|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1254-2063 |
2.42e-27 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 122.09 E-value: 2.42e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1254 ELEIEKSLKHHEDIVDEIECLEKTLLKRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEKR 1333
Cdd:TIGR02168 224 ELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQ 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1334 AQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEinkvvaakdadfqcLNEKKEKLTEELQSLQRDIKAAQhsedh 1413
Cdd:TIGR02168 304 KQILRERLANLERQLEELEAQLEELESKLDELAEELAE--------------LEEKLEELKEELESLEAELEELE----- 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1414 hlQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQAKADLQEALT-LGETEVAEKCSHI 1492
Cdd:TIGR02168 365 --AELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKkLEEAELKELQAEL 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1493 REVKSLLEELSFQKGELNvhisekkTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQK 1572
Cdd:TIGR02168 443 EELEEELEELQEELERLE-------EALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQ 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1573 VV----------------ELEKAqVDVLEEKLELENLQQATQQQRRELERQRQLLERDRRETERVRAESQALQSCVECLS 1636
Cdd:TIGR02168 516 SGlsgilgvlselisvdeGYEAA-IEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREIL 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1637 KEKEDLQGQCESWEKKSSHAQRVLA--------------ATEESNKMEQSNL-------------------GKLELSVRK 1683
Cdd:TIGR02168 595 KNIEGFLGVAKDLVKFDPKLRKALSyllggvlvvddldnALELAKKLRPGYRivtldgdlvrpggvitggsAKTNSSILE 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1684 LRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDlakqdlihttkcqnellneqtQLQEDISKWMA 1763
Cdd:TIGR02168 675 RRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELE---------------------ELSRQISALRK 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1764 RLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKfeagKVTLEQQQRQLEKELTDQKSRLKQLL 1843
Cdd:TIGR02168 734 DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAE----IEELEAQIEQLKEELKALREALDELR 809
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1844 TDVSAAEGRLGTLQEeerRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEaddmRADFSLLRNQFLTERKKAEKQV 1923
Cdd:TIGR02168 810 AELTLLNEEAANLRE---RLESLERRIAATERRLEDLEEQIEELSEDIESLAAE----IEELEELIEELESELEALLNER 882
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1924 AGLKEALKIQRSQLEKnlleqkqenscMQKEMATIELVAQDNHERARRLMKELSQMQQEYLELKKQVANQKD--LERRQM 2001
Cdd:TIGR02168 883 ASLEEALALLRSELEE-----------LSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQErlSEEYSL 951
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 2002 EVSDAMRTLKSEVKD--EIRTSLRNLNQFLPEL-PADLASIlernenlRELESLKENFPFTTKER 2063
Cdd:TIGR02168 952 TLEEAEALENKIEDDeeEARRRLKRLENKIKELgPVNLAAI-------EEYEELKERYDFLTAQK 1009
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1177-1882 |
2.32e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 102.44 E-value: 2.32e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1177 RLEDIMQHLKSKQREERRQ--KA------STQHSEEEVDGLHRDIDDLLQEKKELELEVEELHRTIERHQQRKDFIDGHV 1248
Cdd:TIGR02168 190 RLEDILNELERQLKSLERQaeKAerykelKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKL 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1249 ENLMTEL-----EIEKSLKHHEDIVDEIECLEKTLLKRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQT 1323
Cdd:TIGR02168 270 EELRLEVseleeEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEEL 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1324 ESDAEALEKRAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEELQSLQRD 1403
Cdd:TIGR02168 350 KEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKK 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1404 IKAAQHSEDHhlQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQAKADLQEALTLGET 1483
Cdd:TIGR02168 430 LEEAELKELQ--AELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEG 507
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1484 EVAEKCSHIR---EVKSLLEELSFQKG-----------ELNVHISEKKTQLALIQQEMEKEEKNLQVVLqQLSRHKTELK 1549
Cdd:TIGR02168 508 VKALLKNQSGlsgILGVLSELISVDEGyeaaieaalggRLQAVVVENLNAAKKAIAFLKQNELGRVTFL-PLDSIKGTEI 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1550 NVADILQLETSE-LQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQR-------------------- 1608
Cdd:TIGR02168 587 QGNDREILKNIEgFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGYRivtldgdlvrpggvitggsa 666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1609 ----QLLERdRRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLELSVRKL 1684
Cdd:TIGR02168 667 ktnsSILER-RREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQL 745
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1685 RQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDISKWMAR 1764
Cdd:TIGR02168 746 EERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRER 825
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1765 LESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEA---GKVTLEQQQRQLEKELTDQKSRLKQ 1841
Cdd:TIGR02168 826 LESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAllnERASLEEALALLRSELEELSEELRE 905
|
730 740 750 760
....*....|....*....|....*....|....*....|....*
gi 1720399285 1842 LLTDVSAAEGRLGTLQEE----ERRIEGLERMLSQAKQQLSEREQ 1882
Cdd:TIGR02168 906 LESKRSELRRELEELREKlaqlELRLEGLEVRIDNLQERLSEEYS 950
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1255-1795 |
1.39e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 96.54 E-value: 1.39e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1255 LEIEKSLKHHEDIVDEIECLEKTLLKRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEKRA 1334
Cdd:COG1196 232 LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERR 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1335 QETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEELQSLQRDIKAAQHSEDHH 1414
Cdd:COG1196 312 RELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEA 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1415 LQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQAKADLQEALTLGETEVAEKCSHIRE 1494
Cdd:COG1196 392 LRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1495 VKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEE--KNLQVVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQK 1572
Cdd:COG1196 472 AALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEgvKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNI 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1573 VVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQLLERDRRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKK 1652
Cdd:COG1196 552 VVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAAR 631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1653 SSHAQRVLAAT-----EESNKMEQSNLGKlELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQ 1727
Cdd:COG1196 632 LEAALRRAVTLagrlrEVTLEGEGGSAGG-SLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELA 710
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720399285 1728 DHLDLAKQDLIHTTKCQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQ 1795
Cdd:COG1196 711 EAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
288-944 |
1.96e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 95.77 E-value: 1.96e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 288 EDTEKKISAAQ---TRLSELHHEIET-----AEQKvlRATQEFKQLEEAIQQKKISeaekdLLLKQLSGRLQHLNRLRQE 359
Cdd:COG1196 175 EEAERKLEATEenlERLEDILGELERqleplERQA--EKAERYRELKEELKELEAE-----LLLLKLRELEAELEELEAE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 360 ALDLEIQMEKQRKEIAEKHEEINTVQLATDSLdpkdpkhshmkaqkrgkEQQLDIMNRQYTQLESRLDEILCRIAKETEE 439
Cdd:COG1196 248 LEELEAELEELEAELAELEAELEELRLELEEL-----------------ELELEEAQAEEYELLAELARLEQDIARLEER 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 440 IKDLEQQLTDgqiaanealkkdlegvisglqeylgtikgQATQAQNECRKLQDEKETLLQRLTEVQQEKEELELIAMDAE 519
Cdd:COG1196 311 RRELEERLEE-----------------------------LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELA 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 520 NMRKELAELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAETSQLKQELEKLLRRTQLEQSVLQTELEKERESL 599
Cdd:COG1196 362 EAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEE 441
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 600 RDALGKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQNHLnhvvdglihpEEVAARVDELRKRLKLGAGEmrihs 679
Cdd:COG1196 442 EALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEEL----------AEAAARLLLLLEAEADYEGF----- 506
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 680 PSDVLGKSLADLQKQFSEILAR-SQWEKEEAQVRERKLHEEMALQQEKLANGQEEFRQACERALEARIKF-----DKRQH 753
Cdd:COG1196 507 LEGVKAALLLAGLRGLAGAVAVlIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFlpldkIRARA 586
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 754 NARIQQLENEIHYLQENLKSMEKIQGLTDLQLQEADEEKERILAQLQELEKKKKREDARSQEQFLGLDEELKSLKKAVAA 833
Cdd:COG1196 587 ALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGS 666
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 834 SDKLAAAELTIAKDQLKSLhgtvVRINQERAEELQEAERFSREAMQAAKDLSRAEAEIELLQHLLREREGQFRDEMENAD 913
Cdd:COG1196 667 RRELLAALLEAEAELEELA----ERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELL 742
|
650 660 670
....*....|....*....|....*....|.
