGWVPPDTNITKvdSIWHYQNQESLGGYPIQGELATYSGGGYVVRLGRNHSAATRVLQHLEQRRWLDHCTKALF 1877
Cdd:pfam20519 82 DRKLYSALPYKPVHYGSK--YWFIYTPPGLLMGYDHWGHLASYPSGGYVVLLPSSREESLKRLAYLQDNNWLDRGTRAVF 159
|
170 180 190
....*....|....*....|....*....|....*.
gi 1039789998 1878 VEFTVFNANVNLLCAVTLILESSGVGTFLTSLQLDS 1913
Cdd:pfam20519 160 VDFTLYNADINLFCVVTLRVEFPPTGGVLPSPSVQS 195
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
1918-2138 |
4.85e-34 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 131.63 E-value: 4.85e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 1918 QSSERGFAWIVSQVVYYLLVCYYAFIQGCRLKRQRLAFFTRKRNLLDTSIVLISFSILGLSMQSLSLLHKKMQQYHCDRD 1997
Cdd:pfam08016 2 YVTNRSLFILLCEIVFVVFFLYFVVEEILKIRKHRPSYLRSVWNLLDLAIVILSVVLIVLNIYRDFLADRLIKSVEASPV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 1998 RFISFYEALRVNSAVTHLRGFLLLFATVRVWDLLRHHAQLQVINKTLSKAWDEVLGFILIIVVLLSSYAMTFNLLFGWSI 2077
Cdd:pfam08016 82 TFIDFDRVAQLDNLYRIILAFLVFLTWLKLFKVLRFNKTMSLFTKTLSRAWKDLAGFALMFVIFFFAYAQFGYLLFGTQA 161
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1039789998 2078 SDYQSFFRSIVTVVGLLMGTSKHKEVIALYPILGSLLVLSSIILMGLVIINLFVSAILIAF 2138
Cdd:pfam08016 162 PNFSNFVKSILTLFRTILGDFGYNEIFSGNRVLGPLLFLTFVFLVIFILLNLFLAIINDSY 222
|
|
| PLAT_repeat |
cd01756 |
PLAT/LH2 domain repeats of family of proteins with unknown function. In general, PLAT/LH2 ... |
1152-1269 |
5.77e-29 |
|
PLAT/LH2 domain repeats of family of proteins with unknown function. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Pssm-ID: 238854 Cd Length: 120 Bit Score: 113.03 E-value: 5.77e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 1152 YLIQVYTGYRRRAATTAKVVITLYGSEGHSEPHHLCDPEKTV-FERGALDVFLLSTGSwLGDLHGLRLWHDNSGDSPSWY 1230
Cdd:cd01756 3 YEVTVKTGDVKGAGTDANVFITLYGENGDTGKRKLKKSNNKNkFERGQTDKFTVEAVD-LGKLKKIRIGHDNSGLGAGWF 81
|
90 100 110
....*....|....*....|....*....|....*....
gi 1039789998 1231 VSQVIVSDMTTRKKWHFQCNCWLAVDLGNCERDRVFTPA 1269
Cdd:cd01756 82 LDKVEIREPGTGDEYTFPCNRWLDKDEDDGQIVRELYPS 120
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
347-705 |
1.27e-26 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 119.25 E-value: 1.27e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 347 TSDTPASSSPPQgTLDTPSSSSPPQGTSDTpaSSSPPQGTSE-----TPASNSPPQGT-SETPGFSSPPQ-VTTATLVSS 419
Cdd:pfam05109 445 TTGLPSSTHVPT-NLTAPASTGPTVSTADV--TSPTPAGTTSgaspvTPSPSPRDNGTeSKAPDMTSPTSaVTTPTPNAT 521
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 420 SP-PQVTSETPASSSPT-QVTSETPASSSPT-QVTSDTPASNSP-PQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPA 495
Cdd:pfam05109 522 SPtPAVTTPTPNATSPTlGKTSPTSAVTTPTpNATSPTPAVTTPtPNATIPTLGKTSPTSAVTTPTPNATSPTVGETSPQ 601
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 496 SSSPPQV---TSDTPASSSPPQvTSETPASSSPPQVTSDTSASIS-PPQVISDTPASSSPPQVTSE-------------- 557
Cdd:pfam05109 602 ANTTNHTlggTSSTPVVTSPPK-NATSAVTTGQHNITSSSTSSMSlRPSSISETLSPSTSDNSTSHmplltsahptggen 680
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 558 ----TPASSSPTNMTSDTPASSSPTNMTSDTPASSSPT------NMTSDTPA--SSSPPWPVITEVTRPESTIPAGRslA 625
Cdd:pfam05109 681 itqvTPASTSTHHVSTSSPAPRPGTTSQASGPGNSSTStkpgevNVTKGTPPknATSPQAPSGQKTAVPTVTSTGGK--A 758
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 626 NITSKAQEDSPLGV-ISTHPQMSFQSSTSQQALDETAGERVPTIPDFQAHSEFQKACAILQRLRDFLPTSPTSaQVSVAN 704
Cdd:pfam05109 759 NSTTGGKHTTGHGArTSTEPTTDYGGDSTTPRTRYNATTYLPPSTSSKLRPRWTFTSPPVTTAQATVPVPPTS-QPRFSN 837
|
.
gi 1039789998 705 L 705
Cdd:pfam05109 838 L 838
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
325-652 |
6.51e-26 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 116.94 E-value: 6.51e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 325 PASSSPpqVTSATSASSSPPQGTSDTPASSSPPQGTLDTPSSSSPPQGTSDTPASSSP-PQGTSETPASNSP-PQGTSET 402
Cdd:pfam05109 461 PASTGP--TVSTADVTSPTPAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPtPNATSPTPAVTTPtPNATSPT 538
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 403 PGFSSPPQ-VTTATLVSSSP-PQVTSETPASSSPT--------QVTSETPASSSPTqVTSDTPASNSPPQ---GTSDTPG 469
Cdd:pfam05109 539 LGKTSPTSaVTTPTPNATSPtPAVTTPTPNATIPTlgktsptsAVTTPTPNATSPT-VGETSPQANTTNHtlgGTSSTPV 617
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 470 FSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASS 549
Cdd:pfam05109 618 VTSPPKNATSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNSTSHMPLLTSAHPTGGENITQVTPASTSTHHVSTS 697
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 550 SPPQVTSETPASSSPTNmtSDTPASSSPTNMTSDTPasssPTNMTS-DTPASSSPPWPVITEVTRPESTIPAGRSLANIT 628
Cdd:pfam05109 698 SPAPRPGTTSQASGPGN--SSTSTKPGEVNVTKGTP----PKNATSpQAPSGQKTAVPTVTSTGGKANSTTGGKHTTGHG 771
|
330 340
....*....|....*....|....*.
gi 1039789998 629 SKAQED--SPLGVISTHPQMSFQSST 652
Cdd:pfam05109 772 ARTSTEptTDYGGDSTTPRTRYNATT 797
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
159-661 |
9.80e-24 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 110.80 E-value: 9.80e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 159 GPGPLLPMKRRGAETERHMipgngPPlamcHQPAPPelfetlcfPIDPAS-------SAPPKATHRMTITSLTGRPQVTS 231
Cdd:PHA03247 2550 DPPPPLPPAAPPAAPDRSV-----PP----PRPAPR--------PSEPAVtsrarrpDAPPQSARPRAPVDDRGDPRGPA 2612
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 232 DtlASSSPPQGTS-DTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSppqgtSDTPASSSPPQVTSA 310
Cdd:PHA03247 2613 P--PSPLPPDTHApDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRL-----GRAAQASSPPQRPRR 2685
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 311 TSASSSPPQGTS--DTPASSSPPQvtsatsassspPQGTSDTPASSSPPQGTLDTPSSSSPPQgtsdTPASSSPPQGTSe 388
Cdd:PHA03247 2686 RAARPTVGSLTSlaDPPPPPPTPE-----------PAPHALVSATPLPPGPAAARQASPALPA----APAPPAVPAGPA- 2749
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 389 TPASNSPPQgtseTPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSP-PQGTSDT 467
Cdd:PHA03247 2750 TPGGPARPA----RPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAAlPPAASPA 2825
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 468 PGFSSPTQVTTATLVSSSPPQVTSDTPASS----------SPPQVTSDTPASSSPPQVTS-ETPASSSPPQVTSDTSASI 536
Cdd:PHA03247 2826 GPLPPPTSAQPTAPPPPPGPPPPSLPLGGSvapggdvrrrPPSRSPAAKPAAPARPPVRRlARPAVSRSTESFALPPDQP 2905
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 537 SPPQvisdTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASSSPtnmtsdtpaSSSPPWPVITEVTRPES 616
Cdd:PHA03247 2906 ERPP----QPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEP---------SGAVPQPWLGALVPGRV 2972
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 1039789998 617 TIPAGRSLANITSKAQEDSPLGVISTHPQMSFQSSTSQQALDETA 661
Cdd:PHA03247 2973 AVPRFRVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLALHEET 3017
|
|
| PLAT |
pfam01477 |
PLAT/LH2 domain; This domain is found in a variety of membrane or lipid associated proteins. ... |
1152-1267 |
6.14e-23 |
|
PLAT/LH2 domain; This domain is found in a variety of membrane or lipid associated proteins. It is called the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain. The known structure of pancreatic lipase shows this domain binds to procolipase pfam01114, which mediates membrane association. So it appears possible that this domain mediates membrane attachment via other protein binding partners. The structure of this domain is known for many members of the family and is composed of a beta sandwich.
Pssm-ID: 396180 Cd Length: 115 Bit Score: 95.58 E-value: 6.14e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 1152 YLIQVYTGYRRRAATTAKVVITLYGSEGHS--EPHHLCDPEktvFERGALDVFLLSTGSWLGDLHGLRLWHDNSGDSPSW 1229
Cdd:pfam01477 1 YQVKVVTGDELGAGTDADVYISLYGKVGESaqLEITLDNPD---FERGAEDSFEIDTDWDVGAILKINLHWDNNGLSDEW 77
|
90 100 110
....*....|....*....|....*....|....*....
gi 1039789998 1230 YVSQVIV-SDMTTRKKWHFQCNCWLAVDLGNcERDRVFT 1267
Cdd:pfam01477 78 FLKSITVeVPGETGGKYTFPCNSWVYGSKKY-KETRVFF 115
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
345-670 |
3.66e-21 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 99.65 E-value: 3.66e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 345 QGTSDTPASSSPPqgtldTPSSSSPPQGTSDTPASSS-PPQGTSETPASNSPPQGTSETPgfSSPPQVTTATLVSSSPPQ 423
Cdd:pfam17823 104 EGAADGAASRALA-----AAASSSPSSAAQSLPAAIAaLPSEAFSAPRAAACRANASAAP--RAAIAAASAPHAASPAPR 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 424 V--------TSETPASSSPTQVTSETPASSSPTQVTSD------TPAS--------NSPPQGTSDTPGFSSPTQVTTATL 481
Cdd:pfam17823 177 TaassttaaSSTTAASSAPTTAASSAPATLTPARGISTaatatgHPAAgtalaavgNSSPAAGTVTAAVGTVTPAALATL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 482 VSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTS---ET 558
Cdd:pfam17823 257 AAAAGTVASAAGTINMGDPHARRLSPAKHMPSDTMARNPAAPMGAQAQGPIIQVSTDQPVHNTAGEPTPSPSNTTlepNT 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 559 PASSSPTNMTSDT---------PASSSPTNMTSDTP--ASSSPTNMTSDTP---ASSSPPWPVITEVTRPESTipAGRSL 624
Cdd:pfam17823 337 PKSVASTNLAVVTttkaqakepSASPVPVLHTSMIPevEATSPTTQPSPLLptqGAAGPGILLAPEQVATEAT--AGTAS 414
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1039789998 625 ANITSKAQedsplGVISTHPQMSFQSSTSQQALDETAGERVPTIPD 670
Cdd:pfam17823 415 AGPTPRSS-----GDPKTLAMASCQLSTQGQYLVVTTDPLTPALVD 455
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
142-629 |
2.05e-20 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 99.63 E-value: 2.05e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 142 QAAAFPPQGASIWRNEFGPGPllpmkrRGAETERHMIPGNGPPLAMCHQPAPPELF---ETLCFPIDPASSAPPKATHRM 218
Cdd:PHA03247 2613 PPSPLPPDTHAPDPPPPSPSP------AANEPDPHPPPTVPPPERPRDDPAPGRVSrprRARRLGRAAQASSPPQRPRRR 2686
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 219 TItsltgRPQVTSDTLASSSPPQGTsdTPASSSPPQVTSATSASSSPPQGTSD--TPASSSPPQVTSATSA----SSSPP 292
Cdd:PHA03247 2687 AA-----RPTVGSLTSLADPPPPPP--TPEPAPHALVSATPLPPGPAAARQASpaLPAAPAPPAVPAGPATpggpARPAR 2759
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 293 QGTSDTPASSSPPQVtsatsasssppqgtsdtPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQGTLDTPSSSSPPqg 372
Cdd:PHA03247 2760 PPTTAGPPAPAPPAA-----------------PAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPP-- 2820
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 373 tSDTPASSSPPQgTSETPASNSPPQG---TSETPGFSSPPqvtTATLVSSSPPQVTSETPASSSPTQVTS-ETPASSSPT 448
Cdd:PHA03247 2821 -AASPAGPLPPP-TSAQPTAPPPPPGpppPSLPLGGSVAP---GGDVRRRPPSRSPAAKPAAPARPPVRRlARPAVSRST 2895
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 449 QVTSDTPASNSPPQgtsdTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQV 528
Cdd:PHA03247 2896 ESFALPPDQPERPP----QPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGR 2971
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 529 TSDTSASISPPQVISDTPASSSPPQVTSETPASSS-PTNMTSDTPASSSPTNM------TSDTPASSSPTNMTSDTPASS 601
Cdd:PHA03247 2972 VAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVSSwASSLALHEETDPPPVSLkqtlwpPDDTEDSDADSLFDSDSERSD 3051
|
490 500 510
....*....|....*....|....*....|....
gi 1039789998 602 S------PPWPVITEVTRPESTIPAGRSLANITS 629
Cdd:PHA03247 3052 LealdplPPEPHDPFAHEPDPATPEAGARESPSS 3085
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
179-604 |
2.20e-20 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 99.09 E-value: 2.20e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 179 PGNGPPLAMCHQPAPPELFETLCFPIDPASSAPPKATHrmtitSLTGRPQVTSDTLASSSPPQGTSDTPASSSPPQVTSA 258
Cdd:PHA03307 67 PPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREG-----SPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPV 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 259 TSASSSPPQGTSDTPASSSPPQvtsatsasssppqGTSDTPASSSPPQvtsatsasssppQGTSDTPASSSPPQVTSATS 338
Cdd:PHA03307 142 GSPGPPPAASPPAAGASPAAVA-------------SDAASSRQAALPL------------SSPEETARAPSSPPAEPPPS 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 339 ASSSPPQGTSdtPASSSPPQGTLDTPSSSSPPQGTSDTPASSSppqGTSETPASNSPPQGTSETPGFSSPPQVTTATLVS 418
Cdd:PHA03307 197 TPPAAASPRP--PRRSSPISASASSPAPAPGRSAADDAGASSS---DSSSSESSGCGWGPENECPLPRPAPITLPTRIWE 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 419 SSPPQVTSETPASSSPtqVTSETPASSSPTQVTSDTPASNSPPQGTSDtpGFSSPTQVTTATLVSSSPPQVTSDTPASSS 498
Cdd:PHA03307 272 ASGWNGPSSRPGPASS--SSSPRERSPSPSPSSPGSGPAPSSPRASSS--SSSSRESSSSSTSSSSESSRGAAVSPGPSP 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 499 PPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPT 578
Cdd:PHA03307 348 SRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFY 427
|
410 420
....*....|....*....|....*.
gi 1039789998 579 NMTSDTPASSSPtnmtsdTPASSSPP 604
Cdd:PHA03307 428 ARYPLLTPSGEP------WPGSPPPP 447
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
191-636 |
7.12e-20 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 97.55 E-value: 7.12e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 191 PAPPELFETlcfpIDPASSAPPKATHRMTItsltgrPQVTSDTLASSSPPQ-GTSDTPASSSPPQVTSATSASSSPPQGt 269
Cdd:PHA03307 2 DNAPDLYDL----IEAAAEGGEFFPRPPAT------PGDAADDLLSGSQGQlVSDSAELAAVTVVAGAAACDRFEPPTG- 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 270 sdtPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQvtsatsasssppqgtSDTPASSSPPQvtsatsasssppqgtsd 349
Cdd:PHA03307 71 ---PPPGPGTEAPANESRSTPTWSLSTLAPASPAREG---------------SPTPPGPSSPD----------------- 115
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 350 tPA-SSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPP-QVTTATLVSSSPPQvtSE 427
Cdd:PHA03307 116 -PPpPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPlSSPEETARAPSSPP--AE 192
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 428 TPASSSPTQVTSETPASSSPTQVTSDTPASnSPPQGTSDTPGFSSPTQVTTATLVSSSPPQvtSDTPASSSPPQVTSDTP 507
Cdd:PHA03307 193 PPPSTPPAAASPRPPRRSSPISASASSPAP-APGRSAADDAGASSSDSSSSESSGCGWGPE--NECPLPRPAPITLPTRI 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 508 ASSSPPQVTSETPASSSPPQVTSDTSASISPPqVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPAS 587
Cdd:PHA03307 270 WEASGWNGPSSRPGPASSSSSPRERSPSPSPS-SPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPS 348
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1039789998 588 SSPTNMTSDTPASSSPP--------WPVITEVTRPESTIPAGRSLANITSKAQEDSP 636
Cdd:PHA03307 349 RSPSPSRPPPPADPSSPrkrprpsrAPSSPAASAGRPTRRRARAAVAGRARRRDATG 405
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
171-619 |
1.27e-19 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 96.52 E-value: 1.27e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 171 AETERHMIPGNGPPLAMCHQPAppelFETLCFPIDPASSAPPKATH---RMTITSLTGRPQVTSDTlaSSSPPQGTSDTP 247
Cdd:pfam05109 412 ATTTTHKVIFSKAPESTTTSPT----LNTTGFAAPNTTTGLPSSTHvptNLTAPASTGPTVSTADV--TSPTPAGTTSGA 485
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 248 ASSSPPQVTSATSASSSPPQGTSDTPASSSPpqvtsatsasssPPQGTSDTPASSSPpqvtsatsasssPPQGTSDTPAS 327
Cdd:pfam05109 486 SPVTPSPSPRDNGTESKAPDMTSPTSAVTTP------------TPNATSPTPAVTTP------------TPNATSPTLGK 541
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 328 SSPpqvtsATSASSSPPQGTSDTPASSSP-PQGTLDTPSSSSPPQG-TSDTPASSSPPQGTSETPA--SNSPPQGTSETP 403
Cdd:pfam05109 542 TSP-----TSAVTTPTPNATSPTPAVTTPtPNATIPTLGKTSPTSAvTTPTPNATSPTVGETSPQAntTNHTLGGTSSTP 616
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 404 GFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSsptqvTSDTPASNSPPQGTSDTPGFSSPTQVTTAtlvS 483
Cdd:pfam05109 617 VVTSPPKNATSAVTTGQHNITSSSTSSMSLRPSSISETLSPS-----TSDNSTSHMPLLTSAHPTGGENITQVTPA---S 688
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 484 SSPPQVTSDTPASSSPPQVTSDTPASSSppqvTSETPASSSPPQVTSDTSAsiSPPQVISDTpaSSSPPQVTSETPASSS 563
Cdd:pfam05109 689 TSTHHVSTSSPAPRPGTTSQASGPGNSS----TSTKPGEVNVTKGTPPKNA--TSPQAPSGQ--KTAVPTVTSTGGKANS 760
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039789998 564 PTNMTSDT----PASSSP-TNMTSDTPASSSPTNMTSDTPASSS----PPWPVIT-EVTRPESTIP 619
Cdd:pfam05109 761 TTGGKHTTghgaRTSTEPtTDYGGDSTTPRTRYNATTYLPPSTSsklrPRWTFTSpPVTTAQATVP 826
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
144-607 |
2.06e-19 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 96.55 E-value: 2.06e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 144 AAFPPQGasiWRNEFGPGPLLPMkrrgAETERHMIPGNGPplamchQPAPPELFetlcfPIDPASSAPPKATHRMTITSL 223
Cdd:PHA03247 2676 ASSPPQR---PRRRAARPTVGSL----TSLADPPPPPPTP------EPAPHALV-----SATPLPPGPAAARQASPALPA 2737
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 224 TGRPQVTSDTLASSSPPQGTSDTPASSSPPQVTSATSasssppqgtsdtPASSSPPQVTSATSASSSPPQGTSDTPASSS 303
Cdd:PHA03247 2738 APAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAA------------PAAGPPRRLTRPAVASLSESRESLPSPWDPA 2805
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 304 PPQVTSATSASSSPpqgTSDTPASSSPPQvtsatsasssppqgTSDTPASSSPPQGtldtPSSSSPPQGTSDTP----AS 379
Cdd:PHA03247 2806 DPPAAVLAPAAALP---PAASPAGPLPPP--------------TSAQPTAPPPPPG----PPPPSLPLGGSVAPggdvRR 2864
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 380 SSPPQGTSETPASNS-PPQGTSETPGFSSPPQvttaTLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASN 458
Cdd:PHA03247 2865 RPPSRSPAAKPAAPArPPVRRLARPAVSRSTE----SFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQ 2940
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 459 SPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISP 538
Cdd:PHA03247 2941 PPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLALHEETDPP 3020
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039789998 539 PQVISDT---PASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSPPWPV 607
Cdd:PHA03247 3021 PVSLKQTlwpPDDTEDSDADSLFDSDSERSDLEALDPLPPEPHDPFAHEPDPATPEAGARESPSSQFGPPPL 3092
|
|
| PLAT |
cd00113 |
PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. ... |
1151-1253 |
5.86e-19 |
|
PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.
Pssm-ID: 238061 Cd Length: 116 Bit Score: 84.31 E-value: 5.86e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 1151 HYLIQVYTGYRRRAATTAKVVITLYGSEGHSEPHhLCDPEKTVFERGALDVFLLSTGSWLGDLHGLRLWHDNSGDSPSWY 1230
Cdd:cd00113 2 RYTVTIKTGDKKGAGTDSNISLALYGENGNSSDI-PILDGPGSFERGSTDTFQIDLKLDIGDITKVYLRRDGSGLSDGWY 80
|
90 100
....*....|....*....|...
gi 1039789998 1231 VSQVIVSDMTTRKKWHFQCNCWL 1253
Cdd:cd00113 81 CESITVQALGTKKVYTFPVNRWV 103
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
192-622 |
3.46e-18 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 92.16 E-value: 3.46e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 192 APPELFETLCFPIDPASSAPPKATHRMTITSLTGRPQVTSDTLASSSPPQGTSDTPASSSPPQvtsatsasssppqGTSD 271
Cdd:PHA03307 53 VTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPD-------------PPPP 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 272 TPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVtsatsasssppqGTSDTPASSSPPQVTSATSASSSPPQgTSDTP 351
Cdd:PHA03307 120 TPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAA------------GASPAAVASDAASSRQAALPLSSPEE-TARAP 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 352 ASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQ-----VTTATLVSSSPPQVTS 426
Cdd:PHA03307 187 SSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSgcgwgPENECPLPRPAPITLP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 427 ETPASSSPTQVTSETPASSSPtqVTSDTPASNSPPQGTSDTPGFSSPtqvttATLVSSSPPQVTSDTPASSSPPQVTSDT 506
Cdd:PHA03307 267 TRIWEASGWNGPSSRPGPASS--SSSPRERSPSPSPSSPGSGPAPSS-----PRASSSSSSSRESSSSSTSSSSESSRGA 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 507 PASSSPPQVTSETPASSSPPQVTSDTSASISP---PQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSD 583
Cdd:PHA03307 340 AVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPsraPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDA 419
|
410 420 430
....*....|....*....|....*....|....*....
gi 1039789998 584 TPASSSPTNMTSDTPASSSpPWPvitEVTRPestiPAGR 622
Cdd:PHA03307 420 GAASGAFYARYPLLTPSGE-PWP---GSPPP----PPGR 450
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
207-576 |
1.37e-17 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 88.48 E-value: 1.37e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 207 ASSAPP------KATHRMTITSLTGRPQVTSDTLASSSPP--QGTSDTPASSSPpqvtsATSASSSPPQGTSDTPASSSP 278
Cdd:pfam17823 62 AATAAPapvtltKGTSAAHLNSTEVTAEHTPHGTDLSEPAtrEGAADGAASRAL-----AAAASSSPSSAAQSLPAAIAA 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 279 PQVTSATSASSSPPQgtsdTPASSSPpqvtsatsasSSPPQGTSDTPASSSPPQvtsatSASSSPPQGTSDTPASSSPPQ 358
Cdd:pfam17823 137 LPSEAFSAPRAAACR----ANASAAP----------RAAIAAASAPHAASPAPR-----TAASSTTAASSTTAASSAPTT 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 359 GTLDTPSSSSPPQGTSDTPASSSPPQ---GTSETPASNSPPQGTSETPGFSSPPQV-----------TTATLVSSSPPQV 424
Cdd:pfam17823 198 AASSAPATLTPARGISTAATATGHPAagtALAAVGNSSPAAGTVTAAVGTVTPAALatlaaaagtvaSAAGTINMGDPHA 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 425 TSETPASSSPTQVTSETPASSS------PT-QVTSDTPASNSPPQGTSdTPGFSSPTQVTTATLVSSSPPQVTSDTPASS 497
Cdd:pfam17823 278 RRLSPAKHMPSDTMARNPAAPMgaqaqgPIiQVSTDQPVHNTAGEPTP-SPSNTTLEPNTPKSVASTNLAVVTTTKAQAK 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 498 SPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQvisdtpassSPPQVTSE-TP--ASSSPTNMTS---DT 571
Cdd:pfam17823 357 EPSASPVPVLHTSMIPEVEATSPTTQPSPLLPTQGAAGPGILL---------APEQVATEaTAgtASAGPTPRSSgdpKT 427
|
....*
gi 1039789998 572 PASSS 576
Cdd:pfam17823 428 LAMAS 432
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
182-564 |
3.43e-17 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 88.43 E-value: 3.43e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 182 GPPLAMCHQPAP-PELFETLCFPIDPASSAPPKATHrmtitslTGRPQVTSDTLASSSP-PQGTSDTPASSSPpqvtsat 259
Cdd:pfam05109 465 GPTVSTADVTSPtPAGTTSGASPVTPSPSPRDNGTE-------SKAPDMTSPTSAVTTPtPNATSPTPAVTTP------- 530
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 260 sasssPPQGTSDTPASSSPpqvtsATSASSSPPQGTSDTPASSSP-PQVTSATSASSSPPQG-TSDTPASSSPP--QVTS 335
Cdd:pfam05109 531 -----TPNATSPTLGKTSP-----TSAVTTPTPNATSPTPAVTTPtPNATIPTLGKTSPTSAvTTPTPNATSPTvgETSP 600
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 336 ATSASSSPPQGTSDTPASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSP-----PQ 410
Cdd:pfam05109 601 QANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNSTSHMPLLTSAhptggEN 680
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 411 VTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPT------QVTSDTPASN-SPPQGTSDTPGfSSPTQVTTATLVS 483
Cdd:pfam05109 681 ITQVTPASTSTHHVSTSSPAPRPGTTSQASGPGNSSTStkpgevNVTKGTPPKNaTSPQAPSGQKT-AVPTVTSTGGKAN 759
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 484 SSPPQVTSDTPASSSPPQVTSDTPASSSPPQvTSETPASSSPPQvtsdTSASISPPQVISDTPASSSppQVTSETPASSS 563
Cdd:pfam05109 760 STTGGKHTTGHGARTSTEPTTDYGGDSTTPR-TRYNATTYLPPS----TSSKLRPRWTFTSPPVTTA--QATVPVPPTSQ 832
|
.
gi 1039789998 564 P 564
Cdd:pfam05109 833 P 833
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
206-577 |
6.17e-17 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 87.66 E-value: 6.17e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 206 PASSAPPKATHRMTITSLTGRPQVTSDTLASSSPPQGTSDtpaSSSPPQVTSATSASSSPPQGTSDTPASSSPpqvtsat 285
Cdd:pfam05109 461 PASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPRDNGTE---SKAPDMTSPTSAVTTPTPNATSPTPAVTTP------- 530
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 286 sasssPPQGTSDTPASSSPpqvtsATSASSSPPQGTSDTPASSSP-PQVTSATSASSSPPQG-TSDTPASSSPPQGTlDT 363
Cdd:pfam05109 531 -----TPNATSPTLGKTSP-----TSAVTTPTPNATSPTPAVTTPtPNATIPTLGKTSPTSAvTTPTPNATSPTVGE-TS 599
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 364 PSSSSPPQ---GTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETP--ASSSPT--- 435
Cdd:pfam05109 600 PQANTTNHtlgGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNSTSHMPllTSAHPTgge 679
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 436 QVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSS-PTQVTTATLVSSSPPQVTSDTPASS----SPPQVTSDTPASS 510
Cdd:pfam05109 680 NITQVTPASTSTHHVSTSSPAPRPGTTSQASGPGNSStSTKPGEVNVTKGTPPKNATSPQAPSgqktAVPTVTSTGGKAN 759
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1039789998 511 SP---PQVTSETPASSSPPqvTSDTSASISPPQVISDT-----PASSSP--PQVTSETPASSSpTNMTSDTPASSSP 577
Cdd:pfam05109 760 STtggKHTTGHGARTSTEP--TTDYGGDSTTPRTRYNAttylpPSTSSKlrPRWTFTSPPVTT-AQATVPVPPTSQP 833
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
179-576 |
7.14e-17 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 87.51 E-value: 7.14e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 179 PGNGPPLAMChQPAPPELFETLCFPIDPASSAPPKATHRMT--ITSLTGRPQVTSDTLASSSPP--QGTSDTPASSSPPQ 254
Cdd:pfam03154 186 PPPPGTTQAA-TAGPTPSAPSVPPQGSPATSQPPNQTQSTAapHTLIQQTPTLHPQRLPSPHPPlqPMTQPPPPSQVSPQ 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 255 VTSATSASssppqgtSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQvt 334
Cdd:pfam03154 265 PLPQPSLH-------GQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQ-- 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 335 satsasssppqgtSDTPASSSP-PQGTLDTPSSSSPPQgtsdTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTT 413
Cdd:pfam03154 336 -------------SQQPPREQPlPPAPLSMPHIKPPPT----TPIPQLPNPQSHKHPPHLSGPSPFQMNSNLPPPPALKP 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 414 ATLVSSSPPQVTSETPASSSPTQVTSETPASSSP--TQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTS 491
Cdd:pfam03154 399 LSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQPPvlTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPP 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 492 DTPASSSPPQVTSDTPASSSPPQVTSETPASssppqvtsdTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDT 571
Cdd:pfam03154 479 SGPPTSTSSAMPGIQPPSSASVSSSGPVPAA---------VSCPLPPVQIKEEALDEAEEPESPPPPPRSPSPEPTVVNT 549
|
....*
gi 1039789998 572 PASSS 576
Cdd:pfam03154 550 PSHAS 554
|
|
| Treacle |
pfam03546 |
Treacher Collins syndrome protein Treacle; |
203-603 |
4.63e-16 |
|
Treacher Collins syndrome protein Treacle;
Pssm-ID: 460967 [Multi-domain] Cd Length: 531 Bit Score: 83.97 E-value: 4.63e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 203 PIDPASSAPPKATHRMTITSLTGRPQVTSDTLASSSPPQGtsDTPA----SSSPPQV-----TSATSASSSPPQGTSDTP 273
Cdd:pfam03546 67 PRKGAPPVPPGKTGPAAAQAQAGKPEEDSESSSEESDSDG--ETPAaatlTTSPAQVkplgkNSQVRPASTVGKGPSGKG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 274 ASSSPPQVTSATSASSSPPQGTSDTPASS--------SPPQVTSATSASSSPPQGTSDTP---ASSSPPQVTSATSASSS 342
Cdd:pfam03546 145 ANPAPPGKAGSAAPLVQVGKKEEDSESSSeesdsegeAPPAATQAKPSGKILQVRPASGPakgAAPAPPQKAGPVATQVK 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 343 PPQGTSDT-------------PASSSPPQG--TLDTPSS-SSPPQGTSDTPASSSPPQGTSETPASNSppQGTSETPGFS 406
Cdd:pfam03546 225 AERSKEDSesseessdseeeaPAAATPAQAkpALKTPQTkASPRKGTPITPTSAKVPPVRVGTPAPWK--AGTVTSPACA 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 407 SPPQVTTAT----LVSSSPPQVTSETPASSSPTQVTSET-------PASSSPTQVTSDTPASNSPPQGTSdtpgfSSPTQ 475
Cdd:pfam03546 303 SSPAVARGAqrpeEDSSSSEESESEEETAPAAAVGQAKSvgkglqgKAASAPTKGPSGQGTAPVPPGKTG-----PAVAQ 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 476 VTTATLVSSSPPQVTSD------TPASSSPPQVTSDTPASSSPPQVTSETPASSSP-------PQVTSDTSASISPPQVI 542
Cdd:pfam03546 378 VKAEAQEDSESSEEESDseeaaaTPAQVKASGKTPQAKANPAPTKASSAKGAASAPgkvvaaaAQAKQGSPAKVKPPART 457
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039789998 543 SDTPASSSPPQ---------VTSETPASSSPTNMTSDTPASSSPTNMTSD--TPASSSPTNMTSDTPASSSP 603
Cdd:pfam03546 458 PQNSAISVRGQasvpavgkaVATAAQAQKGPVGGPQEEDSESSEEESDSEeeAPAQAKPSGKTPQVRAASAP 529
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
211-608 |
1.44e-15 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 83.28 E-value: 1.44e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 211 PPKATHRMTITSLTGRPQVTSDTLASSSPPQGTSDTpASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSS 290
Cdd:pfam03154 94 PERATAKKSKTQEISRPNSPSEGEGESSDGRSVNDE-GSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQILQTQPP 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 291 PPQGTSDTPASSSPPQVTSATSASSSPPQGTSD-----TPASSSPPQVTSATSASSSPPQGTSDT-----PASSSPPQG- 359
Cdd:pfam03154 173 VLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSvppqgSPATSQPPNQTQSTAAPHTLIQQTPTLhpqrlPSPHPPLQPm 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 360 TLDTPSSSSPPQGTSDT-------PASSS------------PPQG---TSETPASNSPPQGTSETPGFSSPPQVTTATLV 417
Cdd:pfam03154 253 TQPPPPSQVSPQPLPQPslhgqmpPMPHSlqtgpshmqhpvPPQPfplTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQS 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 418 SSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPgFSSPTQVTT-------ATLVSSSPP--- 487
Cdd:pfam03154 333 QLQSQQPPREQPLPPAPLSMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPSP-FQMNSNLPPppalkplSSLSTHHPPsah 411
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 488 ----QVTSDTPASSSPP-------QVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTS 556
Cdd:pfam03154 412 ppplQLMPQSQQLPPPPaqppvltQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTSTSSAMPG 491
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1039789998 557 ETPASSSPTNMTSDTPASSS----PTNMTSDTPASSSPTNMTSDTPASSSPPWPVI 608
Cdd:pfam03154 492 IQPPSSASVSSSGPVPAAVScplpPVQIKEEALDEAEEPESPPPPPRSPSPEPTVV 547
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
373-609 |
4.59e-15 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 80.57 E-value: 4.59e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 373 TSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTS 452
Cdd:COG3469 1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 453 DTPASNSPPqgtsdtpgfSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPpqVTSDT 532
Cdd:COG3469 81 TATAAAAAA---------TSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSA--GSTTT 149
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1039789998 533 SASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASSsptnmtsdTPASSSPPWPVIT 609
Cdd:COG3469 150 TTTVSGTETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTT--------GPPTPGLPKHVLV 218
|
|
| Treacle |
pfam03546 |
Treacher Collins syndrome protein Treacle; |
323-635 |
5.38e-15 |
|
Treacher Collins syndrome protein Treacle;
Pssm-ID: 460967 [Multi-domain] Cd Length: 531 Bit Score: 80.50 E-value: 5.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 323 DTPASSSPPQVTSATSASSSppQGTSdTPASSSPPQGTLDTPSSSSPPQGTS--------DTPASSSPPQGTSETPASNS 394
Cdd:pfam03546 37 ETPAAKTPLQAKPSGKTPQV--RAAS-APAKESPRKGAPPVPPGKTGPAAAQaqagkpeeDSESSSEESDSDGETPAAAT 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 395 PPQGTSETPGFSSPPQVTTATLVSSSP------PQVTSETPASSSPTQVTSETPASSSPTQvTSDTPASNSPPQGTSDTP 468
Cdd:pfam03546 114 LTTSPAQVKPLGKNSQVRPASTVGKGPsgkganPAPPGKAGSAAPLVQVGKKEEDSESSSE-ESDSEGEAPPAATQAKPS 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 469 GFSSPTQVTT--ATLVSSSPPQVTSdtPASSsppQVTSDTP---ASSSPPQVTSE-------TPASSSPPQVTSDTSAsi 536
Cdd:pfam03546 193 GKILQVRPASgpAKGAAPAPPQKAG--PVAT---QVKAERSkedSESSEESSDSEeeapaaaTPAQAKPALKTPQTKA-- 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 537 SPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSPPWPVIT------- 609
Cdd:pfam03546 266 SPRKGTPITPTSAKVPPVRVGTPAPWKAGTVTSPACASSPAVARGAQRPEEDSSSSEESESEEETAPAAAVGQaksvgkg 345
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1039789998 610 ---------------EVTRPESTIPAGRSLANITSKAQEDS 635
Cdd:pfam03546 346 lqgkaasaptkgpsgQGTAPVPPGKTGPAVAQVKAEAQEDS 386
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
183-658 |
1.41e-14 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 79.81 E-value: 1.41e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 183 PPLAMCHQPAPPelfetlcfpidPASSAPPKAThrmtitsltgrpqvtsdTLASSSPPQGTSDTPASSSPPqvtsatsaS 262
Cdd:pfam03154 171 PPVLQAQSGAAS-----------PPSPPPPGTT-----------------QAATAGPTPSAPSVPPQGSPA--------T 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 263 SSPPQGTSDTPASSSPPQvtsatsasssppQGTSDTPASSSPPQvtsatsasSSPPQGTSDTPASSSPPQvtsatsasss 342
Cdd:pfam03154 215 SQPPNQTQSTAAPHTLIQ------------QTPTLHPQRLPSPH--------PPLQPMTQPPPPSQVSPQ---------- 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 343 ppqgtSDTPASSSPPQGTLDTPSSSSPPQgtSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPP 422
Cdd:pfam03154 265 -----PLPQPSLHGQMPPMPHSLQTGPSH--MQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQ 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 423 QVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPgFSSPtqvttatlvSSSPPqvtsdTPASSSPPQV 502
Cdd:pfam03154 338 QPPREQPLPPAPLSMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPSP-FQMN---------SNLPP-----PPALKPLSSL 402
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 503 TSDTPASSSPP--QVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETP-------ASSSPTNMTSDTPA 573
Cdd:pfam03154 403 STHHPPSAHPPplQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPfpqhpfvPGGPPPITPPSGPP 482
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 574 SSSPTNMTSDTPASSSPTNMTSDTPASSSPPWPVIT-------EVTRPESTIPAGRSlanitskaqeDSPLGVISTHPQM 646
Cdd:pfam03154 483 TSTSSAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQikeealdEAEEPESPPPPPRS----------PSPEPTVVNTPSH 552
|
490
....*....|..
