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Conserved domains on  [gi|1370480955|ref|XP_024307769|]
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alpha-tocopherol transfer protein-like isoform X4 [Homo sapiens]

Protein Classification

SEC14 family lipid-binding protein( domain architecture ID 10661175)

SEC14 family lipid-binding protein contains a lipid-binding domain that is found in secretory proteins and in lipid regulated proteins

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CRAL_TRIO_N smart01100
CRAL/TRIO, N-terminal domain;
56-102 1.03e-11

CRAL/TRIO, N-terminal domain;


:

Pssm-ID: 215024  Cd Length: 48  Bit Score: 57.17  E-value: 1.03e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1370480955   56 RDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNY 102
Cdd:smart01100   2 EALEELRELLEKHPDLLPPRLDDAFLLRFLRARKFDVEKAKEMLEKY 48
 
Name Accession Description Interval E-value
CRAL_TRIO_N smart01100
CRAL/TRIO, N-terminal domain;
56-102 1.03e-11

CRAL/TRIO, N-terminal domain;


Pssm-ID: 215024  Cd Length: 48  Bit Score: 57.17  E-value: 1.03e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1370480955   56 RDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNY 102
Cdd:smart01100   2 EALEELRELLEKHPDLLPPRLDDAFLLRFLRARKFDVEKAKEMLEKY 48
CRAL_TRIO_N pfam03765
CRAL/TRIO, N-terminal domain; This all-alpha domain is found to the N-terminus of pfam00650.
 77-101 1.11e-06

CRAL/TRIO, N-terminal domain; This all-alpha domain is found to the N-terminus of pfam00650.


Pssm-ID: 461043  Cd Length: 53  Bit Score: 43.80  E-value: 1.11e-06
                          10        20
                  ....*....|....*....|....*
gi 1370480955  77 DDAFLLRFLRARKFDYDRALQLLVN 101
Cdd:pfam03765  29 DDVCLLRFLRARKWDVEKAIKMLED 53
 
Name Accession Description Interval E-value
CRAL_TRIO_N smart01100
CRAL/TRIO, N-terminal domain;
56-102 1.03e-11

CRAL/TRIO, N-terminal domain;


Pssm-ID: 215024  Cd Length: 48  Bit Score: 57.17  E-value: 1.03e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1370480955   56 RDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNY 102
Cdd:smart01100   2 EALEELRELLEKHPDLLPPRLDDAFLLRFLRARKFDVEKAKEMLEKY 48
CRAL_TRIO_N pfam03765
CRAL/TRIO, N-terminal domain; This all-alpha domain is found to the N-terminus of pfam00650.
 77-101 1.11e-06

CRAL/TRIO, N-terminal domain; This all-alpha domain is found to the N-terminus of pfam00650.


Pssm-ID: 461043  Cd Length: 53  Bit Score: 43.80  E-value: 1.11e-06
                          10        20
                  ....*....|....*....|....*
gi 1370480955  77 DDAFLLRFLRARKFDYDRALQLLVN 101
Cdd:pfam03765  29 DDVCLLRFLRARKWDVEKAIKMLED 53
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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