gi 1720399285 914 LGAKGANSQLLEIEALNEAMAKQRAEITRLR 944
Cdd:COG1196 743 EEEELLEEEALEELPEPPDLEELERELERLE 773
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
286-968 |
2.03e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 95.89 E-value: 2.03e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 286 QLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLKQLSGRLQHLNRLRQEALDLEI 365
Cdd:TIGR02168 261 ELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELA 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 366 QMEKQRKEIAEKHEEINtvqlatDSLDPKDPKHSHMKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKDLEQ 445
Cdd:TIGR02168 341 ELEEKLEELKEELESLE------AELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLED 414
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 446 QLTDGQIAANEALKKDLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELELIAMDAENMRKEL 525
Cdd:TIGR02168 415 RRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSL 494
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 526 AELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKdaetSQLKQELEKLLRRTQleQSVLQTELEKER---ESLRDA 602
Cdd:TIGR02168 495 ERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVD----EGYEAAIEAALGGRL--QAVVVENLNAAKkaiAFLKQN 568
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 603 -LGKAQSSEEKQ---QENNELRTQLKQLQDDNSLLKKQLKEFQNHLNHVVDGLIHPEEVAARVDELRKRLKLGAGEMRIH 678
Cdd:TIGR02168 569 eLGRVTFLPLDSikgTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGYRIV 648
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 679 SPSDVL---------GKSLADLQKQFSEI-LARSQWEKEEAQVRERKLHEEMALQQEKLANGQEEFRQACERALEARIKF 748
Cdd:TIGR02168 649 TLDGDLvrpggvitgGSAKTNSSILERRReIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQI 728
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 749 -----DKRQHNARIQQLENEIHYLQENLKSMEKIQGLTDLQLQEADEEKERILAQLQELEKKKkredARSQEQFLGLDEE 823
Cdd:TIGR02168 729 salrkDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQI----EQLKEELKALREA 804
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 824 LKSLKKAVAA-SDKLAAAELTIA--KDQLKSLHGTVVRINQERAEELQEAERFSREAMQAAKDLSRAEAEIELLQHLLRE 900
Cdd:TIGR02168 805 LDELRAELTLlNEEAANLRERLEslERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERAS 884
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720399285 901 REGQF---RDEMENADLGAKGANSQLLEIEALNEAMAKQRAEItrlrdvlNLTGAGTKGGIENVLEEIAEL 968
Cdd:TIGR02168 885 LEEALallRSELEELSEELRELESKRSELRRELEELREKLAQL-------ELRLEGLEVRIDNLQERLSEE 948
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
284-894 |
9.59e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 93.46 E-value: 9.59e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 284 DLQLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLKQLSGRLQHLNRLRQEALDL 363
Cdd:COG1196 238 EAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEER 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 364 EIQMEKQRKEIAEKHEEINTvqlatdsldpkdpkhshmkaqkrgkeqqldimnrqytqlesrldeilcRIAKETEEIKDL 443
Cdd:COG1196 318 LEELEEELAELEEELEELEE------------------------------------------------ELEELEEELEEA 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 444 EQQLTDGQIAANEALKKDLEgvisglqeylgtikgQATQAQNECRKLQDEKETLLQRLTEVQQEKEELELIAMDAENMRK 523
Cdd:COG1196 350 EEELEEAEAELAEAEEALLE---------------AEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLE 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 524 ELAELESALQEQhevnaslqqaqgdLSAYETELETQLKLKDAETSQLKQELEKLLRRTQLEQSVLQTELEKERESLRDAL 603
Cdd:COG1196 415 RLERLEEELEEL-------------EEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAE 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 604 GKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQNHLNHVVDGLIHPEEVAARVDELRkrlkLGAGEMRIHSPSDV 683
Cdd:COG1196 482 LLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAA----LAAALQNIVVEDDE 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 684 LGKSLADLQKQ-------FSEILARSQWEKEEAQVRERKLHEEMALQQEKLANGQEEFRQACERALEA-RIKFDKRQHNA 755
Cdd:COG1196 558 VAAAAIEYLKAakagratFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRtLVAARLEAALR 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 756 RIQQLENEIHYLQENLKSMEKIQGLTDLQLQEADEEKERILAQLQELEKKKKREDARSQEQFLGLDEELKSLKKAVAASD 835
Cdd:COG1196 638 RAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERL 717
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720399285 836 KLAAAELTIAKDQLKSLHGTVVRINQERAEELQEAERFSREAM---QAAKDLSRAEAEIELL 894
Cdd:COG1196 718 EEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPdleELERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1601-1938 |
3.57e-18 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 91.92 E-value: 3.57e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1601 RRELERQRQLLERDRRETERVRAesqalqscvecLSKEKEDLQGQCESWEKKSSHAQrvlaateesnkmeqsnLGKLELS 1680
Cdd:COG1196 195 LGELERQLEPLERQAEKAERYRE-----------LKEELKELEAELLLLKLRELEAE----------------LEELEAE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1681 VRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDISK 1760
Cdd:COG1196 248 LEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1761 WMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAGKVTLEQQQRQLEKELTDQKSRLK 1840
Cdd:COG1196 328 LEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1841 QLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDMRADFSLLRNQfLTERKKAE 1920
Cdd:COG1196 408 AEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAA-LAELLEEL 486
|
330
....*....|....*...