gi 1039789998 647 SFQSSTSQQALD 658
Cdd:pfam03154 553 ASQSARFYKHLD 564
|
|
| SPT5 |
COG5164 |
Transcription elongation factor SPT5 [Transcription]; |
320-674 |
1.71e-14 |
|
Transcription elongation factor SPT5 [Transcription];
Pssm-ID: 444063 [Multi-domain] Cd Length: 495 Bit Score: 78.53 E-value: 1.71e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 320 GTSDTPA----SSSPPQvtsatsasssppQGTSDTPASSSPPQGTLDTPSSSSPPQGT-SDTPA----SSSPPQGT-SET 389
Cdd:COG5164 24 QGSTKPAqnqgSTRPAG------------NTGGTRPAQNQGSTTPAGNTGGTRPAGNQgATGPAqnqgGTTPAQNQgGTR 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 390 PASNSPPQGTSETPGFSSPPQVTTATLV-----SSSPPQVTSETPASssPTQVTSETPASSSPTQVTsdTPASNSPPQGT 464
Cdd:COG5164 92 PAGNTGGTTPAGDGGATGPPDDGGATGPpddggSTTPPSGGSTTPPG--DGGSTPPGPGSTGPGGST--TPPGDGGSTTP 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 465 SDTPGFSSPTQVTTATlvssSPPQvtsdtPASSSPPQVTSDTPAS--SSPPQVTSETPASSSPPQVTSDTSASispPQVI 542
Cdd:COG5164 168 PGPGGSTTPPDDGGST----TPPN-----KGETGTDIPTGGTPRQgpDGPVKKDDKNGKGNPPDDRGGKTGPK---DQRP 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 543 SDTPASSSPPQVTSETPASSSPTNmTSDTPASSSPTNMTSDTPASSS--PTNMTSDTPASSSPPWPVITEVTRPESTIPA 620
Cdd:COG5164 236 KTNPIERRGPERPEAAALPAELTA-LEAENRAANPEPATKTIPETTTvkDLATVLGKKGSDLVTNLMKKGKGTNINAALD 314
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1039789998 621 GRSLANITSKAQedsPLGVISTHPQMSFQSSTSQQALDETAGER--VPTIPDFQAH 674
Cdd:COG5164 315 FETAATIALEGN---VITEKEIEADIMETVTTEEQETDSLLEETppVPVVMGHVDH 367
|
|
| Not5 |
COG5665 |
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]; |
186-637 |
1.43e-13 |
|
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];
Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 76.63 E-value: 1.43e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 186 AMCHQPAPPELFETLCFPIDPASSAPpkATHRMTITSLTgrPQVTSDTLASSSP------------PQGTSDTPASSSPP 253
Cdd:COG5665 178 AVPSAPAAPPNAVDYSVLVPIAAQDP--AASVSTPQAFN--ASATSGRSQHIVQaakrvgvewwgdPSLLATPPATPATE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 254 QVTSATSASSSPPQGTSDTPASSSPpqvtsatsasssppQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQV 333
Cdd:COG5665 254 EKSSQQPKSQPTSPSGGTTPPSTNQ--------------LTTSNTPTSTAKAQPQPPTKKQPAKEPPSDTASGNPSAPSV 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 334 TSAtsasssppqgtSDTPASSSPPqgtldTPSSSSPPQGTSDTPASSSPpqgtsetpasnsppqgtsetpgfSSPPQVTT 413
Cdd:COG5665 320 LIN-----------SDSPTSEDPA-----TASVPTTEETTAFTTPSSVP-----------------------STPAEKDT 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 414 ATLVSSSPPQVTSetPASSSPTQVTSETPASSSPTQVTSDTPASNSPP---QGTSDTPGFSSPTQvtTATLVSSSPPQvt 490
Cdd:COG5665 361 PATDLATPVSPTP--PETSVDKKVSPDSATSSTKSEKEGGTASSPMPPniaIGAKDDVDATDPSQ--EAKEYTKNAPM-- 434
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 491 sdTPASSSPPQVTSDTPAS---SSPPQVTSET---------PASSSPPQVTSDTSAS-----ISPPQVISDTPASSSPPQ 553
Cdd:COG5665 435 --TPEADSAPESSVRTEASpsaGSDLEPENTTlrdpapnaiPPPEDPSTIGRLSSGDklaneTGPPVIRRDSTPSSTADQ 512
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 554 VTSETPASSSPTNMTSdtpASSSPTNMTSDTPASSSPTNMTSDTpaSSSPPWPvITEVTRPESTIpAGRSLANITSKAQE 633
Cdd:COG5665 513 SIVGVLAFGLDQRTQA---EISVEAASRSNPLLNSQVKSFPLGK--RSEGAKG-KTQTDRGISNA-LVNASALITNLKSA 585
|
....
gi 1039789998 634 DSPL 637
Cdd:COG5665 586 ARRS 589
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
351-605 |
3.40e-13 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 75.27 E-value: 3.40e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 351 PASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQ---VTSE 427
Cdd:PRK07003 362 VTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPAtadRGDD 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 428 TPASSSPTQVTSETPASSSPT-QVTSDTPASNSPPQG--TSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTS 504
Cdd:PRK07003 442 AADGDAPVPAKANARASADSRcDERDAQPPADSGSASapASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDA 521
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 505 DTPASSSPPQVTSETPASSSPPQVTSDTSASI-----SPPQVISD------TPASSSPPQVTSETPASSSPtnmTSDTPA 573
Cdd:PRK07003 522 PAAAAPPAPEARPPTPAAAAPAARAGGAAAALdvlrnAGMRVSSDrgaraaAAAKPAAAPAAAPKPAAPRV---AVQVPT 598
|
250 260 270
....*....|....*....|....*....|..
gi 1039789998 574 SSSPTNMTSDTPASSSPTNMTSDTPaSSSPPW 605
Cdd:PRK07003 599 PRARAATGDAPPNGAARAEQAAESR-GAPPPW 629
|
|
| Treacle |
pfam03546 |
Treacher Collins syndrome protein Treacle; |
209-603 |
5.64e-13 |
|
Treacher Collins syndrome protein Treacle;
Pssm-ID: 460967 [Multi-domain] Cd Length: 531 Bit Score: 73.95 E-value: 5.64e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 209 SAPPKATHRMTITSLTGRPQVTSDtlaSSSPPQGTSD--TPASSSPPQVTSATSASSSppQGTSdTPASSSP-----PQV 281
Cdd:pfam03546 2 PATPGKAGPAATQAKAGKPEEDSE---SSSEEESDSEeeTPAAKTPLQAKPSGKTPQV--RAAS-APAKESPrkgapPVP 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 282 TSATSASSSPPQ-GTSDTPASSSPPQVTSATSASSSPPQGTSdtPASSSP----PQVTSATSASS-SPPQGTSDTPASSS 355
Cdd:pfam03546 76 PGKTGPAAAQAQaGKPEEDSESSSEESDSDGETPAAATLTTS--PAQVKPlgknSQVRPASTVGKgPSGKGANPAPPGKA 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 356 PPQGTL------DTPSSSSPPQGTSDTPAsssPPQGTSETPASNSPPQGTSETP---GFSSPPQVT--TATLVSSSPPQV 424
Cdd:pfam03546 154 GSAAPLvqvgkkEEDSESSSEESDSEGEA---PPAATQAKPSGKILQVRPASGPakgAAPAPPQKAgpVATQVKAERSKE 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 425 TSETPASSSPTQvtSETPASSSPTQV-----TSDTPAsnSPPQGTSDTPgfsSPTQVTTATLVSSSPPQV-TSDTPASSS 498
Cdd:pfam03546 231 DSESSEESSDSE--EEAPAAATPAQAkpalkTPQTKA--SPRKGTPITP---TSAKVPPVRVGTPAPWKAgTVTSPACAS 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 499 PPQVTSDT--PASSSPPQVTSETPASSSPP----QVTS-----DTSASISPPQVISDTPASSSPP--------QVTSETP 559
Cdd:pfam03546 304 SPAVARGAqrPEEDSSSSEESESEEETAPAaavgQAKSvgkglQGKAASAPTKGPSGQGTAPVPPgktgpavaQVKAEAQ 383
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1039789998 560 ASSSPTNMTSD------TPASSSPTNMTSDTPASSSPTNMTSDTPASSSP 603
Cdd:pfam03546 384 EDSESSEEESDseeaaaTPAQVKASGKTPQAKANPAPTKASSAKGAASAP 433
|
|
| DUF2967 |
pfam11179 |
Protein of unknown function (DUF2967); This family of proteins with unknown function appears ... |
236-732 |
3.69e-12 |
|
Protein of unknown function (DUF2967); This family of proteins with unknown function appears to be restricted to Drosophila.
Pssm-ID: 402654 [Multi-domain] Cd Length: 954 Bit Score: 71.99 E-value: 3.69e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 236 SSSPPQGTSDTPASSsPPQVTSATSASSsppqgTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASS 315
Cdd:pfam11179 15 SSAPPHAALAGPITA-APTGAAAAAATS-----TAAASAASSTITAPGAGPGGTPTSRSRGAQAMTASLAHAAQGNANAN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 316 SPPQGTSDTPASSSPPQ------VTSATSASSSPPQGTSDTPASSSPPQgtldTPSSSSPPQGTSDTPASSSPPQgTSET 389
Cdd:pfam11179 89 KSTRNNSNSSNNNGKPKplaacyMSTRSAAMMALALGQQSGEKKDKKPA----AGKAASPAQSQSQSQSQNASPH-TNNR 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 390 PASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTsetpASSSPTQVTSDTPASNSPPQGTSDTPG 469
Cdd:pfam11179 164 AVSMTRPAATRRLPNAAAMSNVNAANSTCTATATSLPSNRARSKPSTPT----ATRAAAQLNGMGIFSGGSNSSGSDNDG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 470 FSSpTQVTTAT----LVSSSPPQVTSDTPASSsppqvTSDTPASSSPPQVTSET--PASSSPPQVTSDTSASISPPQVIS 543
Cdd:pfam11179 240 FSA-SGSSAATalrrLYFKSGRSIKNKINAST-----SSSTPLNGLPLNAVSNAfhNSVGGATAMHAMGTAGGVPKLVVM 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 544 DTpASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASSSPTNmtsdtPASSSPPWPVITEVT-----RPESTI 618
Cdd:pfam11179 314 GT-SSASIPDTTINTSTDSACTLITNVTHTDTSETCDSLDLGDNSGPSE-----PLFSSLEEPLLTAIHidsehEGFGGM 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 619 PAGRSLANITSKAQ-EDSPLGVISTHPQMSFQSSTSQQ--ALDETAGERVPTIPDFQAHSEFQKACAILQRLRDFLPTSP 695
Cdd:pfam11179 388 AGGRGGANGRGATElELTSCSRYPPRPDMNLQDSTESQesCLSILTGEPSSTTPLLSSQRRHPTGGHSPGSQRQEERRER 467
|
490 500 510
....*....|....*....|....*....|....*..
gi 1039789998 696 TSAQVSVANLLIDLSEQLLVLPFQKNNSWSSQTPAVS 732
Cdd:pfam11179 468 KEREPSTAPPPTRGREHFTFDPPQSPKSARSSEKARS 504
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
147-513 |
4.10e-12 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 72.13 E-value: 4.10e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 147 PPQGASIWRNEFGPGPLLP--MKRRGAETERHMIPGNGPPlAMCHQPAPPELFETLCFPIDPASSAPPKATHRMTITSLT 224
Cdd:PHA03307 79 APANESRSTPTWSLSTLAPasPAREGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 225 GRPQVTSDT-------LASSSPPQG--TSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSP---------------PQ 280
Cdd:PHA03307 158 SPAAVASDAassrqaaLPLSSPEETarAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPapapgrsaaddagasSS 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 281 VTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPqvtsatsassSPPQGTSDTPASSSPPQGT 360
Cdd:PHA03307 238 DSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSS----------SSPRERSPSPSPSSPGSGP 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 361 LDTPSS-----SSPPQGTSDTPASSSPPqgtSETPASnSPPQGTSETPGFSSPPqvttatlvSSSPPQVTSETPASSSPT 435
Cdd:PHA03307 308 APSSPRassssSSSRESSSSSTSSSSES---SRGAAV-SPGPSPSRSPSPSRPP--------PPADPSSPRKRPRPSRAP 375
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1039789998 436 QVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPpqvtsdTPASSSPP 513
Cdd:PHA03307 376 SSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLLTPSGEP------WPGSPPPP 447
|
|
| LH2 |
smart00308 |
Lipoxygenase homology 2 (beta barrel) domain; |
1151-1256 |
4.94e-12 |
|
Lipoxygenase homology 2 (beta barrel) domain;
Pssm-ID: 214608 [Multi-domain] Cd Length: 105 Bit Score: 64.20 E-value: 4.94e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 1151 HYLIQVYTGYRRRAATTAKVVITLYGSEGHSEPHHLCDPEKTVFERGALDVFLLSTGSWLGDLHGLRLWHDNsgDSPSWY 1230
Cdd:smart00308 2 KYKVTVTTGGLDFAGTTASVSLSLVGAEGDGKESKLDYLFKGIFARGSTYEFTFDVDEDFGELGAVKIKNEH--RHPEWF 79
|
90 100
....*....|....*....|....*.
gi 1039789998 1231 VSQVIVSDMTTRKKWHFQCNCWLAVD 1256
Cdd:smart00308 80 LKSITVKDLPTGGKYHFPCNSWVYPD 105
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
442-612 |
9.72e-12 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 69.99 E-value: 9.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 442 PASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPpqvTSDTPASSSPPQVTSETP- 520
Cdd:pfam17823 48 PRADNKSSEQ*NFCAATAAPAPVTLTKGTSAAHLNSTEVTAEHTPHGTDLSEPATREG---AADGAASRALAAAASSSPs 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 521 --ASSSPPQVTSDTSASISPPQvisdTPASSSPPQVTSETP--ASSSPTNMTSDT-PASSSPTNMTSDTPASSSPTNMTS 595
Cdd:pfam17823 125 saAQSLPAAIAALPSEAFSAPR----AAACRANASAAPRAAiaAASAPHAASPAPrTAASSTTAASSTTAASSAPTTAAS 200
|
170
....*....|....*..
gi 1039789998 596 DTPASSSPPWPVITEVT 612
Cdd:pfam17823 201 SAPATLTPARGISTAAT 217
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
232-643 |
1.26e-11 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 70.01 E-value: 1.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 232 DTLASSSPPQGTSDTPASSSPPQvtsatsasssppqgTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSAT 311
Cdd:PRK07764 379 ERLERRLGVAGGAGAPAAAAPSA--------------AAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSP 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 312 SASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQGTLDTPSSSSPPQGTSDTPA-SSSPPQ------ 384
Cdd:PRK07764 445 AGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATlRERWPEilaavp 524
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 385 -------GTSETPASNSPPQGTSETPGFSSPP------QVTTATLVSSSPPQVTSET----------PASSSPTQVTSET 441
Cdd:PRK07764 525 krsrktwAILLPEATVLGVRGDTLVLGFSTGGlarrfaSPGNAEVLVTALAEELGGDwqveavvgpaPGAAGGEGPPAPA 604
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 442 PASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPA 521
Cdd:PRK07764 605 SSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPA 684
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 522 SSSPPQVtsdTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTP---------ASSSPTN 592
Cdd:PRK07764 685 PAPAAPA---APAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPddppdpagaPAQPPPP 761
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1039789998 593 MTSDTPASSSPPWPVITEVTRPESTIPAGRSLANITSKAQEDSPLGVISTH 643
Cdd:PRK07764 762 PAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVAMELLEEE 812
|
|
| DUF2967 |
pfam11179 |
Protein of unknown function (DUF2967); This family of proteins with unknown function appears ... |
353-774 |
1.58e-11 |
|
Protein of unknown function (DUF2967); This family of proteins with unknown function appears to be restricted to Drosophila.
Pssm-ID: 402654 [Multi-domain] Cd Length: 954 Bit Score: 70.06 E-value: 1.58e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 353 SSSPPQGTLDTPSSSsPPQGTSDTPASSSPPQGTSET--PASNSPPQGTSETPgfSSPPQVTTATLVSSSPPQVTSetpa 430
Cdd:pfam11179 15 SSAPPHAALAGPITA-APTGAAAAAATSTAAASAASStiTAPGAGPGGTPTSR--SRGAQAMTASLAHAAQGNANA---- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 431 ssspTQVTSETPASSSPTQVTSDTPAsnsppqgtsdtpGFSSptqVTTATLVSSSPPQVTSDTpaSSSPPQvtsdTPASS 510
Cdd:pfam11179 88 ----NKSTRNNSNSSNNNGKPKPLAA------------CYMS---TRSAAMMALALGQQSGEK--KDKKPA----AGKAA 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 511 SPPQVTSETPASSSPPQvTSDTSASISPPQVISDTPASSSPPQV-----TSETPASSSPTNMTSDTPASSSPTNMTSDTP 585
Cdd:pfam11179 143 SPAQSQSQSQSQNASPH-TNNRAVSMTRPAATRRLPNAAAMSNVnaansTCTATATSLPSNRARSKPSTPTATRAAAQLN 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 586 AS---SSPTNMT-SDTPASSSPPWPVITEVTRpeSTIPAGRSLAN-ITSKAQEDSPLGVISTHP-----QMSFQSSTSQQ 655
Cdd:pfam11179 222 GMgifSGGSNSSgSDNDGFSASGSSAATALRR--LYFKSGRSIKNkINASTSSSTPLNGLPLNAvsnafHNSVGGATAMH 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 656 ALDETAGerVP----------TIPDFQAHSEFQKACAILqrlrdflpTSPTSAQVSVANLLIDLSEqllvlpfqknNSWS 725
Cdd:pfam11179 300 AMGTAGG--VPklvvmgtssaSIPDTTINTSTDSACTLI--------TNVTHTDTSETCDSLDLGD----------NSGP 359
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1039789998 726 SQtPAVSCPFQPLgrLTTTEksshqmaqqdmeqhpMDGAHNAFGISAGG 774
Cdd:pfam11179 360 SE-PLFSSLEEPL--LTAIH---------------IDSEHEGFGGMAGG 390
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
352-604 |
1.73e-11 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 68.66 E-value: 1.73e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 352 ASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQvTSETPAS 431
Cdd:pfam13254 58 PGLSPTKLSREGSPESTSRPSSSHSEATIVRHSKDDERPSTPDEGFVKPALPRHSRSSSALSNTGSEEDSPS-LPTSPPS 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 432 SSPTQVT---SETPAS---------SSPTQvtSDTPASNSPP------------QGTSDTPGFSSPTQVTTATLVSSSPP 487
Cdd:pfam13254 137 PSKTMDPkrwSPTKSSwlesalnrpESPKP--KAQPSQPAQPawmkelnkirqsRASVDLGRPNSFKEVTPVGLMRSPAP 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 488 QVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTS--ASISPPQVISDTPASS-----SPPQVTSETPA 560
Cdd:pfam13254 215 GGHSKSPSVSGISADSSPTKEEPSEEADTLSTDKEQSPAPTSASEPppKTKELPKDSEEPAAPSksaeaSTEKKEPDTES 294
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1039789998 561 SSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSPP 604
Cdd:pfam13254 295 SPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSPKPKPQSPP 338
|
|
| SPT5 |
COG5164 |
Transcription elongation factor SPT5 [Transcription]; |
203-665 |
1.84e-11 |
|
Transcription elongation factor SPT5 [Transcription];
Pssm-ID: 444063 [Multi-domain] Cd Length: 495 Bit Score: 68.90 E-value: 1.84e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 203 PIDPASSAPPKATHRMTITSLTGRPQVTSDTLASSSPPQGTSDTPA----SSSPPQvtsatsasssppQGTSDTPA---- 274
Cdd:COG5164 3 LYGPGKTGPSDPGGVTTPAGSQGSTKPAQNQGSTRPAGNTGGTRPAqnqgSTTPAG------------NTGGTRPAgnqg 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 275 SSSPPQvtsatsasssppqGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASS 354
Cdd:COG5164 71 ATGPAQnqg--------gtTPAQNQGGTRPAGNTGGTTPAGDGGATGPPDDGGATGPPDDGGSTTPPSGGSTTPPGDGGS 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 355 SPPQGTLDTPSSSSPPQGtsDTPASSSPPQGTSETPA----SNSPPQGTSETPGfssPPQVTTATLVSSSPPQVTSETPA 430
Cdd:COG5164 143 TPPGPGSTGPGGSTTPPG--DGGSTTPPGPGGSTTPPddggSTTPPNKGETGTD---IPTGGTPRQGPDGPVKKDDKNGK 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 431 SSSPTQVTSETPAsSSPTQVTSdtPASNSPPQGTSDTPGFSSPTQvttatlvSSSPPQVTSDTPASSSPPQVTSDTPASS 510
Cdd:COG5164 218 GNPPDDRGGKTGP-KDQRPKTN--PIERRGPERPEAAALPAELTA-------LEAENRAANPEPATKTIPETTTVKDLAT 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 511 SPPQVTSETPASS------SPPQVTSDTsasiSPPQVISDTpassspPQVTSETPASSSPT-NMTSDTPASSSPTNMTSD 583
Cdd:COG5164 288 VLGKKGSDLVTNLmkkgkgTNINAALDF----ETAATIALE------GNVITEKEIEADIMeTVTTEEQETDSLLEETPP 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 584 TPasssPTNMTSDTPASSSPPWPVITEVTRPESTIP-----AGRSLANITSKAQEDSPLGVISTHPQMSFQSSTSQQALD 658
Cdd:COG5164 358 VP----VVMGHVDHGKTSLLDAIRHSDVTDGEVGTIsqhigAYTVQIAGTPITFLDTPGFESFTAMAMRVAQITDIAILV 433
|
....*..
gi 1039789998 659 ETAGERV 665
Cdd:COG5164 434 VAADDGD 440
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
364-621 |
2.25e-11 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 69.18 E-value: 2.25e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 364 PSSSSPPQGT--SDTPASSSPPQGTSETPASNS---PPQGTSETPGFSSPpqvtTATLVSSSPPqvTSETPASssptqvT 438
Cdd:PLN03209 324 PSQRVPPKESdaADGPKPVPTKPVTPEAPSPPIeeePPQPKAVVPRPLSP----YTAYEDLKPP--TSPIPTP------P 391
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 439 SETPASSSPTQVTS--DTPASNSPPQGTSDTPGfSSPTQVTTATLVSSSPPQVTSDTPASSSPpqvtSDTPASSSPPQVT 516
Cdd:PLN03209 392 SSSPASSKSVDAVAkpAEPDVVPSPGSASNVPE-VEPAQVEAKKTRPLSPYARYEDLKPPTSP----SPTAPTGVSPSVS 466
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 517 SETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPA-SSSPTNMTS 595
Cdd:PLN03209 467 STSSVPAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSApPTALADEQH 546
|
250 260
....*....|....*....|....*...
gi 1039789998 596 DTPASSSP--PWPVITEVTRPESTIPAG 621
Cdd:PLN03209 547 HAQPKPRPlsPYTMYEDLKPPTSPTPSP 574
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
417-595 |
4.52e-11 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 67.38 E-value: 4.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 417 VSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTpgfssptqvTTATLVSSSPPQVTSDTPAS 496
Cdd:pfam05539 157 LRGKDVSCCKEPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTA---------TANQRLSSTEPVGTQGTTTS 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 497 SSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQvisDTPASSSPPQVTSETPASSSPTNMTSDTPASSS 576
Cdd:pfam05539 228 SNPEPQTEPPPSQRGPSGSPQHPPSTTSQDQSTTGDGQEHTQRR---KTPPATSNRRSPHSTATPPPTTKRQETGRPTPR 304
|
170 180
....*....|....*....|....*
gi 1039789998 577 PTNMT--SDTPASSSPT----NMTS 595
Cdd:pfam05539 305 PTATTqsGSSPPHSSPPgvqaNPTT 329
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
438-608 |
1.60e-10 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 63.38 E-value: 1.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 438 TSETPASSSPTQVTSDTPAsnsppqgTSDTPGFSSPTQVTTATLVSSSPPqVTSDTPASSSPPQVTSdTPASSSPPQVTS 517
Cdd:PHA03255 25 TSSGSSTASAGNVTGTTAV-------TTPSPSASGPSTNQSTTLTTTSAP-ITTTAILSTNTTTVTS-TGTTVTPVPTTS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 518 ETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDT 597
Cdd:PHA03255 96 NASTINVTTKVTAQNITATEAGTGTSTGVTSNVTTRSSSTTSATTRITNATTLAPTLSSKGTSNATKTTAELPTVPDERQ 175
|
170
....*....|...
gi 1039789998 598 PASSS--PPWPVI 608
Cdd:PHA03255 176 PSLSYglPLWTLV 188
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
183-624 |
1.62e-10 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 66.63 E-value: 1.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 183 PPLAMCHQPAPPELFETLCFPID-PASSAPPKAThrmtITSLTGRPQVTSDTLASSSPPQGTSDTPASSSPPQVTSATSA 261
Cdd:PHA03378 529 PPQPRAGRRAPCVYTEDLDIESDePASTEPVHDQ----LLPAPGLGPLQIQPLTSPTTSQLASSAPSYAQTPWPVPHPSQ 604
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 262 SSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDT-------PASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVT 334
Cdd:PHA03378 605 TPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPItfnvlvfPTPHQPPQVEITPYKPTWTQIGHIPYQPSPTGANTM 684
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 335 SATSASSSPPQGTSDTPASSSPPQGtldTPSSSSPPQGtsdTPASSSPPQGtseTPASNSPPQGtseTPGFSSPPQvttA 414
Cdd:PHA03378 685 LPIQWAPGTMQPPPRAPTPMRPPAA---PPGRAQRPAA---ATGRARPPAA---APGRARPPAA---APGRARPPA---A 749
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 415 TLVSSSPPQvtsetpASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGtsdTPGFSSPTQVTTATLVSSSPPQVTSDTP 494
Cdd:PHA03378 750 APGRARPPA------AAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRG---APTPQPPPQAGPTSMQLMPRAAPGQQGP 820
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 495 ASSSPPQ-----VTSDTPASSSPPQVTSETPASSSP-PQvtSDTSASISPPQVIsdTPASSSPPQVtsetpasssPTNMT 568
Cdd:PHA03378 821 TKQILRQlltggVKRGRPSLKKPAALERQAAAGPTPsPG--SGTSDKIVQAPVF--YPPVLQPIQV---------MRQLG 887
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039789998 569 SDTPASSSptnmtsdtPASSSPTNMTSDTPASSSPPWPVITEVTR------PESTIPAGRSL 624
Cdd:PHA03378 888 SVRAAAAS--------TVTQAPTEYTGERRGVGPMHPTDIPPSKRaktdayVESQPPHGGQS 941
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
347-677 |
2.95e-10 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 65.79 E-value: 2.95e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 347 TSDTPASSSPPQGTLDTPSSSSPPQGTS------DTPassSPPQGTSE-TPAS----NSP-PQGT----SETPgfSSPPQ 410
Cdd:TIGR00927 76 SSDPPKSSSEMEGEMLAPQATVGRDEATpsiameNTP---SPPRRTAKiTPTTpknnYSPtAAGTervkEDTP--ATPSR 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 411 VTTATLVSSSPPQVTSETPA------SSSPTQVTSE----TPaSSSPTQVTSDTPAS-NSPPQGTSDTPGFSSPTQVTTA 479
Cdd:TIGR00927 151 ALNHYISTSGRQRVKSYTPKprgevkSSSPTQTREKvrkyTP-SPLGRMVNSYAPSTfMTMPRSHGITPRTTVKDSEITA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 480 T---LVSSSPPQV---TSDTP----ASSSPPQVTSDTPAS--SSPPQVTsETPASSSPPQVTSDTSA---------SISP 538
Cdd:TIGR00927 230 TykmLETNPSKRTagkTTPTPlkgmTDNTPTFLTREVETDllTSPRSVV-EKNTLTTPRRVESNSSTnhwglvgknNLTT 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 539 PQ--VISDTPASSSPpQVTSETPASSSPTnmtsDTPASSSPTNMTSDTPASSSPTNMTsdtpaSSSPPWPVITEVTRPES 616
Cdd:TIGR00927 309 PQgtVLEHTPATSEG-QVTISIMTGSSPA----ETKASTAAWKIRNPLSRTSAPAVRI-----ASATFRGLEKNPSTAPS 378
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1039789998 617 TIPAGRSLANITSKAQE---DSPLGVISTHPQMSFQSSTSQQALDETAGERVPTIPDFQAHSEF 677
Cdd:TIGR00927 379 TPATPRVRAVLTTQVHHcvvVKPAPAVPTTPSPSLTTALFPEAPSPSPSALPPGQPDLHPKAEY 442
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
420-634 |
4.76e-10 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 64.56 E-value: 4.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 420 SPPQ-VTSETPASSSPTQVTSETPASssptqvtsdtPASNSPPQGTSDTPGFSSPTqvttATLVSSSPPQVTSDTPASSS 498
Cdd:PLN03209 329 PPKEsDAADGPKPVPTKPVTPEAPSP----------PIEEEPPQPKAVVPRPLSPY----TAYEDLKPPTSPIPTPPSSS 394
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 499 PPQVTS-------DTPASSSPPQVTSETPASSsPPQVTSDTSASISPPQVISD--TPASSSP-PQVTSETPASSSPT-NM 567
Cdd:PLN03209 395 PASSKSvdavakpAEPDVVPSPGSASNVPEVE-PAQVEAKKTRPLSPYARYEDlkPPTSPSPtAPTGVSPSVSSTSSvPA 473
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039789998 568 TSDTPASSSPTNMTSDTPASSSPTNMTS-----DTPASSSPPWPVITEVTRPESTIPAGRSLANITSKAQED 634
Cdd:PLN03209 474 VPDTAPATAATDAAAPPPANMRPLSPYAvyddlKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQ 545
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
364-577 |
7.85e-10 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 63.53 E-value: 7.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 364 PSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETpgfssppqvTTATLVSSSPPQVTSETPASSSPTQVTSETPA 443
Cdd:pfam05539 169 KTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTA---------TANQRLSSTEPVGTQGTTTSSNPEPQTEPPPS 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 444 SSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVT-------TATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQvT 516
Cdd:pfam05539 240 QRGPSGSPQHPPSTTSQDQSTTGDGQEHTQRRKTppatsnrRSPHSTATPPPTTKRQETGRPTPRPTATTQSGSSPPH-S 318
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039789998 517 SETPASSSPPQVTSDTSASISPPQVIS-----DTPASSSPPQVTSETPASSSPTNMTSDTPASSSP 577
Cdd:pfam05539 319 SPPGVQANPTTQNLVDCKELDPPKPNSicygvGIYNEALPRGCDIVVPLCSTYTIMCMDTYYSKPF 384
|
|
| Hamartin |
pfam04388 |
Hamartin protein; This family includes the hamartin protein which is thought to function as a ... |
417-681 |
8.83e-10 |
|
Hamartin protein; This family includes the hamartin protein which is thought to function as a tumour suppressor. The hamartin protein interacts with the tuberin protein pfam03542. Tuberous sclerosis complex (TSC) is an autosomal dominant disorder and is characterized by the presence of hamartomas in many organs, such as brain, skin, heart, lung, and kidney. It is caused by mutation either TSC1 or TSC2 tumour suppressor gene. TSC1 encodes a protein, hamartin, containing two coiled-coil regions, which have been shown to mediate binding to tuberin. The TSC2 gene codes for tuberin pfam03542. These two proteins function within the same pathway(s) regulating cell cycle, cell growth, adhesion, and vesicular trafficking.
Pssm-ID: 461287 [Multi-domain] Cd Length: 730 Bit Score: 63.92 E-value: 8.83e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 417 VSSSPPqvTSETPASSSPTQVTSETP-ASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQV-TSDTP 494
Cdd:pfam04388 276 PTASPY--TDQQSSYGSSTSTPSSTPrLQLSSSSGTSPPYLSPPSIRLKTDSFPLWSPSSVCGMTTPPTSPGMVpTTPSE 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 495 ASSSPPQVTSDtpaSSSPPQVTSE-----TPASSSPPQVTSDTSASISPPQVISDTPASSSPPQvTSETPASSSP----- 564
Cdd:pfam04388 354 LSPSSSHLSSR---GSSPPEAAGEatpetTPAKDSPYLKQPPPLSDSHVHRALPASSQPSSPPR-KDGRSQSSFPplskq 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 565 --TNMTSDTPASSSPTNMTSDTpasSSPTNMTSDTpaSSSPPWPVITEVTRPESTipagRSLANITSKAQEdsplgviST 642
Cdd:pfam04388 430 apTNPNSRGLLEPPGDKSSVTL---SELPDFIKDL--ALSSEDSVEGAEEEAAIS----QELSEITTEKNE-------TD 493
|
250 260 270
....*....|....*....|....*....|....*....
gi 1039789998 643 HPQMSFQSSTSQQALDETAGERVPTIPDFQAHSEFQKAC 681
Cdd:pfam04388 494 CSRGGLDMPFSRTMESLAGSQRSRNRIASYCSSTSQSDS 532
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1952-2143 |
1.04e-09 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 61.13 E-value: 1.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 1952 RLAFFTRKRNLLDTSIVLISFSILGLSMQSLSLLhkkmqqyhcdrdrfisfyeaLRVnsavthLRGFLLLfatvRVWDLL 2031
Cdd:pfam00520 60 KKRYFRSPWNILDFVVVLPSLISLVLSSVGSLSG--------------------LRV------LRLLRLL----RLLRLI 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 2032 RHHAQLQVINKTLSKAWDEVLGFILIIVVLLSSYAMTFNLLFG----------WSISDYQSFFRSIVTVVGLL----MGT 2097
Cdd:pfam00520 110 RRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGgklktwenpdNGRTNFDNFPNAFLWLFQTMttegWGD 189
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1039789998 2098 SKHKEVIALYPILGSLLVLSSIILMGLVIINLFVSAILIAFGKERK 2143
Cdd:pfam00520 190 IMYDTIDGKGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
345-514 |
1.21e-09 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 62.76 E-value: 1.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 345 QGTSDTPASSSPPQGTLDTPSSSSPPQG----TSDTPASSSPPQGTSETPASNSPPQGTseTPGFSSPPQVTTATLVSSS 420
Cdd:pfam05539 176 KTTSWPTEVSHPTYPSQVTPQSQPATQGhqtaTANQRLSSTEPVGTQGTTTSSNPEPQT--EPPPSQRGPSGSPQHPPST 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 421 PPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSdtpgfSSPTQVTTATLVSSSPPQVTSDTPASSSPP 500
Cdd:pfam05539 254 TSQDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQET-----GRPTPRPTATTQSGSSPPHSSPPGVQANPT 328
|
170
....*....|....
gi 1039789998 501 QVTSDTPASSSPPQ 514
Cdd:pfam05539 329 TQNLVDCKELDPPK 342
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
360-596 |
1.90e-09 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 62.88 E-value: 1.90e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 360 TLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNsppqgTSETPgfssppQVTTATLVSSSPPQVTSETPASSSP-TQVT 438
Cdd:PRK08581 14 TLVLPTLTSPTAYADDPQKDSTAKTTSHDSKKSN-----DDETS------KDTSSKDTDKADNNNTSNQDNNDKKfSTID 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 439 SETPASS---SPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQvTSDTPASSSPPQVTSDTPASSSPPqv 515
Cdd:PRK08581 83 SSTSDSNniiDFIYKNLPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISD-YEQPRNSEKSTNDSNKNSDSSIKN-- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 516 tSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTS 595
Cdd:PRK08581 160 -DTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSE 238
|
.
gi 1039789998 596 D 596
Cdd:PRK08581 239 D 239
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
377-593 |
2.57e-09 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 61.11 E-value: 2.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 377 PASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQV-TSETPASSSPTQVTSDTP 455
Cdd:PRK10905 23 PSTSSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAEQTAGNTQQDVSLPPISSTPTQGqTPVATDGQQRVEVQGDLN 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 456 ASNSPPQGTSDTPGFSS----PTQVTT-----------ATLVSSSPPQVTSDTPA------SSSPPQVTSDTPASSSPPQ 514
Cdd:PRK10905 103 NALTQPQNQQQLNNVAVnstlPTEPATvapvrngnasrQTAKTQTAERPATTRPArkqaviEPKKPQATAKTEPKPVAQT 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 515 VTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPT--NMTSDTPASSSptNMTSDTPASSSPTN 592
Cdd:PRK10905 183 PKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTagNVGSLKSAPSS--HYTLQLSSSSNYDN 260
|
.
gi 1039789998 593 M 593
Cdd:PRK10905 261 L 261
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
203-657 |
4.95e-09 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 61.99 E-value: 4.95e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 203 PIDPASSAPPKATHRMTITSLTGRPQVTSDTLASSSPPQGTSDTPASSSPPQ---VTSATSASSSPPQGTSDTPASSSPP 279
Cdd:PHA03377 450 PERPGPSDQPSVPVEPAHLTPVEHTTVILHQPPQSPPTVAIKPAPPPSRRRRgacVVYDDDIIEVIDVETTEEEESVTQP 529
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 280 QVTSATSASSSPPQGTSD--------TPASSSPPQVTSATSASSSPPQGTSDTPASSspPQVTSATSASSSPPQGTSDTP 351
Cdd:PHA03377 530 AKPHRKVQDGFQRSGRRQkratppkvSPSDRGPPKASPPVMAPPSTGPRVMATPSTG--PRDMAPPSTGPRQQAKCKDGP 607
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 352 ASSSPPQgtlDTPSSSSP-----------------PQGTSDTPAS------SSPPQGTSETPASNSPPQGTSETPGFSSP 408
Cdd:PHA03377 608 PASGPHE---KQPPSSAPrdmapsvvrmflrerllEQSTGPKPKSfwemraGRDGSGIQQEPSSRRQPATQSTPPRPSWL 684
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 409 PQVTTATLVSSSPPQVTSETPASS-SPTQVTS--ETPASSSPTQVT--SDTPASNSPPQGTSDTPGFSSP--TQVTTATL 481
Cdd:PHA03377 685 PSVFVLPSVDAGRAQPSEESHLSSmSPTQPISheEQPRYEDPDDPLdlSLHPDQAPPPSHQAPYSGHEEPqaQQAPYPGY 764
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 482 VSSSPPQV--------------TSDTPASSSPPQVTSDTPASSSPPQVTSETPAsSSPPQVTSDTSASISPPQviSDTPA 547
Cdd:PHA03377 765 WEPRPPQApylgyqepqaqgvqVSSYPGYAGPWGLRAQHPRYRHSWAYWSQYPG-HGHPQGPWAPRPPHLPPQ--WDGSA 841
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 548 SSSPPQVTSETPASSSPTNMTSDTpaSSSPTNMTSDTPASSSPTNMTSDTPASSSPPWPvitevTR-PESTIPAGRSLAn 626
Cdd:PHA03377 842 GHGQDQVSQFPHLQSETGPPRLQL--SQVPQLPYSQTLVSSSAPSWSSPQPRAPIRPIP-----TRfPPPPMPLQDSMA- 913
|
490 500 510
....*....|....*....|....*....|.
