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Conserved domains on  [gi|1720423807|ref|XP_030098764|]
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zinc finger protein 936 isoform X2 [Mus musculus]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11473154)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940|11179890|12665246|10940247
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
44-388 1.74e-08

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 56.24  E-value: 1.74e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807  44 EYTQWDKAFKYHSHLQKlerNQTGDKNSEVFQHSKVLACQSTLQRNkrtNTGEKPYKPSYLRMHERTHTGEKPYQCNECD 123
Cdd:COG5048   132 SRDPQLPDLLSISNLRN---NPLPGNNSSSVNTPQSNSLHPPLPAN---SLSKDPSSNLSLLISSNVSTSIPSSSENSPL 205

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 124 KAFLQLRYLRLHERRHSGEKPYECNQCGKAFLHLNYLRIHERTHTGEKPYQCNQCGKAFTQRSHLQRHKVVHTGVR---- 199
Cdd:COG5048   206 SSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTASSQSSSPNESDSSsekg 285

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 200 ---PYICNQCNKAYPQQNYLRKHERT--HTGE--KPYIC--NQCNKAFSHQSNLRIHEKTHTGEKPYKCnqcdkafshqs 270
Cdd:COG5048   286 fslPIKSKQCNISFSRSSPLTRHLRSvnHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKE----------- 354

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 271 NLQIHERTHTGEKPYKCNQCDKAFAHLKYLRAHERTHtqekpykcNQCGKAFLYLSCLRVHERTHTGEKP--YKCNQCDK 348
Cdd:COG5048   355 KLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLS--------NSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSK 426

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1720423807 349 AFAHLKYLRAHERIHTQEKPYKCNQCGKAFLLLSCLRVHE 388
Cdd:COG5048   427 SFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLDLSNHGK 466
zf-H2C2_2 pfam13465
Zinc-finger double domain;
384-408 2.75e-04

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 2.75e-04
                          10        20
                  ....*....|....*....|....*
gi 1720423807 384 LRVHERTHTGEKPYKCDQCGKAFTQ 408
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
44-388 1.74e-08

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 56.24  E-value: 1.74e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807  44 EYTQWDKAFKYHSHLQKlerNQTGDKNSEVFQHSKVLACQSTLQRNkrtNTGEKPYKPSYLRMHERTHTGEKPYQCNECD 123
Cdd:COG5048   132 SRDPQLPDLLSISNLRN---NPLPGNNSSSVNTPQSNSLHPPLPAN---SLSKDPSSNLSLLISSNVSTSIPSSSENSPL 205

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 124 KAFLQLRYLRLHERRHSGEKPYECNQCGKAFLHLNYLRIHERTHTGEKPYQCNQCGKAFTQRSHLQRHKVVHTGVR---- 199
Cdd:COG5048   206 SSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTASSQSSSPNESDSSsekg 285

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 200 ---PYICNQCNKAYPQQNYLRKHERT--HTGE--KPYIC--NQCNKAFSHQSNLRIHEKTHTGEKPYKCnqcdkafshqs 270
Cdd:COG5048   286 fslPIKSKQCNISFSRSSPLTRHLRSvnHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKE----------- 354

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 271 NLQIHERTHTGEKPYKCNQCDKAFAHLKYLRAHERTHtqekpykcNQCGKAFLYLSCLRVHERTHTGEKP--YKCNQCDK 348
Cdd:COG5048   355 KLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLS--------NSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSK 426

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1720423807 349 AFAHLKYLRAHERIHTQEKPYKCNQCGKAFLLLSCLRVHE 388
Cdd:COG5048   427 SFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLDLSNHGK 466
zf-H2C2_2 pfam13465
Zinc-finger double domain;
271-296 2.35e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 2.35e-04
                          10        20
                  ....*....|....*....|....*.
gi 1720423807 271 NLQIHERTHTGEKPYKCNQCDKAFAH 296
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
384-408 2.75e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 2.75e-04
                          10        20
                  ....*....|....*....|....*
gi 1720423807 384 LRVHERTHTGEKPYKCDQCGKAFTQ 408
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
44-388 1.74e-08

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 56.24  E-value: 1.74e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807  44 EYTQWDKAFKYHSHLQKlerNQTGDKNSEVFQHSKVLACQSTLQRNkrtNTGEKPYKPSYLRMHERTHTGEKPYQCNECD 123
Cdd:COG5048   132 SRDPQLPDLLSISNLRN---NPLPGNNSSSVNTPQSNSLHPPLPAN---SLSKDPSSNLSLLISSNVSTSIPSSSENSPL 205