gi 1720399285 1921 KQVAGLKEALKIQRSQLE 1938
Cdd:COG1196 487 AEAAARLLLLLEAEADYE 504
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1256-2055 |
9.27e-17 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 87.43 E-value: 9.27e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1256 EIEKSLKHHEDI---VDEIECLEKTLLKRRSELREaDRLLAEAENELACTKEKTKsavekFTDAKRNLLQTESDAEALEK 1332
Cdd:TIGR02169 171 KKEKALEELEEVeenIERLDLIIDEKRQQLERLRR-EREKAERYQALLKEKREYE-----GYELLKEKEALERQKEAIER 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1333 RAQEtalnlvkAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQC-LNEKKEKLTEELQSLQRDIKAAQHSE 1411
Cdd:TIGR02169 245 QLAS-------LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLrVKEKIGELEAEIASLERSIAEKEREL 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1412 DHHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQAKADLQEAltlgetevaekcsh 1491
Cdd:TIGR02169 318 EDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAET-------------- 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1492 IREVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEkNLQVVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQ 1571
Cdd:TIGR02169 384 RDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELA-DLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAA 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1572 KVVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQLLERDRRETERV----RAESQALQSCVECLSKEKEDLQGQCE 1647
Cdd:TIGR02169 463 DLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVeevlKASIQGVHGTVAQLGSVGERYATAIE 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1648 SweKKSSHAQRVLAATEESNK-----MEQSNLGKLE-LSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINS--- 1718
Cdd:TIGR02169 543 V--AAGNRLNNVVVEDDAVAKeaielLKRRKAGRATfLPLNKMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPAFKyvf 620
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1719 ----LQEELDSTQDHLDLAK-------------------QDLIHTTKCQNELLNEQTQLQEDISKWMARLESCQKETETK 1775
Cdd:TIGR02169 621 gdtlVVEDIEAARRLMGKYRmvtlegelfeksgamtggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRI 700
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1776 EQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAgkvtLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGT 1855
Cdd:TIGR02169 701 ENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEE----LEEDLSSLEQEIENVKSELKELEARIEELEEDLHK 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1856 LQEEerrIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDMRADFSLLRNQFLtERKKAEKQVagLKEALKIQRS 1935
Cdd:TIGR02169 777 LEEA---LNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYL-EKEIQELQE--QRIDLKEQIK 850
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1936 QLEKNLLEQKQENSCMQKEMATIELvaqdnheRARRLMKELSQMQQEYLELKKQVanqKDLERRQMEVSDAMRTLKSEVK 2015
Cdd:TIGR02169 851 SIEKEIENLNGKKEELEEELEELEA-------ALRDLESRLGDLKKERDELEAQL---RELERKIEELEAQIEKKRKRLS 920
|
810 820 830 840
....*....|....*....|....*....|....*....|
gi 1720399285 2016 dEIRTSLRNLNQFLPELPADLASILERNENLRELESLKEN 2055
Cdd:TIGR02169 921 -ELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAE 959
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1485-1852 |
1.87e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 86.28 E-value: 1.87e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1485 VAEKCSHIREVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEKnlqvvLQQLSRHKTELKNVADILQLETSELQG 1564
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAER-----YQALLKEKREYEGYELLKEKEALERQK 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1565 LKLQHDQKVVELEKAQVDVLEeklelenlqqatQQQRRELERQRQLLERdrrETERVRAESQALQSCVEclsKEKEDLQG 1644
Cdd:TIGR02169 240 EAIERQLASLEEELEKLTEEI------------SELEKRLEEIEQLLEE---LNKKIKDLGEEEQLRVK---EKIGELEA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1645 QCESWEKKSSHAQRVLAATEESNKMEQSNLGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELD 1724
Cdd:TIGR02169 302 EIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFA 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1725 STQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQ 1804
Cdd:TIGR02169 382 ETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLA 461
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1720399285 1805 KEREREEQKFEAgkvtLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGR 1852
Cdd:TIGR02169 462 ADLSKYEQELYD----LKEEYDRVEKELSKLQRELAEAEAQARASEER 505
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1556-2134 |
4.40e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 84.99 E-value: 4.40e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1556 QLETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQLLERDRRETERVRAESQALQScvecl 1635
Cdd:COG1196 221 ELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA----- 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1636 skEKEDLQGQCESWEKKSSHAQRVLAATEESnkmeqsnLGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEA 1715
Cdd:COG1196 296 --ELARLEQDIARLEERRRELEERLEELEEE-------LAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEA 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1716 INSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESklrldq 1795
Cdd:COG1196 367 LLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEE------ 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1796 qemmfQKLQKEREREEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQ 1875
Cdd:COG1196 441 -----EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALL 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1876 QLSEREQQLMAKSGELLALQKEADDMRADFSLLRNQFLTERKKAEKQVAGLKEALKIQRSQLEKNLLEQKQENScmQKEM 1955
Cdd:COG1196 516 LAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALA--AALA 593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1956 ATIELVAQDNHERARRLMKELSQMQQEYLELKKQVANQKDLERRQMEVSDAMRTLKSEVKDEIRTSLRNLNQFLPELPAD 2035
Cdd:COG1196 594 RGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAA 673
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 2036 LASILERNENLRELESLKENFPFTTKERIFEE--KSNFPQVHIMDEHWRGEALRQRLRRHEDQLKAQLRHCMSKQAEVLI 2113
Cdd:COG1196 674 LLEAEAELEELAERLAEEELELEEALLAEEEEerELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEAL 753
|
570 580
....*....|....*....|....*..
gi 1720399285 2114 KGK------QQTEGTLHSLRRQVDALG 2134
Cdd:COG1196 754 EELpeppdlEELERELERLEREIEALG 780
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1167-1833 |
4.80e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 85.11 E-value: 4.80e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1167 EHHNLENEVSRLEDIMQHLKSKQREERRQKASTQHSEEevdglhrdidDLLQEKKELELEVEELHRTIERHQQRKDFIDG 1246
Cdd:TIGR02168 275 EVSELEEEIEELQKELYALANEISRLEQQKQILRERLA----------NLERQLEELEAQLEELESKLDELAEELAELEE 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1247 HVENLMTELEIEKSLkhHEDIVDEIECLEKTLLKRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESD 1326
Cdd:TIGR02168 345 KLEELKEELESLEAE--LEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQE 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1327 AEALEKRAQETALNLVKA-----EQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKK---EKLTEELQ 1398
Cdd:TIGR02168 423 IEELLKKLEEAELKELQAeleelEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLdslERLQENLE 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1399 SLQRDIKA---AQHSEDHHLQVLRES-----------ETLL------------QAKRAELETLKSQ----------VTSQ 1442
Cdd:TIGR02168 503 GFSEGVKAllkNQSGLSGILGVLSELisvdegyeaaiEAALggrlqavvvenlNAAKKAIAFLKQNelgrvtflplDSIK 582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1443 QQELAVLDSELGHRREELLLLQDSLAQAKADLQEALT--LGETEVAEKC-SHIREVKSLLEELSF--QKGELnVHI---- 1513
Cdd:TIGR02168 583 GTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSylLGGVLVVDDLdNALELAKKLRPGYRIvtLDGDL-VRPggvi 661
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1514 ---SEKKTQLAL-IQQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDVLEEKLE 1589
Cdd:TIGR02168 662 tggSAKTNSSILeRRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAE 741
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1590 LENLQQATQQQRRELERQRQLLERDRRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEES--- 1666
Cdd:TIGR02168 742 VEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEaan 821
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1667 ----NKMEQSNLGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTK 1742
Cdd:TIGR02168 822 lrerLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSE 901
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1743 CQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIREsKLRLDQQEMMfqKLQKEREREEQKfeagkvtLE 1822
Cdd:TIGR02168 902 ELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSE-EYSLTLEEAE--ALENKIEDDEEE-------AR 971
|
730
....*....|.
gi 1720399285 1823 QQQRQLEKELT 1833
Cdd:TIGR02168 972 RRLKRLENKIK 982
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1169-1725 |
7.43e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 84.22 E-value: 7.43e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1169 HNLENEVSRLEDIMQHLKSKQREERRQKASTQHSEEEVDGLHRDIDDLLQEKKELELEVEELHRTIERHQQRKDfidgHV 1248
Cdd:COG1196 232 LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIA----RL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1249 ENLMTELEIEKslkhhEDIVDEIECLEKTLLKRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAE 1328
Cdd:COG1196 308 EERRRELEERL-----EELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELE 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1329 ALEKRAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEELQSLQRDIKAAQ 1408
Cdd:COG1196 383 ELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALL 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1409 HSEDHHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSEL-GHRREELLLLQDSLAQAKADLQEALTLGETEVAE 1487
Cdd:COG1196 463 ELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLeGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEA 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1488 KCS--HIREVKSLLEELSFQKGELNVHISEKKTQLALIQQ---EMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSEL 1562
Cdd:COG1196 543 ALAaaLQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIrarAALAAALARGAIGAAVDLVASDLREADARYYVLGDTL 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1563 QGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQLLERDRRETERVRAESQALQscvECLSKEKEDL 1642
Cdd:COG1196 623 LGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLA---EEELELEEAL 699
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1643 QGQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQlqgkQEAINSLQEE 1722
Cdd:COG1196 700 LAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEEL----ERELERLERE 775
|
...