gi 1039789998 627 itskAQEDSPLgviSTHPQMSFQSSTSQQAL 657
Cdd:PHA03377 914 ----VGCDSSG---TACPSMPFASDYSQGAF 937
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
464-622 |
6.10e-09 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 58.76 E-value: 6.10e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 464 TSDTPGFSSPTQVTTATlvsssppQVTSDTPASSSPPQVTSDTPASSSPPqVTSETPASSSPPQVTSdTSASISPPQVIS 543
Cdd:PHA03255 25 TSSGSSTASAGNVTGTT-------AVTTPSPSASGPSTNQSTTLTTTSAP-ITTTAILSTNTTTVTS-TGTTVTPVPTTS 95
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1039789998 544 DTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSPPWPVITEVTRPESTIPAGR 622
Cdd:PHA03255 96 NASTINVTTKVTAQNITATEAGTGTSTGVTSNVTTRSSSTTSATTRITNATTLAPTLSSKGTSNATKTTAELPTVPDER 174
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
425-588 |
7.42e-09 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 58.38 E-value: 7.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 425 TSETPASSSPTQVTSETpASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTS-DTPASSSPPQVT 503
Cdd:PHA03255 25 TSSGSSTASAGNVTGTT-AVTTPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTVTSTGTTVTPvPTTSNASTINVT 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 504 SDTPASSSppqVTSETPASSSPPQVTSDTSasisppQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSD 583
Cdd:PHA03255 104 TKVTAQNI---TATEAGTGTSTGVTSNVTT------RSSSTTSATTRITNATTLAPTLSSKGTSNATKTTAELPTVPDER 174
|
....*
gi 1039789998 584 TPASS 588
Cdd:PHA03255 175 QPSLS 179
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
437-659 |
8.36e-09 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 59.10 E-value: 8.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 437 VTSETPAS--SSPTQVTSDTPASNSPPQGTSDTPG----------FSSPTQVTTATLVSSSPPQVTSDTPASSSP-PQVT 503
Cdd:PHA02682 17 VLADTSSSlfTKCPQATIPAPAAPCPPDADVDPLDkysvkeagryYQSRLKANSACMQRPSGQSPLAPSPACAAPaPACP 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 504 SDTPASSSPpQVTSETPASSSPPQvtsdTSASISPPQVISDT--PASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMT 581
Cdd:PHA02682 97 ACAPAAPAP-AVTCPAPAPACPPA----TAPTCPPPAVCPAParPAPACPPSTRQCPPAPPLPTPKPAPAAKPIFLHNQL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 582 S--DTPASSSPTNMTSdtPASSsppwPVItEVTRPESTIPAGRSLANITSKAQEDSPLGV-------ISTHPQMSFQSST 652
Cdd:PHA02682 172 PppDYPAASCPTIETA--PAAS----PVL-EPRIPDKIIDADNDDKDLIKKELADIADSVrdlnaesLSLTRDIENAKST 244
|
....*..
gi 1039789998 653 SQQALDE 659
Cdd:PHA02682 245 TQAAIDD 251
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
479-668 |
8.39e-09 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 60.36 E-value: 8.39e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 479 ATLVSSSPPQVTSDTPASS-SPPQVTSDTpassSPPQVTSETPASSSPpqvTSDTSASISPPqvisdTPASSSPPQVTSE 557
Cdd:pfam17823 62 AATAAPAPVTLTKGTSAAHlNSTEVTAEH----TPHGTDLSEPATREG---AADGAASRALA-----AAASSSPSSAAQS 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 558 TPASSS-PTNMTSDTPASSSPTnmTSDTPASSSPTNMTSDTPASSSPPWPVITEVTRPESTIPAGRSLANITSKAqedsP 636
Cdd:pfam17823 130 LPAAIAaLPSEAFSAPRAAACR--ANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSA----P 203
|
170 180 190
....*....|....*....|....*....|..
gi 1039789998 637 LGVISTHPQMSFQSSTSQQALDeTAGERVPTI 668
Cdd:pfam17823 204 ATLTPARGISTAATATGHPAAG-TALAAVGNS 234
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
402-705 |
1.10e-08 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 60.19 E-value: 1.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 402 TPGFSSPpQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSsptqvTSDTPASNSPPQGTSDTPgFSSPTQVTTAT- 480
Cdd:PRK08581 17 LPTLTSP-TAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKD-----TDKADNNNTSNQDNNDKK-FSTIDSSTSDSn 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 481 ---------LVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTS-ETPASSS-PPQVTSDTSAS-ISPPQvisdTPAS 548
Cdd:PRK08581 90 niidfiyknLPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDyEQPRNSEkSTNDSNKNSDSsIKNDT----DTQS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 549 SSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSppwpvitevtrpESTIPAGRSLANIT 628
Cdd:PRK08581 166 SKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDTANQKSSSK------------DNQSMSDSALDSIL 233
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1039789998 629 SKAQEDSPLgvisTHPQMSFQSSTSQQaldETAGERVPTIPdfqAHSEFQKACAILQRLRDFLPTSPTSAQVSVANL 705
Cdd:PRK08581 234 DQYSEDAKK----TQKDYASQSKKDKT---ETSNTKNPQLP---TQDELKHKSKPAQSFENDVNQSNTRSTSLFETG 300
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
203-502 |
1.25e-08 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 59.97 E-value: 1.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 203 PIDPASSAPPKATHRMTITSLTGRPQVTSDTLASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVT 282
Cdd:pfam17823 153 NASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVG 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 283 SATSASssppqGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPpQVTSATSASSSPPQGTSDTPASSSPPQgtld 362
Cdd:pfam17823 233 NSSPAA-----GTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDP-HARRLSPAKHMPSDTMARNPAAPMGAQ---- 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 363 tpSSSSPPQGTSDTPASSSPPQGTSEtpasnspPQGTSETPGFSSPPQVTTATLVSSSPPQvTSETPASSSPTQVTSETP 442
Cdd:pfam17823 303 --AQGPIIQVSTDQPVHNTAGEPTPS-------PSNTTLEPNTPKSVASTNLAVVTTTKAQ-AKEPSASPVPVLHTSMIP 372
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1039789998 443 --ASSSPTQVTSDTPasnsPPQGTSDTPGFSSPTQVTT-ATLVSSSppqvTSDTPASSSPPQV 502
Cdd:pfam17823 373 evEATSPTTQPSPLL----PTQGAAGPGILLAPEQVATeATAGTAS----AGPTPRSSGDPKT 427
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
382-577 |
1.47e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 60.25 E-value: 1.47e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 382 PPQGTSETPASNSPPQGTSETPGfsSPPQVTTATLVSSSPPQvtseTPASSSPTQVTSETPASSSPTQVTSDTPASNSPP 461
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGAVPA--PGARAAAAVGASAVPAV----TAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPP 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 462 Q-GTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSE-TPASSSPPQVTSDTSASISPP 539
Cdd:PRK07003 434 AtADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEpAPRAAAPSAATPAAVPDARAP 513
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1039789998 540 QVIS--DTPASSSPPqvtseTPASSSPTnmtsdtPASSSP 577
Cdd:PRK07003 514 AAASreDAPAAAAPP-----APEARPPT------PAAAAP 542
|
|
| PLAT_plant_stress |
cd01754 |
PLAT/LH2 domain of plant-specific single domain protein family with unknown function. Many of ... |
1152-1256 |
1.56e-08 |
|
PLAT/LH2 domain of plant-specific single domain protein family with unknown function. Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Pssm-ID: 238852 Cd Length: 129 Bit Score: 55.24 E-value: 1.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 1152 YLIQVYTGYRRRAATTAKVVITLYGSEGH-------SEPHHLCDPEKTVFERGALDVF------LLSTGSWLgdlhglRL 1218
Cdd:cd01754 3 YTIYVQTGSIWKAGTDSRISLQIYDADGPglrianlEAWGGLMGAGHDYFERGNLDRFsgrgpcLPSPPCWM------NL 76
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1039789998 1219 WHDNSGDSPSWYVSQVIVsdmtTRKKWHFQCNC-------WLAVD 1256
Cdd:cd01754 77 TSDGTGNHPGWYVNYVEV----TQAGQHAPCMQhlfaveqWLATD 117
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
167-658 |
1.67e-08 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 60.07 E-value: 1.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 167 KRRGAETERHMIP-----GNGPPLAMCHQPAPPElfetlcfpIDPASSAPPKATHRMTITSLTGRPQVTSdtLASSSPPQ 241
Cdd:PHA03377 541 QRSGRRQKRATPPkvspsDRGPPKASPPVMAPPS--------TGPRVMATPSTGPRDMAPPSTGPRQQAK--CKDGPPAS 610
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 242 GTSD-TPASSSP----PQVTSATSASSSPPQGTSDTP-------ASSSPPQVTSATSASSSPPQgTSDTPASSSPPQVTS 309
Cdd:PHA03377 611 GPHEkQPPSSAPrdmaPSVVRMFLRERLLEQSTGPKPksfwemrAGRDGSGIQQEPSSRRQPAT-QSTPPRPSWLPSVFV 689
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 310 ATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQGTLdtPSSSSPPQGTSDTPASSSPPQGTSET 389
Cdd:PHA03377 690 LPSVDAGRAQPSEESHLSSMSPTQPISHEEQPRYEDPDDPLDLSLHPDQAPP--PSHQAPYSGHEEPQAQQAPYPGYWEP 767
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 390 PASNSPPQGTSETPGfssppqvtTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPG 469
Cdd:PHA03377 768 RPPQAPYLGYQEPQA--------QGVQVSSYPGYAGPWGLRAQHPRYRHSWAYWSQYPGHGHPQGPWAPRPPHLPPQWDG 839
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 470 FSSPTQvttaTLVSSSPPqVTSDTpassSPPqvtsdTPASSSPPQVT-SETPASSSPPqvtsdtsasisppqvisdtPAS 548
Cdd:PHA03377 840 SAGHGQ----DQVSQFPH-LQSET----GPP-----RLQLSQVPQLPySQTLVSSSAP-------------------SWS 886
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 549 SSPPqvtsETPASSSPTNM-TSDTPASSSPTnMTSDTPASSSPtNMTSDTPASSSPPWPVITEVTRPESTIPAGRSLANI 627
Cdd:PHA03377 887 SPQP----RAPIRPIPTRFpPPPMPLQDSMA-VGCDSSGTACP-SMPFASDYSQGAFTPLDINAQTPKRPRVEESSHGPA 960
|
490 500 510
....*....|....*....|....*....|..
gi 1039789998 628 TSKAQEDSPLGVISTHPQMS-FQSSTSQQALD 658
Cdd:PHA03377 961 RCSQATTEAQEILSDNSEISvFPKDAKQTDYD 992
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
269-487 |
1.69e-08 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 59.77 E-value: 1.69e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 269 TSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSasssppqGTS 348
Cdd:COG3469 1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTA-------ATS 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 349 DTPASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPqgtseTPGFSSPPQVTTATLVSSSP-PQVTSE 427
Cdd:COG3469 74 STTSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGS-----VTSTTSSTAGSTTTSGASATsSAGSTT 148
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1039789998 428 TPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGF-----SSPTQVTTATLVSSSPP 487
Cdd:COG3469 149 TTTTVSGTETATGGTTTTSTTTTTTSASTTPSATTTATATTASgattpSATTTATTTGPPTPGLP 213
|
|
| Metaviral_G |
pfam09595 |
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. ... |
443-595 |
2.45e-08 |
|
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. It is high in serine and threonine suggesting it is highly glycosylated.
Pssm-ID: 462833 [Multi-domain] Cd Length: 183 Bit Score: 56.12 E-value: 2.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 443 ASSSPTQVTSDTPASNSppqgtSDTPGFSSPTQVTTATLVSSSPPqvtsdTPASSSPPQVTSDTPASSSPPQVTSETPAS 522
Cdd:pfam09595 31 ASLILIGESNKEAALII-----TDIIDININKQHPEQEHHENPPL-----NEAAKEAPSESEDAPDIDPNNQHPSQDRSE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 523 SSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSS----PTNMTSDTPAS----SSPTNMTSDTPASSSPTNMT 594
Cdd:pfam09595 101 APPLEPAAKTKPSEHEPANPPDASNRLSPPDASTAAIREARtfrkPSTGKRNNPSSaqsdQSPPRANHEAIGRANPFAMS 180
|
.
gi 1039789998 595 S 595
Cdd:pfam09595 181 S 181
|
|
| Metaviral_G |
pfam09595 |
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. ... |
406-569 |
2.66e-08 |
|
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. It is high in serine and threonine suggesting it is highly glycosylated.
Pssm-ID: 462833 [Multi-domain] Cd Length: 183 Bit Score: 55.73 E-value: 2.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 406 SSPPQVTT--ATLVSSSPPQVTsetPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVS 483
Cdd:pfam09595 33 LILIGESNkeAALIITDIIDIN---INKQHPEQEHHENPPLNEAAKEAPSESEDAPDIDPNNQHPSQDRSEAPPLEPAAK 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 484 SSPpqvTSDTPASssppqvTSDTPASSSPPQVTSETPASSsppqvTSDTSASISPPQVISDTPASSSPPQVTSETPASSS 563
Cdd:pfam09595 110 TKP---SEHEPAN------PPDASNRLSPPDASTAAIREA-----RTFRKPSTGKRNNPSSAQSDQSPPRANHEAIGRAN 175
|
....*.
gi 1039789998 564 PTNMTS 569
Cdd:pfam09595 176 PFAMSS 181
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
413-575 |
3.43e-08 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 56.45 E-value: 3.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 413 TATLVSSSPPQVTSETPASSSpTQVTSETPASSSPTQVTSDTPASNSPPQGTsdTPGFSSPTQVTTATLVSSSPPQVTSD 492
Cdd:PHA03255 20 TSLIWTSSGSSTASAGNVTGT-TAVTTPSPSASGPSTNQSTTLTTTSAPITT--TAILSTNTTTVTSTGTTVTPVPTTSN 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 493 TPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTP 572
Cdd:PHA03255 97 ASTINVTTKVTAQNITATEAGTGTSTGVTSNVTTRSSSTTSATTRITNATTLAPTLSSKGTSNATKTTAELPTVPDERQP 176
|
...
gi 1039789998 573 ASS 575
Cdd:PHA03255 177 SLS 179
|
|
| Metaviral_G |
pfam09595 |
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. ... |
366-517 |
3.68e-08 |
|
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. It is high in serine and threonine suggesting it is highly glycosylated.
Pssm-ID: 462833 [Multi-domain] Cd Length: 183 Bit Score: 55.35 E-value: 3.68e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 366 SSSPPqGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASS 445
Cdd:pfam09595 32 SLILI-GESNKEAALIITDIIDININKQHPEQEHHENPPLNEAAKEAPSESEDAPDIDPNNQHPSQDRSEAPPLEPAAKT 110
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039789998 446 SPTQVT----SDTPASNSPPQGTSdtpgfSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTS 517
Cdd:pfam09595 111 KPSEHEpanpPDASNRLSPPDAST-----AAIREARTFRKPSTGKRNNPSSAQSDQSPPRANHEAIGRANPFAMSS 181
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
414-666 |
3.68e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 58.73 E-value: 3.68e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 414 ATLVSSSPPQVTSETPASSSPTQVTsETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSdT 493
Cdd:PRK12323 372 AGPATAAAAPVAQPAPAAAAPAAAA-PAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAP-A 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 494 PASSSPPqvtsdTPASSSPPQVTS-ETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTP 572
Cdd:PRK12323 450 PAPAPAA-----APAAAARPAAAGpRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAE 524
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 573 ASSSPTNMTSDTPASSSptnmtsdTPASSSPPWPVITEVTRPESTIPAGRSLANITSKAQEDSPLGVISTHP------QM 646
Cdd:PRK12323 525 SIPDPATADPDDAFETL-------APAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGDWPALAARLPvrglaqQL 597
|
250 260
....*....|....*....|
gi 1039789998 647 SFQSSTsQQALDETAGERVP 666
Cdd:PRK12323 598 ARQSEL-AGVEGDTVRLRVP 616
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
245-670 |
6.73e-08 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 58.20 E-value: 6.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 245 DTPASSSPPQVtsatsasssppQGTSDTPASSSPPQVtsatsasssPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDT 324
Cdd:PRK14949 369 DDPAEISLPEG-----------QTPSALAAAVQAPHA---------NEPQFVNAAPAEKKTALTEQTTAQQQVQAANAEA 428
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 325 PASSSPPQVTSATSASSSPPQgTSDTPASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPg 404
Cdd:PRK14949 429 VAEADASAEPADTVEQALDDE-SELLAALNAEQAVILSQAQSQGFEASSSLDADNSAVPEQIDSTAEQSVVNPSVTDTQ- 506
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 405 fssppqvttATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSS 484
Cdd:PRK14949 507 ---------VDDTSASNNSAADNTVDDNYSAEDTLESNGLDEGDYAQDSAPLDAYQDDYVAFSSESYNALSDDEQHSANV 577
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 485 SPPQvtsdtpaSSSPPQVTSDTPASSSPPQVTSETPAS--------SSPPQVTSDTSAsISP---------PQVISDTPa 547
Cdd:PRK14949 578 QSAQ-------SAAEAQPSSQSLSPISAVTTAAASLADddildavlAARDSLLSDLDA-LSPkegdgkkssADRKPKTP- 648
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 548 SSSPPQVTSETPASSSPTNMTSDT---PASSSPTNMTSDTPASSSPTNMTSDTPASSS---PPW---PVITEVTRPESTI 618
Cdd:PRK14949 649 PSRAPPASLSKPASSPDASQTSASfdlDPDFELATHQSVPEAALASGSAPAPPPVPDPydrPPWeeaPEVASANDGPNNA 728
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1039789998 619 PAGRSLANI--TSKAQEDSPLGVISTHPQM--SFQSSTSQQALDETAGERVPTIPD 670
Cdd:PRK14949 729 AEGNLSESVedASNSELQAVEQQATHQPQVqaEAQSPASTTALTQTSSEVQDTELN 784
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
349-669 |
7.34e-08 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 57.78 E-value: 7.34e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 349 DTPASSSPPQGtldTPSSSSPPQGTSDTPASSSPPQGTSEtpaSNSPPQGTSetPGFSSPPQVTtatlvssSPPQVTSET 428
Cdd:PTZ00449 503 DSDKHDEPPEG---PEASGLPPKAPGDKEGEEGEHEDSKE---SDEPKEGGK--PGETKEGEVG-------KKPGPAKEH 567
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 429 PASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQ--VTSDT 506
Cdd:PTZ00449 568 KPSKIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPPQrpSSPER 647
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 507 PASSSPPQvTSETPASSSPP-------QVTSDTS-ASISPPQVISDTPASSSPPQVTSETPASSSPTNMTsdTPASSSPT 578
Cdd:PTZ00449 648 PEGPKIIK-SPKPPKSPKPPfdpkfkeKFYDDYLdAAAKSKETKTTVVLDESFESILKETLPETPGTPFT--TPRPLPPK 724
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 579 NMTSDTPASSSPTNMTSDTPASSSPPWPVITEVTRPESTiPAGRSLANITSKAQEDSPLGVISTHPQMSFQSSTSQQALD 658
Cdd:PTZ00449 725 LPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHET-PADTPLPDILAEEFKEEDIHAETGEPDEAMKRPDSPSEHE 803
|
330
....*....|.
gi 1039789998 659 ETAGERVPTIP 669
Cdd:PTZ00449 804 DKPPGDHPSLP 814
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
384-608 |
1.00e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 57.19 E-value: 1.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 384 QGTSETPASNSPPQGTSETPGFSSPPQVTTAtlvSSSPPQVTSETPASSSPTQVTSETPASSSPTQVtSDTPASNSPPQG 463
Cdd:PRK12323 368 SGGGAGPATAAAAPVAQPAPAAAAPAAAAPA---PAAPPAAPAAAPAAAAAARAVAAAPARRSPAPE-ALAAARQASARG 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 464 tsdTPGFSSPTQVTTATLVSSSPPQVTS-DTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVI 542
Cdd:PRK12323 444 ---PGGAPAPAPAPAAAPAAAARPAAAGpRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAG 520
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039789998 543 SDTpASSSPPQVTSETPASSSPTNMTSDTPAsSSPTNMTSDTPASSSPTNMTSDTPASSSPPWPVI 608
Cdd:PRK12323 521 WVA-ESIPDPATADPDDAFETLAPAPAAAPA-PRAAAATEPVVAPRPPRASASGLPDMFDGDWPAL 584
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
349-601 |
1.23e-07 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 57.23 E-value: 1.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 349 DTPASSSPPqgtlDTPSSSSP-PQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSE 427
Cdd:NF033609 540 DKPVVPEQP----DEPGEIEPiPEDSDSDPGSDSGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASD 615
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 428 TPASSSPTQVTSETPASSSPTQVTSDtpaSNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTP 507
Cdd:NF033609 616 SDSASDSDSASDSDSASDSDSASDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 692
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 508 ASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASS-SPTNMTSDTPA 586
Cdd:NF033609 693 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSdSDSDSDSDSDS 772
|
250
....*....|....*.
gi 1039789998 587 -SSSPTNMTSDTPASS 601
Cdd:NF033609 773 dSDSDSDSDSDSDSDS 788
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
320-677 |
1.39e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 56.92 E-value: 1.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 320 GTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGT 399
Cdd:PRK07764 401 AAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAP 480
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 400 SETPGFSSPPQVTTATLVSSSPPQ--VTSETPASSSPT--------------------QVTS----------ETPAS--- 444
Cdd:PRK07764 481 APAPPAAPAPAAAPAAPAAPAAPAgaDDAATLRERWPEilaavpkrsrktwaillpeaTVLGvrgdtlvlgfSTGGLarr 560
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 445 -SSP-------------------TQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTS 504
Cdd:PRK07764 561 fASPgnaevlvtalaeelggdwqVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEAS 640
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 505 DTPASSS-PPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPtnmTSDTPASSSPTNMTSD 583
Cdd:PRK07764 641 AAPAPGVaAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQP---APAPAATPPAGQADDP 717
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 584 TPASSSPTNMTSDTPASSSPPWPVITEVTRPESTIPAGRSLANITSKAQEDSPlgviSTHPQMSFQSStSQQALDETAGE 663
Cdd:PRK07764 718 AAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAP----AAAPPPSPPSE-EEEMAEDDAPS 792
|
410
....*....|....
gi 1039789998 664 RVPtiPDFQAHSEF 677
Cdd:PRK07764 793 MDD--EDRRDAEEV 804
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
240-589 |
1.44e-07 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 56.84 E-value: 1.44e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 240 PQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQ 319
Cdd:NF033609 558 PEDSDSDPGSDSGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSA 637
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 320 GTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGT 399
Cdd:NF033609 638 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 717
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 400 SETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPA-SNSPPQGTSDTPGFSSPTQVTT 478
Cdd:NF033609 718 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSdSDSDSDSDSDSDSDSDSDSDSD 797
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 479 ATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSET 558
Cdd:NF033609 798 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNNVVPPNS 877
|
330 340 350
....*....|....*....|....*....|..
gi 1039789998 559 PASSSPTNMTSDTPASSSPTNMT-SDTPASSS 589
Cdd:NF033609 878 PKNGTNASNKNEAKDSKEPLPDTgSEDEANTS 909
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
352-606 |
1.61e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 57.26 E-value: 1.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 352 ASSSPPQGTLDTPSSssPPQGTSDTPASSSPPQGTSETPAsnsPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPAS 431
Cdd:PHA03247 243 VISHPLRGDIAAPAP--PPVVGEGADRAPETARGATGPPP---PPEAAAPNGAAAPPDGVWGAALAGAPLALPAPPDPPP 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 432 SSPTQVTSETPASSSPTQVTSDTPASNSP-PQGTSDT--PGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSD--- 505
Cdd:PHA03247 318 PAPAGDAEEEDDEDGAMEVVSPLPRPRQHyPLGFPKRrrPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARHAATPfar 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 506 TPASSSPPQVTSETPASSSPPqvtsdtsasiSPPQVISDTPASSSPPQVTSETPASSSPTNmtsdTPASSSPTNMTSDT- 584
Cdd:PHA03247 398 GPGGDDQTRPAAPVPASVPTP----------APTPVPASAPPPPATPLPSAEPGSDDGPAP----PPERQPPAPATEPAp 463
|
250 260
....*....|....*....|..
gi 1039789998 585 PASSSPTNMTSDTPASSSPPWP 606
Cdd:PHA03247 464 DDPDDATRKALDALRERRPPEP 485
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
439-631 |
1.68e-07 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 56.84 E-value: 1.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 439 SETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQvtSDTPASSSPPQVTSE 518
Cdd:NF033609 33 SSKEADASENSVTQSDSASNESKSNDSSSVSAAPKTDDTNVSDTKTSSNTNNGETSVAQNPAQ--QETTQSASTNATTEE 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 519 TPASSsppQVTSDTSASISPPQVI--SDTPASSSPPQVTSETpaSSSPTNMTSDTpasSSPTN--------MTSDTPASS 588
Cdd:NF033609 111 TPVTG---EATTTATNQANTPATTqsSNTNAEELVNQTSNET--TSNDTNTVSSV---NSPQNstnaenvsTTQDTSTEA 182
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1039789998 589 SPTNMTSDTPASSSPPWPVITEVTRPESTIPAGRSLANITSKA 631
Cdd:NF033609 183 TPSNNESAPQSTDASNKDVVNQAVNTSAPRMRAFSLAAVAADA 225
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
270-604 |
1.79e-07 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 56.84 E-value: 1.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 270 SDT-PASSSPPQVTSATSASSSPPQGTSDTPASSSppqvtsatsasssppqgtSDTPASSSPPQVTSATSASSSPPQGTS 348
Cdd:NF033609 561 SDSdPGSDSGSDSSNSDSGSDSGSDSTSDSGSDSA------------------SDSDSASDSDSASDSDSASDSDSASDS 622
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 349 DTPASSSPPQGTldtpSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSET 428
Cdd:NF033609 623 DSASDSDSASDS----DSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 429 PASSSPTQVTSETPASSSPTQVTSDTpASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDtpaSSSPPQVTSDTPA 508
Cdd:NF033609 699 DSDSDSDSDSDSDSDSDSDSDSDSDS-DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDS 774
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 509 SSSPPQVTSETPASSSPPQVTSDT-SASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPAS 587
Cdd:NF033609 775 DSDSDSDSDSDSDSDSDSDSDSDSdSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 854
|
330 340
....*....|....*....|.
gi 1039789998 588 SSPTNMTSDTPASSS----PP 604
Cdd:NF033609 855 DSESDSNSDSESGSNnnvvPP 875
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
409-615 |
1.91e-07 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 56.59 E-value: 1.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 409 PQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDT----PASNSPPQGTSDTPGFSSPTQVTTATLVSs 484
Cdd:PRK10811 848 VRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEvveePVVVAEPQPEEVVVVETTHPEVIAAPVTE- 926
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 485 sPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPP-QVISDTPASSSPPQVTSETPASSS 563
Cdd:PRK10811 927 -QPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAaPVVAEVAAEVETVTAVEPEVAPAQ 1005
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1039789998 564 PTNMTSDTPASSSPtnMTSdTPAsssptnmtsdtPASSSPPwPVITEVTRPE 615
Cdd:PRK10811 1006 VPEATVEHNHATAP--MTR-APA-----------PEYVPEA-PRHSDWQRPT 1042
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
377-670 |
1.94e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 56.53 E-value: 1.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 377 PASSSPPQGTS---ETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPtQVTSETPASSSPTQVTSD 453
Cdd:PRK07764 365 PSASDDERGLLarlERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAP-AAAPQPAPAPAPAPAPPS 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 454 TPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQ------------------- 514
Cdd:PRK07764 444 PAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAgaddaatlrerwpeilaav 523
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 515 ---VTSETPASSSPPQVTS----------DTSAS---ISPPQ---------------------VISDTPASSSPPQVTSE 557
Cdd:PRK07764 524 pkrSRKTWAILLPEATVLGvrgdtlvlgfSTGGLarrFASPGnaevlvtalaeelggdwqveaVVGPAPGAAGGEGPPAP 603
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 558 TPASSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSPPWPVITEVTRPESTIPAGRSLANITSKAQEDSPL 637
Cdd:PRK07764 604 ASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPP 683
|
330 340 350
....*....|....*....|....*....|...
gi 1039789998 638 GVISTHPQMSFQSSTSQQALDETAGERVPTIPD 670
Cdd:PRK07764 684 APAPAAPAAPAGAAPAQPAPAPAATPPAGQADD 716
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
352-578 |
2.00e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 56.26 E-value: 2.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 352 ASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETpgfSSPPQVTTATLVSSSPPQVTSETPAS 431
Cdd:PRK08691 363 AASCDANAVIENTELQSPSAQTAEKETAAKKPQPRPEAETAQTPVQTASAA---AMPSEGKTAGPVSNQENNDVPPWEDA 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 432 SSPTQvTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDtpasSSPPQVTSDTPASSS 511
Cdd:PRK08691 440 PDEAQ-TAAGTAQTSAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPN----DEAVETETFAHEAPA 514
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1039789998 512 PPQVTSETPASSSPPQvtsdTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPT 578
Cdd:PRK08691 515 EPFYGYGFPDNDCPPE----DGAEIPPPDWEHAAPADTAGGGADEEAEAGGIGGNNTPSAPPPEFST 577
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
363-532 |
2.69e-07 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 53.75 E-value: 2.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 363 TPSSSSPPQGTSDTPASSSppqgTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETP 442
Cdd:PHA03255 25 TSSGSSTASAGNVTGTTAV----TTPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTVTSTGTTVTPVPTTSNASTI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 443 ASSspTQVTSDTPASNSppQGTSDTPGFSSptQVTTATlvSSSPPQVTSDTPASSSPPQVTSDTpaSSSPPQVTSETPAS 522
Cdd:PHA03255 101 NVT--TKVTAQNITATE--AGTGTSTGVTS--NVTTRS--SSTTSATTRITNATTLAPTLSSKG--TSNATKTTAELPTV 170
|
170
....*....|
gi 1039789998 523 SSPPQVTSDT 532
Cdd:PHA03255 171 PDERQPSLSY 180
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
473-606 |
3.06e-07 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 55.05 E-value: 3.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 473 PTQVTTAtlvsssppQVTSDTPASSSPPQVTSDTPASSSPPQ----VTSETPASSSPPQVTSDTSASISPPQVISDTPAS 548
Cdd:pfam05539 169 KTAVTTS--------KTTSWPTEVSHPTYPSQVTPQSQPATQghqtATANQRLSSTEPVGTQGTTTSSNPEPQTEPPPSQ 240
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1039789998 549 SSPPQVTSETPASSSPtnmTSDTPASSSPTNMTSDTPASSSPTNmtsdTPASSSPPWP 606
Cdd:pfam05539 241 RGPSGSPQHPPSTTSQ---DQSTTGDGQEHTQRRKTPPATSNRR----SPHSTATPPP 291
|
|
| Caprin-1_C |
pfam12287 |
Cytoplasmic activation/proliferation-associated protein-1 C term; This family of proteins is ... |
416-651 |
3.14e-07 |
|
Cytoplasmic activation/proliferation-associated protein-1 C term; This family of proteins is found in eukaryotes. Proteins in this family are typically between 343 and 708 amino acids in length. This family is the C terminal region of caprin-1. Caprin-1 is a protein involved in regulating cellular proliferation. In mutated phenotypes, the G1 phase of the cell cycle is greatly lengthened, impairing normal proliferation. The C terminal region of caprin-1 contains RGG motifs which are characteriztic of RNA binding domains. It is possible that caprin-1 functions through an RNA binding mechanism.
Pssm-ID: 463522 [Multi-domain] Cd Length: 320 Bit Score: 54.80 E-value: 3.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 416 LVSSSPPQVTSETPASSSPtqvtsetPASssptqvtsdtPASNSPPQgtSDTPGFSSPTQVttatlvssspPQVTSDTPA 495
Cdd:pfam12287 30 IVSAQPPSQSPDLSQMVCP-------PAS----------PEQRLSQQ--SDVLQQPEQTQV----------SPVSPSSNA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 496 SSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPpqvisdtpasSSPPQVTSETPASSSPTNMTSdTPASS 575
Cdd:pfam12287 81 CASSGSEYQFHTSEPPQPEAIDPIQSSMSLPSELAPPSPPLSP----------ASQPQVFQSKPASSSGINVNA-APFQS 149
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1039789998 576 SPT--NMTSDTP-ASSSPTNMTSDTPASSSPPWPVITEVTRPESTIPAGRSLANITSKAQEDSPLGVISTHpqMSFQSS 651
Cdd:pfam12287 150 MQTvfNVNAPVPpRNEQELKESSQYSSGYNQSFSSQSTQTVPQCQLPSEQLEQTVVGAYHPDGTIQVSNGH--LAFYPA 226
|
|
| motB |
PRK12799 |
flagellar motor protein MotB; Reviewed |
347-465 |
4.44e-07 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 54.72 E-value: 4.44e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 347 TSDTPASSSPPQGTldTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVS--SSPPQV 424
Cdd:PRK12799 296 HGTVPVAAVTPSSA--VTQSSAITPSSAAIPSPAVIPSSVTTQSATTTQASAVALSSAGVLPSDVTLPGTVAlpAAEPVN 373
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1039789998 425 TSETPASSSPTQVTSE---TPASSSPTQVTSDTPASNSPPQGTS 465
Cdd:PRK12799 374 MQPQPMSTTETQQSSTgniTSTANGPTTSLPAAPASNIPVSPTS 417
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
417-602 |
4.52e-07 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 54.81 E-value: 4.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 417 VSSSPPQVTSETPASSSPTQVTsetPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATL--------------- 481
Cdd:PRK13914 143 VTSTPVAPTQEVKKETTTQQAA---PAAETKTEVKQTTQATTPAPKVAETKETPVVDQNATTHAVksgdtiwalsvkygv 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 482 ----------VSSSP----PQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPA 547
Cdd:PRK13914 220 svqdimswnnLSSSSiyvgQKLAIKQTANTATPKAEVKTEAPAAEKQAAPVVKENTNTNTATTEKKETTTQQQTAPKAPT 299
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1039789998 548 SSS----PPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPASSS 602
Cdd:PRK13914 300 EAAkpapAPSTNTNANKTNTNTNTNTNNTNTSTPSKNTNTNTNSNTNTNSNTNANQGSS 358
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
347-511 |
4.91e-07 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 52.98 E-value: 4.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 347 TSDTPASSSppqgtldTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTseTPGFSSPPQVTTATLVSSSPPQVTS 426
Cdd:PHA03255 25 TSSGSSTAS-------AGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAPITT--TAILSTNTTTVTSTGTTVTPVPTTS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 427 ETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTpgfSSPTQVTTATLVSSSPPQVTSD--TPASSSPPQVTS 504
Cdd:PHA03255 96 NASTINVTTKVTAQNITATEAGTGTSTGVTSNVTTRSSSTT---SATTRITNATTLAPTLSSKGTSnaTKTTAELPTVPD 172
|
....*..
gi 1039789998 505 DTPASSS 511
Cdd:PHA03255 173 ERQPSLS 179
|
|
| PLN02217 |
PLN02217 |
probable pectinesterase/pectinesterase inhibitor |
423-582 |
5.13e-07 |
|
probable pectinesterase/pectinesterase inhibitor
Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 55.10 E-value: 5.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 423 QVTSETPASSSPTQVTSETPASSSPTQVTSDTPASN------SPPQGTSDTPG-FSSPTQVTTATLVSSSPPQVTSDTPA 495
Cdd:PLN02217 508 EVQNTGPGAAITKRVTWPGIKKLSDEEILKFTPAQYiqgdawIPGKGVPYIPGlFAGNPGSTNSTPTGSAASSNTTFSSD 587
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 496 SSSppqvTSDTPASSSPPQVTSETPASSSpPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTNM-TSDTPAS 574
Cdd:PLN02217 588 SPS----TVVAPSTSPPAGHLGSPPATPS-KIVSPSTSPPASHLGSPSTTPSSPESSIKVASTETASPESSIkVASTESS 662
|
....*...
gi 1039789998 575 SSPTNMTS 582
Cdd:PLN02217 663 VSMVSMST 670
|
|
| motB |
PRK12799 |
flagellar motor protein MotB; Reviewed |
477-607 |
6.79e-07 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 53.95 E-value: 6.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 477 TTATLVSSSPPqvTSDTPASSSPPQVTSDTPASSSPPqvtseTPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTS 556
Cdd:PRK12799 296 HGTVPVAAVTP--SSAVTQSSAITPSSAAIPSPAVIP-----SSVTTQSATTTQASAVALSSAGVLPSDVTLPGTVALPA 368
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1039789998 557 ETPASSSPTNMTSDTPASSSPTNMtsdTPASSSPTNMTSDTPASSSPPWPV 607
Cdd:PRK12799 369 AEPVNMQPQPMSTTETQQSSTGNI---TSTANGPTTSLPAAPASNIPVSPT 416
|
|
| PAP1 |
pfam08601 |
Transcription factor PAP1; The transcription factor Pap1 regulates antioxidant-gene ... |
346-536 |
7.15e-07 |
|
Transcription factor PAP1; The transcription factor Pap1 regulates antioxidant-gene transcription in response to H2O2. This region is cysteine rich. Alkylation of cysteine residues following treatment with a cysteine alkylating agent can mask the accessibility of the nuclear exporter Crm1, triggering nuclear accumulation and Pap1 dependent transcriptional expression.
Pssm-ID: 369990 Cd Length: 363 Bit Score: 53.71 E-value: 7.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 346 GTSDTPASSSPPQGTLDTPSSSSPPqgtSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVT 425
Cdd:pfam08601 31 QLSKAKQNTAKPGVRSDSRSPSPNA---STSTPDSQPPPSASSSTTPNQGSNGLNAFTGEDNNNYSNSAANPGATRGSTA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 426 SETPASSSPTQVTSETPASS-SPTQvTSDTPASNSPPQGTSDTPGFSSPTQ--VTTATLVSSSPPQVTSDTPASSSPPQV 502
Cdd:pfam08601 108 SSARSQSSPYSFGSGTSTSSdSPSS-SSSSHQGQLSSCGTSPEPSTQSPGGqkSVETMIGEEQCAHGTIDGEKSFCAKLG 186
|
170 180 190
....*....|....*....|....*....|....
gi 1039789998 503 TSDTPASSSPPQVTSETPASSSPPQVTSDTSASI 536
Cdd:pfam08601 187 MACGNINNPIPAAMSKSNSLSNTPGHASNDSNGL 220
|
|
| GPS |
pfam01825 |
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ... |
1041-1079 |
8.34e-07 |
|
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.
Pssm-ID: 460350 Cd Length: 44 Bit Score: 47.30 E-value: 8.34e-07
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1039789998 1041 QCYFWDRYNRT---WKSDGCQVGPKSTiLKTQCLCDHLTFFS 1079
Cdd:pfam01825 2 QCVFWDFTNSTtgrWSTEGCTTVSLND-THTVCSCNHLTSFA 42
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
373-559 |
8.53e-07 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 52.21 E-value: 8.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 373 TSDTPASSSPpQGTSETPASNSPpqgtseTPGFSSPPQVTTATLVSSSPPqVTSETPASSSPTQVTSeTPASSSPTQVTS 452
Cdd:PHA03255 25 TSSGSSTASA-GNVTGTTAVTTP------SPSASGPSTNQSTTLTTTSAP-ITTTAILSTNTTTVTS-TGTTVTPVPTTS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 453 DTpasnsppqgtsdtpgfSSPTQVTTATLVSSSppqvTSDTPASSSPPQVTSDTPASSSPPQVTSE-TPASSSPPQVTSD 531
Cdd:PHA03255 96 NA----------------STINVTTKVTAQNIT----ATEAGTGTSTGVTSNVTTRSSSTTSATTRiTNATTLAPTLSSK 155
|
170 180
....*....|....*....|....*...
gi 1039789998 532 TSASISPPQVISDTPASSSPPQVTSETP 559
Cdd:PHA03255 156 GTSNATKTTAELPTVPDERQPSLSYGLP 183
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
490-670 |
8.69e-07 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 52.21 E-value: 8.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 490 TSDTPASSSPPQVTSDTPasssppqVTSETPASSSPPQVTSDTSASISPPqvISDTPASSSPPQVTSETPASSSPTNMTS 569
Cdd:PHA03255 25 TSSGSSTASAGNVTGTTA-------VTTPSPSASGPSTNQSTTLTTTSAP--ITTTAILSTNTTTVTSTGTTVTPVPTTS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 570 DTPASSSPTNMTSDTPASSSptnmtsdTPASSSPpwPVITEV-TRPESTIPAGRSLANITSKAQEdsplgvisthpqmsf 648
Cdd:PHA03255 96 NASTINVTTKVTAQNITATE-------AGTGTST--GVTSNVtTRSSSTTSATTRITNATTLAPT--------------- 151
|
170 180
....*....|....*....|..
gi 1039789998 649 QSSTSQQALDETAGErVPTIPD 670
Cdd:PHA03255 152 LSSKGTSNATKTTAE-LPTVPD 172
|
|
| SP2_N |
cd22540 |
N-terminal domain of transcription factor Specificity Protein (SP) 2; Specificity Proteins ... |
351-619 |
8.79e-07 |
|
N-terminal domain of transcription factor Specificity Protein (SP) 2; Specificity Proteins (SPs) are transcription factors that are involved in many cellular processes, including cell differentiation, cell growth, apoptosis, immune responses, response to DNA damage, and chromatin remodeling. SP2 contains the least conserved DNA-binding domain within the SP subfamily of proteins, and its DNA sequence specificity differs from the other SP proteins. It localizes primarily within subnuclear foci associated with the nuclear matrix, and can activate, or in some cases, repress expression from different promoters. The transcription factor SP2 serves as a paradigm for indirect genomic binding. It does not require its DNA-binding domain for genomic DNA binding and occupies target promoters independently of whether they contain a cognate DNA-binding motif. SP2 belongs to a family of proteins, called the SP/Kruppel or Krueppel-like Factor (KLF) family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. SP factors preferentially bind GC boxes, while KLFs bind CACCC boxes. Another characteristic hallmark of SP factors is the presence of the Buttonhead (BTD) box CXCPXC, just N-terminal to the zinc fingers. The function of the BTD box is unknown, but it is thought to play an important physiological role. Another feature of most SP factors is the presence of a conserved amino acid stretch, the so-called SP box, located close to the N-terminus. SP factors may be separated into three groups based on their domain architecture and the similarity of their N-terminal transactivation domains: SP1-4, SP5, and SP6-9. The transactivation domains between the three groups are not homologous to one another. SP1-4 have similar N-terminal transactivation domains characterized by glutamine-rich regions, which, in most cases, have adjacent serine/threonine-rich regions. This model represents the N-terminal domain of SP2.