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 124 KAFLQLRYLRLHERRHSGEKPYECNQCGKAFLHLNYLRIHERTHTGEKPYQCNQCGKAFTQRSHLQRHKVVHTGVR---- 199
Cdd:COG5048   206 SSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTASSQSSSPNESDSSsekg 285

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 200 ---PYICNQCNKAYPQQNYLRKHERT--HTGE--KPYIC--NQCNKAFSHQSNLRIHEKTHTGEKPYKCnqcdkafshqs 270
Cdd:COG5048   286 fslPIKSKQCNISFSRSSPLTRHLRSvnHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKE----------- 354

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 271 NLQIHERTHTGEKPYKCNQCDKAFAHLKYLRAHERTHtqekpykcNQCGKAFLYLSCLRVHERTHTGEKP--YKCNQCDK 348
Cdd:COG5048   355 KLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLS--------NSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSK 426

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1720423807 349 AFAHLKYLRAHERIHTQEKPYKCNQCGKAFLLLSCLRVHE 388
Cdd:COG5048   427 SFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLDLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
160-415 1.10e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 50.46  E-value: 1.10e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 160 LRIHERTHTGEKPYQCNQCGKAFTQRSHLQRHKVVHTGVRPYICNQCNKAYP------QQNYLRKHERTHTGEKPYICNQ 233
Cdd:COG5048   186 LLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPksllsqSPSSLSSSDSSSSASESPRSSL 265

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 234 CNKAFSHQSNLRIHEKTHTG-EKPYKCNQCDKAFSHQSNLQIHERT--HTGE--KPYKC--NQCDKAFAHLKYLRAHERT 306
Cdd:COG5048   266 PTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRSvnHSGEslKPFSCpySLCGKLFSRNDALKRHILL 345

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 307 HTQEKPYKC--NQCGKAFLYLS--CLRVHERTHTGEKPYK-----CNQCDKAFAHLKYLRAHERIHTQEKPY--KCNQCG 375
Cdd:COG5048   346 HTSISPAKEklLNSSSKFSPLLnnEPPQSLQQYKDLKNDKksetlSNSCIRNFKRDSNLSLHIITHLSFRPYncKNPPCS 425

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1720423807 376 KAFLLLSCLRVHERTHTGEKPYKCDQCGKaFTQRSHLKTH 415
Cdd:COG5048   426 KSFNRHYNLIPHKKIHTNHAPLLCSILKS-FRRDLDLSNH 464
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
143-421 1.58e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 50.08  E-value: 1.58e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 143 KPYECNQCGKAFLHLNYLRIHERTHTGEKPYQCNQ--CGKAFTQRSHLQRHKVVHTGVRPYICNQCNkaYPQQNYLRKHE 220
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSL--PLSNSKASSSS 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 221 RTHTGEKPYICNQC-NKAFSHQSNLRIHEKTHTGEKPYKC---------NQCDKAFSHQSNL---------------QIH 275
Cdd:COG5048   110 LSSSSSNSNDNNLLsSHSLPPSSRDPQLPDLLSISNLRNNplpgnnsssVNTPQSNSLHPPLpanslskdpssnlslLIS 189

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 276 ERTHTGEKPYKCNQCDKAFAHLKYLRAHERTHTQEKPYKCNQCGKAFLYLSclrVHERTHTGEKPYKCNQCDKAFAHLKY 355
Cdd:COG5048   190 SNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSL---LSQSPSSLSSSDSSSSASESPRSSLP 266

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 356 LRAHERIHTQE----------KPYKCNQCGKAFLLLSCLRVHERT--HTGE--KPYKCD--QCGKAFTQRSHLKTHKVIH 419
Cdd:COG5048   267 TASSQSSSPNEsdsssekgfsLPIKSKQCNISFSRSSPLTRHLRSvnHSGEslKPFSCPysLCGKLFSRNDALKRHILLH 346


                  ..
gi 1720423807 420 TG 421
Cdd:COG5048   347 TS 348
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
66-419 1.04e-04