gi 1720399285 1723 LDS 1725
Cdd:COG1196 776 IEA 778
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1425-2101 |
8.60e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 83.95 E-value: 8.60e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1425 LQAKRAE-LETLKSQVTSQQQELAVLD-SELGHRREELLLLQDSLAQAKADLQEALTLGETEVAEKCSHIREVKSLLEEL 1502
Cdd:TIGR02168 207 RQAEKAErYKELKAELRELELALLVLRlEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEEL 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1503 SFQKGELNVHISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVD 1582
Cdd:TIGR02168 287 QKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAE 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1583 VLEEKLELENLQQATQQQRRELERQRQLLERDRRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKKSSHAQ----- 1657
Cdd:TIGR02168 367 LEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAEleele 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1658 RVLAATEESNKMEQSNLGKLELSVRKLRQELEQLSQDKLALHSEVA---EVQQQLQGKQEAINSLQEELDSTQDHLDLAK 1734
Cdd:TIGR02168 447 EELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDsleRLQENLEGFSEGVKALLKNQSGLSGILGVLS 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1735 Q--------------------DLIHTTKCQNELLNEQTQLQEDISKWM---------ARLESCQKETETKEQQVQQLQDE 1785
Cdd:TIGR02168 527 ElisvdegyeaaieaalggrlQAVVVENLNAAKKAIAFLKQNELGRVTflpldsikgTEIQGNDREILKNIEGFLGVAKD 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1786 IRESKLRL---------------------------------------------------DQQEMMFQKLQKEREREEQKF 1814
Cdd:TIGR02168 607 LVKFDPKLrkalsyllggvlvvddldnalelakklrpgyrivtldgdlvrpggvitggsAKTNSSILERRREIEELEEKI 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1815 EAgkvtLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLAL 1894
Cdd:TIGR02168 687 EE----LEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAE 762
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1895 QKEADDMRADFSLLRNQFLTERKKAEKQVAGLKEALKIQRSQLEK----------NLLEQKQENSCMQKEMATIELVAQD 1964
Cdd:TIGR02168 763 IEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDElraeltllneEAANLRERLESLERRIAATERRLED 842
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1965 NHERARRLMKELSQMQQEYLELKKQVANQKD----LERRQMEVSDAMRTLKSEvKDEIRTSLRNLNQFLPELPADLASIL 2040
Cdd:TIGR02168 843 LEEQIEELSEDIESLAAEIEELEELIEELESeleaLLNERASLEEALALLRSE-LEELSEELRELESKRSELRRELEELR 921
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720399285 2041 ERNENLR-ELESLKENFPfTTKERIFEEKSNFPQVhIMDEHWRGEALRQRLRRHEDQLKAQL 2101
Cdd:TIGR02168 922 EKLAQLElRLEGLEVRID-NLQERLSEEYSLTLEE-AEALENKIEDDEEEARRRLKRLENKI 981
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1682-2022 |
1.68e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 83.06 E-value: 1.68e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1682 RKLRQELEQLSQDKLALH-----SEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQE 1756
Cdd:COG1196 216 RELKEELKELEAELLLLKlreleAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1757 DISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAGKVTLEQQQRQLEKELTDQK 1836
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1837 SRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDMRADfsllrnqfLTER 1916
Cdd:COG1196 376 EAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEA--------LEEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1917 KKAEKQVAGLKEALKIQRSQLEKNLLEQKQEnscmqkemaTIELVAQDNHERARRLMKELSQMQQEYLELKKQVANQKDL 1996
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLEAA---------LAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAG 518
|
330 340
....*....|....*....|....*.
gi 1720399285 1997 ERRQMEVSDAMRTLKSEVKDEIRTSL 2022
Cdd:COG1196 519 LRGLAGAVAVLIGVEAAYEAALEAAL 544
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
105-833 |
3.32e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.03 E-value: 3.32e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 105 QDRQEAFERFSlEEIERLEKDLEKKTVETEELKNKQTKFLEEIKNQDKLNKSLKEEAmlqkqscEELESDLSTKKELLKQ 184
Cdd:TIGR02168 284 EELQKELYALA-NEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEEL-------AELEEKLEELKEELES 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 185 KTVELTRACQKQYELEQelafyKIDAKFEPLNYYPSEYAEIdkypdespyigksryKRNMfatetyivsDAQAVQIRKMV 264
Cdd:TIGR02168 356 LEAELEELEAELEELES-----RLEELEEQLETLRSKVAQL---------------ELQI---------ASLNNEIERLE 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 265 PEGGQLRHEHTpPRVQAPPDLQLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLK 344
Cdd:TIGR02168 407 ARLERLEDRRE-RLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELA 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 345 QLSGRLQHLNRLRQEALDL---EIQMEKQRKEIAEKH------------------------------EEINTVQLATDSL 391
Cdd:TIGR02168 486 QLQARLDSLERLQENLEGFsegVKALLKNQSGLSGILgvlselisvdegyeaaieaalggrlqavvvENLNAAKKAIAFL 565
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 392 DPKDPKHSHMKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKDLEQQL-------TDGQIAANEALKKDLEG 464
Cdd:TIGR02168 566 KQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLlggvlvvDDLDNALELAKKLRPGY 645
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 465 VISGLQEYLGTIKGQATQAQNEcrklqdEKETLLQRLTEVQQEKEELELIAMDAENMRKELAELESALQEqhevnasLQQ 544
Cdd:TIGR02168 646 RIVTLDGDLVRPGGVITGGSAK------TNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEE-------LEE 712
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 545 AQGDLSAYETELETQLKLKDAETSQLKQELEKLLRRTQlEQSVLQTELEKERESLRDALGKAQSS-EEKQQENNELRTQL 623
Cdd:TIGR02168 713 ELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIA-QLSKELTELEAEIEELEERLEEAEEElAEAEAEIEELEAQI 791
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 624 KQLQDDNSLLKKQLKEFQNHLNhvvdglihpeevAARVDELRKRLKLGAGEMRIHSpsdvLGKSLADLQKQF---SEILA 700
Cdd:TIGR02168 792 EQLKEELKALREALDELRAELT------------LLNEEAANLRERLESLERRIAA----TERRLEDLEEQIeelSEDIE 855
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 701 RSQWEKEEAQVRERKLHEEMALQQEKLANGQEEFRQACERALEARikfdkrqhnARIQQLENEIHYLQENLKSMEKIQGL 780
Cdd:TIGR02168 856 SLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELS---------EELRELESKRSELRRELEELREKLAQ 926
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*..