Pssm-ID: 411776 [Multi-domain] Cd Length: 511 Bit Score: 54.16 E-value: 8.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 351 PASSSPPQGTLDTPSSSS------PPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSS---- 420
Cdd:cd22540 66 PLPLGPGKNSIGFLSAKGniiqlqGSQLSSSAPGGQQVFAIQNPTMIIKGSQTRSSTNQQYQISPQIQAAGQINNSgqiq 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 421 -----------PPQVTSETPASSSPTQVTsetPASSSPTQVTSDTPASN-------SPPQGTSDTP-----GFSSPTQVT 477
Cdd:cd22540 146 iipgtnqaiitPVQVLQQPQQAHKPVPIK---PAPLQTSNTNSASLQVPgnviklqSGGNVALTLPvnnlvGTQDGATQL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 478 TATLVSSSPPQVTSDTPASSSPPQVTS--------------------------DTPASSSPPQV--------TSETPASS 523
Cdd:cd22540 223 QLAAAPSKPSKKIRKKSAQAAQPAVTVaeqvetvliettadniiqagnnllivQSPGTGQPAVLqqvqvlqpKQEQQVVQ 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 524 SPP------QVTSDTSASI--SPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTS 595
Cdd:cd22540 303 IPQqalrvvQAASATLPTVpqKPLQNIQIQNSEPTPTQVYIKTPSGEVQTVLLQEAPAATATPSSSTSTVQQQVTANNGT 382
|
330 340
....*....|....*....|....
gi 1039789998 596 DTPASSSPpwpvitevTRPESTIP 619
Cdd:cd22540 383 GTSKPNYN--------VRKERTLP 398
|
|
| CLECT |
cd00037 |
C-type lectin (CTL)/C-type lectin-like (CTLD) domain; CLECT: C-type lectin (CTL)/C-type ... |
37-142 |
9.43e-07 |
|
C-type lectin (CTL)/C-type lectin-like (CTLD) domain; CLECT: C-type lectin (CTL)/C-type lectin-like (CTLD) domain; protein domains homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. This group is chiefly comprised of eukaryotic CTLDs, but contains some, as yet functionally uncharacterized, bacterial CTLDs. Many CTLDs are calcium-dependent carbohydrate binding modules; other CTLDs bind protein ligands, lipids, and inorganic surfaces, including CaCO3 and ice. Animal C-type lectins are involved in such functions as extracellular matrix organization, endocytosis, complement activation, pathogen recognition, and cell-cell interactions. For example: mannose-binding lectin and lung surfactant proteins A and D bind carbohydrates on surfaces (e.g. pathogens, allergens, necrotic, and apoptotic cells) and mediate functions associated with killing and phagocytosis; P (platlet)-, E (endothelial)-, and L (leukocyte)- selectins (sels) mediate the initial attachment, tethering, and rolling of lymphocytes on inflamed vascular walls enabling subsequent lymphocyte adhesion and transmigration. CTLDs may bind a variety of carbohydrate ligands including mannose, N-acetylglucosamine, galactose, N-acetylgalactosamine, and fucose. Several CTLDs bind to protein ligands, and only some of these binding interactions are Ca2+-dependent; including the CTLDs of Coagulation Factors IX/X (IX/X) and Von Willebrand Factor (VWF) binding proteins, and natural killer cell receptors. C-type lectins, such as lithostathine, and some type II antifreeze glycoproteins function in a Ca2+-independent manner to bind inorganic surfaces. Many proteins in this group contain a single CTLD; these CTLDs associate with each other through several different surfaces to form dimers, trimers, or tetramers, from which ligand-binding sites project in different orientations. Various vertebrate type 1 transmembrane proteins including macrophage mannose receptor, endo180, phospholipase A2 receptor, and dendritic and epithelial cell receptor (DEC205) have extracellular domains containing 8 or more CTLDs; these CTLDs remain in the parent model. In some members (IX/X and VWF binding proteins), a loop extends to the adjoining domain to form a loop-swapped dimer. A similar conformation is seen in the macrophage mannose receptor CRD4's putative non-sugar bound form of the domain in the acid environment of the endosome. Lineage specific expansions of CTLDs have occurred in several animal lineages including Drosophila melanogaster and Caenorhabditis elegans; these CTLDs also remain in the parent model.
Pssm-ID: 153057 [Multi-domain] Cd Length: 116 Bit Score: 49.54 E-value: 9.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 37 SCYQLNRLFCDFQEADNYCHAQRGRLAHTWNPKLRGFLKSFL---NEETVW-------------WVRGNLTLPGSHPGIN 100
Cdd:cd00037 1 SCYKFSTEKLTWEEAQEYCRSLGGHLASIHSEEENDFLASLLkksSSSDVWiglndlssegtwkWSDGSPLVDYTNWAPG 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1039789998 101 QTGGDDvlrnqkPGECpsvVTHSNAVFSRWN--LCIEKHHFICQ 142
Cdd:cd00037 81 EPNPGG------SEDC---VVLSSSSDGKWNdvSCSSKLPFICE 115
|
|
| Caprin-1_C |
pfam12287 |
Cytoplasmic activation/proliferation-associated protein-1 C term; This family of proteins is ... |
362-498 |
1.47e-06 |
|
Cytoplasmic activation/proliferation-associated protein-1 C term; This family of proteins is found in eukaryotes. Proteins in this family are typically between 343 and 708 amino acids in length. This family is the C terminal region of caprin-1. Caprin-1 is a protein involved in regulating cellular proliferation. In mutated phenotypes, the G1 phase of the cell cycle is greatly lengthened, impairing normal proliferation. The C terminal region of caprin-1 contains RGG motifs which are characteriztic of RNA binding domains. It is possible that caprin-1 functions through an RNA binding mechanism.
Pssm-ID: 463522 [Multi-domain] Cd Length: 320 Bit Score: 52.49 E-value: 1.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 362 DTPS-----SSSPPQGTSDTPASSSPPQgtsetpasnSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQ 436
Cdd:pfam12287 23 DKPSdsaivSAQPPSQSPDLSQMVCPPA---------SPEQRLSQQSDVLQQPEQTQVSPVSPSSNACASSGSEYQFHTS 93
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039789998 437 VTSETPASSSPtqvtsdtPASNSPPqgtsdtpgfSSPTQvTTATLVSSSPPQVTSDTPASSS 498
Cdd:pfam12287 94 EPPQPEAIDPI-------QSSMSLP---------SELAP-PSPPLSPASQPQVFQSKPASSS 138
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
408-697 |
1.49e-06 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 53.52 E-value: 1.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 408 PPQVTTATLVSSSPPQVTSE----TPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVS 483
Cdd:PHA03377 399 PVQQRPVMFVSRVPWRKPRTlpwpTPKTHPVKRTLVKTSGRSDEAEQAQSTPERPGPSDQPSVPVEPAHLTPVEHTTVIL 478
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 484 SSPPQVTSDTPASSSPPQV---------------------TSDTPASSSPPQVTSETPASSSppQVTSDTSASISPPQVI 542
Cdd:PHA03377 479 HQPPQSPPTVAIKPAPPPSrrrrgacvvydddiievidveTTEEEESVTQPAKPHRKVQDGF--QRSGRRQKRATPPKVS 556
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 543 -SDT-PASSSPPQV---TSETPASSSPTNMTSDT-PASSSPTNMT--SDTPASSSPTNMtsdTPASSSPPW---PVITEV 611
Cdd:PHA03377 557 pSDRgPPKASPPVMappSTGPRVMATPSTGPRDMaPPSTGPRQQAkcKDGPPASGPHEK---QPPSSAPRDmapSVVRMF 633
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 612 TR----PESTIPAGRSLANITSKAQEDSPLGVISTHPQMSFQSSTSQQAldetageRVPTIPDFQAHSEFQKACAILQRL 687
Cdd:PHA03377 634 LRerllEQSTGPKPKSFWEMRAGRDGSGIQQEPSSRRQPATQSTPPRPS-------WLPSVFVLPSVDAGRAQPSEESHL 706
|
330
....*....|
gi 1039789998 688 RDFLPTSPTS 697
Cdd:PHA03377 707 SSMSPTQPIS 716
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
410-632 |
1.65e-06 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 53.53 E-value: 1.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 410 QVTTATLVSSSPPQVTSetpASSSPTQVTSETpasssptQVTSDTPASNSPPQGTS-DTPGfssPTQVTTATLVSSSPPQ 488
Cdd:PHA03378 518 QRVMATLLPPSPPQPRA---GRRAPCVYTEDL-------DIESDEPASTEPVHDQLlPAPG---LGPLQIQPLTSPTTSQ 584
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 489 VTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPP---QVIS-DTPASSSPPQVTSETPASSSP 564
Cdd:PHA03378 585 LASSAPSYAQTPWPVPHPSQTPEPPTTQSHIPETSAPRQWPMPLRPIPMRPlrmQPITfNVLVFPTPHQPPQVEITPYKP 664
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1039789998 565 T-NMTSDTPASSSPTNMTSDTPASSSPTNMTSD--TPASSSPPWPVITEVTRPESTIPAGRSLANITSKAQ 632
Cdd:PHA03378 665 TwTQIGHIPYQPSPTGANTMLPIQWAPGTMQPPprAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRAR 735
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
190-576 |
1.93e-06 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 53.37 E-value: 1.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 190 QPAPPELFEtlcfPIDPASSAPPKathrmtitSLTGRPQVTSDTlASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGT 269
Cdd:NF033609 547 QPDEPGEIE----PIPEDSDSDPG--------SDSGSDSSNSDS-GSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSA 613
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 270 SDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSD 349
Cdd:NF033609 614 SDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 693
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 350 TPASSSPpqgtlDTPS-SSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSET 428
Cdd:NF033609 694 SDSDSDS-----DSDSdSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 768
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 429 PASSSPTQVTSETPASSSPTQVTSDTPA-SNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSppqvtSDTP 507
Cdd:NF033609 769 DSDSDSDSDSDSDSDSDSDSDSDSDSDSdSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-----SDSD 843
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 508 ASSSPPQVTSETPASSSPPQVTSDTSASISPPqvisDTPASSSPPQVTSETPASSSPTNMT-SDTPASSS 576
Cdd:NF033609 844 SDSDSDSDSDSDSESDSNSDSESGSNNNVVPP----NSPKNGTNASNKNEAKDSKEPLPDTgSEDEANTS 909
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
353-499 |
1.98e-06 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 52.48 E-value: 1.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 353 SSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSS---PPQVTTATLVSSSPPQVT--SE 427
Cdd:pfam13254 210 RSPAPGGHSKSPSVSGISADSSPTKEEPSEEADTLSTDKEQSPAPTSASEPPPKTkelPKDSEEPAAPSKSAEASTekKE 289
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1039789998 428 TPASSSP--TQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSsppQVTSDTPASSSP 499
Cdd:pfam13254 290 PDTESSPetSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSPKPKPQSPPKDFRANLRSR---EVPKDKSKKDEP 360
|
|
| ARG80 |
COG5068 |
Regulator of arginine metabolism and related MADS box-containing transcription factors ... |
347-604 |
2.35e-06 |
|
Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription];
Pssm-ID: 227400 [Multi-domain] Cd Length: 412 Bit Score: 52.33 E-value: 2.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 347 TSDTPASSSPPQGTLDTPSSSSpPQGTSDTPASSSPPQGTSETPASNSPPQGtsetpgfSSPPQVTTATLVSSSPPQVts 426
Cdd:COG5068 163 PSDSSEEPSSSASFSVDPNDNN-PMGSFQHNGSPQTNFIPLQNPQTQQYQQH-------SSRKDHPTVPHSNTNNGRP-- 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 427 etPASSSPTQVTSETPASSSPTQVTSDtpaSNSPPQG-TSDTPGFSSPTQVTTATLVsSSPPQVTSDTPASSSPPQVTSD 505
Cdd:COG5068 233 --PAKFMIPELHSSHSTLDLPSDFISD---SGFPNQSsTSIFPLDSAIIQITPPHLP-NNPPQENRHELYSNDSSMVSET 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 506 TPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTP 585
Cdd:COG5068 307 PPPKNLPNGSPNQSPLNNLSRGNPASPNSIIRENNQVEDESFNGRQGSAIWNALISTTQPNSGLHTEASTAPSSTIPADP 386
|
250
....*....|....*....
gi 1039789998 586 ASSSPTNMTSDTPASSSPP 604
Cdd:COG5068 387 LKNAAQTNSGTRNNNFSDN 405
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
496-577 |
2.71e-06 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 51.95 E-value: 2.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 496 SSSPPQVTSDTPASSSPPQVTSETPASSSP--PQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPA 573
Cdd:PRK10856 168 TTTDPATTPAPAAPVDTTPTNSQTPAVATApaPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAGVSTP 247
|
....
gi 1039789998 574 SSSP 577
Cdd:PRK10856 248 AADP 251
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
211-586 |
2.73e-06 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 52.37 E-value: 2.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 211 PPKATHRMTITSLTgRPQVTSDTLASSSPPQGTSDT----PASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATS 286
Cdd:COG5180 187 EPRDALKDSPEKLD-RPKVEVKDEAQEEPPDLTGGAdhprPEAASSPKVDPPSTSEARSRPATVDAQPEMRPPADAKERR 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 287 ASSSPpqgtsDTPASSSPPQvtsatSASSSPPQGTSDTPASSSPPQvtsatsasssppqgTSDTPASSSPPQGTLDTPSS 366
Cdd:COG5180 266 RAAIG-----DTPAAEPPGL-----PVLEAGSEPQSDAPEAETARP--------------IDVKGVASAPPATRPVRPPG 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 367 SSPPQGTSDTPASSSPPQGTSETpASNSPPQGTSETPGFSSPPqvtTATLVSSSPpqvtsetPASSSPTQVTSETPASSS 446
Cdd:COG5180 322 GARDPGTPRPGQPTERPAGVPEA-ASDAGQPPSAYPPAEEAVP---GKPLEQGAP-------RPGSSGGDGAPFQPPNGA 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 447 PtQVTSDTPASNSPPQGTSDTPGFSSPTQVTTAtlVSSSPPQvtsdTPASSSPPQVTSDTPASS----SPPQVTSETPAS 522
Cdd:COG5180 391 P-QPGLGRRGAPGPPMGAGDLVQAALDGGGRET--ASLGGAA----GGAGQGPKADFVPGDAESvsgpAGLADQAGAAAS 463
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1039789998 523 SSP-PQVTSDTSASISPPQVISDTPASSSPPqvTSETPASSSPtnmTSDTPASSSPTNMTSDTPA 586
Cdd:COG5180 464 TAMaDFVAPVTDATPVDVADVLGVRPDAILG--GNVAPASGLD---AETRIIEAEGAPATEDFVA 523
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
356-586 |
2.98e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 52.57 E-value: 2.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 356 PPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPT 435
Cdd:PRK12323 365 PGQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGP 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 436 QVTSETPASSSPTQVTSDTPASnSPPQGTSDTPGFSSPTQVTTATlvssSPPQVTSDTPASSSPPQVTSDTPASSSPPQV 515
Cdd:PRK12323 445 GGAPAPAPAPAAAPAAAARPAA-AGPRPVAAAAAAAPARAAPAAA----PAPADDDPPPWEELPPEFASPAPAQPDAAPA 519
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1039789998 516 TSETPASSSPPQVTSDTSASISPPQvisdtPASSSPPQVTSETPASSSPTnmTSDTPASSSPTNMTSDTPA 586
Cdd:PRK12323 520 GWVAESIPDPATADPDDAFETLAPA-----PAAAPAPRAAAATEPVVAPR--PPRASASGLPDMFDGDWPA 583
|
|
| PPE |
COG5651 |
PPE-repeat protein [Function unknown]; |
363-587 |
3.57e-06 |
|
PPE-repeat protein [Function unknown];
Pssm-ID: 444372 [Multi-domain] Cd Length: 385 Bit Score: 51.82 E-value: 3.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 363 TPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGtsetpGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETP 442
Cdd:COG5651 165 TPFTQPPPTITNPGGLLGAQNAGSGNTSSNPGFANL-----GLTGLNQVGIGGLNSGSGPIGLNSGPGNTGFAGTGAAAG 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 443 ASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPAS 522
Cdd:COG5651 240 AAAAAAAAAAAAGAGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAGGGAGAAAATGLGLGAGGAAGAA 319
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039789998 523 SSPPQVTSD-TSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPAS 587
Cdd:COG5651 320 GATGAGAALgAGAAAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGGGSAGAAAGAASGGGAAA 385
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
239-551 |
3.93e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 52.16 E-value: 3.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 239 PPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPqvtsatsassspp 318
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAP------------- 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 319 qgtsdtPASSSPPQvtsatsasssPPQGTSDTPASSSPPQGTLDTPSS-SSPPQGTSDTPASSSPPQGtseTPASNSPPQ 397
Cdd:PRK07003 427 ------PAAPAPPA----------TADRGDDAADGDAPVPAKANARASaDSRCDERDAQPPADSGSAS---APASDAPPD 487
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 398 GTSEtpgfSSPPqvttATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPqgtSDTPGFSSPTQV- 476
Cdd:PRK07003 488 AAFE----PAPR----AAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPA---ARAGGAAAALDVl 556
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1039789998 477 TTATLVSSSPPQVTSDTPASSSPPQVTSDTPAsssPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSP 551
Cdd:PRK07003 557 RNAGMRVSSDRGARAAAAAKPAAAPAAAPKPA---APRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPPP 628
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
319-547 |
4.08e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 52.19 E-value: 4.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 319 QGTSDTPASSSPPQVTSATSASSSPPQGTSdTPASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQG 398
Cdd:PRK12323 368 SGGGAGPATAAAAPVAQPAPAAAAPAAAAP-APAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGG 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 399 TSETPgfSSPPQVTTATlvsSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPtqvTT 478
Cdd:PRK12323 447 APAPA--PAPAAAPAAA---ARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDA---AP 518
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1039789998 479 ATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPqvtsDTSASISPPQVISDTPA 547
Cdd:PRK12323 519 AGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPP----RASASGLPDMFDGDWPA 583
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
485-636 |
4.82e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 52.02 E-value: 4.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 485 SPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSE---TPASSSPPQVTSDTSASISPPQvisDTPASSSPPQVTSETPAS 561
Cdd:PRK08691 379 SPSAQTAEKETAAKKPQPRPEAETAQTPVQTASAaamPSEGKTAGPVSNQENNDVPPWE---DAPDEAQTAAGTAQTSAK 455
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1039789998 562 SSPTNMTSDTPASSSPT-NMTSDTPASSSPTNMTSDTPASSSP-PWPVITEVTRPESTIPAgrslANITSKAQEDSP 636
Cdd:PRK08691 456 SIQTASEAETPPENQVSkNKAADNETDAPLSEVPSENPIQATPnDEAVETETFAHEAPAEP----FYGYGFPDNDCP 528
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
211-606 |
5.91e-06 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 51.60 E-value: 5.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 211 PP---KATHRMTITSLTGRPQVTSDTLASssPPQGTSDTPassSPPQVTSATSASSSPPQGTSDTPASS-SPPQVTSATS 286
Cdd:PHA03379 379 PPiflRRLHRLLLMRAGKLTERAREALEK--ASEPTYGTP---RPPVEKPRPEVPQSLETATSHGSAQVpEPPPVHDLEP 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 287 ASSSPPQGTSDTPASSSPPqvtsatsasssppqgtsdtpassSPPQVTSATSASSSPPQGTSDTPASSSPPQGTLDTPSS 366
Cdd:PHA03379 454 GPLHDQHSMAPCPVAQLPP-----------------------GPLQDLEPGDQLPGVVQDGRPACAPVPAPAGPIVRPWE 510
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 367 SSPPQGTSDTPASSSP----------PQGTSETPASNSPP----QGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASS 432
Cdd:PHA03379 511 ASLSQVPGVAFAPVMPqpmpvepvpvPTVALERPVCPAPPliamQGPGETSGIVRVRERWRPAPWTPNPPRSPSQMSVRD 590
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 433 SPTQVTSET-----PASSSPTQVTSDTPAS-----NSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTS---DTPASSSP 499
Cdd:PHA03379 591 RLARLRAEAqpyqaSVEVQPPQLTQVSPQQpmeypLEPEQQMFPGSPFSQVADVMRAGGVPAMQPQYFDlplQQPISQGA 670
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 500 PQVTSDTPASSSPPqVTSETPASSSPPqVTSDTSASISPPQVISDTPAssSPPQVtseTPASSSPTNMTSDTPASSSPTN 579
Cdd:PHA03379 671 PLAPLRASMGPVPP-VPATQPQYFDIP-LTEPINQGASAAHFLPQQPM--EGPLV---PERWMFQGATLSQSVRPGVAQS 743
|
410 420
....*....|....*....|....*..
gi 1039789998 580 MTSDTPASSSPTNMTSDTPASSSPPWP 606
Cdd:PHA03379 744 QYFDLPLTQPINHGAPAAHFLHQPPME 770
|
|
| PLN03223 |
PLN03223 |
Polycystin cation channel protein; Provisional |
2015-2170 |
6.65e-06 |
|
Polycystin cation channel protein; Provisional
Pssm-ID: 215637 [Multi-domain] Cd Length: 1634 Bit Score: 51.87 E-value: 6.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 2015 LRGFLLLFATVRVWDLLRHHAQLQVINKTLSKAWDEVLGFILIIVVLLSSYAMTFNLLFGWSISDYQSFFRSIVTVVGLL 2094
Cdd:PLN03223 1294 LSGINIILLLGRILKLMDFQPRLGVITRTLWLAGADLMHFFVIFGMVFVGYAFIGHVIFGNASVHFSDMTDSINSLFENL 1373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 2095 MG-----TSKHKEVIALYPILGSLLVLSSIILMGLVIINLFVSAILIAFGkERKACEKEAT-----LTDMLLQKLSSLLG 2164
Cdd:PLN03223 1374 LGdityfNEDLKNLTGLQFVVGMIYFYSYNIFVFMILFNFLLAIICDAFG-EVKANAAETVsvhteLFPMLRDKWRSMFK 1452
|
....*.
gi 1039789998 2165 IRLHQN 2170
Cdd:PLN03223 1453 GWFYKN 1458
|
|
| PLN02217 |
PLN02217 |
probable pectinesterase/pectinesterase inhibitor |
371-484 |
6.81e-06 |
|
probable pectinesterase/pectinesterase inhibitor
Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 51.24 E-value: 6.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 371 QGTSDTPASSSP--PQGTSETPAS-NSPPQGTSeTPGFSSPPQVTTATLV--SSSPPQVTSETPASSSPTQVTSETPASS 445
Cdd:PLN02217 545 QGDAWIPGKGVPyiPGLFAGNPGStNSTPTGSA-ASSNTTFSSDSPSTVVapSTSPPAGHLGSPPATPSKIVSPSTSPPA 623
|
90 100 110
....*....|....*....|....*....|....*....
gi 1039789998 446 SPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSS 484
Cdd:PLN02217 624 SHLGSPSTTPSSPESSIKVASTETASPESSIKVASTESS 662
|
|
| GPS |
smart00303 |
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ... |
1040-1079 |
9.12e-06 |
|
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.
Pssm-ID: 197639 Cd Length: 49 Bit Score: 44.69 E-value: 9.12e-06
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1039789998 1040 TQCYFWDRYNRTWKSDGCQVGPKS-TIlkTQCLCDHLTFFS 1079
Cdd:smart00303 3 PICVFWDESSGEWSTRGCELLETNgTH--TTCSCNHLTTFA 41
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
351-448 |
1.00e-05 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 50.34 E-value: 1.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 351 PASSSPPQGTLDTPSSSSPPQ-GTSD--TPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSE 427
Cdd:PHA03291 176 PLGEGSADGSCDPALPLSAPRlGPADvfVPATPRPTPRTTASPETTPTPSTTTSPPSTTIPAPSTTIAAPQAGTTPEAEG 255
|
90 100
....*....|....*....|.
gi 1039789998 428 TPASSSPTqVTSETPASSSPT 448
Cdd:PHA03291 256 TPAPPTPG-GGEAPPANATPA 275
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
352-588 |
1.15e-05 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 50.19 E-value: 1.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 352 ASSSPPQGTLDTPSSSSPPQGTsdtPASSSPPQGTSETPASNSPPQG--TSETPGFSSppQVTTATLVSSSPPQVTSeTP 429
Cdd:PRK13914 143 VTSTPVAPTQEVKKETTTQQAA---PAAETKTEVKQTTQATTPAPKVaeTKETPVVDQ--NATTHAVKSGDTIWALS-VK 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 430 ASSSPTQVTSETPASSSPTQVTSD----TPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSD 505
Cdd:PRK13914 217 YGVSVQDIMSWNNLSSSSIYVGQKlaikQTANTATPKAEVKTEAPAAEKQAAPVVKENTNTNTATTEKKETTTQQQTAPK 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 506 TPASSSPPqvtseTPAssspPQVTSDTSASISPPQVISDTPASSSPPQVTSETpaSSSPTNMTSDTPASSSPTNMTSDTP 585
Cdd:PRK13914 297 APTEAAKP-----APA----PSTNTNANKTNTNTNTNTNNTNTSTPSKNTNTN--TNSNTNTNSNTNANQGSSNNNSNSS 365
|
...
gi 1039789998 586 ASS 588
Cdd:PRK13914 366 ASA 368
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
321-469 |
1.21e-05 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 50.05 E-value: 1.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 321 TSDTPASSSPPQ----VTSATSASSSPPQGTSDTPASSSPPQGTLDTPSSSSPPqgTSDTPASSSPPQGTSETPASNSPP 396
Cdd:pfam05539 191 SQVTPQSQPATQghqtATANQRLSSTEPVGTQGTTTSSNPEPQTEPPPSQRGPS--GSPQHPPSTTSQDQSTTGDGQEHT 268
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1039789998 397 QGTSETPGFSSPPQV-TTATLVSSSPPQVTSE-TPASSSPTQVTSeTPASSSPTQVTSDTPASNSPPQGTSDTPG 469
Cdd:pfam05539 269 QRRKTPPATSNRRSPhSTATPPPTTKRQETGRpTPRPTATTQSGS-SPPHSSPPGVQANPTTQNLVDCKELDPPK 342
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
494-656 |
1.26e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 50.55 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 494 PASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQvisDTPASSSPPQVTSETPASSSPTNMTSDTPA 573
Cdd:PHA03307 22 PRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPP---TGPPPGPGTEAPANESRSTPTWSLSTLAPA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 574 SSSPTNmtSDTPASSSPTNMTSDTPASSSP---PWPVITEVTRPE-STIPAGRSLANITSKAQEDSPLGVISTHPQMSFQ 649
Cdd:PHA03307 99 SPAREG--SPTPPGPSSPDPPPPTPPPASPppsPAPDLSEMLRPVgSPGPPPAASPPAAGASPAAVASDAASSRQAALPL 176
|
....*..
gi 1039789998 650 SSTSQQA 656
Cdd:PHA03307 177 SSPEETA 183
|
|
| PLN02217 |
PLN02217 |
probable pectinesterase/pectinesterase inhibitor |
395-532 |
1.30e-05 |
|
probable pectinesterase/pectinesterase inhibitor
Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 50.47 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 395 PPQGTSETPG-FSSPPQVTTATLVSSSPPQVTSETpaSSSPTqvTSETPASSSPTQVTSDTPASnsppqgtsdtpgfssP 473
Cdd:PLN02217 551 PGKGVPYIPGlFAGNPGSTNSTPTGSAASSNTTFS--SDSPS--TVVAPSTSPPAGHLGSPPAT---------------P 611
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1039789998 474 TQVTTAtlvSSSPPQ----VTSDTPASSSPPQVTSDTPaSSSPPQVTSETPASSSPPQVTSDT 532
Cdd:PLN02217 612 SKIVSP---STSPPAshlgSPSTTPSSPESSIKVASTE-TASPESSIKVASTESSVSMVSMST 670
|
|
| motB |
PRK12799 |
flagellar motor protein MotB; Reviewed |
477-595 |
1.32e-05 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 50.10 E-value: 1.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 477 TTATLVSSSPPQVTSDTPASSSPPqvtsdTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTS 556
Cdd:PRK12799 307 SSAVTQSSAITPSSAAIPSPAVIP-----SSVTTQSATTTQASAVALSSAGVLPSDVTLPGTVALPAAEPVNMQPQPMST 381
|
90 100 110
....*....|....*....|....*....|....*....
gi 1039789998 557 ETPASSSPTNMtsdTPASSSPTNMTSDTPASSSPTNMTS 595
Cdd:PRK12799 382 TETQQSSTGNI---TSTANGPTTSLPAAPASNIPVSPTS 417
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
487-666 |
1.39e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 50.62 E-value: 1.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 487 PQVTSDT-PASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPT 565
Cdd:PRK07003 360 PAVTGGGaPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRG 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 566 N--MTSDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSPPWPVITEVTRPESTIPAGRSLANITSKAQEDSPLGVISTH 643
Cdd:PRK07003 440 DdaADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASRE 519
|
170 180
....*....|....*....|...
gi 1039789998 644 PQMSFQSSTSQQALDETAGERVP 666
Cdd:PRK07003 520 DAPAAAAPPAPEARPPTPAAAAP 542
|
|
| PLN02217 |
PLN02217 |
probable pectinesterase/pectinesterase inhibitor |
403-558 |
1.40e-05 |
|
probable pectinesterase/pectinesterase inhibitor
Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 50.47 E-value: 1.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 403 PGFSSPPQVTTATLVSSSPPQVTSETPASSspTQVTSETPASSSPTQ---VTSDTPASNSPPQGTSdTPGFSSPTQVTTA 479
Cdd:PLN02217 514 PGAAITKRVTWPGIKKLSDEEILKFTPAQY--IQGDAWIPGKGVPYIpglFAGNPGSTNSTPTGSA-ASSNTTFSSDSPS 590
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 480 TLV--SSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPqVTSDTSASISPPQVISDTPASSSPPQVTSE 557
Cdd:PLN02217 591 TVVapSTSPPAGHLGSPPATPSKIVSPSTSPPASHLGSPSTTPSSPESS-IKVASTETASPESSIKVASTESSVSMVSMS 669
|
.
gi 1039789998 558 T 558
Cdd:PLN02217 670 T 670
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
224-422 |
1.48e-05 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 50.14 E-value: 1.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 224 TGRPQVTSDTLASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSS 303
Cdd:COG3469 12 AGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 304 PPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQGTLDTPSS--SSPPQGTSDTPASSS 381
Cdd:COG3469 92 TSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSgtETATGGTTTTSTTTT 171
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1039789998 382 PPQGTSETPASNSPPQGTSETPGFSSPP-QVTTATLVSSSPP 422
Cdd:COG3469 172 TTSASTTPSATTTATATTASGATTPSATtTATTTGPPTPGLP 213
|
|
| PLN02217 |
PLN02217 |
probable pectinesterase/pectinesterase inhibitor |
468-628 |
1.59e-05 |
|
probable pectinesterase/pectinesterase inhibitor
Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 50.09 E-value: 1.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 468 PGFSSPTQVTTATLVSSSPPQVTSDTPASssppQVTSDT--PASSSP--PQVTSETPASSsppqvTSDTSASISPpqviS 543
Cdd:PLN02217 514 PGAAITKRVTWPGIKKLSDEEILKFTPAQ----YIQGDAwiPGKGVPyiPGLFAGNPGST-----NSTPTGSAAS----S 580
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 544 DTPASSSPPQvTSETPASSSPTNMTSDTPASSSpTNMTSDTPASSSPTNMTSDTPAS-SSPPWPVITEVTRPESTIPAGR 622
Cdd:PLN02217 581 NTTFSSDSPS-TVVAPSTSPPAGHLGSPPATPS-KIVSPSTSPPASHLGSPSTTPSSpESSIKVASTETASPESSIKVAS 658
|
....*.
gi 1039789998 623 SLANIT 628
Cdd:PLN02217 659 TESSVS 664
|
|
| DUF612 |
pfam04747 |
Protein of unknown function, DUF612; This family includes several uncharacterized proteins ... |
228-575 |
1.64e-05 |
|
Protein of unknown function, DUF612; This family includes several uncharacterized proteins from Caenorhabditis elegans.
Pssm-ID: 282585 [Multi-domain] Cd Length: 511 Bit Score: 50.06 E-value: 1.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 228 QVTSDTLASSSP-PQGTSDTPASSSPpQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSppqgTSDTPASSSPPQ 306
Cdd:pfam04747 181 KVANDRSAAPAPePKTPTNTPAEPAE-QVQEITGKKNKKNKKKSESEATAAPASVEQVVEQPKV----VTEEPHQQAAPQ 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 307 vtSATSASSSPPQGTSDTPASSSPPQvtsatsasssppqgtsdTPASSSPPqgtldtPSSSSPPQGTSDTPASSSppQGT 386
Cdd:pfam04747 256 --EKKNKKNKRKSESENVPAASETPV-----------------EPVVETTP------PASENQKKNKKDKKKSES--EKV 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 387 SETPASNSPPQgtSETPGFSSPPQVTTATLVSSSPPQVTSETPASssPTQVTSETPASSSPTQVTSdTPASNSPPQGTSD 466
Cdd:pfam04747 309 VEEPVQAEAPK--SKKPTADDNMDFLDFVTAKEEPKDEPAETPAA--PVEEVVENVVENVVEKSTT-PPATENKKKNKKD 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 467 TPGfSSPTQVTTATLVSS-SPPQVT----SDTPASSSPPQVTSDTPASSSPPQVtsETPASSSPPQVTSDTSASISPPQV 541
Cdd:pfam04747 384 KKK-SESEKVTEQPVESApAPPQVEqvveTTPPASENKKKNKKDKKKSESEKAV--EEPVQAAPSSKKPTADDNMDFLDF 460
|
330 340 350
....*....|....*....|....*....|....
gi 1039789998 542 ISDTPASSSPPQVTSETPASSSPTNMTSDTPASS 575
Cdd:pfam04747 461 VTAKPDKSESVEEHIAAPMIVEPAHADEETAAAA 494
|
|
| Mating_C |
pfam12737 |
C-terminal domain of homeodomain 1; Mating in fungi is controlled by the loci that determine ... |
361-632 |
1.65e-05 |
|
C-terminal domain of homeodomain 1; Mating in fungi is controlled by the loci that determine the mating type of an individual, and only individuals with differing mating types can mate. Basidiomycete fungi have evolved a unique mating system, termed tetrapolar or bifactorial incompatibility, in which mating type is determined by two unlinked loci; compatibility at both loci is required for mating to occur. The multi-allelic tetrapolar mating system is considered to be a novel innovation that could have only evolved once, and is thus unique to the mushroom fungi. This domain is C-terminal to the homeodomain transcription factor region.