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 44.30  E-value: 1.04e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807  66 TGDKNSEVFQHSKVLACQSTLQ------RNKRT-NTGEKPYKPSYLRMHERTHTGEKPYQCNECDKAFLQLRYLRLHE-- 136
Cdd:COG5048     4 TSSQSSSSNNSVLSSTPKSTLKslsnapRPDSCpNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRhl 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 137 RRHSGEKPYECNQCGKAFLHLNYLRIHERTHTGE-KPYQCNQCGKAFTQRsHLQRHKVVhtgvrpYICNQCNKAYPQQNY 215
Cdd:COG5048    84 RTHHNNPSDLNSKSLPLSNSKASSSSLSSSSSNSnDNNLLSSHSLPPSSR-DPQLPDLL------SISNLRNNPLPGNNS 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 216 LRKHERTHTGEK-PYICNQCNKAFSHQSNLRIHEKTHTGEKPYKCNQCDKAFSHQSNLQIHERTHTGEKPYKCNQCDKAF 294
Cdd:COG5048   157 SSVNTPQSNSLHpPLPANSLSKDPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLS 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 295 AHLKYLR------AHERTHTQEKPYKCNQCGKAFLYLSCLRVHERTHTG-EKPYKCNQCDKAFAHLKYLRAHER--IHTQ 365
Cdd:COG5048   237 PKSLLSQspsslsSSDSSSSASESPRSSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRsvNHSG 316

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 366 E--KPYKC--NQCGKAFLLLSCLRVHERTHTGEKPYKC--DQCGKAFTQRSHLKTHKVIH 419
Cdd:COG5048   317 EslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLLNNEPPQSLQ 376
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 235-336 1.23e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 43.94  E-value: 1.23e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423807 235 NKAFSHQSNLRIHEKTH----TGEKPYKCN--QCDKAFSHQSNLQIHERT-HTGEKPYKCNQCDKafahlkylraHERTH 307
Cdd:COG5189   324 NGKLAHGGERNIDTPSRmlkvKDGKPYKCPveGCNKKYKNQNGLKYHMLHgHQNQKLHENPSPEK----------MNIFS 393

                          90       100
                  ....*....|....*....|....*....
gi 1720423807 308 TQEKPYKCNQCGKAFLYLSCLRVHeRTHT 336
Cdd:COG5189   394 AKDKPYRCEVCDKRYKNLNGLKYH-RKHS 421
zf-H2C2_2 pfam13465
Zinc-finger double domain;
271-296 2.35e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 2.35e-04
                          10        20
                  ....*....|....*....|....*.
gi 1720423807 271 NLQIHERTHTGEKPYKCNQCDKAFAH 296
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
384-408 2.75e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 2.75e-04
                          10        20
                  ....*....|....*....|....*
gi 1720423807 384 LRVHERTHTGEKPYKCDQCGKAFTQ 408
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
243-268 3.51e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 3.51e-04
                          10        20
                  ....*....|....*....|....*.
gi 1720423807 243 NLRIHEKTHTGEKPYKCNQCDKAFSH 268
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
328-352 3.54e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 3.54e-04
                          10        20
                  ....*....|....*....|....*
gi 1720423807 328 LRVHERTHTGEKPYKCNQCDKAFAH 352
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
103-128 4.19e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 4.19e-04
                          10        20
                  ....*....|....*....|....*.
gi 1720423807 103 YLRMHERTHTGEKPYQCNECDKAFLQ 128
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
159-184 6.58e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 6.58e-04
                          10        20
                  ....*....|....*....|....*.
gi 1720423807 159 YLRIHERTHTGEKPYQCNQCGKAFTQ 184
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
299-324 1.96e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 1.96e-03
                          10        20
                  ....*....|....*....|....*.
gi 1720423807 299 YLRAHERTHTQEKPYKCNQCGKAFLY 324
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
355-378 2.60e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 2.60e-03
                          10        20
                  ....*....|....*....|....
gi 1720423807 355 YLRAHERIHTQEKPYKCNQCGKAF 378
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSF 24
zf-H2C2_2 pfam13465
Zinc-finger double domain;
131-156 3.16e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 3.16e-03
                          10        20
                  ....*....|....*....|....*.
gi 1720423807 131 YLRLHERRHSGEKPYECNQCGKAFLH 156
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 113-168 3.27e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 39.70  E-value: 3.27e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720423807 113 GEKPYQCN--ECDKAFLQ---LRYLRLH------------ERRHSG----EKPYECNQCGKAFLHLNYLRIHeRTHT 168
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNqngLKYHMLHghqnqklhenpsPEKMNIfsakDKPYRCEVCDKRYKNLNGLKYH-RKHS 421
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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