gi 1720399285 781 TDLQLQEADEEKERILAQLQELEKKKKREDARSQE----QFLGLDEELKSLKKAVAA 833
Cdd:TIGR02168 927 LELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENkiedDEEEARRRLKRLENKIKE 983
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1253-1901 |
6.47e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 77.80 E-value: 6.47e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1253 TELEIEKSLKHHEDIVDEIECLEKTLLKRRSELRE-ADRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALE 1331
Cdd:TIGR02169 242 IERQLASLEEELEKLTEEISELEKRLEEIEQLLEElNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAE 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1332 KRAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEELQSLQRDIKAAQHSE 1411
Cdd:TIGR02169 322 ERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREI 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1412 DHHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQAKADL---QEALTLGETEVAEK 1488
Cdd:TIGR02169 402 NELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLskyEQELYDLKEEYDRV 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1489 CSHIREVKSLLEELSFQKGELNVHISEKKTQ-----------LALIQQEMEKEEK-------------NLQVV------- 1537
Cdd:TIGR02169 482 EKELSKLQRELAEAEAQARASEERVRGGRAVeevlkasiqgvHGTVAQLGSVGERyataievaagnrlNNVVVeddavak 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1538 --LQQLSRHKTELKNVADILQLETSELQGLKLQHDQKV------VELEKAQVDVLEEKLELENLQQATQQQRRELERQR- 1608
Cdd:TIGR02169 562 eaIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIgfavdlVEFDPKYEPAFKYVFGDTLVVEDIEAARRLMGKYRm 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1609 -----QLLE---------RDRRETERV----RAESQALQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKME 1670
Cdd:TIGR02169 642 vtlegELFEksgamtggsRAPRGGILFsrsePAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEI 721
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1671 QSNLGKLELSVRKLRQELEQ-------LSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDlihttkc 1743
Cdd:TIGR02169 722 EKEIEQLEQEEEKLKERLEEleedlssLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIP------- 794
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1744 qnELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESklrldQQEMMFQKLQK-EREREEQKFEAGKVTLE 1822
Cdd:TIGR02169 795 --EIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQEL-----QEQRIDLKEQIkSIEKEIENLNGKKEELE 867
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720399285 1823 QQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQeeeRRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDM 1901
Cdd:TIGR02169 868 EELEELEAALRDLESRLGDLKKERDELEAQLRELE---RKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGED 943
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
656-949 |
5.68e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 74.59 E-value: 5.68e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 656 EVAARVDELRKRLKLGAGEMRIHSpsdvlgksLADLQKQFSEILArsqwEKEEAQVRERKLHEEMALQQEKLANGQEEFR 735
Cdd:COG1196 210 EKAERYRELKEELKELEAELLLLK--------LRELEAELEELEA----ELEELEAELEELEAELAELEAELEELRLELE 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 736 QACERALEARIKFdkRQHNARIQQLENEIHYLQENLKSMEKIQGLTDLQLQEADEEKERILAQLQELEKKKKREDARSQE 815
Cdd:COG1196 278 ELELELEEAQAEE--YELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEE 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 816 QFLGLDEELKSLKKAVAASDKLAAAELTIAKDQLKSLHGTVVRINQERAEELQEAERFSREAMQAAKDLSRAEAEIELLQ 895
Cdd:COG1196 356 AEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEE 435
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1720399285 896 HLLREREGQFRDEMENADLGAKGANSQLLEIEALNEAMAKQRAEITRLRDVLNL 949
Cdd:COG1196 436 EEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEA 489
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
285-979 |
8.22e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 74.33 E-value: 8.22e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 285 LQLEDTEKKISAAQTRLSELHHEIETAE--QKVLRATQEFKQLEEAiQQKKISEAEKDLLLKQLSGRLQHLNRLRQEALD 362
Cdd:TIGR02169 184 ENIERLDLIIDEKRQQLERLRREREKAEryQALLKEKREYEGYELL-KEKEALERQKEAIERQLASLEEELEKLTEEISE 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 363 LEIQMEKQRKEIAEKHEEINtvQLATDSLDPKDPKHSHMKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKD 442
Cdd:TIGR02169 263 LEKRLEEIEQLLEELNKKIK--DLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEE 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 443 LEQQLTDGQIaaneaLKKDLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELEliamdaENMR 522
Cdd:TIGR02169 341 LEREIEEERK-----RRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELK------RELD 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 523 KELAELESALQEQHEVNASLQQAQGDLSAYETELET-QLKLKDAET--SQLKQELEKL---LRRTQLEQSVLQTELEKER 596
Cdd:TIGR02169 410 RLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDkALEIKKQEWklEQLAADLSKYeqeLYDLKEEYDRVEKELSKLQ 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 597 ESLRDALGKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQ------------NHLNHVVdglIHPEEVAARVDEL 664
Cdd:TIGR02169 490 RELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGeryataievaagNRLNNVV---VEDDAVAKEAIEL 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 665 RKRLKLGA------GEMR-IHSPSDVLGKS--------LADLQKQF---------SEILARSQWEKEE--AQVRERKLHE 718
Cdd:TIGR02169 567 LKRRKAGRatflplNKMRdERRDLSILSEDgvigfavdLVEFDPKYepafkyvfgDTLVVEDIEAARRlmGKYRMVTLEG 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 719 EMALQQEKLANGQEEFRQACERALEARIKFdkRQHNARIQQLENEIHYLQENLKSMEKIQGLTDLQLQEADEEKERILAQ 798
Cdd:TIGR02169 647 ELFEKSGAMTGGSRAPRGGILFSRSEPAEL--QRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKE 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 799 LQELEkkkkREDARSQEQFLGLDEELKSLKKAVAASD--------KLAAAELTIAKDQLK------SLHGTVVRINQERA 864
Cdd:TIGR02169 725 IEQLE----QEEEKLKERLEELEEDLSSLEQEIENVKselkeleaRIEELEEDLHKLEEAlndleaRLSHSRIPEIQAEL 800
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 865 EELQEAERFSREAMQAA-KDLSRAEAEIELLQHLLREREGQFRDEMENADLGAKGANSQLLEIEALNEAMAKQRAEITRL 943
Cdd:TIGR02169 801 SKLEEEVSRIEARLREIeQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDL 880
|
730 740 750
....*....|....*....|....*....|....*.
gi 1720399285 944 RDVLnltgAGTKGGIENVLEEIAELRHAVSAQNEYI 979
Cdd:TIGR02169 881 ESRL----GDLKKERDELEAQLRELERKIEELEAQI 912
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1177-2016 |
1.04e-12 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 73.93 E-value: 1.04e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1177 RLEDIMQHLKSKQREERRQKASTQhseEEVDGLHRDIDDLLQEKKELELEVEELHRTIERHQQRKDFIDGHVENLMTELE 1256
Cdd:TIGR00606 302 QLNDLYHNHQRTVREKERELVDCQ---RELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLE 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1257 IEkSLKHHEDIVDEIECLEKtlLKRRSELREAdRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEKRAQE 1336
Cdd:TIGR00606 379 LD-GFERGPFSERQIKNFHT--LVIERQEDEA-KTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQE 454
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1337 TALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEinkvvAAKDADFQCLNEKKEKLTEELQSLQRDIKA-AQHSE--DH 1413
Cdd:TIGR00606 455 ELKFVIKELQQLEGSSDRILELDQELRKAERELSK-----AEKNSLTETLKKEVKSLQNEKADLDRKLRKlDQEMEqlNH 529
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1414 HLQVLRESETLLQAKRAELETLKSQVTSQQQELA----------VLDSELGHRREELLLLQDSLAQAKADLQEALTLget 1483
Cdd:TIGR00606 530 HTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTsllgyfpnkkQLEDWLHSKSKEINQTRDRLAKLNKELASLEQN--- 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1484 evaeKCSHIREVKSLLE-ELSFQKGELNVHISE-KKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNVADilqlETSE 1561
Cdd:TIGR00606 607 ----KNHINNELESKEEqLSSYEDKLFDVCGSQdEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTD----ENQS 678
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1562 LQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQ----LLERDRRETERVRAESQALQSCVECLSK 1637
Cdd:TIGR00606 679 CCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDemlgLAPGRQSIIDLKEKEIPELRNKLQKVNR 758