Pssm-ID: 372279 [Multi-domain] Cd Length: 412 Bit Score: 49.60 E-value: 1.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 361 LDTPSSSSPPQGTSDTPASSSpPQGTSETPASNSPpqgtseTPGFSSPPQVTTATLVSSSPPQVTSEtpassspTQVTSE 440
Cdd:pfam12737 123 LDSPSSSSSPEKCLPSPAPSE-QEALSEISAACGP------TPSTLTPLNVAPSLTPSKKRKRCLSD-------GFDGPK 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 441 TPASSSPT---QVTSDT-PASNSPPQGTSDTPGFSSPtqvtTATLVSSSPPQVTSDTPASSSP-----------PQVTSD 505
Cdd:pfam12737 189 RPPNKRVQprpQTVSDPfPTSTSIPEWDEWLQNHMSP----SLTLHGDIPPPVSVEAPDSNTPldieifnfpyhPDLTPS 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 506 TPASSSPPQVTSETPASSSPP-------QVTSDTSASISPPQVISDTPAS----SSPPQVTSETPASSSPTNMTSDTPAS 574
Cdd:pfam12737 265 PAPSLSDSVIEVATPTTESDYmcngtlrQTFSWFEFDFPELIQPTNTPASnnelSLPFDPSTDIVVSRTILPLLDWRSQS 344
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1039789998 575 SSPTNMTSDTPA-----SSSPTnmTSDTPASSSPPWPVITEVTRPESTIPAGRSLANITSKAQ 632
Cdd:pfam12737 345 FLSQTFASPPHSilrsnSSSPD--VSAFALDLTPAFTPITYSLSESEKEAKRRELEELEARLQ 405
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
476-616 |
1.75e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.81 E-value: 1.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 476 VTTATLVSSSPPQVTSDTPASSSPPQvtsDTPASSSPPQVTSETPASSSPPQvtsdtsASISPPQVISDTPASSSPPqvt 555
Cdd:PRK14950 355 VIEALLVPVPAPQPAKPTAAAPSPVR---PTPAPSTRPKAAAAANIPPKEPV------RETATPPPVPPRPVAPPVP--- 422
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1039789998 556 seTPASSSPTNMTSDTPASSSPtnmTSDTPASSSPTNMTSDTPASS----SPPWPVITEVTRPES 616
Cdd:PRK14950 423 --HTPESAPKLTRAAIPVDEKP---KYTPPAPPKEEEKALIADGDVleqlEAIWKQILRDVPPRS 482
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
474-620 |
1.81e-05 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 50.04 E-value: 1.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 474 TQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSP----------PQVTSETPASSSPPQVTSDTSASIS-----P 538
Cdd:PRK10811 848 VRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPvveavaevveEPVVVAEPQPEEVVVVETTHPEVIAapvteQ 927
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 539 PQVISDTPASssppqVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSPPWPVITEVTRPESTI 618
Cdd:PRK10811 928 PQVITESDVA-----VAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVA 1002
|
..
gi 1039789998 619 PA 620
Cdd:PRK10811 1003 PA 1004
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
356-555 |
1.92e-05 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 49.92 E-value: 1.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 356 PPQGTLDTPSSSSPPQG----------TSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVttatlvssSPPQVT 425
Cdd:PLN03209 382 PPTSPIPTPPSSSPASSksvdavakpaEPDVVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDL--------KPPTSP 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 426 SETPASSSPTQVTSETPASSSPtqvtsDTPASNSPPQGTSDTPGFSSPtqvTTATLVSSSPPQVTSDTPASSSPPQVTSD 505
Cdd:PLN03209 454 SPTAPTGVSPSVSSTSSVPAVP-----DTAPATAATDAAAPPPANMRP---LSPYAVYDDLKPPTSPSPAAPVGKVAPSS 525
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1039789998 506 TPAssSPPQVTSETPASSSPPQVTSDTSAS-ISPPQVISDT--PASSSPPQVT 555
Cdd:PLN03209 526 TNE--VVKVGNSAPPTALADEQHHAQPKPRpLSPYTMYEDLkpPTSPTPSPVL 576
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
226-466 |
2.02e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 49.98 E-value: 2.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 226 RPQVTSDTLASSSPPQGTSDTPASSSPPQVTSAtsasssppqGTSDTPASSSPPqvtsatsasssppqgtSDTPASSSPP 305
Cdd:PRK07764 583 QVEAVVGPAPGAAGGEGPPAPASSGPPEEAARP---------AAPAAPAAPAAP----------------APAGAAAAPA 637
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 306 QVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQgtlDTPSSSSPPQGTSDTPASSSPPQG 385
Cdd:PRK07764 638 EASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAP---AAPAGAAPAQPAPAPAATPPAGQA 714
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 386 TSETPASNSPPQGTSETPGFSS-----PPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSP 460
Cdd:PRK07764 715 DDPAAQPPQAAQGASAPSPAADdpvplPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMD 794
|
....*.
gi 1039789998 461 PQGTSD 466
Cdd:PRK07764 795 DEDRRD 800
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
348-636 |
2.17e-05 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 48.70 E-value: 2.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 348 SDTPAS--SSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGT-------SETPASNSPPQGTSetPGFSSPPqvttatlVS 418
Cdd:PHA02682 19 ADTSSSlfTKCPQATIPAPAAPCPPDADVDPLDKYSVKEAGryyqsrlKANSACMQRPSGQS--PLAPSPA-------CA 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 419 SSPPQVTSETPASSSPTqVTSETPASSSPTqvtsdTPASNSPPQGTSDTPGfssptqvttatlvsssppqvtsdTPASSS 498
Cdd:PHA02682 90 APAPACPACAPAAPAPA-VTCPAPAPACPP-----ATAPTCPPPAVCPAPA-----------------------RPAPAC 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 499 PPQVTSDTPAsssPPQVTSEtPASSSPPQVTSDtsaSISPPQVisdtPASSSPpqvTSETPASSSPT------------- 565
Cdd:PHA02682 141 PPSTRQCPPA---PPLPTPK-PAPAAKPIFLHN---QLPPPDY----PAASCP---TIETAPAASPVlepripdkiidad 206
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1039789998 566 NMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSppwpviteVTrpESTIPAGRSLANITSKAQEDSP 636
Cdd:PHA02682 207 NDDKDLIKKELADIADSVRDLNAESLSLTRDIENAKS--------TT--QAAIDDLRRLLTGGGVARRDTP 267
|
|
| PRK11907 |
PRK11907 |
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; |
508-599 |
2.80e-05 |
|
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 49.47 E-value: 2.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 508 ASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDT-PASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPA 586
Cdd:PRK11907 18 LTASNPKLAQAEEIVTTTPATSTEAEQTTPVESDATEEaDNTETPVAATTAAEAPSSSETAETSDPTSEATDTTTSEART 97
|
90
....*....|...
gi 1039789998 587 SSSPTnmTSDTPA 599
Cdd:PRK11907 98 VTPAA--TETSKP 108
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
436-638 |
2.82e-05 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 49.15 E-value: 2.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 436 QVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQvtSDTPASsspPQVTSDTPASSSPPQV 515
Cdd:PLN03209 304 EVIAETTAPLTPMEELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPI--EEEPPQ---PKAVVPRPLSPYTAYE 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 516 TSETPASSSPPQVTSDTSAS-----ISPPQVISDTPASSSPPQV------TSET-----------------PASSSPTNM 567
Cdd:PLN03209 379 DLKPPTSPIPTPPSSSPASSksvdaVAKPAEPDVVPSPGSASNVpevepaQVEAkktrplspyaryedlkpPTSPSPTAP 458
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1039789998 568 TSDTPASSSPT--NMTSDTPASSSPTNMTSDTPASSSP--PWPVITEVTRPESTIPAGRSLANITSKAQEDSPLG 638
Cdd:PLN03209 459 TGVSPSVSSTSsvPAVPDTAPATAATDAAAPPPANMRPlsPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVG 533
|
|
| KAR9 |
pfam08580 |
Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal ... |
322-589 |
2.87e-05 |
|
Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules. KAR9 localizes at the shmoo tip in mating cells and at the tip of the growing bud in anaphase.
Pssm-ID: 430088 [Multi-domain] Cd Length: 684 Bit Score: 49.44 E-value: 2.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 322 SDTPASSSPPQvtsatsasssppqgTSDTPASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQG-TS 400
Cdd:pfam08580 427 NKTPGSSPPSS--------------VIMTPVNKGSKTPSSRRGSSFDFGSSSERVINSKLRRESKLPQIASTLKQTKrPS 492
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 401 ETPGFSSPPQVTtatlvSSSPPQ-VTSETPA-SSSPTQVTSETPASSSPTQVTSDTPASNSPPQ-GTSDTPGFSSPTQVT 477
Cdd:pfam08580 493 KIPRASPNHSGF-----LSTPSNtATSETPTpALRPPSRPQPPPPGNRPRWNASTNTNDLDVGHnFKPLTLTTPSPTPSR 567
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 478 TATLVSSSPPQVTSDTPASSSPpqVTSDTPASSSPPQVTSETPASSSPPQvtsdtsasiSPPQVISDTPASSSP-PQVTS 556
Cdd:pfam08580 568 SSRSSSTLPPVSPLSRDKSRSP--APTCRSVSRASRRRASRKPTRIGSPN---------SRTSLLDEPPYPKLTlSKGLP 636
|
250 260 270
....*....|....*....|....*....|...
gi 1039789998 557 ETPASSSPTNMTSDTPASSSPTNMTSDTPASSS 589
Cdd:pfam08580 637 RTPRNRQSYAGTSPSRSVSVSSGLGPQTRPGTS 669
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
413-520 |
2.90e-05 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 48.58 E-value: 2.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 413 TATLVSSSPPQVTSETPASSSPTQV--TSETPASSSPTQVTSDTPASNsppQGTSDTPGFSSPTQVTTATLVSSSPPQVT 490
Cdd:PRK13335 55 TAGANSATTQAANTRQERTPKLEKApnTNEEKTSASKIEKISQPKQEE---QKSLNISATPAPKQEQSQTTTESTTPKTK 131
|
90 100 110
....*....|....*....|....*....|....*
gi 1039789998 491 SDTPASSSPPQ----VTSDTPASSSPPQVTSE-TP 520
Cdd:PRK13335 132 VTTPPSTNTPQpmqsTKSDTPQSPTIKQAQTDmTP 166
|
|
| KAR9 |
pfam08580 |
Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal ... |
414-621 |
2.96e-05 |
|
Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules. KAR9 localizes at the shmoo tip in mating cells and at the tip of the growing bud in anaphase.
Pssm-ID: 430088 [Multi-domain] Cd Length: 684 Bit Score: 49.44 E-value: 2.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 414 ATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQV-----TSDTPASNSP-----PQGTSDTPGFSSPTQVTTATLVS 483
Cdd:pfam08580 422 ATLVANKTPGSSPPSSVIMTPVNKGSKTPSSRRGSSFdfgssSERVINSKLRresklPQIASTLKQTKRPSKIPRASPNH 501
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 484 SSPPQVTSDTPASSSPpqvtsdTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSS 563
Cdd:pfam08580 502 SGFLSTPSNTATSETP------TPALRPPSRPQPPPPGNRPRWNASTNTNDLDVGHNFKPLTLTTPSPTPSRSSRSSSTL 575
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1039789998 564 PTNMTSDTPASSSPT-NMTSDTPASSSPTNMTSDTPASSSPPWPVITEVTRPESTIPAG 621
Cdd:pfam08580 576 PPVSPLSRDKSRSPApTCRSVSRASRRRASRKPTRIGSPNSRTSLLDEPPYPKLTLSKG 634
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
426-565 |
2.97e-05 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 48.79 E-value: 2.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 426 SETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPG--FSSPTQVTTATLVSSSPPQVTSDTPA-SSSPPQV 502
Cdd:PTZ00436 208 AAAPSGKKSAKAAAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAkaAAPPAKAAAPPAKAAAPPAKAAAPPAkAAAPPAK 287
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1039789998 503 TSDTPASSSppqvTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPT 565
Cdd:PTZ00436 288 AAAPPAKAA----AAPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAA 346
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
472-564 |
3.00e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.04 E-value: 3.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 472 SPTQVTTATLVSSSPPQVTsDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSAsisPPQVISDTPASSSP 551
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVR-PTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPH---TPESAPKLTRAAIP 437
|
90
....*....|...
gi 1039789998 552 PQVTSETPASSSP 564
Cdd:PRK14950 438 VDEKPKYTPPAPP 450
|
|
| PRK11907 |
PRK11907 |
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; |
534-633 |
3.13e-05 |
|
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 49.47 E-value: 3.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 534 ASISPPQVISDTPASSSPPQvTSETPASSSPTnmtsDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSPPWPVITEVTR 613
Cdd:PRK11907 18 LTASNPKLAQAEEIVTTTPA-TSTEAEQTTPV----ESDATEEADNTETPVAATTAAEAPSSSETAETSDPTSEATDTTT 92
|
90 100
....*....|....*....|
gi 1039789998 614 PEStiPAGRSLANITSKAQE 633
Cdd:PRK11907 93 SEA--RTVTPAATETSKPVE 110
|
|
| SP4_N |
cd22536 |
N-terminal domain of transcription factor Specificity Protein (SP) 4; Specificity Proteins ... |
345-655 |
3.21e-05 |
|
N-terminal domain of transcription factor Specificity Protein (SP) 4; Specificity Proteins (SPs) are transcription factors that are involved in many cellular processes, including cell differentiation, cell growth, apoptosis, immune responses, response to DNA damage, and chromatin remodeling. Human SP4 is a risk gene of multiple psychiatric disorders including schizophrenia, bipolar disorder, and major depression. SP4 belongs to a family of proteins, called the SP/Kruppel or Krueppel-like Factor (KLF) family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. SP factors preferentially bind GC boxes, while KLFs bind CACCC boxes. Another characteristic hallmark of SP factors is the presence of the Buttonhead (BTD) box CXCPXC, just N-terminal to the zinc fingers. The function of the BTD box is unknown, but it is thought to play an important physiological role. Another feature of most SP factors is the presence of a conserved amino acid stretch, the so-called SP box, located close to the N-terminus. SP factors may be separated into three groups based on their domain architecture and the similarity of their N-terminal transactivation domains: SP1-4, SP5, and SP6-9. The transactivation domains between the three groups are not homologous to one another. SP1-4 have similar N-terminal transactivation domains characterized by glutamine-rich regions, which, in most cases, have adjacent serine/threonine-rich regions. This model represents the N-terminal domain of SP4.
Pssm-ID: 411773 [Multi-domain] Cd Length: 623 Bit Score: 49.15 E-value: 3.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 345 QGTSDTPASSSPPQGTldtpSSSSPPQGTSDTPASSSPPQGTSETPASNSP-PQGTSEtpgFSSPPQVTTatlVSSSPPQ 423
Cdd:cd22536 90 QGVSAATSSAAPSSSN----NGSTSPTKVKAGNSNASAPGQFQVIQVQNMQnPSGSVQ---YQVIPQIQT---VEGQQIQ 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 424 VTSETPASSSPTQVTSE-TPASS--SPTQVTSDTPASNSPPQGTSDT-------PGFSSPTQVTTatlVSSSPPQVTSDT 493
Cdd:cd22536 160 ISPANATALQDLQGQIQlIPAGNnqAILTTPNRTASGNIIAQNLANQtvpvqirPGVSIPLQLQT---IPGAQAQVVTTL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 494 PASSSppQVTSDTPasssppqVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMT----- 568
Cdd:cd22536 237 PINIG--GVTLALP-------VINNVAAGGGSGQLVQPSDGGVSNGNQLVSTPITTASVSTMPESPSSSTTCTTTastsl 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 569 --SDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSPPWPVI-TEVTRPESTIPAGRSLANITSKAQE--------DSPL 637
Cdd:cd22536 308 tsSDTLVSSAETGQYASTAASSERTEEEPQTSAAESEAQSSSqLQSNGLQNVQDQSNSLQQVQIVGQPilqqiqiqQPQQ 387
|
330
....*....|....*...
gi 1039789998 638 GVISTHPQMSFQSSTSQQ 655
Cdd:cd22536 388 QIIQAIQPQSFQLQSGQT 405
|
|
| PRK12727 |
PRK12727 |
flagellar biosynthesis protein FlhF; |
358-566 |
3.80e-05 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 237182 [Multi-domain] Cd Length: 559 Bit Score: 48.83 E-value: 3.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 358 QGTLDTPSSSSP--PQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPT 435
Cdd:PRK12727 52 QRALETARSDTPatAAAPAPAPQAPTKPAAPVHAPLKLSANANMSQRQRVASAAEDMIAAMALRQPVSVPRQAPAAAPVR 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 436 QVTSETPAssspTQVTSDTPASNSPPQGTSDTPgfSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQV 515
Cdd:PRK12727 132 AASIPSPA----AQALAHAAAVRTAPRQEHALS--AVPEQLFADFLTTAPVPRAPVQAPVVAAPAPVPAIAAALAAHAAY 205
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1039789998 516 TSETPASSSPPQVTSDTS--ASISPPQVISDTPASSSPPQVTSETPASSSPTN 566
Cdd:PRK12727 206 AQDDDEQLDDDGFDLDDAlpQILPPAALPPIVVAPAAPAALAAVAAAAPAPQN 258
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
411-549 |
3.94e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 48.65 E-value: 3.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 411 VTTATLVSSSPPQvtSETPASSSPTQVTsETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATlvsSSPPQVT 490
Cdd:PRK14950 355 VIEALLVPVPAPQ--PAKPTAAAPSPVR-PTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPV---PHTPESA 428
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1039789998 491 SDTPASSSPPQVtsdTPASSSPPQVTSETPASSSPPQVTSDTSASIspPQVISDTPASS 549
Cdd:PRK14950 429 PKLTRAAIPVDE---KPKYTPPAPPKEEEKALIADGDVLEQLEAIW--KQILRDVPPRS 482
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
225-461 |
4.46e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 48.69 E-value: 4.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 225 GRPQVTSDTLASSSPPQGTSDTPASSSP-PQVTSATSASSSPPQGTSDTPASSSppQVTSATSASSSPPQGTSDTPASSS 303
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALaPKAAAAAAATRAEAPPAAPAPPATA--DRGDDAADGDAPVPAKANARASAD 460
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 304 PPqvTSATSASSSPPQGTSDTPASSSPPQVTSATSasssppqgTSDTPASSSPPQGTLDTPSSSSPPQGTSDTPASSSPP 383
Cdd:PRK07003 461 SR--CDERDAQPPADSGSASAPASDAPPDAAFEPA--------PRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAP 530
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 384 QGTSETPASNSPP---------------------QGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETP 442
Cdd:PRK07003 531 EARPPTPAAAAPAaraggaaaaldvlrnagmrvsSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDAPP 610
|
250
....*....|....*....
gi 1039789998 443 ASSSPTQVTSDTPASnSPP 461
Cdd:PRK07003 611 NGAARAEQAAESRGA-PPP 628
|
|
| PHA02732 |
PHA02732 |
hypothetical protein; Provisional |
355-609 |
4.61e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 165099 [Multi-domain] Cd Length: 1467 Bit Score: 48.98 E-value: 4.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 355 SPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSP-PQGTSETPGFS-SPPQVTTATLVSSSPPQ----VTSET 428
Cdd:PHA02732 1074 SPSYIFLNSWASSYVAPGFLGSPYALPYFMNQTSALVGNTAlPKGLNVFSGYMfGAGTVASAFLYMNSTPQspvlALLLA 1153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 429 PASSSPTQVTSETPASSSPTQVTSDTP------ASNSPPQG----TSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSS 498
Cdd:PHA02732 1154 PYISYKFNALSLGFSITADAAIFSLFGipapqlLSSYIPTGsvlyQDPIFTYIPPGIIGMSGTNTFTFKAAQLQLSAASS 1233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 499 PPQVTSDTPASSSPPQVTSETpASSSPP--QVTSDTSASISPPQVISdtPASSSPP--QVTSETPASSSPTNMTS-DTPA 573
Cdd:PHA02732 1234 PPAATTPTPPPSSSSSSSAQS-ISTSPGqiQIVLNGSTTIHINFLFF--PALSTPKigQILAMPIVNSSGAFISLyVNSA 1310
|
250 260 270
....*....|....*....|....*....|....*.
gi 1039789998 574 SSSPTNMTSDTPASSSPTNMTSDTPASSSPPWPVIT 609
Cdd:PHA02732 1311 ISANFNVTIEYVFSNGTVIKRFTDEPGQIFPLPLIN 1346
|
|
| PRK11907 |
PRK11907 |
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; |
405-521 |
4.74e-05 |
|
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 48.70 E-value: 4.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 405 FSSPPQVTTATLVSSSPPQVTSETPASssptqvtseTPASSSPTQVTSDTPASNSppqGTSDTPGFSSPTQVTTATLVSS 484
Cdd:PRK11907 6 FSKSAVALTLALLTASNPKLAQAEEIV---------TTTPATSTEAEQTTPVESD---ATEEADNTETPVAATTAAEAPS 73
|
90 100 110
....*....|....*....|....*....|....*..
gi 1039789998 485 SPPQVTSDTPASSSPPQVTSDTPasSSPPQVTSETPA 521
Cdd:PRK11907 74 SSETAETSDPTSEATDTTTSEAR--TVTPAATETSKP 108
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
471-591 |
5.05e-05 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 48.02 E-value: 5.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 471 SSPTQVTTATLVSSSPPQVTSDTPA-SSSPPQVTSDTPA-SSSPPQVTSETP--ASSSPPQVTSDTSASISPPQVISDTP 546
Cdd:PTZ00436 220 AAPAKAAAAPAKAAAPPAKAAAAPAkAAAAPAKAAAPPAkAAAPPAKAAAPPakAAAPPAKAAAPPAKAAAPPAKAAAAP 299
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1039789998 547 A-SSSPPQVTSETPA-SSSPTNMTSDTPASSSPTNMTSDTPASSSPT 591
Cdd:PTZ00436 300 AkAAAAPAKAAAAPAkAAAPPAKAAAPPAKAATPPAKAAAPPAKAAA 346
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
448-585 |
5.29e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 48.23 E-value: 5.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 448 TQVTSDTPASNSPPQGTSdtPGFS---SPTQVTTATLVSSSPPQvTSDTPASSSPPQVTsdtPASSSPPQVtSETPASSS 524
Cdd:PRK14971 363 TQKGDDASGGRGPKQHIK--PVFTqpaAAPQPSAAAAASPSPSQ-SSAAAQPSAPQSAT---QPAGTPPTV-SVDPPAAV 435
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1039789998 525 PPQVTSDTSASISPPQVISDTPASSSppQVTSETPASSSPTNMTSDTPASSSPTNMTSDTP 585
Cdd:PRK14971 436 PVNPPSTAPQAVRPAQFKEEKKIPVS--KVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQK 494
|
|
| PRK11907 |
PRK11907 |
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; |
470-573 |
5.33e-05 |
|
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 48.70 E-value: 5.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 470 FSSPTQVTTATLVSSSPPQVTSDTPASSSPPqvTSDTPASSSPPQVTSET---PASSSPPQVTSDTSASISPPQVISDTP 546
Cdd:PRK11907 6 FSKSAVALTLALLTASNPKLAQAEEIVTTTP--ATSTEAEQTTPVESDATeeaDNTETPVAATTAAEAPSSSETAETSDP 83
|
90 100
....*....|....*....|....*..
gi 1039789998 547 ASSSPPQVTSETPASSSPTnmTSDTPA 573
Cdd:PRK11907 84 TSEATDTTTSEARTVTPAA--TETSKP 108
|
|
| Metaviral_G |
pfam09595 |
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. ... |
521-635 |
5.47e-05 |
|
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. It is high in serine and threonine suggesting it is highly glycosylated.
Pssm-ID: 462833 [Multi-domain] Cd Length: 183 Bit Score: 46.10 E-value: 5.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 521 ASSSPPQVTSDTSASISPpQVISDTPASSSPPQVTSETP-----ASSSPT--------NMTSDTPASSSPTNMTSDTPAS 587
Cdd:pfam09595 31 ASLILIGESNKEAALIIT-DIIDININKQHPEQEHHENPplneaAKEAPSesedapdiDPNNQHPSQDRSEAPPLEPAAK 109
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1039789998 588 SSPT----NMTSDTPASSSPPWPVITEVTRPESTIPAGRSLANITSKAQEDS 635
Cdd:pfam09595 110 TKPSehepANPPDASNRLSPPDASTAAIREARTFRKPSTGKRNNPSSAQSDQ 161
|
|
| motB |
PRK12799 |
flagellar motor protein MotB; Reviewed |
373-504 |
5.48e-05 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 48.17 E-value: 5.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 373 TSDTPASSSPPqgTSETPASNSPPQGTSETPGfssppQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTS 452
Cdd:PRK12799 296 HGTVPVAAVTP--SSAVTQSSAITPSSAAIPS-----PAVIPSSVTTQSATTTQASAVALSSAGVLPSDVTLPGTVALPA 368
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1039789998 453 DTPASNSPPQGTSDTPGFSSPTQVTTATlvsSSPPQVTSDTPASSSPPQVTS 504
Cdd:PRK12799 369 AEPVNMQPQPMSTTETQQSSTGNITSTA---NGPTTSLPAAPASNIPVSPTS 417
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
293-521 |
5.67e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 48.33 E-value: 5.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 293 QGTSDTPASSSPPQVTSATSASSSPpqgTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQGTLDTPSSSSPPQG 372
Cdd:PRK12323 368 SGGGAGPATAAAAPVAQPAPAAAAP---AAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGP 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 373 TSDTPASSSPPQgtseTPASNSPPQgtsetpgfSSPPQVTTATLVSSSPPQvtseTPASSSPTQVTSETPASSSPTQVTS 452
Cdd:PRK12323 445 GGAPAPAPAPAA----APAAAARPA--------AAGPRPVAAAAAAAPARA----APAAAPAPADDDPPPWEELPPEFAS 508
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1039789998 453 DTPASNSPPQGTSDTPGFSSP-TQVTTATLVSSSPPQVTSDTPASSSP-----PQVTSDTPASSSPPQVTSETPA 521
Cdd:PRK12323 509 PAPAQPDAAPAGWVAESIPDPaTADPDDAFETLAPAPAAAPAPRAAAAtepvvAPRPPRASASGLPDMFDGDWPA 583
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
347-580 |
5.74e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 48.53 E-value: 5.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 347 TSDTPASSSPPQgTLDTPSSSSPPQgtsdTPASSSPPQGTsETPASNSPPQgtSETPGFSspPQVTTATLVSSSppqvts 426
Cdd:PTZ00449 617 LLDIPKSPKRPE-SPKSPKRPPPPQ----RPSSPERPEGP-KIIKSPKPPK--SPKPPFD--PKFKEKFYDDYL------ 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 427 eTPASSSPTQVTSETPASSSPTQVTSDTPASNSPPqgtSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASS---SPPQVT 503
Cdd:PTZ00449 681 -DAAAKSKETKTTVVLDESFESILKETLPETPGTP---FTTPRPLPPKLPRDEEFPFEPIGDPDAEQPDDIeffTPPEEE 756
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 504 S----DTPASSSPPQVTSETPASsspPQVTSDTSASISP------PQVISDTPASSSP--PQ--------VTSETPASSS 563
Cdd:PTZ00449 757 RtffhETPADTPLPDILAEEFKE---EDIHAETGEPDEAmkrpdsPSEHEDKPPGDHPslPKkrhrldglALSTTDLESD 833
|
250
....*....|....*..
gi 1039789998 564 PTNMTSDtpASSSPTNM 580
Cdd:PTZ00449 834 AGRIAKD--ASGKIVKL 848
|
|
| Metaviral_G |
pfam09595 |
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. ... |
353-472 |
6.30e-05 |
|
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. It is high in serine and threonine suggesting it is highly glycosylated.
Pssm-ID: 462833 [Multi-domain] Cd Length: 183 Bit Score: 46.10 E-value: 6.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 353 SSSPPQGTLDTPSSSSPPQGTSDtPASSSPPQGTSETPASNSppqGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASS 432
Cdd:pfam09595 66 ENPPLNEAAKEAPSESEDAPDID-PNNQHPSQDRSEAPPLEP---AAKTKPSEHEPANPPDASNRLSPPDASTAAIREAR 141
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1039789998 433 SPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSS 472
Cdd:pfam09595 142 TFRKPSTGKRNNPSSAQSDQSPPRANHEAIGRANPFAMSS 181
|
|
| Metaviral_G |
pfam09595 |
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. ... |
483-604 |
6.92e-05 |
|
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. It is high in serine and threonine suggesting it is highly glycosylated.
Pssm-ID: 462833 [Multi-domain] Cd Length: 183 Bit Score: 45.72 E-value: 6.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 483 SSSPPQVTSDTpASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASS 562
Cdd:pfam09595 32 SLILIGESNKE-AALIITDIIDININKQHPEQEHHENPPLNEAAKEAPSESEDAPDIDPNNQHPSQDRSEAPPLEPAAKT 110
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1039789998 563 SPT----NMTSDTPASSSPTNMTSDTPASSS----PTNMTSDTPAS----SSPP 604
Cdd:pfam09595 111 KPSehepANPPDASNRLSPPDASTAAIREARtfrkPSTGKRNNPSSaqsdQSPP 164
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
507-660 |
6.93e-05 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 47.74 E-value: 6.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 507 PASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPA----SSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTS 582
Cdd:pfam05539 169 KTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATAnqrlSSTEPVGTQGTTTSSNPEPQTEPPPSQRGPSGSPQ 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 583 DTPASSSP-TNMTSD----TPASSSPPWPVITEVTRPESTIPAgrslaniTSKAQED-----SPLGVISTHPQMSFQSST 652
Cdd:pfam05539 249 HPPSTTSQdQSTTGDgqehTQRRKTPPATSNRRSPHSTATPPP-------TTKRQETgrptpRPTATTQSGSSPPHSSPP 321
|
....*...
gi 1039789998 653 SQQALDET 660
Cdd:pfam05539 322 GVQANPTT 329
|
|
| PLN02983 |
PLN02983 |
biotin carboxyl carrier protein of acetyl-CoA carboxylase |
365-554 |
7.80e-05 |
|
biotin carboxyl carrier protein of acetyl-CoA carboxylase
Pssm-ID: 215533 [Multi-domain] Cd Length: 274 Bit Score: 46.76 E-value: 7.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 365 SSSSPpqgtsdTPASSSPPQGTSETPASNSppQGTSETPGFSSPPQVTTATLVSSSPPQVTS-ETPASSSPTQVTSETPA 443
Cdd:PLN02983 3 SLSVP------CAKTAAAAANVGSRLSRSS--FRLQPKPNISFPSKGPNPKRSAVPKVKAQLnEVAVDGSSNSAKSDDPK 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 444 SSSPTQVTSDTPASNSPPQGTSDTPGFSSP--TQVTT------------------------------------ATLVSSS 485
Cdd:PLN02983 75 SEVAPSEPKDEPPSNSSSKPNLPDEESISEfmTQVSSlvklvdsrdivelqlkqldcelvirkkealpqppppAPVVMMQ 154
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1039789998 486 PPQVTSDTPASSSPPQVTSDTPASSSPPqvtseTPASSSPPQVTSDTSASISPPQ--VISDTPASSSPPQV 554
Cdd:PLN02983 155 PPPPHAMPPASPPAAQPAPSAPASSPPP-----TPASPPPAKAPKSSHPPLKSPMagTFYRSPAPGEPPFV 220
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
481-577 |
7.89e-05 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 46.93 E-value: 7.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 481 LVSSSPPQVTSDTPASSSPPQVTSDTPaSSSPPQVTSETPASSspPQVTSDTSASISPPQvisDTPASSSPPQVTSETPa 560
Cdd:PRK13042 15 LLTTGVITTTTQAANATTPSSTKVEAP-QSTPPSTKVEAPQSK--PNATTPPSTKVEAPQ---QTPNATTPSSTKVETP- 87
|
90
....*....|....*..
gi 1039789998 561 sSSPTnmTSDTPASSSP 577
Cdd:PRK13042 88 -QSPT--TKQVPTEINP 101
|
|
| SAP130_C |
pfam16014 |
Histone deacetylase complex subunit SAP130 C-terminus; |
415-590 |
7.98e-05 |
|
Histone deacetylase complex subunit SAP130 C-terminus;
Pssm-ID: 464973 [Multi-domain] Cd Length: 371 Bit Score: 47.24 E-value: 7.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 415 TLVSSSPPQVTSETPA-----SSSPTQVTSETPASSSPTQVT---SDTPASNSPPqgTSDTPGFSSPTQVTTATlVSSSP 486
Cdd:pfam16014 1 ALGSSPRPSILRKKPAtegakPKPDIHVAVAPPVTVAVEALPgqnSEQQTASASP--PSQHPAQAIPTILAPAA-PPSQP 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 487 PQVTSDTPASS--SPPQVTSDTPASSSPPQvtsetPASSSPPQ-VTSDTSASISPPQVISDTPASSSPPQVTSETPASSs 563
Cdd:pfam16014 78 SVVLSTLPAAMavTPPIPASMANVVAPPTQ-----PAASSTAAcAVSSVLPEIKIKQEAEPMDTSQSVPPLTPTSISPA- 151
|
170 180
....*....|....*....|....*..
gi 1039789998 564 ptnMTSDTPASSSPtnmTSDTPASSSP 590
Cdd:pfam16014 152 ---LTSLANNLSVP---AGDLLPGASP 172
|
|
| KLF12_N |
cd21441 |
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as ... |
555-603 |
8.23e-05 |
|
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as Krueppel-like transcription factor 12, KLF12) regulates, by transcriptionally repressing Nur77 expression, endometrial decidualization, which is a prerequisite for successful implantation and the establishment of pregnancy. It is involved in the maturation processes of kidney collecting ducts after birth, and is able to increase the promoter activity of the UT-A1 urea transporter promoter by binding to the CACCC motif. KLF12 has also been found to promote colorectal cancer growth is also involved in the invasion and apoptosis of basal-like breast carcinoma. KLF12 belongs to a family of proteins called the Specificity Protein (SP)/KLF family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. Although these factors bind to similar elements in vitro, they have distinct activities in vivo depending on their expression profile and the sequence of the N-terminal activation/repression domain, which differ between members. KLF12 contains an N-terminal domain that is related to the N-terminal repression domain of KLF8.
Pssm-ID: 410608 [Multi-domain] Cd Length: 197 Bit Score: 45.77 E-value: 8.23e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1039789998 555 TSETPASSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSP 603
Cdd:cd21441 65 TSPTAVSSSPVSMTASASPSSSSSSSSSSSRPASSPTVITSVSSASSVP 113
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
321-609 |
8.29e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.84 E-value: 8.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 321 TSDTPA-------SSSPPQVTSATSASSSPPQGTSDTPASSSPPQgtLDTPSSSSPPQgtSDTPASSSPPQgtSETPASN 393
Cdd:NF033839 280 TQDTPKepgnkkpSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQ--LEKPKPEVKPQ--PEKPKPEVKPQ--LETPKPE 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 394 SPPQGTSETPGFSSPPQvttaTLVSSSPPQVTSETPasssptQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFsSP 473
Cdd:NF033839 354 VKPQPEKPKPEVKPQPE----KPKPEVKPQPETPKP------EVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEV-KP 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 474 TQVTTATLVSSSPPqvtsdTPASSSPPQvtSDTPASSSPPQvtSETPASSSPPQVtsdtsasisppqvisDTPASSSPPQ 553
Cdd:NF033839 423 QPEKPKPEVKPQPE-----KPKPEVKPQ--PEKPKPEVKPQ--PETPKPEVKPQP---------------EKPKPEVKPQ 478
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1039789998 554 VTSETPASSSPtnmTSDTPASSSPTNMTSDTPAS--SSPTNMTSDTPASSSPPWPVIT 609
Cdd:NF033839 479 PEKPKPDNSKP---QADDKKPSTPNNLSKDKQPSnqASTNEKATNKPKKSLPSTGSIS 533
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
457-551 |
8.31e-05 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 46.94 E-value: 8.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 457 SNSPPQGTSDTPgfSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASI 536
Cdd:PRK10856 159 GQSVPLDTSTTT--DPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAP 236
|
90
....*....|....*
gi 1039789998 537 SPPQVISDTPASSSP 551
Cdd:PRK10856 237 LPTDQAGVSTPAADP 251
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
353-550 |
8.84e-05 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 47.48 E-value: 8.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 353 SSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETpgfSSPPQVTTATLVSSSPPQVTSETPASS 432
Cdd:PRK08581 129 LNSDISDYEQPRNSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPS---SNNTKPSTSNKQPNSPKPTQPNQSNSQ 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 433 SPTQVTSETPASSSPTQVTSDTPASNSPPQgtsdtpgFSSPTQVTTATLVSSSPPQVTSdTPASSSPPQVTSDTPASSSP 512
Cdd:PRK08581 206 PASDDTANQKSSSKDNQSMSDSALDSILDQ-------YSEDAKKTQKDYASQSKKDKTE-TSNTKNPQLPTQDELKHKSK 277
|
170 180 190
....*....|....*....|....*....|....*...
gi 1039789998 513 PQVTSETPAssspPQVTSDTSASISPPQVISDTPASSS 550
Cdd:PRK08581 278 PAQSFENDV----NQSNTRSTSLFETGPSLSNNDDSGS 311
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
451-538 |
9.31e-05 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 46.94 E-value: 9.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 451 TSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTS 530
Cdd:PRK10856 164 LDTSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAG 243
|
....*...
gi 1039789998 531 DTSASISP 538
Cdd:PRK10856 244 VSTPAADP 251
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
361-450 |
9.73e-05 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 46.94 E-value: 9.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 361 LDTPSSSSP-PQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTS 439
Cdd:PRK10856 164 LDTSTTTDPaTTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAG 243
|
90
....*....|.
gi 1039789998 440 ETPASSSPTQV 450
Cdd:PRK10856 244 VSTPAADPNAL 254
|
|
| Hamartin |
pfam04388 |
Hamartin protein; This family includes the hamartin protein which is thought to function as a ... |
205-585 |
9.79e-05 |
|
Hamartin protein; This family includes the hamartin protein which is thought to function as a tumour suppressor. The hamartin protein interacts with the tuberin protein pfam03542. Tuberous sclerosis complex (TSC) is an autosomal dominant disorder and is characterized by the presence of hamartomas in many organs, such as brain, skin, heart, lung, and kidney. It is caused by mutation either TSC1 or TSC2 tumour suppressor gene. TSC1 encodes a protein, hamartin, containing two coiled-coil regions, which have been shown to mediate binding to tuberin. The TSC2 gene codes for tuberin pfam03542. These two proteins function within the same pathway(s) regulating cell cycle, cell growth, adhesion, and vesicular trafficking.
