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Conserved domains on  [gi|1443055416|ref|XP_025878040|]
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prolamin PPROL 17D-like [Oryza sativa Japonica Group]

Protein Classification

alpha-amylase inhibitor/seed storage family protein( domain architecture ID 10083580)

alpha-amylase inhibitors (AAIs) and seed storage (SS) proteins play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses; AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases.

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AAI_SS cd00261
AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of ...
 30-140 1.45e-10

AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins. They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.


:

Pssm-ID: 238163  Cd Length: 110  Bit Score: 55.10  E-value: 1.45e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443055416  30 QYQLQPHLMLQQQMLSPCGEFVRQQCSTVATPFfqspVFQLRNCQVMQQQCCQQLRMIAQQSHCQAISSVQAIVQQLRLQ 109
Cdd:cd00261     1 QQQCQPGQQQPQQPLNSCREYLRQQCSGVGGPP----VWPQQSCEVLRQQCCQQLAQIPEQCRCEALRQMVQGVIQQQQQ 76

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1443055416 110 QFAsvYFDQSQAQAQAMLALNMPSICGIYPS 140
Cdd:cd00261    77 QQE--QQQGQEVERMRQAAQNLPSMCNLYPP 105
 
Name Accession Description Interval E-value
AAI_SS cd00261
AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of ...
 30-140 1.45e-10

AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins. They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.


Pssm-ID: 238163  Cd Length: 110  Bit Score: 55.10  E-value: 1.45e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443055416  30 QYQLQPHLMLQQQMLSPCGEFVRQQCSTVATPFfqspVFQLRNCQVMQQQCCQQLRMIAQQSHCQAISSVQAIVQQLRLQ 109
Cdd:cd00261     1 QQQCQPGQQQPQQPLNSCREYLRQQCSGVGGPP----VWPQQSCEVLRQQCCQQLAQIPEQCRCEALRQMVQGVIQQQQQ 76

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1443055416 110 QFAsvYFDQSQAQAQAMLALNMPSICGIYPS 140
Cdd:cd00261    77 QQE--QQQGQEVERMRQAAQNLPSMCNLYPP 105
Gliadin pfam13016
Cys-rich Gliadin N-terminal; This is a cysteine-rich N-terminal region of gliadin and avenin ...
 32-99 7.72e-08

Cys-rich Gliadin N-terminal; This is a cysteine-rich N-terminal region of gliadin and avenin plant proteins. The exact function is not known.


Pssm-ID: 404039  Cd Length: 75  Bit Score: 46.86  E-value: 7.72e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443055416  32 QLQPHLMLQ--QQMLSPCGEFVRQQCSTVATPFFQSPVFQLRNCQVMQQQCCQQLRMIAQQSHCQAISSV 99
Cdd:pfam13016   1 QQQPSVIQQslQQQLNPCKEFLQQQCSPVTVPFLQSRTLQQSNCQVMQQQCCQQLRQIPEQSRCQAIHNI 70
 
Name Accession Description Interval E-value
AAI_SS cd00261
AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of ...
 30-140 1.45e-10

AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins. They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.


Pssm-ID: 238163  Cd Length: 110  Bit Score: 55.10  E-value: 1.45e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443055416  30 QYQLQPHLMLQQQMLSPCGEFVRQQCSTVATPFfqspVFQLRNCQVMQQQCCQQLRMIAQQSHCQAISSVQAIVQQLRLQ 109
Cdd:cd00261     1 QQQCQPGQQQPQQPLNSCREYLRQQCSGVGGPP----VWPQQSCEVLRQQCCQQLAQIPEQCRCEALRQMVQGVIQQQQQ 76

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1443055416 110 QFAsvYFDQSQAQAQAMLALNMPSICGIYPS 140
Cdd:cd00261    77 QQE--QQQGQEVERMRQAAQNLPSMCNLYPP 105
Gliadin pfam13016
Cys-rich Gliadin N-terminal; This is a cysteine-rich N-terminal region of gliadin and avenin ...
 32-99 7.72e-08

Cys-rich Gliadin N-terminal; This is a cysteine-rich N-terminal region of gliadin and avenin plant proteins. The exact function is not known.


Pssm-ID: 404039  Cd Length: 75  Bit Score: 46.86  E-value: 7.72e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443055416  32 QLQPHLMLQ--QQMLSPCGEFVRQQCSTVATPFFQSPVFQLRNCQVMQQQCCQQLRMIAQQSHCQAISSV 99
Cdd:pfam13016   1 QQQPSVIQQslQQQLNPCKEFLQQQCSPVTVPFLQSRTLQQSNCQVMQQQCCQQLRQIPEQSRCQAIHNI 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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