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1638 EKEDLQGQCESWEKKSShaqrVLAATEESNKMEQSNLG---KLELSVRKLRQELEQLSQ--DKLALHSEVAEVQQQLQGK 1712
Cdd:TIGR00606 759 DIQRLKNDIEEQETLLG----TIMPEEESAKVCLTDVTimeRFQMELKDVERKIAQQAAklQGSDLDRTVQQVNQEKQEK 834
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1713 QEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDiskwMARLESCQKETETKEQQVQQLQDEIRESKLR 1792
Cdd:TIGR00606 835 QHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTN----LQRRQQFEEQLVELSTEVQSLIREIKDAKEQ 910
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1793 LDQQEMMFQKLQKEREREEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSaaEGRLGTLQEEERRIEGLermlsq 1872
Cdd:TIGR00606 911 DSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQ--DGKDDYLKQKETELNTV------ 982
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1873 aKQQLSEREQQLMAKSGELLALQKEADDMRADFSLLRNQFltERKKAEKQVAGLKEALKIQRSQL-EKNLLEQKQENSCM 1951
Cdd:TIGR00606 983 -NAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNL--TLRKRENELKEVEEELKQHLKEMgQMQVLQMKQEHQKL 1059
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 1952 QKEMATIelvaQDNHERARRLMKELSQmQQEYLELKKQVANQKDLERRQMEVSDAMRTLKSEVKD 2016
Cdd:TIGR00606 1060 EENIDLI----KRNHVLALGRQKGYEK-EIKHFKKELREPQFRDAEEKYREMMIVMRTTELVNKD 1119
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1250-1813 |
2.27e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 72.84 E-value: 2.27e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1250 NLMTELEI--EKSLKHHEDIVDEIECLEKTLLKRRSELREADRLLAEAENELactKEKTKSAVEKFTDAKRNLLQTESDA 1327
Cdd:pfam15921 296 SIQSQLEIiqEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEEL---EKQLVLANSELTEARTERDQFSQES 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1328 EALEKRAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEELQSLQRDIKAA 1407
Cdd:pfam15921 373 GNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAA 452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1408 QHSEDHHLQvlresetllqakraELETLKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQAKADLQEALTLGETEVAE 1487
Cdd:pfam15921 453 IQGKNESLE--------------KVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAE 518
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1488 KCSHIREVKSLLEELSFQKGELNvHISEKKTQLALIQQEMEKEEKNLQVVLQQLSR-----------------HKTELKN 1550
Cdd:pfam15921 519 ITKLRSRVDLKLQELQHLKNEGD-HLRNVQTECEALKLQMAEKDKVIEILRQQIENmtqlvgqhgrtagamqvEKAQLEK 597
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1551 VADILQLETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQR-QLLErdrrETERVRAESQALQ 1629
Cdd:pfam15921 598 EINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERdQLLN----EVKTSRNELNSLS 673
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1630 SCVECLSKEKEDlqgqceswekksshaqrvlaateESNKMEQSNlGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQL 1709
Cdd:pfam15921 674 EDYEVLKRNFRN-----------------------KSEEMETTT-NKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVA 729
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1710 QGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRES 1789
Cdd:pfam15921 730 MGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANM 809
|
570 580
....*....|....*....|....
gi 1720399285 1790 KLRLDQQEMMFQKLQKEREREEQK 1813
Cdd:pfam15921 810 EVALDKASLQFAECQDIIQRQEQE 833
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
281-946 |
3.64e-12 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 72.18 E-value: 3.64e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 281 APPDLQLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLeeaiqqkkisEAEKDLLLKQLSGRLQHL-NRLRQE 359
Cdd:pfam12128 240 RPEFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQET----------SAELNQLLRTLDDQWKEKrDELNGE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 360 aldleiqMEKQRKEIAEKHEEIntvqlatDSLDPKDPKHSHMKAQKRGKEQQldimnrQYTQLESRLDEILCRIAKETEE 439
Cdd:pfam12128 310 -------LSAADAAVAKDRSEL-------EALEDQHGAFLDADIETAAADQE------QLPSWQSELENLEERLKALTGK 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 440 IKDLEQQLTDGQIAANEALKKDLEGVISGLQEYLGTIKGQATQAQNECRKLQDE-KETLLQRLTEVQQEKEELELIAMDA 518
Cdd:pfam12128 370 HQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESElREQLEAGKLEFNEEEYRLKSRLGEL 449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 519 --------------ENMRKELAELESALQEQHEVNASLQQAQGDLSAYETELETQL-KLKDAE--TSQLKQELEKLLRRT 581
Cdd:pfam12128 450 klrlnqatatpellLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASeALRQASrrLEERQSALDELELQL 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 582 QLEQSVLQTELEKERESLRDALGKAQSSEEKqqenneLRTQLKQLQDDNSlLKKQLKEFQNHLNhvVDGLIHPEEVAARv 661
Cdd:pfam12128 530 FPQAGTLLHFLRKEAPDWEQSIGKVISPELL------HRTDLDPEVWDGS-VGGELNLYGVKLD--LKRIDVPEWAASE- 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 662 DELRKRLklgagemrihspsDVLGKSL---ADLQKQFSEILARSQWEKEEAQVRE---RKLHEEMALQQEKLANGQEEFR 735
Cdd:pfam12128 600 EELRERL-------------DKAEEALqsaREKQAAAEEQLVQANGELEKASREEtfaRTALKNARLDLRRLFDEKQSEK 666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 736 QACERALEARikfdKRQHNARIQQLENEIHYLQENLKSMEKIQgltDLQLQEADEEKeriLAQLQELEKKKKREDARSQE 815
Cdd:pfam12128 667 DKKNKALAER----KDSANERLNSLEAQLKQLDKKHQAWLEEQ---KEQKREARTEK---QAYWQVVEGALDAQLALLKA 736
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 816 QFL----GLDEELKSLKKAVAAS-DKLAAAELTIAK--DQLKSLHGTVVRINQERAEELQ----EAERFSREAMQAAKDL 884
Cdd:pfam12128 737 AIAarrsGAKAELKALETWYKRDlASLGVDPDVIAKlkREIRTLERKIERIAVRRQEVLRyfdwYQETWLQRRPRLATQL 816
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720399285 885 SRAEAEIELLQHLLREREGQFRDEMENADLGAKGANSQLLEieaLNEAMAKQRAEITRLRDV 946
Cdd:pfam12128 817 SNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVR---LSENLRGLRCEMSKLATL 875
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1177-1886 |
4.16e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.02 E-value: 4.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1177 RLEDIMQHLKSKQREERRQKASTQHS-EEEVDGLHRDIDDLLQEKKELEleveelhRTIERHQQRKDFIDGHVENLMTEL 1255
Cdd:TIGR02169 273 LLEELNKKIKDLGEEEQLRVKEKIGElEAEIASLERSIAEKERELEDAE-------ERLAKLEAEIDKLLAEIEELEREI 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1256 EIEKSLKhhEDIVDEIECLEKTLLKRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEKRAQ 1335
Cdd:TIGR02169 346 EEERKRR--DKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELA 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1336 ETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEELQSLQRDIKAAQHSEDHHL 1415
Cdd:TIGR02169 424 DLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASE 503
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1416 QVLRES---ETLLQAKRAELETLKSQVTSQQQELAV-LDSELGHRREELLLLQDSLAQAKADLQEALTLGETEVA--EKC 1489
Cdd:TIGR02169 504 ERVRGGravEEVLKASIQGVHGTVAQLGSVGERYATaIEVAAGNRLNNVVVEDDAVAKEAIELLKRRKAGRATFLplNKM 583
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1490 SHIREVKSLLEELSFQKGELNVHISEKKTQLA--------LIQQEMEKEEKNLQVVlqQLSRHKTELKNVADILQLETSE 1561
Cdd:TIGR02169 584 RDERRDLSILSEDGVIGFAVDLVEFDPKYEPAfkyvfgdtLVVEDIEAARRLMGKY--RMVTLEGELFEKSGAMTGGSRA 661
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1562 LQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQLLERDRRETERVRAESQALQscveclsKEKED 1641
Cdd:TIGR02169 662 PRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLE-------QEEEK 734
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1642 LQGQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLELSVRKLRQELEQLSQDklALHSEVAEVQQQLQGKQEAINSLQE 1721
Cdd:TIGR02169 735 LKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEAR--LSHSRIPEIQAELSKLEEEVSRIEA 812
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1722 ELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLdqqemmfQ 1801
Cdd:TIGR02169 813 RLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRL-------G 885
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1802 KLQKEREREEQKFEAgkvtLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIE---GLERMLSQAKQQLS 1878
Cdd:TIGR02169 886 DLKKERDELEAQLRE----LERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEeipEEELSLEDVQAELQ 961
|
....*...