Pssm-ID: 461287 [Multi-domain] Cd Length: 730 Bit Score: 47.74 E-value: 9.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 205 DPASSAPPKATHRMTITSLTGrpqvTSDTLASSSPPQGTSDTPASSSPPQVTsatsasssppqGTSDTPASS-----SPP 279
Cdd:pfam04388 288 YGSSTSTPSSTPRLQLSSSSG----TSPPYLSPPSIRLKTDSFPLWSPSSVC-----------GMTTPPTSPgmvptTPS 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 280 QVTSATSASSSPPQGTSD---------TPASSSPPQvtsatsasssppqgTSDTPASSSPPQVTSatsasssppqgtsdt 350
Cdd:pfam04388 353 ELSPSSSHLSSRGSSPPEaageatpetTPAKDSPYL--------------KQPPPLSDSHVHRAL--------------- 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 351 PASSSPpqgtldtpssSSPPQgTSDTPASSSPPQgTSETPASNSppqgtseTPGFSSPP-QVTTATLvsSSPPQVTSETP 429
Cdd:pfam04388 404 PASSQP----------SSPPR-KDGRSQSSFPPL-SKQAPTNPN-------SRGLLEPPgDKSSVTL--SELPDFIKDLA 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 430 ASSSPTQVTSETPAS-----SSPTQVTSDTPASNsppqgtsdtPGFSSPTQVTTATLVSSsppQVTSDTPASSSPPQVTS 504
Cdd:pfam04388 463 LSSEDSVEGAEEEAAisqelSEITTEKNETDCSR---------GGLDMPFSRTMESLAGS---QRSRNRIASYCSSTSQS 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 505 DTPASSSPPQVTSETPASSSPPQVTSDTSASISPP--QVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTS 582
Cdd:pfam04388 531 DSHGPATTPESKPSALAEDGLRRTKSCSFKQSFTPieQPIESSDDCPTDEQDGENGLETSILTPSPCKIPSRQKVSTQSG 610
|
...
gi 1039789998 583 DTP 585
Cdd:pfam04388 611 QPL 613
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
239-599 |
1.05e-04 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 47.76 E-value: 1.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 239 PPQGTSDTPASSSPPQvtsatsasssppqGtsdtPASSSPPQVTSATSASSSPPQGTSDtpaSSSPPQVTSATSASSSPP 318
Cdd:PTZ00449 497 APIEEEDSDKHDEPPE-------------G----PEASGLPPKAPGDKEGEEGEHEDSK---ESDEPKEGGKPGETKEGE 556
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 319 QGTSDTPASSSPPqvtsatsasssppqgtSDTPASSSPPQGTLDTPSSSSPpqgtsDTPASSSPPQGTSETPASNSP--P 396
Cdd:PTZ00449 557 VGKKPGPAKEHKP----------------SKIPTLSKKPEFPKDPKHPKDP-----EEPKKPKRPRSAQRPTRPKSPklP 615
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 397 QgTSETPGFSSPPQVTTAtlvSSSPPqvtsetpassSPTQVTSETPASSSPTQVTSDTPASNSPP----------QGTSD 466
Cdd:PTZ00449 616 E-LLDIPKSPKRPESPKS---PKRPP----------PPQRPSSPERPEGPKIIKSPKPPKSPKPPfdpkfkekfyDDYLD 681
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 467 TPGFSSPTqVTTATLVSSSPPQVTSDTPASSSPPQVTSDT--PASSSPPQVTSETPASSSPPQvtSDTSASISPPQ---- 540
Cdd:PTZ00449 682 AAAKSKET-KTTVVLDESFESILKETLPETPGTPFTTPRPlpPKLPRDEEFPFEPIGDPDAEQ--PDDIEFFTPPEeert 758
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1039789998 541 VISDTPASSSPPQVTSETPASSsptNMTSDTPASSSPTNmTSDTPASSSPTNmTSDTPA 599
Cdd:PTZ00449 759 FFHETPADTPLPDILAEEFKEE---DIHAETGEPDEAMK-RPDSPSEHEDKP-PGDHPS 812
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
482-620 |
1.07e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 47.55 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 482 VSSSPPQVTSDTPASssppQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPAS 561
Cdd:PRK07994 367 EPEVPPQSAAPAASA----QATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSE 442
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1039789998 562 SSPTNMTsdTPASSSPTNMTSDTPASSSPTNMTSDTPA----SSSPPWPVITEVTRPESTIPA 620
Cdd:PRK07994 443 PAAASRA--RPVNSALERLASVRPAPSALEKAPAKKEAyrwkATNPVEVKKEPVATPKALKKA 503
|
|
| PLN03131 |
PLN03131 |
hypothetical protein; Provisional |
353-609 |
1.07e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 178677 [Multi-domain] Cd Length: 705 Bit Score: 47.46 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 353 SSSPPQGTLDTPSSSSPPQGTSdtpaSSSPPQGTSETPA-SNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPAS 431
Cdd:PLN03131 335 AGSGSHASLDHFKAPVAPEAAA----PMAPPIDLFQLPAtSPAPPVDLFEIPPLDPAPAINAYQPPQTSLPSSIDLFGGI 410
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 432 SSPTQVTS---ETPASSSPTqvtSDTPASNSPPQGTSDTPGFS--SPTQVTTATLVSSSPPQVTSDTPASSSPP-QVTSD 505
Cdd:PLN03131 411 TQQQSINSldeKSPELSIPK---NEGWATFDGIQPIASTPGNEnlTPFSIGPSMAGSANFDQVPSLDKGMQWPPfQNSSD 487
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 506 TPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPT-NMTSDTPASSSPT------ 578
Cdd:PLN03131 488 EESASGPAPWLGDLHNVEAPDNTSAQNWNAFEFDDSVAGIPLEGIKQSSEPQTAANMPPTaDQLIGCKALEDFNkdgikr 567
|
250 260 270
....*....|....*....|....*....|....
gi 1039789998 579 ---NMTSDTPASSSPTNMTSDtPASSSPPWPVIT 609
Cdd:PLN03131 568 tapHGQGELPGLDEPSDILAE-PSYTPPAHPIME 600
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
427-588 |
1.09e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 47.28 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 427 ETPASSSPTQVTSETPASSSPTQVTS---DTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSppqvtsDTPASSSPPQVT 503
Cdd:PRK13108 280 EAPGALRGSEYVVDEALEREPAELAAaavASAASAVGPVGPGEPNQPDDVAEAVKAEVAEVT------DEVAAESVVQVA 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 504 SDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSS--PTNMT 581
Cdd:PRK13108 354 DRDGESTPAVEETSEADIEREQPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPakPDELA 433
|
....*..
gi 1039789998 582 SDTPASS 588
Cdd:PRK13108 434 VAGPGDD 440
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
427-578 |
1.11e-04 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 46.87 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 427 ETPASSSPTQVTSETPASSSPTQVTSdtpASNSPPQGTSDTPGFSS--PTQVTTATLVSSSPPQVTSDTPA-SSSPPQVT 503
Cdd:PTZ00436 191 EDAAAAAAAKQKAAAKKAAAPSGKKS---AKAAAPAKAAAAPAKAAapPAKAAAAPAKAAAAPAKAAAPPAkAAAPPAKA 267
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1039789998 504 SDTPA-SSSPPQVTSETP--ASSSPPQVTSDTSASISPPQVISDTPA-SSSPPQVTSETPASSSPTNMTSDTPASSSPT 578
Cdd:PTZ00436 268 AAPPAkAAAPPAKAAAPPakAAAPPAKAAAAPAKAAAAPAKAAAAPAkAAAPPAKAAAPPAKAATPPAKAAAPPAKAAA 346
|
|
| PPE |
COG5651 |
PPE-repeat protein [Function unknown]; |
322-539 |
1.13e-04 |
|
PPE-repeat protein [Function unknown];
Pssm-ID: 444372 [Multi-domain] Cd Length: 385 Bit Score: 46.81 E-value: 1.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 322 SDTPASSSPPQVTSATSASSSPPQGTSDTPAS--------SSPPQGTLDTPSSSSPPQGTsdtpASSSPPQGTSETPASN 393
Cdd:COG5651 163 ALTPFTQPPPTITNPGGLLGAQNAGSGNTSSNpgfanlglTGLNQVGIGGLNSGSGPIGL----NSGPGNTGFAGTGAAA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 394 SPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSP 473
Cdd:COG5651 239 GAAAAAAAAAAAAGAGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAGGGAGAAAATGLGLGAGGAAGA 318
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039789998 474 TQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPP 539
Cdd:COG5651 319 AGATGAGAALGAGAAAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGGGSAGAAAGAASGGGAA 384
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
522-603 |
1.27e-04 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 46.56 E-value: 1.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 522 SSSPPQVTSDTSASISPPQVISDTPASSSP--PQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPA 599
Cdd:PRK10856 168 TTTDPATTPAPAAPVDTTPTNSQTPAVATApaPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAGVSTP 247
|
....
gi 1039789998 600 SSSP 603
Cdd:PRK10856 248 AADP 251
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
460-636 |
1.29e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 460 PPQGTSDTPGFSSPTQVTTAtlVSSSPPQVTSDTPASSSPPQvtsdTPASSSPPQVTSETPASSSPPQVTSDTSASISPP 539
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGA--VPAPGARAAAAVGASAVPAV----TAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPP 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 540 Q---VISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTnmTSDTPASSSPTNMTSDtPASSSPPWPVITEVTRPES 616
Cdd:PRK07003 434 AtadRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSG--SASAPASDAPPDAAFE-PAPRAAAPSAATPAAVPDA 510
|
170 180
....*....|....*....|
gi 1039789998 617 TIPAGRSLANITSKAQEDSP 636
Cdd:PRK07003 511 RAPAAASREDAPAAAAPPAP 530
|
|
| PPE |
COG5651 |
PPE-repeat protein [Function unknown]; |
267-500 |
1.29e-04 |
|
PPE-repeat protein [Function unknown];
Pssm-ID: 444372 [Multi-domain] Cd Length: 385 Bit Score: 46.81 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 267 QGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPqvtsATSASSSPPQG 346
Cdd:COG5651 155 AAASAAAVALTPFTQPPPTITNPGGLLGAQNAGSGNTSSNPGFANLGLTGLNQVGIGGLNSGSGP----IGLNSGPGNTG 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 347 TSDTPASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTS 426
Cdd:COG5651 231 FAGTGAAAGAAAAAAAAAAAAGAGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAGGGAGAAAATGLGL 310
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1039789998 427 ETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPP 500
Cdd:COG5651 311 GAGGAAGAAGATGAGAALGAGAAAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGGGSAGAAAGAASGGGAA 384
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
468-591 |
1.32e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.02 E-value: 1.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 468 PGFSSPTQVT--TATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTsdtsASISPPQVISDT 545
Cdd:PRK14951 366 PAAAAEAAAPaeKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAP----AAAAPAAAPAAA 441
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1039789998 546 PASSSPPQVTSETPAS--SSPTNMTSDTPASSSPTNMTSDTPASSSPT 591
Cdd:PRK14951 442 PAAVALAPAPPAQAAPetVAIPVRVAPEPAVASAAPAPAAAPAAARLT 489
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
362-476 |
1.32e-04 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 46.56 E-value: 1.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 362 DTPSSSSPPQGTSDTP--ASSSPPQGTSETPASNSPPQGTSetpgfSSPPQVTTATlvsssPPQVTSETPASSSPTQVTS 439
Cdd:PRK10856 148 DQSSAELSQNSGQSVPldTSTTTDPATTPAPAAPVDTTPTN-----SQTPAVATAP-----APAVDPQQNAVVAPSQANV 217
|
90 100 110
....*....|....*....|....*....|....*..
gi 1039789998 440 ETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQV 476
Cdd:PRK10856 218 DTAATPAPAAPATPDGAAPLPTDQAGVSTPAADPNAL 254
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
513-714 |
1.33e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 47.08 E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 513 PQVTSETPASSSPPQVTSD-TSASISPPQVISDTPASSSPPQvTSETPASSSPTNMTsdTPASSSPTNMTSdtPASSSPT 591
Cdd:PRK14971 363 TQKGDDASGGRGPKQHIKPvFTQPAAAPQPSAAAAASPSPSQ-SSAAAQPSAPQSAT--QPAGTPPTVSVD--PPAAVPV 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 592 NMTSDTPASSSPPwpviteVTRPESTIPagrslaniTSKAqedSPLGVISTHPQmsfQSSTSQQALDETAgerVPTIPDF 671
Cdd:PRK14971 438 NPPSTAPQAVRPA------QFKEEKKIP--------VSKV---SSLGPSTLRPI---QEKAEQATGNIKE---APTGTQK 494
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1039789998 672 QAHSEFQkacaiLQRL-RDFLPTSPtSAQVSVANLLIDLSEQLL 714
Cdd:PRK14971 495 EIFTEED-----LQYYwQEFAGTRP-QEEKALKETMINCRPKLL 532
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
295-461 |
1.38e-04 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 45.67 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 295 TSDTPASSSppqvtsatsassspPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQGTLDTPSSSSppqGTS 374
Cdd:PHA03255 25 TSSGSSTAS--------------AGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTVTST---GTT 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 375 DTPASSSpPQGTSETPASNSPPQGTSET-PGFSSPPQVTtatlvSSSPPQVTSETPASSSPTQVTSETPASSS-----PT 448
Cdd:PHA03255 88 VTPVPTT-SNASTINVTTKVTAQNITATeAGTGTSTGVT-----SNVTTRSSSTTSATTRITNATTLAPTLSSkgtsnAT 161
|
170
....*....|...
gi 1039789998 449 QVTSDTPasnSPP 461
Cdd:PHA03255 162 KTTAELP---TVP 171
|
|
| PLAT_RAB6IP1 |
cd01757 |
PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains ... |
1210-1262 |
1.40e-04 |
|
PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.
Pssm-ID: 238855 Cd Length: 114 Bit Score: 43.30 E-value: 1.40e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 1210 LGDLHGLRLWHDNSGDSPSWYVSQVIVSDMTTRKKWHFQCNCWL-------AVDLGNCER 1262
Cdd:cd01757 52 LGKLTTVQIGHDNSGLLAKWLVEYVMVRNEITGHTYKFPCGRWLgegvddgNGEDGSLER 111
|
|
| PLAT_LOX |
cd01753 |
PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they ... |
1152-1253 |
1.45e-04 |
|
PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.
Pssm-ID: 238851 Cd Length: 113 Bit Score: 43.07 E-value: 1.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 1152 YLIQVYTGYRRRAATTAKVVITLYGSEGHSEPhHLCDPEKTVFERGALDVFLLSTGSWLGDLHGLRLWHDNSGDSPSWYV 1231
Cdd:cd01753 3 YKVTVATGSSLFAGTDDYIYLTLVGTAGESEK-QLLDRPGYDFERGAVDEYKVKVPEDLGELLLVRLRKRKYLLFDAWFC 81
|
90 100
....*....|....*....|..
gi 1039789998 1232 SQVIVSDmTTRKKWHFQCNCWL 1253
Cdd:cd01753 82 NYITVTG-PGGDEYHFPCYRWI 102
|
|
| PRK12495 |
PRK12495 |
hypothetical protein; Provisional |
447-565 |
1.50e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 183558 [Multi-domain] Cd Length: 226 Bit Score: 45.63 E-value: 1.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 447 PT---QVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQV-TSDTPASSSPPQVTSETPAS 522
Cdd:PRK12495 62 PTcqqPVTEDGAAGDDAGDGAEATAPSDAGSQASPDDDAQPAAEAEAADQSAPPEASSTsATDEAATDPPATAAARDGPT 141
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1039789998 523 SSPPQVTSDTSASISPPQvisDTPASSSPPQvTSETPASSSPT 565
Cdd:PRK12495 142 PDPTAQPATPDERRSPRQ---RPPVSGEPPT-PSTPDAHVAGT 180
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
430-603 |
1.52e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 47.30 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 430 ASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPgfssptQVTTAtlVSSSPPQVT-SDTPasSSPPQVTSDTPA 508
Cdd:TIGR00927 55 SSQQPIKLASRDLSNDEMMMVSSDPPKSSSEMEGEMLAP------QATVG--RDEATPSIAmENTP--SPPRRTAKITPT 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 509 SSSppqvTSETPASSSPPQVTSDTSAsiSPPQVISDTPASSSPPQVTSETPA------SSSPTNMTSDTPA-SSSPTNMT 581
Cdd:TIGR00927 125 TPK----NNYSPTAAGTERVKEDTPA--TPSRALNHYISTSGRQRVKSYTPKprgevkSSSPTQTREKVRKyTPSPLGRM 198
|
170 180
....*....|....*....|..
gi 1039789998 582 SDTPASSspTNMTSDTPASSSP 603
Cdd:TIGR00927 199 VNSYAPS--TFMTMPRSHGITP 218
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
375-554 |
1.54e-04 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 46.48 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 375 DTPASSSPPQGTSETPASnsPPQGTSETPGfSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTqvtsdT 454
Cdd:PTZ00436 192 DAAAAAAAKQKAAAKKAA--APSGKKSAKA-AAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAA-----P 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 455 PASNSPPQGTSDTPgfssPTQVTTATLVSSSPPQVTSDTPA-SSSPPQVTSDTPA-SSSPPQVTSETPASSSppqvtsdt 532
Cdd:PTZ00436 264 PAKAAAPPAKAAAP----PAKAAAPPAKAAAPPAKAAAAPAkAAAAPAKAAAAPAkAAAPPAKAAAPPAKAA-------- 331
|
170 180
....*....|....*....|..
gi 1039789998 533 sasiSPPQVISDTPASSSPPQV 554
Cdd:PTZ00436 332 ----TPPAKAAAPPAKAAAAPV 349
|
|
| PRK11901 |
PRK11901 |
hypothetical protein; Reviewed |
345-530 |
1.55e-04 |
|
hypothetical protein; Reviewed
Pssm-ID: 237015 [Multi-domain] Cd Length: 327 Bit Score: 46.21 E-value: 1.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 345 QGTSDTPASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQgtsetPASNSPPQGTS--ETPGFssppqvttatlVSSSPP 422
Cdd:PRK11901 91 NQSSPSAANNTSDGHDASGVKNTAPPQDISAPPISPTPTQ-----AAPPQTPNGQQriELPGN-----------ISDALS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 423 QVTSETPASSSPTQvtseTPASSSPTqvtsdTPASNSPPQGTSdtPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQV 502
Cdd:PRK11901 155 QQQGQVNAASQNAQ----GNTSTLPT-----APATVAPSKGAK--VPATAETHPTPPQKPATKKPAVNHHKTATVAVPPA 223
|
170 180
....*....|....*....|....*....
gi 1039789998 503 TSDTPASSSPPQ-VTSETPASSSPPQVTS 530
Cdd:PRK11901 224 TSGKPKSGAASArALSSAPASHYTLQLSS 252
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
208-572 |
1.56e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 46.91 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 208 SSAPPKATHRMTITSLTGRPQVTSDtlaSSSPPQGTSDTPassSPPQVTSATSASSSPpqgTSDTPASSSPPQVtsatsa 287
Cdd:TIGR00927 76 SSDPPKSSSEMEGEMLAPQATVGRD---EATPSIAMENTP---SPPRRTAKITPTTPK---NNYSPTAAGTERV------ 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 288 sssppqgTSDTPASssPPQVTSATSASSSPPQGTSDTPA------SSSPPQVTSatsasssppQGTSDTPASSSPPQGTL 361
Cdd:TIGR00927 141 -------KEDTPAT--PSRALNHYISTSGRQRVKSYTPKprgevkSSSPTQTRE---------KVRKYTPSPLGRMVNSY 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 362 DTPSSSSPPQGTSDTPASSsppQGTSETPASNS--PPQGTSETPGFSSPpqVTTATLVSSSPPQVTS--ETPASSSPTQV 437
Cdd:TIGR00927 203 APSTFMTMPRSHGITPRTT---VKDSEITATYKmlETNPSKRTAGKTTP--TPLKGMTDNTPTFLTRevETDLLTSPRSV 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 438 TsETPASSSPTQVTSDTPAS-------NSP--PQGT--SDTPGfSSPTQVTTATLVSSSPPQVTSDTPA-SSSPPQVTSD 505
Cdd:TIGR00927 278 V-EKNTLTTPRRVESNSSTNhwglvgkNNLttPQGTvlEHTPA-TSEGQVTISIMTGSSPAETKASTAAwKIRNPLSRTS 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 506 TPA-------------SSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPaSSSPTNMTSDTP 572
Cdd:TIGR00927 356 APAvriasatfrglekNPSTAPSTPATPRVRAVLTTQVHHCVVVKPAPAVPTTPSPSLTTALFPEAP-SPSPSALPPGQP 434
|
|
| KLF12_N |
cd21441 |
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as ... |
542-603 |
1.78e-04 |
|
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as Krueppel-like transcription factor 12, KLF12) regulates, by transcriptionally repressing Nur77 expression, endometrial decidualization, which is a prerequisite for successful implantation and the establishment of pregnancy. It is involved in the maturation processes of kidney collecting ducts after birth, and is able to increase the promoter activity of the UT-A1 urea transporter promoter by binding to the CACCC motif. KLF12 has also been found to promote colorectal cancer growth is also involved in the invasion and apoptosis of basal-like breast carcinoma. KLF12 belongs to a family of proteins called the Specificity Protein (SP)/KLF family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. Although these factors bind to similar elements in vitro, they have distinct activities in vivo depending on their expression profile and the sequence of the N-terminal activation/repression domain, which differ between members. KLF12 contains an N-terminal domain that is related to the N-terminal repression domain of KLF8.
Pssm-ID: 410608 [Multi-domain] Cd Length: 197 Bit Score: 45.00 E-value: 1.78e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039789998 542 ISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSP 603
Cdd:cd21441 65 TSPTAVSSSPVSMTASASPSSSSSSSSSSSRPASSPTVITSVSSASSVPTVLTPGPLVASAS 126
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
483-564 |
1.84e-04 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 46.17 E-value: 1.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 483 SSSPPQVTSDTPASSSPPQVTSDTPASSSP--PQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPA 560
Cdd:PRK10856 168 TTTDPATTPAPAAPVDTTPTNSQTPAVATApaPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAGVSTP 247
|
....
gi 1039789998 561 SSSP 564
Cdd:PRK10856 248 AADP 251
|
|
| AF-4 |
pfam05110 |
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and ... |
178-606 |
2.01e-04 |
|
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homolog Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila.
Pssm-ID: 461550 [Multi-domain] Cd Length: 514 Bit Score: 46.27 E-value: 2.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 178 IPGNGPPLAMCHQPAPPelfetlCFPIDPASSAPPKATHrmtitsltgrpqvtsdtlaSSSPPQGTsdtPASSSPPqvts 257
Cdd:pfam05110 75 IPKNSVPQTPQEKPDQP------FFPDKTSGLPPSFHTS-------------------SHSQPMGP---PSSSSPS---- 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 258 atsasSSPPQGTSDTPASSSPPQvtsatsasssPPQGTSDTPASSSPPQvtsatSASSSPPQGTSDTPASSSPPQVTSAT 337
Cdd:pfam05110 123 -----VSSSQSQKKSQARTEPAH----------GGHSSSGSQSSQRSQG-----QSRSKGGQESHSSSHHKRQERREDLF 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 338 SASSSPPQGTSDTPASSSPPQGTLDTPSSSSPPQGTSDTPASSSPpqGTSETPASNSPPQGTSETPGFSSPpqVTTATLV 417
Cdd:pfam05110 183 SCASLSHSLEELSPLLSSLSSPVKPLSPSHSRQHTGSKAQNSSDH--HGKEYSHSKSPRDSEAGSHGPESP--STSLLAS 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 418 SSSPPQVTSETPASSSPTQVTSETPASSSP----TQVTSDTPASNSPPQG----------------TSDTPGFSSPTQVT 477
Cdd:pfam05110 259 SSQLSSQTFPPSLPSKTSAMQQKPTAYVRPmdgqDQAPSESPELKPSPEDyhgqsygklsdlkanaKAKLSKLKIPSQPL 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 478 TATLVS--------------SSPPQVTS-DTPASSSP---PQVTSDTPASSSPPQ------VTSETPASSSPPQVT---- 529
Cdd:pfam05110 339 EQSLSNdvhcveeilkemthSWPPPLTAiHTPSTAEPskfPFPTKESQHVTSGYQnqkqydAPSKTLPTSQQGTSMledd 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 530 ---------SDTSASISPPQviSDTPASSSPPQVTSETPASSSPTNMTSdtpASSSPTNMTSDTPASSSPTNMTSDTPAS 600
Cdd:pfam05110 419 lklsssedsDDDQAPEKPPP--SSAPPSAPQSQPNSVASAHSSSGESGS---SSDSESSSESDSESESSSSDSEANEPPR 493
|
....*.
gi 1039789998 601 SSPPWP 606
Cdd:pfam05110 494 SATPEP 499
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
321-497 |
2.02e-04 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 45.28 E-value: 2.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 321 TSDTPASSSPPQVTSATSASSSPPQGtSDTPASSSPPQGTLDTPSSSSPPQGTSDTPASSSppqGTSETPASnsppqgts 400
Cdd:PHA03255 25 TSSGSSTASAGNVTGTTAVTTPSPSA-SGPSTNQSTTLTTTSAPITTTAILSTNTTTVTST---GTTVTPVP-------- 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 401 eTPGFSSPPQVTTatlvsssppQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTAT 480
Cdd:PHA03255 93 -TTSNASTINVTT---------KVTAQNITATEAGTGTSTGVTSNVTTRSSSTTSATTRITNATTLAPTLSSKGTSNATK 162
|
170
....*....|....*..
gi 1039789998 481 LVSSSPPQVTSDTPASS 497
Cdd:PHA03255 163 TTAELPTVPDERQPSLS 179
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
147-433 |
2.30e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 46.68 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 147 PPQGASIWRNEF-GPGPLLPmkRRGAETERHMIPGNGPPLAMCHQPAPPElfETlcfPIDPASSAPPKATHRMTiTSLTG 225
Cdd:pfam03154 294 PPQPFPLTPQSSqSQVPPGP--SPAAPGQSQQRIHTPPSQSQLQSQQPPR--EQ---PLPPAPLSMPHIKPPPT-TPIPQ 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 226 RPQVTSDT----LASSSPPQGTSDTPAsssPPQVTSATSAsssppqgTSDTPASSSPPQVTSATsasssppQGTSDTPAS 301
Cdd:pfam03154 366 LPNPQSHKhpphLSGPSPFQMNSNLPP---PPALKPLSSL-------STHHPPSAHPPPLQLMP-------QSQQLPPPP 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 302 SSPPQVTsatsasssppQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQGTLDTPSSSSPPQGTSDTPASSS 381
Cdd:pfam03154 429 AQPPVLT----------QSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTSTSSAMPGIQPPSSA 498
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1039789998 382 PPQGTSETPASNS---PP-QGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSS 433
Cdd:pfam03154 499 SVSSSGPVPAAVScplPPvQIKEEALDEAEEPESPPPPPRSPSPEPTVVNTPSHAS 554
|
|
| motB |
PRK12799 |
flagellar motor protein MotB; Reviewed |
425-556 |
2.41e-04 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 45.86 E-value: 2.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 425 TSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDtpgfSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVts 504
Cdd:PRK12799 296 HGTVPVAAVTPSSAVTQSSAITPSSAAIPSPAVIPSSVTTQS----ATTTQASAVALSSAGVLPSDVTLPGTVALPAA-- 369
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1039789998 505 dTPASSSPPQVTSETPASSSPPQVTSDTSasiSPPQVISDTPASSSPPQVTS 556
Cdd:PRK12799 370 -EPVNMQPQPMSTTETQQSSTGNITSTAN---GPTTSLPAAPASNIPVSPTS 417
|
|
| PRK14959 |
PRK14959 |
DNA polymerase III subunits gamma and tau; Provisional |
364-499 |
2.47e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 46.21 E-value: 2.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 364 PSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPqvTSETPASSSPTQVTSETPa 443
Cdd:PRK14959 367 PVESLRPSGGGASAPSGSAAEGPASGGAATIPTPGTQGPQGTAPAAGMTPSSAAPATPA--PSAAPSPRVPWDDAPPAP- 443
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1039789998 444 sssptqvtsdtPASNSPPQGTSDTPGFSSPT--QVTTATLVSSSPPQVTSDTPASSSP 499
Cdd:PRK14959 444 -----------PRSGIPPRPAPRMPEASPVPgaPDSVASASDAPPTLGDPSDTAEHTP 490
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
429-561 |
2.49e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 46.25 E-value: 2.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 429 PASSSPTQVTSEtpaSSSPTQVTSDTPASNSPPQgtsdtpgfSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPA 508
Cdd:PRK14951 366 PAAAAEAAAPAE---KKTPARPEAAAPAAAPVAQ--------AAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAP 434
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1039789998 509 SSSPPQVTSETPASSSPPQVTSDTSASI-----SPPQVISDTPASSSPPQVTSETPAS 561
Cdd:PRK14951 435 AAAPAAAPAAVALAPAPPAQAAPETVAIpvrvaPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PHA03193 |
PHA03193 |
tegument protein VP11/12; Provisional |
375-511 |
2.57e-04 |
|
tegument protein VP11/12; Provisional
Pssm-ID: 177555 Cd Length: 594 Bit Score: 46.25 E-value: 2.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 375 DTPASSS---PPQG--TSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPAS------SSPTQVTSETPA 443
Cdd:PHA03193 440 DSPFQRKramPEDGgeIHEALANNGQAIFPECFSGDLPPIAQALLSADELPNDTTASTSNEMkgdaecPAAQDAAAILPA 519
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1039789998 444 SSsptQVTSDTPASNSPPQGTSDTpgfSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSS 511
Cdd:PHA03193 520 SF---QIENGGAADGSGLAIPAAM---CDATAVESPSTVAETPPERLLAAESGPRCKATAKHKGGSSK 581
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
350-435 |
2.78e-04 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 45.72 E-value: 2.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 350 TPASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASnspPQGTSETPGFSSPPqvttatlvsssPPQVTSETP 429
Cdd:PHA03291 204 VPATPRPTPRTTASPETTPTPSTTTSPPSTTIPAPSTTIAAPQ---AGTTPEAEGTPAPP-----------TPGGGEAPP 269
|
....*.
gi 1039789998 430 ASSSPT 435
Cdd:PHA03291 270 ANATPA 275
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
487-594 |
2.88e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 45.92 E-value: 2.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 487 PQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVisdTPASSSPPQVtSETPASSSPTN 566
Cdd:PRK14971 363 TQKGDDASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSA---TQPAGTPPTV-SVDPPAAVPVN 438
|
90 100
....*....|....*....|....*...
gi 1039789998 567 MTSDTPASSSPTNMTSDTPASSSPTNMT 594
Cdd:PRK14971 439 PPSTAPQAVRPAQFKEEKKIPVSKVSSL 466
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
431-525 |
2.91e-04 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 45.40 E-value: 2.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 431 SSSPTQVTSETPASSSPTQVTSDTPASNSPPQGtsdtpgfSSPTQVTTATlvssSPPQVTSDTPASSSPPQVTSDTPASS 510
Cdd:PRK10856 168 TTTDPATTPAPAAPVDTTPTNSQTPAVATAPAP-------AVDPQQNAVV----APSQANVDTAATPAPAAPATPDGAAP 236
|
90
....*....|....*
gi 1039789998 511 SPPQVTSETPASSSP 525
Cdd:PRK10856 237 LPTDQAGVSTPAADP 251
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
435-572 |
3.03e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 45.92 E-value: 3.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 435 TQVTSETPASSSPTQVTSDT---PASNSPPQGTSDtpgfssPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSS 511
Cdd:PRK14971 363 TQKGDDASGGRGPKQHIKPVftqPAAAPQPSAAAA------ASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVP 436
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1039789998 512 PPqvtsetPASSSPPQVTSDTSAS---ISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTP 572
Cdd:PRK14971 437 VN------PPSTAPQAVRPAQFKEekkIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQK 494
|
|
| PRK11907 |
PRK11907 |
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; |
366-456 |
3.21e-04 |
|
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 46.00 E-value: 3.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 366 SSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSET-PGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPAS 444
Cdd:PRK11907 19 TASNPKLAQAEEIVTTTPATSTEAEQTTPVESDATEEaDNTETPVAATTAAEAPSSSETAETSDPTSEATDTTTSEARTV 98
|
90
....*....|..
gi 1039789998 445 SSPTqvTSDTPA 456
Cdd:PRK11907 99 TPAA--TETSKP 108
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
377-513 |
3.33e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.86 E-value: 3.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 377 PASSSPPQGTSETPASNSPPQGTsetPGFSSPPQVTTATLVSSSPPQVTSET---PASSSPTQVTSETPASSSPTQVTSD 453
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAA---PAAAPVAQAAAAPAPAAAPAAAASAPaapPAAAPPAPVAAPAAAAPAAAPAAAP 442
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 454 TPASNSPPQGTSDTPGFSSPtqvttatlvsssPPQVTSDTPASSSPPQVTSDTPASSSPP 513
Cdd:PRK14951 443 AAVALAPAPPAQAAPETVAI------------PVRVAPEPAVASAAPAPAAAPAAARLTP 490
|
|
| motB |
PRK12799 |
flagellar motor protein MotB; Reviewed |
399-530 |
3.52e-04 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 45.48 E-value: 3.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 399 TSETPGFSSPPqvTTATLVSSSPPQVTSETPASS---SPTQVTSETPASSSPTQVTSDTPASnsppqgtSDTPGFSSPTQ 475
Cdd:PRK12799 296 HGTVPVAAVTP--SSAVTQSSAITPSSAAIPSPAvipSSVTTQSATTTQASAVALSSAGVLP-------SDVTLPGTVAL 366
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1039789998 476 VTTATLVSSSPPQVTSDTPASSSppqvTSDTPASSSPPQVTSETPASSSPPQVTS 530
Cdd:PRK12799 367 PAAEPVNMQPQPMSTTETQQSST----GNITSTANGPTTSLPAAPASNIPVSPTS 417
|
|
| PHA03132 |
PHA03132 |
thymidine kinase; Provisional |
354-473 |
4.02e-04 |
|
thymidine kinase; Provisional
Pssm-ID: 222997 [Multi-domain] Cd Length: 580 Bit Score: 45.52 E-value: 4.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 354 SSPPQGTLDTPSSSSPPQGTSDTPasSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSS 433
Cdd:PHA03132 65 GVATSTIYTVPRPPRGPEQTLDKP--DSLPASRELPPGPTPVPPGGFRGASSPRLGADSTSPRFLYQVNFPVILAPIGES 142
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1039789998 434 PTqvTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSP 473
Cdd:PHA03132 143 NS--SSEELSEEEEHSRPPPSESLKVKNGGKVYPKGFSKH 180
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
455-573 |
4.13e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.63 E-value: 4.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 455 PASNSPPQGTSDTPGfsspTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSdtSA 534
Cdd:PRK07994 366 PEPEVPPQSAAPAAS----AQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK--AK 439
|
90 100 110
....*....|....*....|....*....|....*....
gi 1039789998 535 SISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPA 573
Cdd:PRK07994 440 KSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEA 478
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
460-577 |
4.59e-04 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 44.95 E-value: 4.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 460 PPQGT-SDTPGFSSPTQvttatlvSSSPPQVTSDTPaSSSPPQVTsdTPASSSPPQVTSETPASSSPPQVTSDTSASISP 538
Cdd:PHA03291 167 PAEGTlAAPPLGEGSAD-------GSCDPALPLSAP-RLGPADVF--VPATPRPTPRTTASPETTPTPSTTTSPPSTTIP 236
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1039789998 539 PQVISDTPASSSPPQVTSETPASSSP-TNMTSDTPASSSP 577
Cdd:PHA03291 237 APSTTIAAPQAGTTPEAEGTPAPPTPgGGEAPPANATPAP 276
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
442-578 |
4.84e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.09 E-value: 4.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 442 PASSSPTQVTSDTPASNSPPQGTsdtPGFSSPTQVTTATLVSSSPPQVTSdtpASSSPPqvtsdTPASSSPPQVTSETPA 521
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAA---PAAAPVAQAAAAPAPAAAPAAAAS---APAAPP-----AAAPPAPVAAPAAAAP 434
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1039789998 522 SSSPPQVTSdtSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPT 578
Cdd:PRK14951 435 AAAPAAAPA--AVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLT 489
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
204-410 |
4.86e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.36 E-value: 4.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 204 IDPASSAPPKATHRMTITSLTGRPQVTSDTLASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQvts 283
Cdd:PRK07764 588 VGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASD--- 664
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 284 atSASSSPPQGTSDTPASSSPPQVtsatsasssppQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQGTLDT 363
Cdd:PRK07764 665 --GGDGWPAKAGGAAPAAPPPAPA-----------PAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAP 731
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1039789998 364 PSSSS---PPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQ 410
Cdd:PRK07764 732 SPAADdpvPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSE 781
|
|
| PRK11907 |
PRK11907 |
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; |
378-468 |
4.94e-04 |
|
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 45.23 E-value: 4.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 378 ASSSPPQGTSETPASNSPPQGTSETPgfSSPPQVTTAT---LVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDT 454
Cdd:PRK11907 18 LTASNPKLAQAEEIVTTTPATSTEAE--QTTPVESDATeeaDNTETPVAATTAAEAPSSSETAETSDPTSEATDTTTSEA 95
|
90
....*....|....
gi 1039789998 455 PAsnSPPQGTSDTP 468
Cdd:PRK11907 96 RT--VTPAATETSK 107
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
428-518 |
4.98e-04 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 44.62 E-value: 4.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 428 TPASSSPTQVTSETPASSSPTQVTSDTPASNSPpqgtsdtpgfSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTP 507
Cdd:PRK13042 18 TGVITTTTQAANATTPSSTKVEAPQSTPPSTKV----------EAPQSKPNATTPPSTKVEAPQQTPNATTPSSTKVETP 87
|
90
....*....|.
gi 1039789998 508 ASSSPPQVTSE 518
Cdd:PRK13042 88 QSPTTKQVPTE 98
|
|
| CytochromB561_N |
pfam09786 |
Cytochrome B561, N terminal; Members of this family are found in the N terminal region of ... |
350-558 |
5.04e-04 |
|
Cytochrome B561, N terminal; Members of this family are found in the N terminal region of cytochrome B561, as well as in various other putative uncharacterized proteins.
Pssm-ID: 462899 Cd Length: 579 Bit Score: 45.20 E-value: 5.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 350 TPASSSPPQGTLDTPSssspPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFS--SPPQVTTATLVSSSPPQVTSE 427
Cdd:pfam09786 129 PPKSKSSPQSPSPVLV----PLHQSVSPSSSESRKGGDKSPAGSGKKLRSFSTSSKSpaSPSVYLRGSPVPLNSSPLPSD 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 428 TPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSpPQVTSDTP 507
Cdd:pfam09786 205 RNYENSVQSSPEIDSAVSTPWSRKRATIGKEIRTEKMLERFLAEVDEKITESAFGKASPSNVSGSANRSGS-TRSTPLRS 283
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1039789998 508 ASSSPPQVTSETPASSSPpqvtSDTSASISPPQVISDTPASSSPPQVTSET 558
Cdd:pfam09786 284 VRMSPGSQKFTTPPKKGE----GDLPSPMSMEENIEAFENLGIYPQIEQWR 330
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
390-530 |
5.28e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.24 E-value: 5.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 390 PASNSPPQGTSetpgfSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPG 469
Cdd:PRK07994 366 PEPEVPPQSAA-----PAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKK 440
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1039789998 470 fSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASS--SPPQVTSETPASSSPPQVTS 530
Cdd:PRK07994 441 -SEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRwkATNPVEVKKEPVATPKALKK 502
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
354-502 |
5.43e-04 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 44.56 E-value: 5.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 354 SSPPQGTlDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPgfssPPQVTTATLVSSSPPQVTSETPASSS 433
Cdd:PTZ00436 208 AAAPSGK-KSAKAAAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAP----PAKAAAPPAKAAAPPAKAAAPPAKAA 282
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1039789998 434 ptqvTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSS--PTQVTTATLVSSSPPQVTSDTPASSSPPQV 502
Cdd:PTZ00436 283 ----APPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAapPAKAAAPPAKAATPPAKAAAPPAKAAAAPV 349
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
357-501 |
5.49e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 45.15 E-value: 5.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 357 PQGTLDTPSSSSPPQGTSDT---PASSSPPQgtseTPASNSPPQGTSETPgfSSPPQVTTATLVSSSPPQVtSETPASSS 433
Cdd:PRK14971 363 TQKGDDASGGRGPKQHIKPVftqPAAAPQPS----AAAAASPSPSQSSAA--AQPSAPQSATQPAGTPPTV-SVDPPAAV 435
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1039789998 434 PTQVTSETPASSSPTQVTSDTPasNSPPQGTSDTPGFSSPTQVTTAtlvsssppQVTSDTPASSSPPQ 501
Cdd:PRK14971 436 PVNPPSTAPQAVRPAQFKEEKK--IPVSKVSSLGPSTLRPIQEKAE--------QATGNIKEAPTGTQ 493
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
396-540 |
5.58e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 45.15 E-value: 5.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 396 PQGTSETPGFSSPPQVTT-ATLVSSSPPQVTSETPASSSPTQvTSETPASSSPTQVtsdTPASNSPPQGTSDTPgfsSPT 474
Cdd:PRK14971 363 TQKGDDASGGRGPKQHIKpVFTQPAAAPQPSAAAAASPSPSQ-SSAAAQPSAPQSA---TQPAGTPPTVSVDPP---AAV 435
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039789998 475 QVTTAtlvSSSPPQVtsdTPASSSPPQVTSDTPASSSPPQVTSetPASSSPPQVTSDTSASISPPQ 540
Cdd:PRK14971 436 PVNPP---STAPQAV---RPAQFKEEKKIPVSKVSSLGPSTLR--PIQEKAEQATGNIKEAPTGTQ 493
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
269-454 |
6.07e-04 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 43.74 E-value: 6.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 269 TSDTPASSSppqvtsatsassspPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSppqVTSATSASSSPPQGTS 348
Cdd:PHA03255 25 TSSGSSTAS--------------AGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAPITTT---AILSTNTTTVTSTGTT 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 349 DTPASSSPPQGTLDTPSSSsppqgTSDTPASSSPPQGTSETPASNSPPQGTSETpgfSSPPQVTTATLVSSSPPQVTset 428
Cdd:PHA03255 88 VTPVPTTSNASTINVTTKV-----TAQNITATEAGTGTSTGVTSNVTTRSSSTT---SATTRITNATTLAPTLSSKG--- 156
|
170 180
....*....|....*....|....*.
gi 1039789998 429 paSSSPTQVTSETPASSSPTQVTSDT 454
Cdd:PHA03255 157 --TSNATKTTAELPTVPDERQPSLSY 180
|
|
| PPE |
COG5651 |
PPE-repeat protein [Function unknown]; |
295-526 |
6.67e-04 |
|
PPE-repeat protein [Function unknown];
Pssm-ID: 444372 [Multi-domain] Cd Length: 385 Bit Score: 44.50 E-value: 6.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 295 TSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSppqvtSATSASSSPPQGTSDTPASSSPPQGTldtpSSSSPPQGTS 374
Cdd:COG5651 162 VALTPFTQPPPTITNPGGLLGAQNAGSGNTSSNPG-----FANLGLTGLNQVGIGGLNSGSGPIGL----NSGPGNTGFA 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 375 DTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDT 454
Cdd:COG5651 233 GTGAAAGAAAAAAAAAAAAGAGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAGGGAGAAAATGLGLGA 312
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039789998 455 PASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSdTPASSSPPQVTSDTPASSSPPQVTSETPASSSPP 526
Cdd:COG5651 313 GGAAGAAGATGAGAALGAGAAAAAAGAAAGAGAAAAA-AAGGAGGGGGGALGAGGGGGSAGAAAGAASGGGA 383
|
|
| PRK14959 |
PRK14959 |
DNA polymerase III subunits gamma and tau; Provisional |
346-460 |
6.68e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 44.67 E-value: 6.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 346 GTSDTPASSSPPQGTLDTPSSSSPpQGTSdtPASS-SPPQGTSETPASNSPPqgTSETPGFSSPPQVTTATLVSSSPPQV 424
Cdd:PRK14959 382 SGSAAEGPASGGAATIPTPGTQGP-QGTA--PAAGmTPSSAAPATPAPSAAP--SPRVPWDDAPPAPPRSGIPPRPAPRM 456
|
90 100 110
....*....|....*....|....*....|....*.