gi 1720399285 1879 EREQQLMA 1886
Cdd:TIGR02169 962 RVEEEIRA 969
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
5-108 |
4.86e-12 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 67.50 E-value: 4.86e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 5 NLGKIEGLENMCNLQKLNLAGNEIEHI----------------------------PVWFAKKLKSLRVLNLKGNKISSLQ 56
Cdd:cd21340 57 QIEKIENLENLVNLKKLYLGGNRISVVeglenltnleelhienqrlppgekltfdPRSLAALSNSLRVLNISGNNIDSLE 136
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 57 DVSKLKPLQD-----------------------LTSLVLIDNPVVALPHYLQFIIFHLRSLESLEGQPVTTQDRQ 108
Cdd:cd21340 137 PLAPLRNLEQldasnnqisdleelldllsswpsLRELDLTGNPVCKKPKYRDKIILASKSLEVLDGKEITDTERQ 211
|
|
| LRR_9 |
pfam14580 |
Leucine-rich repeat; |
8-126 |
6.43e-12 |
|
Leucine-rich repeat;
Pssm-ID: 405295 [Multi-domain] Cd Length: 175 Bit Score: 65.94 E-value: 6.43e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 8 KIEGLENMCNLQKLNLAGNEIEHIPVWFAKKLKSLRVLNLKGNKISSLQDVSKLKPLQDLTSLVLIDNPVVALPHYLQFI 87
Cdd:pfam14580 56 KLDGFPLLRRLKTLLLNNNRICRIGEGLGEALPNLTELILTNNNLQELGDLDPLASLKKLTFLSLLRNPVTNKPHYRLYV 135
|
90 100 110
....*....|....*....|....*....|....*....
gi 1720399285 88 IFHLRSLESLEGQPVTTQDRQEAFERFSLEEIERLEKDL 126
Cdd:pfam14580 136 IYKVPQLRLLDFRKVKQKERQAAEKMFRSKQGKQLAKEI 174
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1192-2004 |
7.34e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 71.30 E-value: 7.34e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1192 ERRQKASTQHSEEEVDGLHRDIDDLLQEKKELELEVEELHRTIERHQQRKDFIDGHVENLMTELEIEKSLKHH--EDIVD 1269
Cdd:pfam15921 91 QRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDmlEDSNT 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1270 EIECLEKTLLKRRSELREADRLLAEaenelactkektksavekFTDAKRNLLQTESDAEALEKRAQETALNlvkaeqqlr 1349
Cdd:pfam15921 171 QIEQLRKMMLSHEGVLQEIRSILVD------------------FEEASGKKIYEHDSMSTMHFRSLGSAIS--------- 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1350 llqadaedleqhkikqeEILKEINKVVAAKDADFQCLNEKKEKLTEELQSlQRDIKAAQHsEDHHLQVLRESETLLQAKR 1429
Cdd:pfam15921 224 -----------------KILRELDTEISYLKGRIFPVEDQLEALKSESQN-KIELLLQQH-QDRIEQLISEHEVEITGLT 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1430 AELETLKSQVTSQQQELAVLDSELGHRRE----ELLLLQDSLAQAKADLQEALTLGETEVaekcshirevksllEELSFQ 1505
Cdd:pfam15921 285 EKASSARSQANSIQSQLEIIQEQARNQNSmymrQLSDLESTVSQLRSELREAKRMYEDKI--------------EELEKQ 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1506 KGELNVHISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDVLE 1585
Cdd:pfam15921 351 LVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQR 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1586 EKLELENLQQATQQQrreLERQRQLLERDRRETERVRAESQALQSCVECLSKEKEDLQGQ---CESWEKKSSHAQRVLAA 1662
Cdd:pfam15921 431 LEALLKAMKSECQGQ---MERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKkmtLESSERTVSDLTASLQE 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1663 TEESNKMEQSNLGKLELSVRKLRQELEQLSQDKLAL---HSEVAEVQQQLQGKQEAINSLQEELDSTQdhldlakQDLIH 1739
Cdd:pfam15921 508 KERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLrnvQTECEALKLQMAEKDKVIEILRQQIENMT-------QLVGQ 580
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1740 TTKCQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLqdEIRESKLRLDQQEMMFQKLQKEREREEqkfeagkv 1819
Cdd:pfam15921 581 HGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIREL--EARVSDLELEKVKLVNAGSERLRAVKD-------- 650
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1820 tLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEE-ERRIEGLERMLSQAKQQLSEREQQLMAKSGE-------L 1891
Cdd:pfam15921 651 -IKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEmETTTNKLKMQLKSAQSELEQTRNTLKSMEGSdghamkvA 729
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1892 LALQKEADDMRADFSLLRN--QFLTE-RKKAEKQVAGLKEalkiqrsqlEKNLLEQKQENSCMQKEMATIELVAQDNHEr 1968
Cdd:pfam15921 730 MGMQKQITAKRGQIDALQSkiQFLEEaMTNANKEKHFLKE---------EKNKLSQELSTVATEKNKMAGELEVLRSQE- 799
|
810 820 830
....*....|....*....|....*....|....*.