gi 1039789998 425 TSETPASSSPTQVTSEtpASSSPTQVTSDTPASNSP 460
Cdd:PRK14959 457 PEASPVPGAPDSVASA--SDAPPTLGDPSDTAEHTP 490
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
460-647 |
7.11e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.87 E-value: 7.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 460 PPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASI--- 536
Cdd:PRK12323 365 PGQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASArgp 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 537 ----SPPQVISDTPASSSPPQVTS-ETPASSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSPPWP--VIT 609
Cdd:PRK12323 445 ggapAPAPAPAAAPAAAARPAAAGpRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAgwVAE 524
|
170 180 190
....*....|....*....|....*....|....*...
gi 1039789998 610 EVTRPESTIPAGRSLANITSKAQEDSPLGVISTHPQMS 647
Cdd:PRK12323 525 SIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVA 562
|
|
| ARG80 |
COG5068 |
Regulator of arginine metabolism and related MADS box-containing transcription factors ... |
443-713 |
7.14e-04 |
|
Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription];
Pssm-ID: 227400 [Multi-domain] Cd Length: 412 Bit Score: 44.24 E-value: 7.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 443 ASSSPTQVTSdTPASNSPPQGTSDTPGF-SSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQvtsetpa 521
Cdd:COG5068 116 SVLTGTEVLL-LVISENGLVHTFTTPKLeSVVKSLEGKSLIQSPCSNAPSDSSEEPSSSASFSVDPNDNNPMG------- 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 522 ssSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTN------MTSDTPASSSPTNMTSDTPASSSPTNMTS 595
Cdd:COG5068 188 --SFQHNGSPQTNFIPLQNPQTQQYQQHSSRKDHPTVPHSNTNNGrppakfMIPELHSSHSTLDLPSDFISDSGFPNQSS 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 596 dtpASSSPPWPVITEVTRPES-----TIPAGRSLANITSKAQE-----DSPLGVISTHP-------------QMSFQSST 652
Cdd:COG5068 266 ---TSIFPLDSAIIQITPPHLpnnppQENRHELYSNDSSMVSEtpppkNLPNGSPNQSPlnnlsrgnpaspnSIIRENNQ 342
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 653 SQQalDETAGERVPTIPDFQA---------HSEFQKACAILQRLRDFLPTSPTSAQVSVANLLIDLSEQL 713
Cdd:COG5068 343 VED--ESFNGRQGSAIWNALIsttqpnsglHTEASTAPSSTIPADPLKNAAQTNSGTRNNNFSDNLYGQL 410
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
383-514 |
7.59e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 44.77 E-value: 7.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 383 PQGTSETPASNSPPQGTSetPGFS---SPPQVTTATLVSSSPPQvTSETPASSSPTQVtseTPASSSPTQVTSDTP-ASN 458
Cdd:PRK14971 363 TQKGDDASGGRGPKQHIK--PVFTqpaAAPQPSAAAAASPSPSQ-SSAAAQPSAPQSA---TQPAGTPPTVSVDPPaAVP 436
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1039789998 459 SPPQGT---SDTPGFSSPTQVTTATLVSSSPPQVTSdtPASSSPPQVTSDTPASSSPPQ 514
Cdd:PRK14971 437 VNPPSTapqAVRPAQFKEEKKIPVSKVSSLGPSTLR--PIQEKAEQATGNIKEAPTGTQ 493
|
|
| Treacle |
pfam03546 |
Treacher Collins syndrome protein Treacle; |
206-449 |
8.16e-04 |
|
Treacher Collins syndrome protein Treacle;
Pssm-ID: 460967 [Multi-domain] Cd Length: 531 Bit Score: 44.29 E-value: 8.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 206 PASSAPPKATHRMTitsltgRPQvtsdtlASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSP------- 278
Cdd:pfam03546 246 PAAATPAQAKPALK------TPQ------TKASPRKGTPITPTSAKVPPVRVGTPAPWKAGTVTSPACASSPAvargaqr 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 279 PQVTSATSASSSPPQGTSDTPASSSPPQV-------TSATSASSSPPQGTSDTPASSSPP---QVTSATSASSSPPQGTS 348
Cdd:pfam03546 314 PEEDSSSSEESESEEETAPAAAVGQAKSVgkglqgkAASAPTKGPSGQGTAPVPPGKTGPavaQVKAEAQEDSESSEEES 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 349 D------TPASSSPPQGTLDTPSSSSPPQGTSDTPASSSP-------PQGTSETPASNSPPQGTSETPGFSSPPQ----- 410
Cdd:pfam03546 394 DseeaaaTPAQVKASGKTPQAKANPAPTKASSAKGAASAPgkvvaaaAQAKQGSPAKVKPPARTPQNSAISVRGQasvpa 473
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1039789998 411 ----VTTATLVSSSPPQVTSETPASSS----------PTQV-----TSETPASSSPTQ 449
Cdd:pfam03546 474 vgkaVATAAQAQKGPVGGPQEEDSESSeeesdseeeaPAQAkpsgkTPQVRAASAPAK 531
|
|
| PRK11907 |
PRK11907 |
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; |
443-552 |
8.72e-04 |
|
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 44.46 E-value: 8.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 443 ASSSPTQVTSDTPASNSPPqgtsdtpgfSSPTQVTTATLVSSSppqVTSDTPASSSPPQVTSDTPASSSPpqvtsETPAS 522
Cdd:PRK11907 18 LTASNPKLAQAEEIVTTTP---------ATSTEAEQTTPVESD---ATEEADNTETPVAATTAAEAPSSS-----ETAET 80
|
90 100 110
....*....|....*....|....*....|
gi 1039789998 523 SSPPQVTSDTSASISPPQVISDTpaSSSPP 552
Cdd:PRK11907 81 SDPTSEATDTTTSEARTVTPAAT--ETSKP 108
|
|
| NupH_GANP |
pfam16768 |
Nucleoporin homology of Germinal-centre associated nuclear protein; NupH_GANP is the ... |
371-589 |
9.09e-04 |
|
Nucleoporin homology of Germinal-centre associated nuclear protein; NupH_GANP is the nucleoporin-homology domain at the N-terminus of human GANP or germinal-centre associated nuclear proteins. GANP is part of the TREX-2 complex that links transcription with nuclear messenger RNA export, and it associates with the mRNP particle through the interaction of the NupH_GANP with NXF1, the export factor. This attachment mediates efficient delivery of mRNPs to nuclear pore complexes.
Pssm-ID: 435572 [Multi-domain] Cd Length: 292 Bit Score: 43.74 E-value: 9.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 371 QGTSDTPASSSPPQGTSETPAS---NSPP------QGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSptqVTSET 441
Cdd:pfam16768 9 QQPSAFSTSSSPSTGTFQAKPPfrfGQPSlfgqnnTLSGKNSGFSQVSSFPTTSGVSHSSSGQTLGFTQTSG---VGLFS 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 442 PASSSPTQVTSDTPASNSPPQgtsdTPGFS--SPTQV----------TTATLVSSS----------PPQVTSDTP---AS 496
Cdd:pfam16768 86 GLEHTPSFVATSGPSSSSVPS----NPGFSfkSPTNLgafpststfgPESGEVASSgfgktefsfkPPENAVFRPifgAE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 497 SSP----PQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASispPQVISDTPASSSPPQvTSETPASSSPT---NMTS 569
Cdd:pfam16768 162 SEPektqSQITSGFFTFSHPVSSGPGGLAPFSFSQVTSSSATS---SNFTFSKPVSSNNSS-SAFAPALSSQNveeEKRG 237
|
250 260
....*....|....*....|
gi 1039789998 570 DTPASSSPTNMTSDTPASSS 589
Cdd:pfam16768 238 PKSFFGSSNSSFTSFPNSSS 257
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
404-526 |
9.81e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 44.32 E-value: 9.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 404 GFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVS 483
Cdd:PRK14951 369 AAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALA 448
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1039789998 484 SSPPQVTSDTPAsSSPPQVTSDTPASSSPPQVTSETPASSSPP 526
Cdd:PRK14951 449 PAPPAQAAPETV-AIPVRVAPEPAVASAAPAPAAAPAAARLTP 490
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
375-512 |
1.03e-03 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 43.79 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 375 DTPASSSPPQGTSETPASNSPpqgtSETPGFSSPPQvttatlvSSSPPQVTSETPaSSSPTQVTseTPASSSPTQVTSDT 454
Cdd:PHA03291 152 GATNASLFPLGLAAFPAEGTL----AAPPLGEGSAD-------GSCDPALPLSAP-RLGPADVF--VPATPRPTPRTTAS 217
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1039789998 455 PASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPAsSSPPQVTSDTPASSSP 512
Cdd:PHA03291 218 PETTPTPSTTTSPPSTTIPAPSTTIAAPQAGTTPEAEGTPA-PPTPGGGEAPPANATP 274
|
|
| PHA03193 |
PHA03193 |
tegument protein VP11/12; Provisional |
347-476 |
1.04e-03 |
|
tegument protein VP11/12; Provisional
Pssm-ID: 177555 Cd Length: 594 Bit Score: 44.32 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 347 TSDTPASSsppQGTLDTPSSSsppqGTSDTPASSSPPQGTSETPASNSPPQGTsETPGFSSPPQVTTATLVSSSppQVTS 426
Cdd:PHA03193 456 IHEALANN---GQAIFPECFS----GDLPPIAQALLSADELPNDTTASTSNEM-KGDAECPAAQDAAAILPASF--QIEN 525
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1039789998 427 ETPASSSPTQVTSetpASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQV 476
Cdd:PHA03193 526 GGAADGSGLAIPA---AMCDATAVESPSTVAETPPERLLAAESGPRCKAT 572
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
434-560 |
1.04e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.09 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 434 PTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTS----DTPAS 509
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRaqgaTKAKK 440
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1039789998 510 SSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQ-------VTSETPA 560
Cdd:PRK07994 441 SEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATnpvevkkEPVATPK 498
|
|
| PHA03193 |
PHA03193 |
tegument protein VP11/12; Provisional |
433-583 |
1.06e-03 |
|
tegument protein VP11/12; Provisional
Pssm-ID: 177555 Cd Length: 594 Bit Score: 43.94 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 433 SPTQVTSETPASSSPTqvtSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSD-----TPASSSPPQ-VTSDT 506
Cdd:PHA03193 441 SPFQRKRAMPEDGGEI---HEALANNGQAIFPECFSGDLPPIAQALLSADELPNDTTASTsnemkGDAECPAAQdAAAIL 517
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 507 PASSsppQVTSETPASSSPPQVTSDtsaSISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPT------NM 580
Cdd:PHA03193 518 PASF---QIENGGAADGSGLAIPAA---MCDATAVESPSTVAETPPERLLAAESGPRCKATAKHKGGSSKVEeilrrlRM 591
|
...
gi 1039789998 581 TSD 583
Cdd:PHA03193 592 ASD 594
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
487-620 |
1.07e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.09 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 487 PQVTSDTPASssPPQVTSDTPASssppQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTN 566
Cdd:PRK07994 361 PAAPLPEPEV--PPQSAAPAASA----QATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQG 434
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1039789998 567 mtSDTPASSSPTNMTSDTPASSSPTNMTSDTP-ASSSPPWPVITEVTRPESTIPA 620
Cdd:PRK07994 435 --ATKAKKSEPAAASRARPVNSALERLASVRPaPSALEKAPAKKEAYRWKATNPV 487
|
|
| PLN02217 |
PLN02217 |
probable pectinesterase/pectinesterase inhibitor |
345-444 |
1.11e-03 |
|
probable pectinesterase/pectinesterase inhibitor
Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 44.31 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 345 QGTSDTPASSSP---------PQGTLDTPSSSSPPQ---GTSDTPASSSPPQGTSETPASNSPPQGTSE--TPGFSSP-- 408
Cdd:PLN02217 545 QGDAWIPGKGVPyipglfagnPGSTNSTPTGSAASSnttFSSDSPSTVVAPSTSPPAGHLGSPPATPSKivSPSTSPPas 624
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1039789998 409 ----PQVTTATLVSSSPPQVTSETPASSSPTQVTSETPAS 444
Cdd:PLN02217 625 hlgsPSTTPSSPESSIKVASTETASPESSIKVASTESSVS 664
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
485-609 |
1.12e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.93 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 485 SPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSAsiSPPQVISDTPASSSPPQVTSETPASSSP 564
Cdd:PRK14951 372 AAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAA--PPAPVAAPAAAAPAAAPAAAPAAVALAP 449
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1039789998 565 TNMTSDTPASSSPTNMTSDTPASSSPtnmtSDTPASSSPPWPVIT 609
Cdd:PRK14951 450 APPAQAAPETVAIPVRVAPEPAVASA----APAPAAAPAAARLTP 490
|
|
| KLF12_N |
cd21441 |
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as ... |
425-486 |
1.18e-03 |
|
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as Krueppel-like transcription factor 12, KLF12) regulates, by transcriptionally repressing Nur77 expression, endometrial decidualization, which is a prerequisite for successful implantation and the establishment of pregnancy. It is involved in the maturation processes of kidney collecting ducts after birth, and is able to increase the promoter activity of the UT-A1 urea transporter promoter by binding to the CACCC motif. KLF12 has also been found to promote colorectal cancer growth is also involved in the invasion and apoptosis of basal-like breast carcinoma. KLF12 belongs to a family of proteins called the Specificity Protein (SP)/KLF family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. Although these factors bind to similar elements in vitro, they have distinct activities in vivo depending on their expression profile and the sequence of the N-terminal activation/repression domain, which differ between members. KLF12 contains an N-terminal domain that is related to the N-terminal repression domain of KLF8.
Pssm-ID: 410608 [Multi-domain] Cd Length: 197 Bit Score: 42.30 E-value: 1.18e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039789998 425 TSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSP 486
Cdd:cd21441 65 TSPTAVSSSPVSMTASASPSSSSSSSSSSSRPASSPTVITSVSSASSVPTVLTPGPLVASAS 126
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
363-565 |
1.18e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 44.05 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 363 TPSSSSPPQGTSDTPASSSP--PQGTSETPASNSPPQGTSETPGFSSPPQVTTAtlVSSSPPQVTSETPASSSPTqvtse 440
Cdd:PRK14086 89 DPSAGEPAPPPPHARRTSEPelPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTA--RPAYPAYQQRPEPGAWPRA----- 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 441 tPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPpqvtsetP 520
Cdd:PRK14086 162 -ADDYGWQQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHPRPDWDRPRRDRTDRPEPP-------P 233
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1039789998 521 ASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPT 565
Cdd:PRK14086 234 GAGHVHRGGPGPPERDDAPVVPIRPSAPGPLAAQPAPAPGPGEPT 278
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
419-512 |
1.24e-03 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 43.48 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 419 SSPPQVTSETPASSSPTQVtseTPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSS 498
Cdd:PRK10856 161 SVPLDTSTTTDPATTPAPA---APVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPL 237
|
90
....*....|....
gi 1039789998 499 PPQVTSDTPASSSP 512
Cdd:PRK10856 238 PTDQAGVSTPAADP 251
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
471-600 |
1.28e-03 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 43.95 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 471 SSPTQVTTATLVSS-----SPPQVTSDTPASSSP-PQVTSDTPASSSPPQVTSETPASSSP--PQVTSDTSASISPPQVI 542
Cdd:PHA03269 21 NLNTNIPIPELHTSaatqkPDPAPAPHQAASRAPdPAVAPTSAASRKPDLAQAPTPAASEKfdPAPAPHQAASRAPDPAV 100
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1039789998 543 SDTPASSSPPQvtsetpASSSPTNMTSDTPASS-SPTNMTSDTPassSPTNMTSDTPAS 600
Cdd:PHA03269 101 APQLAAAPKPD------AAEAFTSAAQAHEAPAdAGTSAASKKP---DPAAHTQHSPPP 150
|
|
| PHA03193 |
PHA03193 |
tegument protein VP11/12; Provisional |
409-570 |
1.32e-03 |
|
tegument protein VP11/12; Provisional
Pssm-ID: 177555 Cd Length: 594 Bit Score: 43.94 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 409 PQVTTATLVSSSPPqvTSETPASSSPTQVTSETPASSSPtqvtsdtPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQ 488
Cdd:PHA03193 442 PFQRKRAMPEDGGE--IHEALANNGQAIFPECFSGDLPP-------IAQALLSADELPNDTTASTSNEMKGDAECPAAQD 512
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 489 VTSDTPASSsppQVTSDTPASSSPPQVTSetpASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPT--- 565
Cdd:PHA03193 513 AAAILPASF---QIENGGAADGSGLAIPA---AMCDATAVESPSTVAETPPERLLAAESGPRCKATAKHKGGSSKVEeil 586
|
....*...
gi 1039789998 566 ---NMTSD 570
Cdd:PHA03193 587 rrlRMASD 594
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
476-627 |
1.43e-03 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 43.56 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 476 VTTATLVSSSppqvTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQV-ISDTPASSSP--P 552
Cdd:PHA03269 9 IITIACINLI----IANLNTNIPIPELHTSAATQKPDPAPAPHQAASRAPDPAVAPTSAASRKPDLaQAPTPAASEKfdP 84
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1039789998 553 QVTSETPASSSPTNMTSDTPAsSSPTNMTSDTPASSS---PTNMTSDTPASSSPPWPVITEVTRPESTIpAGRSLANI 627
Cdd:PHA03269 85 APAPHQAASRAPDPAVAPQLA-AAPKPDAAEAFTSAAqahEAPADAGTSAASKKPDPAAHTQHSPPPFA-YTRSMEHI 160
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
418-499 |
1.50e-03 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 43.09 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 418 SSSPPQVTSETPA--SSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPA 495
Cdd:PRK10856 168 TTTDPATTPAPAApvDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAGVSTP 247
|
....
gi 1039789998 496 SSSP 499
Cdd:PRK10856 248 AADP 251
|
|
| CTD |
smart01104 |
Spt5 C-terminal nonapeptide repeat binding Spt4; The C-terminal domain of the transcription ... |
426-535 |
1.66e-03 |
|
Spt5 C-terminal nonapeptide repeat binding Spt4; The C-terminal domain of the transcription elongation factor protein Spt5 is necessary for binding to Spt4 to form the functional complex that regulates early transcription elongation by RNA polymerase II. The complex may be involved in pre-mRNA processing through its association with mRNA capping enzymes. This CTD domain carries a regular nonapeptide repeat that can be present in up to 18 copies, as in S. pombe. The repeat has a characteristic TPA motif.
Pssm-ID: 215026 [Multi-domain] Cd Length: 121 Bit Score: 40.58 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 426 SETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSdTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSD 505
Cdd:smart01104 12 SKTPAWGSRTPGTAAGGAPTARGGSGSRTPAWGGAGSRTP-AWGGAGPTGSRTPAWGGASAWGNKSSEGSASSWAAGPGG 90
|
90 100 110
....*....|....*....|....*....|..
gi 1039789998 506 TPASSSP--PQVTSeTPASSSPPQVTSDTSAS 535
Cdd:smart01104 91 AYGAPTPgyGGTPS-AYGPATPGGGAMAGSAS 121
|
|
| COG5099 |
COG5099 |
RNA-binding protein of the Puf family, translational repressor [Translation, ribosomal ... |
155-718 |
1.72e-03 |
|
RNA-binding protein of the Puf family, translational repressor [Translation, ribosomal structure and biogenesis];
Pssm-ID: 227430 [Multi-domain] Cd Length: 777 Bit Score: 43.58 E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 155 RNEFGPGPLLPMKRRGAETERHMIPGNGPPLAMCHQPAPPELFetlcFPIDPASSAPPKATHRMTITSLTGRpQVTSDTL 234
Cdd:COG5099 1 PNSDTMNNLLPSIKSQLHHSKKSPPSSTTSQELMNGNSTPNSF----SPIPSKASSSATFTLNLPINNSVNH-KITSSSS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 235 ASSSPPqgtsdTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSppqvtsatsas 314
Cdd:COG5099 76 SRRKPS-----GSWSVAISSSTSGSQSLLMELPSSSFNPSTSSRNKSNSALSSTQQGNANSSVTLSSST----------- 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 315 sspPQGTSDTPASSSPPQVTSAtsasssppqgTSDTpASSSPPQGTLDTPSSSSPPQGtsdtPASSSPPQGTSETpaSNS 394
Cdd:COG5099 140 ---ASSMFNSNKLPLPNPNHSN----------SATT-NQSGSSFINTPASSSSQPLTN----LVVSSIKRFPYLT--SLS 199
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 395 PPQGTSETPgfsSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSpTQVTSDTPASNSPPQGTSDTPGFSSPT 474
Cdd:COG5099 200 PFFNYLIDP---SSDSATASADTSPSFNPPPNLSPNNLFSTSDLSPLPDTQS-VENNIILNSSSSINELTSIYGSVPSIR 275
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 475 qvttaTLVSSSPPQVTSDTPASSSppqvtSDTPASSSPPQVTSETPASSSPPQVTSdtsaSISPPqvisdtPASSSPPQV 554
Cdd:COG5099 276 -----NLRGLNSALVSFLNVSSSS-----LAFSALNGKEVSPTGSPSTRSFARVLP----KSSPN------NLLTEILTT 335
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 555 TSETPASSSPTNMTS--DTPASSSPTNMTSdtpaSSSPTNMTSDTPASSSPPWPVITEVtrpesTIPAGRSLANITskaq 632
Cdd:COG5099 336 GVNPPQSLPSLLNPVflSTSTGFSLTNLSG----YLNPNKNLKKNTLSSLSNLGYSSNV-----PSPSSSESTRNI---- 402
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 633 edspLGVISTHPQMSFQSSTSQQALDETAGER-----VPTIPDFQAHSEF-QKACAILQRLRDflpTSPTSAQVSVANLL 706
Cdd:COG5099 403 ----LGNISPNFKTSSNLTNLNSLLKEKLSNSssvsaTDILGPSIIVSCKdQHGSRFLQKLLD---SNSSPEIEVIFNEI 475
|
570
....*....|..
gi 1039789998 707 IDLSEQLLVLPF 718
Cdd:COG5099 476 LDQLVELSSDYF 487
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
391-485 |
1.74e-03 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 43.09 E-value: 1.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 391 ASNSPPQGTSE--TPGFSSPPQVTTATLVSSSPPQVTSETPASSSPT--QVTSETPASSSPTQVTSDTPASNSPPQGTSD 466
Cdd:PRK10856 152 AELSQNSGQSVplDTSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPapAVDPQQNAVVAPSQANVDTAATPAPAAPATP 231
|
90 100
....*....|....*....|
gi 1039789998 467 TPGFSSPT-QVTTATLVSSS 485
Cdd:PRK10856 232 DGAAPLPTdQAGVSTPAADP 251
|
|
| PLN02983 |
PLN02983 |
biotin carboxyl carrier protein of acetyl-CoA carboxylase |
430-604 |
1.75e-03 |
|
biotin carboxyl carrier protein of acetyl-CoA carboxylase
Pssm-ID: 215533 [Multi-domain] Cd Length: 274 Bit Score: 42.52 E-value: 1.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 430 ASSSPTQVTSETPASSSPTQvTSDTPASNSPPQgtsdtPGFSSPTQ----------VTTATL----VSSSPPQVTSDTPA 495
Cdd:PLN02983 1 MASLSVPCAKTAAAAANVGS-RLSRSSFRLQPK-----PNISFPSKgpnpkrsavpKVKAQLnevaVDGSSNSAKSDDPK 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 496 SSSPPQVTSDTPA--SSSPPQVTSETPASSSPPQVTS-----DtSASISPPQ--------VISDTPASSSPPqvtseTPA 560
Cdd:PLN02983 75 SEVAPSEPKDEPPsnSSSKPNLPDEESISEFMTQVSSlvklvD-SRDIVELQlkqldcelVIRKKEALPQPP-----PPA 148
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1039789998 561 S---SSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPA----SSSPP 604
Cdd:PLN02983 149 PvvmMQPPPPHAMPPASPPAAQPAPSAPASSPPPTPASPPPAkapkSSHPP 199
|
|
| Caprin-1_C |
pfam12287 |
Cytoplasmic activation/proliferation-associated protein-1 C term; This family of proteins is ... |
322-553 |
1.76e-03 |
|
Cytoplasmic activation/proliferation-associated protein-1 C term; This family of proteins is found in eukaryotes. Proteins in this family are typically between 343 and 708 amino acids in length. This family is the C terminal region of caprin-1. Caprin-1 is a protein involved in regulating cellular proliferation. In mutated phenotypes, the G1 phase of the cell cycle is greatly lengthened, impairing normal proliferation. The C terminal region of caprin-1 contains RGG motifs which are characteriztic of RNA binding domains. It is possible that caprin-1 functions through an RNA binding mechanism.
Pssm-ID: 463522 [Multi-domain] Cd Length: 320 Bit Score: 42.86 E-value: 1.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 322 SDTPASSSP--PQVTSATSASSSPPQGTSDTPASSSPPQGTLDTPSS---SSPPQGTSDTPASSSPPQGTSETPASNSPP 396
Cdd:pfam12287 32 SAQPPSQSPdlSQMVCPPASPEQRLSQQSDVLQQPEQTQVSPVSPSSnacASSGSEYQFHTSEPPQPEAIDPIQSSMSLP 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 397 qgtsetpgfSSPPQvTTATLVSSSPPQVTSETPASSSPTQVtsetpaSSSPTQVTSDTPASNSP-PQGTSDTPGFSSPTQ 475
Cdd:pfam12287 112 ---------SELAP-PSPPLSPASQPQVFQSKPASSSGINV------NAAPFQSMQTVFNVNAPvPPRNEQELKESSQYS 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 476 VTTATLVSSSPPQvtsdtpassSPPQvtSDTPASssppQVTSETPASSSPPQVTSDTSASIS--PPQvisdTPASSSPPQ 553
Cdd:pfam12287 176 SGYNQSFSSQSTQ---------TVPQ--CQLPSE----QLEQTVVGAYHPDGTIQVSNGHLAfyPAQ----TNGFPRPPQ 236
|
|
| PRK11901 |
PRK11901 |
hypothetical protein; Reviewed |
484-655 |
1.79e-03 |
|
hypothetical protein; Reviewed
Pssm-ID: 237015 [Multi-domain] Cd Length: 327 Bit Score: 42.75 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 484 SSPPQVTSDTPASSSPPQVTS----DTPASSSPPQVTSETPASSSPPQVTSD--TSASISPPQVISDTPASSSPPQVTSE 557
Cdd:PRK11901 55 GSALKSPTEHESQQSSNNAGAekniDLSGSSSLSSGNQSSPSAANNTSDGHDasGVKNTAPPQDISAPPISPTPTQAAPP 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 558 TPASSS-----PTNMTS----------------DTPASSSPTnmtsdTPASSSPTNMTSDTPASSSPPWPVITE-----V 611
Cdd:PRK11901 135 QTPNGQqrielPGNISDalsqqqgqvnaasqnaQGNTSTLPT-----APATVAPSKGAKVPATAETHPTPPQKPatkkpA 209
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1039789998 612 TRPESTIPAGRSLANITSKAQEDSPLGVISTHPQMSFQ---SSTSQQ 655
Cdd:PRK11901 210 VNHHKTATVAVPPATSGKPKSGAASARALSSAPASHYTlqlSSASRS 256
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
494-650 |
1.89e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.16 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 494 PASSSPPQVTSdtpASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDT---PASSSPPQVTSETPASSSPTNMTSD 570
Cdd:PRK14951 366 PAAAAEAAAPA---EKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPaapPAAAPPAPVAAPAAAAPAAAPAAAP 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 571 TPASSSPTNMTSDTPASSSPTNMTSDTPASSSPPWPVIT--EVTRPESTIPAGRSLANITSKAQEDSPLGVISthpQMSF 648
Cdd:PRK14951 443 AAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAapAAARLTPTEEGDVWHATVQQLAAAEAITALAR---ELAL 519
|
..
gi 1039789998 649 QS 650
Cdd:PRK14951 520 QS 521
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
414-552 |
1.89e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 43.32 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 414 ATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTsdtPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSdt 493
Cdd:PRK07994 363 APLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVP---PPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK-- 437
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 494 PASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSAS-ISPPQVISDTPASSSPP 552
Cdd:PRK07994 438 AKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYrWKATNPVEVKKEPVATP 497
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
489-623 |
1.99e-03 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 43.02 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 489 VTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSS-PPQVTSdTSASISPPQVIsdTPASSSPPQVTSETPASSSPTNM 567
Cdd:PHA03291 150 VEGATNASLFPLGLAAFPAEGTLAAPPLGEGSADGScDPALPL-SAPRLGPADVF--VPATPRPTPRTTASPETTPTPST 226
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1039789998 568 TSDTPASSSPTNMTSDTPASSSPTNMTSDTPAsssPPWPVITEvTRPESTIPAGRS 623
Cdd:PHA03291 227 TTSPPSTTIPAPSTTIAAPQAGTTPEAEGTPA---PPTPGGGE-APPANATPAPEA 278
|
|
| KLF12_N |
cd21441 |
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as ... |
529-590 |
2.04e-03 |
|
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as Krueppel-like transcription factor 12, KLF12) regulates, by transcriptionally repressing Nur77 expression, endometrial decidualization, which is a prerequisite for successful implantation and the establishment of pregnancy. It is involved in the maturation processes of kidney collecting ducts after birth, and is able to increase the promoter activity of the UT-A1 urea transporter promoter by binding to the CACCC motif. KLF12 has also been found to promote colorectal cancer growth is also involved in the invasion and apoptosis of basal-like breast carcinoma. KLF12 belongs to a family of proteins called the Specificity Protein (SP)/KLF family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. Although these factors bind to similar elements in vitro, they have distinct activities in vivo depending on their expression profile and the sequence of the N-terminal activation/repression domain, which differ between members. KLF12 contains an N-terminal domain that is related to the N-terminal repression domain of KLF8.
Pssm-ID: 410608 [Multi-domain] Cd Length: 197 Bit Score: 41.53 E-value: 2.04e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039789998 529 TSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASSSP 590
Cdd:cd21441 65 TSPTAVSSSPVSMTASASPSSSSSSSSSSSRPASSPTVITSVSSASSVPTVLTPGPLVASAS 126
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
325-532 |
2.10e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 43.03 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 325 PASSSPPQVTSATSASSSPPQGTSDTPASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPG 404
Cdd:PRK14948 364 FISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEE 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 405 -----FSSPPQVTT-------ATLVSSSPPQVT------------SETP--------ASSSPTQVTSETPASSSPTQVTS 452
Cdd:PRK14948 444 lwqqiLAKLELPSTrmllsqqAELVSLDSNRAViavspnwlgmvqSRKPlleqafakVLGRSIKLNLESQSGSASNTAKT 523
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 453 DTPASNSPPQGTSdTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPqvtsdtPASSSPPQVTSETPASSSPPQVTSDT 532
Cdd:PRK14948 524 PPPPQKSPPPPAP-TPPLPQPTATAPPPTPPPPPPTATQASSNAPAQI------PADSSPPPPIPEEPTPSPTKDSSPEE 596
|
|
| CytochromB561_N |
pfam09786 |
Cytochrome B561, N terminal; Members of this family are found in the N terminal region of ... |
417-577 |
2.11e-03 |
|
Cytochrome B561, N terminal; Members of this family are found in the N terminal region of cytochrome B561, as well as in various other putative uncharacterized proteins.
Pssm-ID: 462899 Cd Length: 579 Bit Score: 43.28 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 417 VSSSPPQVTSETPASSSPTQVTS---ETPASSSPTQVTSDTPASNSPPQGTSDTPGfssptqvttatlvssspPQVTSDT 493
Cdd:pfam09786 89 VQSKSPSKGTKTPSRLTNQQLGLlglKPNDSSFVTTHRKKPPKSKSSPQSPSPVLV-----------------PLHQSVS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 494 PASSSPPQVTSDTPASSSPPQVTSETPASSSppqvtsdtsasISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPA 573
Cdd:pfam09786 152 PSSSESRKGGDKSPAGSGKKLRSFSTSSKSP-----------ASPSVYLRGSPVPLNSSPLPSDRNYENSVQSSPEIDSA 220
|
....
gi 1039789998 574 SSSP 577
Cdd:pfam09786 221 VSTP 224
|
|
| KLF12_N |
cd21441 |
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as ... |
438-499 |
2.33e-03 |
|
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as Krueppel-like transcription factor 12, KLF12) regulates, by transcriptionally repressing Nur77 expression, endometrial decidualization, which is a prerequisite for successful implantation and the establishment of pregnancy. It is involved in the maturation processes of kidney collecting ducts after birth, and is able to increase the promoter activity of the UT-A1 urea transporter promoter by binding to the CACCC motif. KLF12 has also been found to promote colorectal cancer growth is also involved in the invasion and apoptosis of basal-like breast carcinoma. KLF12 belongs to a family of proteins called the Specificity Protein (SP)/KLF family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. Although these factors bind to similar elements in vitro, they have distinct activities in vivo depending on their expression profile and the sequence of the N-terminal activation/repression domain, which differ between members. KLF12 contains an N-terminal domain that is related to the N-terminal repression domain of KLF8.
Pssm-ID: 410608 [Multi-domain] Cd Length: 197 Bit Score: 41.53 E-value: 2.33e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039789998 438 TSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSP 499
Cdd:cd21441 65 TSPTAVSSSPVSMTASASPSSSSSSSSSSSRPASSPTVITSVSSASSVPTVLTPGPLVASAS 126
|
|
| KLF12_N |
cd21441 |
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as ... |
482-596 |
2.44e-03 |
|
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as Krueppel-like transcription factor 12, KLF12) regulates, by transcriptionally repressing Nur77 expression, endometrial decidualization, which is a prerequisite for successful implantation and the establishment of pregnancy. It is involved in the maturation processes of kidney collecting ducts after birth, and is able to increase the promoter activity of the UT-A1 urea transporter promoter by binding to the CACCC motif. KLF12 has also been found to promote colorectal cancer growth is also involved in the invasion and apoptosis of basal-like breast carcinoma. KLF12 belongs to a family of proteins called the Specificity Protein (SP)/KLF family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. Although these factors bind to similar elements in vitro, they have distinct activities in vivo depending on their expression profile and the sequence of the N-terminal activation/repression domain, which differ between members. KLF12 contains an N-terminal domain that is related to the N-terminal repression domain of KLF8.
Pssm-ID: 410608 [Multi-domain] Cd Length: 197 Bit Score: 41.53 E-value: 2.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 482 VSSSPPQ--VTSDTPASSSPPQVTSDTPASSSPpqvtseTPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETP 559
Cdd:cd21441 35 VKAEPPEdsLSTDHFQTQTEPVDLSINKARTSP------TAVSSSPVSMTASASPSSSSSSSSSSSRPASSPTVITSVSS 108
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1039789998 560 ASSSPTNMTSDTPASSSPT-------NMTSDTPaSSSPTNMTSD 596
Cdd:cd21441 109 ASSVPTVLTPGPLVASASGvggqqflHIIHPVP-PSSPMNLQSN 151
|
|
| NupH_GANP |
pfam16768 |
Nucleoporin homology of Germinal-centre associated nuclear protein; NupH_GANP is the ... |
354-524 |
2.46e-03 |
|
Nucleoporin homology of Germinal-centre associated nuclear protein; NupH_GANP is the nucleoporin-homology domain at the N-terminus of human GANP or germinal-centre associated nuclear proteins. GANP is part of the TREX-2 complex that links transcription with nuclear messenger RNA export, and it associates with the mRNP particle through the interaction of the NupH_GANP with NXF1, the export factor. This attachment mediates efficient delivery of mRNPs to nuclear pore complexes.
Pssm-ID: 435572 [Multi-domain] Cd Length: 292 Bit Score: 42.20 E-value: 2.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 354 SSPPQGTLDTPSSSSPPQGTSDTPA---SSSPPQGTSETPASNSPPQGTSETPGFS-SPPqvtTATLVSSSPPQVTSETP 429
Cdd:pfam16768 56 SSFPTTSGVSHSSSGQTLGFTQTSGvglFSGLEHTPSFVATSGPSSSSVPSNPGFSfKSP---TNLGAFPSTSTFGPESG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 430 ASSSPTQVTSETPASSSPTQVTSDTPASNSPP-----QGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSppqVTS 504
Cdd:pfam16768 133 EVASSGFGKTEFSFKPPENAVFRPIFGAESEPektqsQITSGFFTFSHPVSSGPGGLAPFSFSQVTSSSATSSN---FTF 209
|
170 180
....*....|....*....|
gi 1039789998 505 DTPASSSPPQvTSETPASSS 524
Cdd:pfam16768 210 SKPVSSNNSS-SAFAPALSS 228
|
|
| PAP1 |
pfam08601 |
Transcription factor PAP1; The transcription factor Pap1 regulates antioxidant-gene ... |
272-470 |
2.46e-03 |
|
Transcription factor PAP1; The transcription factor Pap1 regulates antioxidant-gene transcription in response to H2O2. This region is cysteine rich. Alkylation of cysteine residues following treatment with a cysteine alkylating agent can mask the accessibility of the nuclear exporter Crm1, triggering nuclear accumulation and Pap1 dependent transcriptional expression.
Pssm-ID: 369990 Cd Length: 363 Bit Score: 42.54 E-value: 2.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 272 TPASSSPPqvtsatsasssPPQGTSDTPASSSPPQVTSATSASSsppqGTSDTPASSSPPQVTSATSASSSPPQGTSDTP 351
Cdd:pfam08601 53 PNASTSTP-----------DSQPPPSASSSTTPNQGSNGLNAFT----GEDNNNYSNSAANPGATRGSTASSARSQSSPY 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 352 ASSSPPQGTLDTPSSSSPPQGTsdtPASSSppqGTSETPASNSPPQGTSetpgfssppqvTTATLVSSSPPQVTSETPAS 431
Cdd:pfam08601 118 SFGSGTSTSSDSPSSSSSSHQG---QLSSC---GTSPEPSTQSPGGQKS-----------VETMIGEEQCAHGTIDGEKS 180
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1039789998 432 S-SPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGF 470
Cdd:pfam08601 181 FcAKLGMACGNINNPIPAAMSKSNSLSNTPGHASNDSNGL 220
|
|
| PHA03249 |
PHA03249 |
DNA packaging tegument protein UL25; Provisional |
429-561 |
2.89e-03 |
|
DNA packaging tegument protein UL25; Provisional
Pssm-ID: 223023 Cd Length: 653 Bit Score: 42.69 E-value: 2.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 429 PASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTsDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSS--PPQVTSDT 506
Cdd:PHA03249 33 PRPRAPTEDLDRMEAGLSSYSSSSDNKSSFEVVSET-DSGSEAEAERGRRAGMGGRNKATKPSRRNKTTQcrPTSLALAT 111
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039789998 507 PASSSPPQVTSETPASSSPPQVTSDTS-------ASISPPQVISDTPASSSPPQVTSETPAS 561
Cdd:PHA03249 112 AATMPATPSSGKSPKVSSPPSIPSLSEedegaerNSGGDDSSHTDNESTQSQPEADDEPDLA 173
|
|
| Mating_C |
pfam12737 |
C-terminal domain of homeodomain 1; Mating in fungi is controlled by the loci that determine ... |
167-534 |
2.96e-03 |
|
C-terminal domain of homeodomain 1; Mating in fungi is controlled by the loci that determine the mating type of an individual, and only individuals with differing mating types can mate. Basidiomycete fungi have evolved a unique mating system, termed tetrapolar or bifactorial incompatibility, in which mating type is determined by two unlinked loci; compatibility at both loci is required for mating to occur. The multi-allelic tetrapolar mating system is considered to be a novel innovation that could have only evolved once, and is thus unique to the mushroom fungi. This domain is C-terminal to the homeodomain transcription factor region.
Pssm-ID: 372279 [Multi-domain] Cd Length: 412 Bit Score: 42.28 E-value: 2.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 167 KRRGAETERHMIPGNGPPLAMChqpAPPELFETLCFPIDPASSAP-----PKATHRMTITSLT---------GRPQvtSD 232
Cdd:pfam12737 50 KKRKRQAERSMRDALAYPSPER---SPASSPERNLSPQVDVCQLTirqnnLNLKRRSSSSSDVdssnaerchKRPR--LD 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 233 TLASSSPPQGTSDTPASSSPPQVTSATSAsssppqgTSDTPASSSPPQVTSATSASSSPPQGTSD-TPASSSPPQvtsat 311
Cdd:pfam12737 125 SPSSSSSPEKCLPSPAPSEQEALSEISAA-------CGPTPSTLTPLNVAPSLTPSKKRKRCLSDgFDGPKRPPN----- 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 312 SASSSPPQGTSDT-PASSSPPQVtsatsasssppqgtSDTPASSSPPQGTLdtpSSSSPPQGTSDTPASSSPpqgtSETP 390
Cdd:pfam12737 193 KRVQPRPQTVSDPfPTSTSIPEW--------------DEWLQNHMSPSLTL---HGDIPPPVSVEAPDSNTP----LDIE 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 391 ASNSPPQgtsetpgfsspPQVTTATLVSSSPPQVTSETPASSSPtqVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGF 470
Cdd:pfam12737 252 IFNFPYH-----------PDLTPSPAPSLSDSVIEVATPTTESD--YMCNGTLRQTFSWFEFDFPELIQPTNTPASNNEL 318
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 471 SSPTQVTTATLVSSSPPQV------TSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSA 534
Cdd:pfam12737 319 SLPFDPSTDIVVSRTILPLldwrsqSFLSQTFASPPHSILRSNSSSPDVSAFALDLTPAFTPITYSLSES 388
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
346-437 |
3.41e-03 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 41.94 E-value: 3.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 346 GTSDTPASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASnsppQGTSETPGFSSPPQVTTATLVSSSPPQVT 425
Cdd:PRK10856 167 STTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPS----QANVDTAATPAPAAPATPDGAAPLPTDQA 242
|
90
....*....|..
gi 1039789998 426 SETPASSSPTQV 437
Cdd:PRK10856 243 GVSTPAADPNAL 254
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
351-459 |
3.79e-03 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 41.86 E-value: 3.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 351 PA-SSSPPQGTLDTPS-SSSPPQGTSDTPA-SSSPPQGTSETPA-SNSPPQGTSETP--GFSSPPQVTTATLVSSSPPQV 424
Cdd:PTZ00436 229 PAkAAAPPAKAAAAPAkAAAAPAKAAAPPAkAAAPPAKAAAPPAkAAAPPAKAAAPPakAAAPPAKAAAAPAKAAAAPAK 308
|
90 100 110
....*....|....*....|....*....|....*.
gi 1039789998 425 TSETPA-SSSPTQVTSETPASSSPTQVTSDTPASNS 459
Cdd:PTZ00436 309 AAAAPAkAAAPPAKAAAPPAKAATPPAKAAAPPAKA 344
|
|
| KLF12_N |
cd21441 |
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as ... |
460-525 |
4.04e-03 |
|
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as Krueppel-like transcription factor 12, KLF12) regulates, by transcriptionally repressing Nur77 expression, endometrial decidualization, which is a prerequisite for successful implantation and the establishment of pregnancy. It is involved in the maturation processes of kidney collecting ducts after birth, and is able to increase the promoter activity of the UT-A1 urea transporter promoter by binding to the CACCC motif. KLF12 has also been found to promote colorectal cancer growth is also involved in the invasion and apoptosis of basal-like breast carcinoma. KLF12 belongs to a family of proteins called the Specificity Protein (SP)/KLF family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. Although these factors bind to similar elements in vitro, they have distinct activities in vivo depending on their expression profile and the sequence of the N-terminal activation/repression domain, which differ between members. KLF12 contains an N-terminal domain that is related to the N-terminal repression domain of KLF8.
Pssm-ID: 410608 [Multi-domain] Cd Length: 197 Bit Score: 40.76 E-value: 4.04e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1039789998 460 PPQGTSDTPGFSSPTQV---------TTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSP 525
Cdd:cd21441 39 PPEDSLSTDHFQTQTEPvdlsinkarTSPTAVSSSPVSMTASASPSSSSSSSSSSSRPASSPTVITSVSSASSVP 113
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
347-501 |
4.06e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.16 E-value: 4.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 347 TSDTPASSSPPQG----TLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTAtlVSSSPP 422
Cdd:PRK07994 367 EPEVPPQSAAPAAsaqaTAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKA--KKSEPA 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 423 QVTSETPASSSPTQVTSETPASSSPTQVTSDTPASN---SPPQGTSDTPGfSSPTQVTTATLVSSSPPQVTSDTPASSSP 499
Cdd:PRK07994 445 AASRARPVNSALERLASVRPAPSALEKAPAKKEAYRwkaTNPVEVKKEPV-ATPKALKKALEHEKTPELAAKLAAEAIER 523
|
..
gi 1039789998 500 PQ 501
Cdd:PRK07994 524 DP 525
|
|
| SAP130_C |
pfam16014 |
Histone deacetylase complex subunit SAP130 C-terminus; |
480-666 |
4.41e-03 |
|
Histone deacetylase complex subunit SAP130 C-terminus;
Pssm-ID: 464973 [Multi-domain] Cd Length: 371 Bit Score: 41.84 E-value: 4.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 480 TLVSSSPPQVTSDTPAS-----------SSPPQVTSDT---PASSSPPQVTSETPASSSPPQVTSDTSASISPPqvisdt 545
Cdd:pfam16014 1 ALGSSPRPSILRKKPATegakpkpdihvAVAPPVTVAVealPGQNSEQQTASASPPSQHPAQAIPTILAPAAPP------ 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 546 pasSSPPQVTSETPASSSptnMTSDTPASSSPTNMTSDTPASSSPTNMtsdtPASSSPPWPVITEVTRPESTipagrsla 625
Cdd:pfam16014 75 ---SQPSVVLSTLPAAMA---VTPPIPASMANVVAPPTQPAASSTAAC----AVSSVLPEIKIKQEAEPMDT-------- 136
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1039789998 626 nitskAQEDSPLGVISTHPQMSFQSSTsqqaLDETAGERVP 666
Cdd:pfam16014 137 -----SQSVPPLTPTSISPALTSLANN----LSVPAGDLLP 168
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
162-451 |
4.45e-03 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 42.22 E-value: 4.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 162 PLLPMKRRGAETERHMIPGNGPPLAMCHQPAPPELFETLCfPIDPASSAPPKATHRMTitsltgRPQVTSDTLASSSPPQ 241
Cdd:PLN03209 312 PLTPMEELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEA-PSPPIEEEPPQPKAVVP------RPLSPYTAYEDLKPPT 384
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 242 GTSDTPASSSPPQVTSATSASSSPPQGTSdtPASSSPPQVTSATSASSSPPQGTSDTPASS----SPPQvtsatsasssp 317
Cdd:PLN03209 385 SPIPTPPSSSPASSKSVDAVAKPAEPDVV--PSPGSASNVPEVEPAQVEAKKTRPLSPYARyedlKPPT----------- 451
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 318 pqGTSDTPASSSPPQVTSATSASssppqGTSDTPASSSPPQGTLDTPSSSSPpqgTSDTPASSSPPQGTSETPASNSPPQ 397
Cdd:PLN03209 452 --SPSPTAPTGVSPSVSSTSSVP-----AVPDTAPATAATDAAAPPPANMRP---LSPYAVYDDLKPPTSPSPAAPVGKV 521
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1039789998 398 GTSETPgfSSPPQVTTATLVSSSPPQVTSE---TPASSSPTQVTSETPASSSPTQVT 451
Cdd:PLN03209 522 APSSTN--EVVKVGNSAPPTALADEQHHAQpkpRPLSPYTMYEDLKPPTSPTPSPVL 576
|
|
| KLF10_11_N |
cd21974 |
N-terminal domain of Kruppel-like factor (KLF) 10, KLF11, and similar proteins; This subfamily ... |
363-528 |
4.50e-03 |
|
N-terminal domain of Kruppel-like factor (KLF) 10, KLF11, and similar proteins; This subfamily is composed of Kruppel-like factor or Krueppel-like factor (KLF) 10, KLF11, and similar proteins. KLF10 was first identified in human osteoblasts and plays a role in mediating estrogen (E2) signaling in bone and skeletal homeostasis and a regulatory role in tumor formation and metastasis. KLF11 is involved in cell growth, apoptosis, cellular inflammation and differentiation, endometriosis, and cholesterol, prostaglandin, neurotransmitter, fat, and sugar metabolism. KLF9, KLF10, KLF11, KLF13, KLF14, and KLF16 share a conserved a-helical motif AA/VXXL that mediates their binding to Sin3A and their activities as transcriptional repressors. KLF10/11 belong to a family of proteins, called the Specificity Protein (SP)/KLF family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. Members of the KLF family can act as activators or repressors of transcription depending on cell and promoter context. KLFs regulate various cellular functions, such as proliferation, differentiation, and apoptosis, as well as the development and homeostasis of several types of tissue. In addition to the C-terminal DNA-binding domain, each KLF also has a unique N-terminal activation/repression domain that confers specificity and allows it to bind specifically to a certain partner, leading to distinct activities in vivo. This model represents the N-terminal domain of KLF10, KLF11, and similar proteins.
Pssm-ID: 409243 [Multi-domain] Cd Length: 229 Bit Score: 41.07 E-value: 4.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 363 TPSSSSPpqgtSDTPASSSPPQGTSETPASNSPPQgtsetpgfsSPPQV-TTATLVSSSPPQVTSETPASSSPTQVTSET 441
Cdd:cd21974 32 TPSSDSS----DEDDAPESPKDFHSLSSLCMTPPY---------SPPFFeASHSPSVASLHPPSAASSQPPPEPESSEPP 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 442 PASSSPTQVTSdtpasnsppqgtsdtpgfssptqVT--TATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSET 519
Cdd:cd21974 99 AASPQRAQATS-----------------------VIrhTADPVPVSPPPVLCQMLPVSSSSGVIVAFLKAPQQPSPQPQK 155
|
....*....
gi 1039789998 520 PASSSPPQV 528
Cdd:cd21974 156 PALPQPQVV 164
|
|
| TYA |
pfam01021 |
Ty transposon capsid protein; Ty are yeast transposons. A 5.7kb transcript codes for p3 a ... |
423-543 |
4.52e-03 |
|
Ty transposon capsid protein; Ty are yeast transposons. A 5.7kb transcript codes for p3 a fusion protein of TYA and TYB. The TYA protein is analogous to the gag protein of retroviruses. TYA a is cleaved to form 46kd protein which can form mature virion like particles. This entry corresponds to the capsid protein from Ty1 and Ty2 transposons.
Pssm-ID: 425992 Cd Length: 384 Bit Score: 41.87 E-value: 4.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 423 QVTSETPASSSPTQVtSETPASSSPTqvtsdtPASNSPPQ-GTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSP-- 499
Cdd:pfam01021 33 KANSQQTTTPGSSAV-PENHHHASPQ------PASVPPPQnGPYSQQCMMTPNQANPSGWPFYGHPSMMPYTPYQMSPmy 105
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1039789998 500 ---------PQVTSD--TPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVIS 543
Cdd:pfam01021 106 fppgpqsqfPQYPSSvgTPLSTPSPESGNTFTDSSSAKSDMTSTNKYVRPPPILT 160
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
345-510 |
4.61e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.16 E-value: 4.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 345 QGTSDTPAssSPPQGTLDTPSSssppQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQV 424
Cdd:PRK07994 362 AAPLPEPE--VPPQSAAPAASA----QATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGA 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 425 TSetPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFS-SPTQVTTATLVSSSPPQVTSDTPASSSPPQVT 503
Cdd:PRK07994 436 TK--AKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRwKATNPVEVKKEPVATPKALKKALEHEKTPELA 513
|
....*..
gi 1039789998 504 SDTPASS 510
Cdd:PRK07994 514 AKLAAEA 520
|
|
| PLN02217 |
PLN02217 |
probable pectinesterase/pectinesterase inhibitor |
321-419 |
4.79e-03 |
|
probable pectinesterase/pectinesterase inhibitor
Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 42.00 E-value: 4.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 321 TSDTPASSSPPqvtsatsassSPPQGTSDTPA-----SSSPPQGTLDTPSSSSPPQGTSDTpassSPPQGT----SETPA 391
Cdd:PLN02217 569 TNSTPTGSAAS----------SNTTFSSDSPStvvapSTSPPAGHLGSPPATPSKIVSPST----SPPASHlgspSTTPS 634
|
90 100
....*....|....*....|....*...
gi 1039789998 392 SNSPPQGTSETPGFSSPPQVTTATLVSS 419
Cdd:PLN02217 635 SPESSIKVASTETASPESSIKVASTESS 662
|
|
| Mating_C |
pfam12737 |
C-terminal domain of homeodomain 1; Mating in fungi is controlled by the loci that determine ... |
441-757 |
5.05e-03 |
|
C-terminal domain of homeodomain 1; Mating in fungi is controlled by the loci that determine the mating type of an individual, and only individuals with differing mating types can mate. Basidiomycete fungi have evolved a unique mating system, termed tetrapolar or bifactorial incompatibility, in which mating type is determined by two unlinked loci; compatibility at both loci is required for mating to occur. The multi-allelic tetrapolar mating system is considered to be a novel innovation that could have only evolved once, and is thus unique to the mushroom fungi. This domain is C-terminal to the homeodomain transcription factor region.
Pssm-ID: 372279 [Multi-domain] Cd Length: 412 Bit Score: 41.51 E-value: 5.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 441 TPASSSPTQVTSDTPASNSPpqGTSDTPGFSSptqvttatlvSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETP 520
Cdd:pfam12737 72 SPASSPERNLSPQVDVCQLT--IRQNNLNLKR----------RSSSSSDVDSSNAERCHKRPRLDSPSSSSSPEKCLPSP 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 521 ASSSPPQVtSDTSASISPpqvisdTPASSSPPQVTSETPASSSPTNMTSD-TPASSSPTN--------MTSDT-PASSSP 590
Cdd:pfam12737 140 APSEQEAL-SEISAACGP------TPSTLTPLNVAPSLTPSKKRKRCLSDgFDGPKRPPNkrvqprpqTVSDPfPTSTSI 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 591 TN--------MTSDTPASSSPPWPVitEVTRPESTIPAGRSLANITSKAQED-SPLGVISTHPQMSFQSSTSQQALDETA 661
Cdd:pfam12737 213 PEwdewlqnhMSPSLTLHGDIPPPV--SVEAPDSNTPLDIEIFNFPYHPDLTpSPAPSLSDSVIEVATPTTESDYMCNGT 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 662 GERVPTIPDFQAHSEFQKACAILQRLRDFLPTSP-TSAQVSVANL-LIDLSEQ-----LLVLPFQKNNSWSSQTPAVSC- 733
Cdd:pfam12737 291 LRQTFSWFEFDFPELIQPTNTPASNNELSLPFDPsTDIVVSRTILpLLDWRSQsflsqTFASPPHSILRSNSSSPDVSAf 370
|
330 340 350
....*....|....*....|....*....|.
gi 1039789998 734 ------PFQP-LGRLTTTEKSSHQMAQQDME 757
Cdd:pfam12737 371 aldltpAFTPiTYSLSESEKEAKRRELEELE 401
|
|
| PHA03193 |
PHA03193 |
tegument protein VP11/12; Provisional |
492-604 |
5.18e-03 |
|
tegument protein VP11/12; Provisional
Pssm-ID: 177555 Cd Length: 594 Bit Score: 42.01 E-value: 5.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 492 DTPASSSPPQV-----TSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISD-----TPASSSPPQ-VTSETPA 560
Cdd:PHA03193 440 DSPFQRKRAMPedggeIHEALANNGQAIFPECFSGDLPPIAQALLSADELPNDTTASTsnemkGDAECPAAQdAAAILPA 519
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1039789998 561 SSSPTNmtsDTPASSSPTNMTSDtpaSSSPTNMTSDTPASSSPP 604
Cdd:PHA03193 520 SFQIEN---GGAADGSGLAIPAA---MCDATAVESPSTVAETPP 557
|
|
| PRK10672 |
PRK10672 |
endolytic peptidoglycan transglycosylase RlpA; |
359-448 |
5.25e-03 |
|
endolytic peptidoglycan transglycosylase RlpA;
Pssm-ID: 236733 [Multi-domain] Cd Length: 361 Bit Score: 41.59 E-value: 5.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 359 GTLDTPSSSSPPQGTSDT-PASSSPPQGTSETPAsnspPQGTSetpGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQV 437
Cdd:PRK10672 202 GGMGTPSVQPAPAPQGDVlPVSNSTLKSEDPTGA----PVTSS---GFLGAPTTLAPGVLEGSEPTPTAPSSAPATAPAA 274
|
90
....*....|.
gi 1039789998 438 TSETPASSSPT 448
Cdd:PRK10672 275 AAPQAAATSSS 285
|
|
| PHA03201 |
PHA03201 |
uracil DNA glycosylase; Provisional |
455-552 |
5.45e-03 |
|
uracil DNA glycosylase; Provisional
Pssm-ID: 165468 Cd Length: 318 Bit Score: 41.42 E-value: 5.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 455 PASNSPPQGTSDTPGFSSPTQVTTATLVSSSPpqvTSDTPASSSPPQVTSDTPASSSPPQvtsetpasSSPPQVTSDTSA 534
Cdd:PHA03201 4 ARSRSPSPPRRPSPPRPTPPRSPDASPEETPP---SPPGPGAEPPPGRAAGPAAPRRRPR--------GCPAGVTFSSSA 72
|
90
....*....|....*...
gi 1039789998 535 SISPPQVISDTPASSSPP 552
Cdd:PHA03201 73 PPRPPLGLDDAPAATPPP 90
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
247-497 |
5.58e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 41.46 E-value: 5.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 247 PASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQ---VTSATSASSSPPQGtsD 323
Cdd:PRK10905 23 PSTSSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAEQTAGNTQQDVSLPPISSTPTQgqtPVATDGQQRVEVQG--D 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 324 TPASSSPPQvtsatsassspPQGTSDTPASSSppqgTLDT-PSSSSPPQG---TSDTPASSSPPQGTSETPASNsppQGT 399
Cdd:PRK10905 101 LNNALTQPQ-----------NQQQLNNVAVNS----TLPTePATVAPVRNgnaSRQTAKTQTAERPATTRPARK---QAV 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 400 SEtpgfSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTA 479
Cdd:PRK10905 163 IE----PKKPQATAKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVG 238
|
250
....*....|....*...
gi 1039789998 480 TLVSSSPPQVTSDTPASS 497
Cdd:PRK10905 239 SLKSAPSSHYTLQLSSSS 256
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
225-395 |
5.65e-03 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 41.69 E-value: 5.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 225 GRP----QVTSDTLASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPqvtsaTSASSSPPQGTSDTPA 300
Cdd:pfam13254 195 GRPnsfkEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADTLSTDKEQSPA-----PTSASEPPPKTKELPK 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 301 SSSPPQVTSATSASSSPPQgTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQGTLDTPSSSSPPQgtsDTPASS 380
Cdd:pfam13254 270 DSEEPAAPSKSAEASTEKK-EPDTESSPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSPKPKPQSPPK---DFRANL 345
|
170
....*....|....*
gi 1039789998 381 SPPQGTSETPASNSP 395
Cdd:pfam13254 346 RSREVPKDKSKKDEP 360
|
|
| PRK11901 |
PRK11901 |
hypothetical protein; Reviewed |
456-635 |
5.77e-03 |
|
hypothetical protein; Reviewed
Pssm-ID: 237015 [Multi-domain] Cd Length: 327 Bit Score: 41.21 E-value: 5.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 456 ASNSPPQGTSDTpgfsSPTQVTTATLV----SSSPPQVTSDTPASSSPPQVTSD--TPASSSPPQVTSETPASSSP---- 525
Cdd:PRK11901 57 ALKSPTEHESQQ----SSNNAGAEKNIdlsgSSSLSSGNQSSPSAANNTSDGHDasGVKNTAPPQDISAPPISPTPtqaa 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 526 PQVTSDTSASISPPQVISD-----------------TPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPASS 588
Cdd:PRK11901 133 PPQTPNGQQRIELPGNISDalsqqqgqvnaasqnaqGNTSTLPTAPATVAPSKGAKVPATAETHPTPPQKPATKKPAVNH 212
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1039789998 589 SPTNMTSDTPASSSPPWPVITEVTRPESTiPAGRSLANITSKAQEDS 635
Cdd:PRK11901 213 HKTATVAVPPATSGKPKSGAASARALSSA-PASHYTLQLSSASRSDT 258
|
|
| PHA03132 |
PHA03132 |
thymidine kinase; Provisional |
357-606 |
5.82e-03 |
|
thymidine kinase; Provisional
Pssm-ID: 222997 [Multi-domain] Cd Length: 580 Bit Score: 41.67 E-value: 5.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 357 PQGTLDTPSSSSPPQGTSDTPASSSPpqgTSETPASNSPPqgtSETPGFSSPPQVTTATLvsSSPPQVTSETPASSSPTQ 436
Cdd:PHA03132 21 PEGSRDENFDAERDDFLTPLGSTSEA---TSEDDDDLYPP---RETGSGGGVATSTIYTV--PRPPRGPEQTLDKPDSLP 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 437 VTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPtqvttatlvsssPPQVTSDTPASSSPPqvtSDTPASSSPPqvt 516
Cdd:PHA03132 93 ASRELPPGPTPVPPGGFRGASSPRLGADSTSPRFLYQ------------VNFPVILAPIGESNS---SSEELSEEEE--- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 517 SETPASSSPPQVTSDTSasisppqvISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSdtpASSSPTN-MTS 595
Cdd:PHA03132 155 HSRPPPSESLKVKNGGK--------VYPKGFSKHKTHKRSEFSGLTKKAARKRKGSFVFKPSQLKE---LSGSLKNlLHL 223
|
250
....*....|.
gi 1039789998 596 DTPASSSPPWP 606
Cdd:PHA03132 224 DDSAETDPATR 234
|
|
| CTD |
smart01104 |
Spt5 C-terminal nonapeptide repeat binding Spt4; The C-terminal domain of the transcription ... |
348-465 |
6.21e-03 |
|
Spt5 C-terminal nonapeptide repeat binding Spt4; The C-terminal domain of the transcription elongation factor protein Spt5 is necessary for binding to Spt4 to form the functional complex that regulates early transcription elongation by RNA polymerase II. The complex may be involved in pre-mRNA processing through its association with mRNA capping enzymes. This CTD domain carries a regular nonapeptide repeat that can be present in up to 18 copies, as in S. pombe. The repeat has a characteristic TPA motif.
Pssm-ID: 215026 [Multi-domain] Cd Length: 121 Bit Score: 38.66 E-value: 6.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 348 SDTPA-SSSPPQgtldTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSeTPGFSSPPQVTTATLVSSSPPQVTS 426
Cdd:smart01104 2 GRTPAwGASGSK----TPAWGSRTPGTAAGGAPTARGGSGSRTPAWGGAGSRTP-AWGGAGPTGSRTPAWGGASAWGNKS 76
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1039789998 427 ETPASSSPTQVTSETPASSSP------TQVTSDTPASNSPPQGTS 465
Cdd:smart01104 77 SEGSASSWAAGPGGAYGAPTPgyggtpSAYGPATPGGGAMAGSAS 121
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
347-425 |
6.29e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 41.27 E-value: 6.29e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1039789998 347 TSDTPASSSPPQGTLDTPSSSSPPQGTSDTPASSspPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVT 425
Cdd:PRK13335 89 ASKIEKISQPKQEEQKSLNISATPAPKQEQSQTT--TESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQAQTDMT 165
|
|
| ser_rich_anae_1 |
NF033849 |
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ... |
397-602 |
6.63e-03 |
|
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.
Pssm-ID: 468206 [Multi-domain] Cd Length: 1122 Bit Score: 41.91 E-value: 6.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 397 QGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASS---SPTQVTSET-PASSSPTQVTSDTPA-SNSPPQGTSDTPGFS 471
Cdd:NF033849 247 VGHSTSQGQSHSVGTSESHSVGTSQSQSHTTGHGSTrgwSHTQSTSESeSTGQSSSVGTSESQShGTTEGTSTTDSSSHS 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 472 SPTQVTTATLVSSSpPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSdTSASISppqviSDTPASSSP 551
Cdd:NF033849 327 QSSSYNVSSGTGVS-SSHSDGTSQSTSISHSESSSESTGTSVGHSTSSSVSSSESSSRS-SSSGVS-----GGFSGGIAG 399
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1039789998 552 PQVTSETPASSSPTN---MTSDTPASSSPTNMTS-DTPASSSPTNMTSDTPASSS 602
Cdd:NF033849 400 GGVTSEGLGASQGGSegwGSGDSVQSVSQSYGSSsSTGTSSGHSDSSSHSTSSGQ 454
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
149-447 |
6.81e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 41.76 E-value: 6.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 149 QGASIWRNEFGPGP---------LLPM-KRRGAETERHMIPGNGPPLAMCHQPAPPELFetlcfPIDPASSAPPKATHRM 218
Cdd:PRK07003 329 QIATVGRGELGLAPdeyagftmtLLRMlAFEPAVTGGGAPGGGVPARVAGAVPAPGARA-----AAAVGASAVPAVTAVT 403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 219 TITSLTGRPQVtsdtlASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGT-SDTPASSSPPQVTSATSASSSPPQGTSD 297
Cdd:PRK07003 404 GAAGAALAPKA-----AAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVpAKANARASADSRCDERDAQPPADSGSAS 478
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 298 TPASSSPPQVTSATSasssppqgTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQGTLDTPSSSSPPQGTSDTP 377
Cdd:PRK07003 479 APASDAPPDAAFEPA--------PRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAA 550
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 378 AS-----------SSPPQGTSETPASNSPPQGTSETPgfsSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSS 446
Cdd:PRK07003 551 AAldvlrnagmrvSSDRGARAAAAAKPAAAPAAAPKP---AAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPP 627
|
.
gi 1039789998 447 P 447
Cdd:PRK07003 628 P 628
|
|
| COG5025 |
COG5025 |
Transcription factor of the Forkhead/HNF3 family [Transcription]; |
365-666 |
6.97e-03 |
|
Transcription factor of the Forkhead/HNF3 family [Transcription];
Pssm-ID: 227358 [Multi-domain] Cd Length: 610 Bit Score: 41.33 E-value: 6.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 365 SSSSPPQ--GTSDTPASSSPPQGTSETPASNSPPQGTSET------PGFSSPPQVTTATLVSSSPPQVTSET---PASSS 433
Cdd:COG5025 292 SSVNPSRlaNNKDEGRKGSKSSPVPKDAAPPSTLSDLSADvnrtskPAFSYANSITQAILSSPSGKMTLSEIyswISSNL 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 434 PTQVTSETPASSSPTQVTSDTPASNSPP--QGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSS 511
Cdd:COG5025 372 PYYRHKPTAWQNSIRHNLSLNKSFEKVPrsASQPGKGCFWKIDYSYIYEKESKRNPRSPKKSPSAHSVHQKLSLHVNDLY 451
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 512 PPQVTSEtpASSSPPQVTSdtsasisPPQVISDTPASSS----PPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTpaS 587
Cdd:COG5025 452 QSPATSD--IASSSSQVNS-------QPEFISTQIHSSKgvsnVDLTEQDSQKEASKGNFLDDSGSLSPNTNEINSF--S 520
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 588 SSPTNmtSDTPASSSPPWPVITEVTRPESTIPagRSLANITSKAQEDSPLGVI-STHPQMSFQSSTSQQALDETAGERVP 666
Cdd:COG5025 521 LNTTD--SQQKQSPSHNAPTNNSLNEMASKNS--NSQTQASNSNENVAAVKAIlDASAQMEKPYDLSQAATPTKATESAS 596
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
147-456 |
7.39e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 41.60 E-value: 7.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 147 PPQGASiwrnEFGPGPLLPMKRRGAETER-----------HMIPGNGPPLAMCHQPAP---------PELFETLCFPIDP 206
Cdd:PTZ00449 510 PPEGPE----ASGLPPKAPGDKEGEEGEHedskesdepkeGGKPGETKEGEVGKKPGPakehkpskiPTLSKKPEFPKDP 585
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 207 ASSAPPKATHRmtitslTGRPQVTSDTLASSSP--PQgTSDTPASSSPPQvTSATSASSSPPQgtsdTPASSSPPQVTSA 284
Cdd:PTZ00449 586 KHPKDPEEPKK------PKRPRSAQRPTRPKSPklPE-LLDIPKSPKRPE-SPKSPKRPPPPQ----RPSSPERPEGPKI 653
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 285 TSasssppqgTSDTPASSSPP-------QVTSATSASSSPPQGTSDTPASSSPPQvtSATSASSSPPQGTSDTPASSSPP 357
Cdd:PTZ00449 654 IK--------SPKPPKSPKPPfdpkfkeKFYDDYLDAAAKSKETKTTVVLDESFE--SILKETLPETPGTPFTTPRPLPP 723
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 358 QGTLDtPSSSSPPQGTSDTPaSSSPPQgtsetpaSNSPPQGTS----ETPGFSSPPQVTTATLvssSPPQVTSETPASSS 433
Cdd:PTZ00449 724 KLPRD-EEFPFEPIGDPDAE-QPDDIE-------FFTPPEEERtffhETPADTPLPDILAEEF---KEEDIHAETGEPDE 791
|
330 340
....*....|....*....|...
gi 1039789998 434 PTQvTSETPASSSPTQvTSDTPA 456
Cdd:PTZ00449 792 AMK-RPDSPSEHEDKP-PGDHPS 812
|
|
| COG5099 |
COG5099 |
RNA-binding protein of the Puf family, translational repressor [Translation, ribosomal ... |
477-733 |
7.44e-03 |
|
RNA-binding protein of the Puf family, translational repressor [Translation, ribosomal structure and biogenesis];
Pssm-ID: 227430 [Multi-domain] Cd Length: 777 Bit Score: 41.66 E-value: 7.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 477 TTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSS-PPQVTSE-----TPASSSPPQVTSDTSASISppQVISDTPASSS 550
Cdd:COG5099 23 SPPSSTTSQELMNGNSTPNSFSPIPSKASSSATFTlNLPINNSvnhkiTSSSSSRRKPSGSWSVAIS--SSTSGSQSLLM 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 551 PPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTpASSSPTNMTSDTPASSSPPwpvitevtrpestipagrSLANITSK 630
Cdd:COG5099 101 ELPSSSFNPSTSSRNKSNSALSSTQQGNANSSVT-LSSSTASSMFNSNKLPLPN------------------PNHSNSAT 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 631 AQEDSplgvISTHpqMSFQSSTSQQALDETAGERVPTIPDFQAHSEFQK----ACAILQRLRDFLPTSPTSAQVSVANLL 706
Cdd:COG5099 162 TNQSG----SSFI--NTPASSSSQPLTNLVVSSIKRFPYLTSLSPFFNYlidpSSDSATASADTSPSFNPPPNLSPNNLF 235
|
250 260
....*....|....*....|....*..
gi 1039789998 707 idLSEQLLVLPFQKNNSWSSQTPAVSC 733
Cdd:COG5099 236 --STSDLSPLPDTQSVENNIILNSSSS 260
|
|
| PHA03201 |
PHA03201 |
uracil DNA glycosylase; Provisional |
390-513 |
7.59e-03 |
|
uracil DNA glycosylase; Provisional
Pssm-ID: 165468 Cd Length: 318 Bit Score: 40.65 E-value: 7.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 390 PASNSPPQGTSETPGFSSPPQVTTATlvssspPQVTSETPASssptqvtsetPASSSPTQVTSDTPASNSPPQGtsdtpg 469
Cdd:PHA03201 4 ARSRSPSPPRRPSPPRPTPPRSPDAS------PEETPPSPPG----------PGAEPPPGRAAGPAAPRRRPRG------ 61
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1039789998 470 fssptqvttatlvssSPPQVTSDTPASSSPPQVTSDTPASSSPP 513
Cdd:PHA03201 62 ---------------CPAGVTFSSSAPPRPPLGLDDAPAATPPP 90
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
502-629 |
7.73e-03 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 41.25 E-value: 7.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 502 VTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQV-TSETPASSSPTNmtsdtPASSSPTNM 580
Cdd:PHA03269 18 IIANLNTNIPIPELHTSAATQKPDPAPAPHQAASRAPDPAVAPTSAASRKPDLaQAPTPAASEKFD-----PAPAPHQAA 92
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1039789998 581 TSDTPASSSPTNMTSDTPASSSPPwpvITEVTRPESTIPAGRSLANITS 629
Cdd:PHA03269 93 SRAPDPAVAPQLAAAPKPDAAEAF---TSAAQAHEAPADAGTSAASKKP 138
|
|
| PHA03201 |
PHA03201 |
uracil DNA glycosylase; Provisional |
507-606 |
8.14e-03 |
|
uracil DNA glycosylase; Provisional
Pssm-ID: 165468 Cd Length: 318 Bit Score: 40.65 E-value: 8.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 507 PASSSPPQVTSETPASSSPPQvTSDTSASISPPqvisdtpassSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPA 586
Cdd:PHA03201 4 ARSRSPSPPRRPSPPRPTPPR-SPDASPEETPP----------SPPGPGAEPPPGRAAGPAAPRRRPRGCPAGVTFSSSA 72
|
90 100
....*....|....*....|..
gi 1039789998 587 SSSPTNMTSDTPASSSPP--WP 606
Cdd:PHA03201 73 PPRPPLGLDDAPAATPPPldWT 94
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
228-486 |
8.14e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 41.19 E-value: 8.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 228 QVTSDTLASSSPPQGTSDTPASSSPPQVTSATsasssppqgTSDTPASSSPPQvtsatsasssppqGTSDTPASSSPPQv 307
Cdd:pfam05539 176 KTTSWPTEVSHPTYPSQVTPQSQPATQGHQTA---------TANQRLSSTEPV-------------GTQGTTTSSNPEP- 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 308 tsatsasssppqgtSDTPASSSppqvtsatsasssPPQGTSDTPASSSPpqgtldTPSSSSPPQGTSDTPASSSPP--QG 385
Cdd:pfam05539 233 --------------QTEPPPSQ-------------RGPSGSPQHPPSTT------SQDQSTTGDGQEHTQRRKTPPatSN 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 386 TSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQvTSETPASSSPTQVTSETPASSSPTQVTS-----DTPASNSP 460
Cdd:pfam05539 280 RRSPHSTATPPPTTKRQETGRPTPRPTATTQSGSSPPH-SSPPGVQANPTTQNLVDCKELDPPKPNSicygvGIYNEALP 358
|
250 260
....*....|....*....|....*.
gi 1039789998 461 PQGTSDTPGFSSPTQVTTATLVSSSP 486
Cdd:pfam05539 359 RGCDIVVPLCSTYTIMCMDTYYSKPF 384
|
|
| KLF12_N |
cd21441 |
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as ... |
399-451 |
8.21e-03 |
|
N-terminal domain of Kruppel-like factor 12; Kruppel-like factor 12 (also known as Krueppel-like transcription factor 12, KLF12) regulates, by transcriptionally repressing Nur77 expression, endometrial decidualization, which is a prerequisite for successful implantation and the establishment of pregnancy. It is involved in the maturation processes of kidney collecting ducts after birth, and is able to increase the promoter activity of the UT-A1 urea transporter promoter by binding to the CACCC motif. KLF12 has also been found to promote colorectal cancer growth is also involved in the invasion and apoptosis of basal-like breast carcinoma. KLF12 belongs to a family of proteins called the Specificity Protein (SP)/KLF family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. Although these factors bind to similar elements in vitro, they have distinct activities in vivo depending on their expression profile and the sequence of the N-terminal activation/repression domain, which differ between members. KLF12 contains an N-terminal domain that is related to the N-terminal repression domain of KLF8.
Pssm-ID: 410608 [Multi-domain] Cd Length: 197 Bit Score: 39.99 E-value: 8.21e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 1039789998 399 TSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVT 451
Cdd:cd21441 65 TSPTAVSSSPVSMTASASPSSSSSSSSSSSRPASSPTVITSVSSASSVPTVLT 117
|
|
| CLECT |
smart00034 |
C-type lectin (CTL) or carbohydrate-recognition domain (CRD); Many of these domains function ... |
35-142 |
8.82e-03 |
|
C-type lectin (CTL) or carbohydrate-recognition domain (CRD); Many of these domains function as calcium-dependent carbohydrate binding modules.
Pssm-ID: 214480 [Multi-domain] Cd Length: 124 Bit Score: 38.35 E-value: 8.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 35 GNSCYQLNRLFCDFQEADNYCHAQRGRLA-------HTWnpkLRGFLKSFLNEETVW-------------WVRGNLTLPG 94
Cdd:smart00034 9 GGKCYKFSTEKKTWEDAQAFCQSLGGHLAsihseaeNDF---VASLLKNSGSSDYYWiglsdpdsngswqWSDGSGPVSY 85
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1039789998 95 SHPGINQTggddvlrNQKPGECPSVVTHSNavfsRWNL--CIEKHHFICQ 142
Cdd:smart00034 86 SNWAPGEP-------NNSSGDCVVLSTSGG----KWNDvsCTSKLPFVCE 124
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
370-521 |
9.33e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 41.00 E-value: 9.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 370 PQGTSDTPASssPPQGTSETPASnsppQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSetpASSSPTQ 449
Cdd:PRK07994 361 PAAPLPEPEV--PPQSAAPAASA----QATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLA---ARQQLQR 431
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1039789998 450 VTSDTPASNSPPQGTSDTPgfssPTQVTTATLVSSSP-PQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPA 521
Cdd:PRK07994 432 AQGATKAKKSEPAAASRAR----PVNSALERLASVRPaPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKAL 500
|
|
| PPE |
COG5651 |
PPE-repeat protein [Function unknown]; |
419-631 |
9.45e-03 |
|
PPE-repeat protein [Function unknown];
Pssm-ID: 444372 [Multi-domain] Cd Length: 385 Bit Score: 40.65 E-value: 9.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 419 SSPPQVTSEtPASSSPTQVTSETPASSSP----TQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTP 494
Cdd:COG5651 168 TQPPPTITN-PGGLLGAQNAGSGNTSSNPgfanLGLTGLNQVGIGGLNSGSGPIGLNSGPGNTGFAGTGAAAGAAAAAAA 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 495 ASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPAS 574
Cdd:COG5651 247 AAAAAGAGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAGGGAGAAAATGLGLGAGGAAGAAGATGAGA 326
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1039789998 575 SSPTNMTSDTPASSSPTNMTSDTPASSSPPWPVITEVTRPESTIPAGRSLANITSKA 631
Cdd:COG5651 327 ALGAGAAAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGGGSAGAAAGAASGGGA 383
|
|
| FimV |
COG3170 |
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures]; |
360-516 |
9.54e-03 |
|
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];
Pssm-ID: 442403 [Multi-domain] Cd Length: 508 Bit Score: 40.93 E-value: 9.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 360 TLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTS 439
Cdd:COG3170 202 VLRVPAAEEVAALSPAEARQEVQAQSADWAAYRARLAAAVEPAPAAAAPAAPPAAAAAAGPVPAAAEDTLSPEVTAAAAA 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 440 ETPASS--SPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATL--VSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQV 515
Cdd:COG3170 282 EEADALpeAAAELAERLAALEAQLAELQRLLALKNPAPAAAVSApaAAAAAATVEAAAPAAAAQPAAAAPAPALDNPLLL 361
|
.
gi 1039789998 516 T 516
Cdd:COG3170 362 A 362
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
324-445 |
9.56e-03 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 40.23 E-value: 9.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039789998 324 TPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQGTLDTPSSSSPPQGTSdtPASSSPPQGTSETPAsnsPPQGTSEtP 403
Cdd:PHA02682 85 SPACAAPAPACPACAPAAPAPAVTCPAPAPACPPATAPTCPPPAVCPAPAR--PAPACPPSTRQCPPA---PPLPTPK-P 158
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1039789998 404 GFSSPPQVTTATLvssSPPQVtsetPASSSPTQVTSetPASS 445
Cdd:PHA02682 159 APAAKPIFLHNQL---PPPDY----PAASCPTIETA--PAAS 191
|
|
|