gi 1720399285 1969 aRRLMKELSQMQQEYLELKKQVANQKDLERRQMEVS 2004
Cdd:pfam15921 800 -RRLKEKVANMEVALDKASLQFAECQDIIQRQEQES 834
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
555-1534 |
4.59e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.54 E-value: 4.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 555 ELETQLKL--KDAETSQLKQELEKLLRRTQLEQSVLQ-TELEKERESLRDALGKAQSSEEKQQEN-NELRTQLKQLQDDN 630
Cdd:TIGR02168 197 ELERQLKSleRQAEKAERYKELKAELRELELALLVLRlEELREELEELQEELKEAEEELEELTAElQELEEKLEELRLEV 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 631 SLLKKQL----KEFQNHLNHVVDGLIHPEEVAARVDELRKRLKLGAGEMRIH-SPSDVLGKSLADLQKQFSEILARSQWE 705
Cdd:TIGR02168 277 SELEEEIeelqKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELeSKLDELAEELAELEEKLEELKEELESL 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 706 KEEAQVRERKLhEEMALQQEKLANGQEEFRQAceralEARIKFDKRQHNARIQQLENEIHYLQENLksmekiqgltdlql 785
Cdd:TIGR02168 357 EAELEELEAEL-EELESRLEELEEQLETLRSK-----VAQLELQIASLNNEIERLEARLERLEDRR-------------- 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 786 qeaDEEKERILAQLQELEKKKKREdarSQEQFLGLDEELKSLKKAVAASdklaaaeltiakdqlkslhgtvvrinQERAE 865
Cdd:TIGR02168 417 ---ERLQQEIEELLKKLEEAELKE---LQAELEELEEELEELQEELERL--------------------------EEALE 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 866 ELQEAERFSREAMQAAK-DLSRAEAEIELLQHLLREREGQFRDEMENAD-----LGAKGANSQLLEIEALNEAmakqrae 939
Cdd:TIGR02168 465 ELREELEEAEQALDAAErELAQLQARLDSLERLQENLEGFSEGVKALLKnqsglSGILGVLSELISVDEGYEA------- 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 940 itrlrdvlnltgagtkgGIENVLEEIAE--LRHAVSAQNEYISSMADPfrRQGWWYFMPPAPSSKVSSHSSQATKDSGLG 1017
Cdd:TIGR02168 538 -----------------AIEAALGGRLQavVVENLNAAKKAIAFLKQN--ELGRVTFLPLDSIKGTEIQGNDREILKNIE 598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1018 LKYTASTPLRKPQPGQQeekdssgplPASGYWVYSPIRstlhksfskredADSGGDSQEESGLDDQEEPpFVPPPGYImy 1097
Cdd:TIGR02168 599 GFLGVAKDLVKFDPKLR---------KALSYLLGGVLV------------VDDLDNALELAKKLRPGYR-IVTLDGDL-- 654
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1098 tvlpdgspvpqgvalyapspplpnsshpLTPGTVVYGpppagapiiyGPPPANfAVPLvpagvqhcnipehhNLENEVSR 1177
Cdd:TIGR02168 655 ----------------------------VRPGGVITG----------GSAKTN-SSIL--------------ERRREIEE 681
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1178 LEDIMQHLKSKQRE--ERRQKASTQHS--EEEVDGLHRDIDDLLQEKKELELEVEELHRTIERHQQRKDFIDGHVENLMT 1253
Cdd:TIGR02168 682 LEEKIEELEEKIAEleKALAELRKELEelEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEA 761
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1254 ELE-----IEKSLKHHEDIVDEIECLEKTLLKRRSELREADRLLAEAENELACTKektksavEKFTDAKRNLLQTESDAE 1328
Cdd:TIGR02168 762 EIEeleerLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLN-------EEAANLRERLESLERRIA 834
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1329 ALEKRAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEELQSLQRDIKAAQ 1408
Cdd:TIGR02168 835 ATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELR 914
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1409 HSEDHHLQVLRESETLLQAKRAELETLKSQVTSQQQ-ELAVLDSELGHRREELLLLQDSLAQAKADLQEALTLGETEVAE 1487
Cdd:TIGR02168 915 RELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSlTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEE 994
|
970 980 990 1000
....*....|....*....|....*....|....*....|....*..
gi 1720399285 1488 kcshIREVKSLLEELSFQKGELNvhisEKKTQLALIQQEMEKEEKNL 1534
Cdd:TIGR02168 995 ----YEELKERYDFLTAQKEDLT----EAKETLEEAIEEIDREARER 1033
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
432-808 |
4.59e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.54 E-value: 4.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 432 RIAKETEEIKDLEQQLTDGQIAANEALKK--DLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKE 509
Cdd:TIGR02168 678 EIEELEEKIEELEEKIAELEKALAELRKEleELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELT 757
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 510 ELELIAMDAENMRKEL-AELESALQEQHEVNASLQQAQGDLSAYET---ELETQLKLKDAETSQLKQELEKLLRRTQLEQ 585
Cdd:TIGR02168 758 ELEAEIEELEERLEEAeEELAEAEAEIEELEAQIEQLKEELKALREaldELRAELTLLNEEAANLRERLESLERRIAATE 837
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 586 SVLqTELEKERESLRDALGKAQSSEEKQQEN-NELRTQLKQLQDDNSLLKKQLKEFQNHLNHVVDGLihpEEVAARVDEL 664
Cdd:TIGR02168 838 RRL-EDLEEQIEELSEDIESLAAEIEELEELiEELESELEALLNERASLEEALALLRSELEELSEEL---RELESKRSEL 913
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 665 RKRLKLgagemrihspsdvlgksladLQKQFSEILARsqweKEEAQVRERKLHEEMALQQEKLANGQEEfrqaceraLEA 744
Cdd:TIGR02168 914 RRELEE--------------------LREKLAQLELR----LEGLEVRIDNLQERLSEEYSLTLEEAEA--------LEN 961
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 745 RIKFDKRQHNARIQQLENEIHYLQE-NLKSMEkiqgltdlQLQEADEEKERILAQLQELEKKKKR 808
Cdd:TIGR02168 962 KIEDDEEEARRRLKRLENKIKELGPvNLAAIE--------EYEELKERYDFLTAQKEDLTEAKET 1018
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1538-1879 |
9.17e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 67.77 E-value: 9.17e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1538 LQQLSRHKTELKNVADIL-----QLETSELQGLK-LQHDQKVVELEKAQVDV--------LEEKLELENLQQATQQQRRE 1603
Cdd:TIGR02168 178 ERKLERTRENLDRLEDILnelerQLKSLERQAEKaERYKELKAELRELELALlvlrleelREELEELQEELKEAEEELEE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1604 LERQRQLLERD----RRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLEL 1679
Cdd:TIGR02168 258 LTAELQELEEKleelRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1680 SVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDIS 1759
Cdd:TIGR02168 338 ELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRE 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1760 KWMARLESCQKETETKeqqvqqlqdEIRESKLRLDQQEMMFQKLQKEREREEQKFEagkvTLEQQQRQLEKELTDQKSRL 1839
Cdd:TIGR02168 418 RLQQEIEELLKKLEEA---------ELKELQAELEELEEELEELQEELERLEEALE----ELREELEEAEQALDAAEREL 484
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1720399285 1840 KQLltdvsaaEGRLGTLQEEERRIEGLERMLSQAKQQLSE 1879
Cdd:TIGR02168 485 AQL-------QARLDSLERLQENLEGFSEGVKALLKNQSG 517
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
117-672 |
2.45e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 66.11 E-value: 2.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 117 EEIERLEKDLEKKTVETEELKNKQTKFLEEIKNQDKLNKSLKEEAMLQKQSCEELESDLSTKKELLKQKTVELTRACQKQ 196
Cdd:COG1196 246 AELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEEL 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 197 YELEQELAfyKIDAKFEPLNyypSEYAEIDKypdespyigKSRYKRNMFATETYIVSDAQAVQIRKMVPEGGQLRHEHTP 276
Cdd:COG1196 326 AELEEELE--ELEEELEELE---EELEEAEE---------ELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEA 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 277 PRVQAPPDLQLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLKQLSGRLQHLNRL 356
Cdd:COG1196 392 LRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 357 RQEALDLEIQMEKQRKEIAEKHEEINTVQlATDSLDPKDPKHSHMKAQKRGKEQQLDIM----NRQYTQLESRLDEILCR 432
Cdd:COG1196 472 AALLEAALAELLEELAEAAARLLLLLEAE-ADYEGFLEGVKAALLLAGLRGLAGAVAVLigveAAYEAALEAALAAALQN 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 433 IAKETEEIkdleqqltdgQIAANEALKKDLEGVISGLQeyLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELE 512
Cdd:COG1196 551 IVVEDDEV----------AAAAIEYLKAAKAGRATFLP--LDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVL 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 513 LIAMDAENMRKELAELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAETSQLKQELEKLLRRTQLEQSVLQTEL 592
Cdd:COG1196 619 GDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEA 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 593 EKERESLRDALGKAQSSEEKQQENNELRTQLKQLQDDNsLLKKQLKEFQNHLNHVVDGLIHP---EEVAARVDELRKRLK 669
Cdd:COG1196 699 LLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREE-LLEELLEEEELLEEEALEELPEPpdlEELERELERLEREIE 777
|
....
gi 1720399285 670 -LGA 672
Cdd:COG1196 778 aLGP 781
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1248-2080 |
2.51e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 66.32 E-value: 2.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1248 VENLMTELEIEKSLKHHEDIVDEIECLEKTLLKRRSELREADRLL-AEAENELACTK-----EKTKSAVEKFTDAKRNL- 1320
Cdd:PTZ00121 1029 IEELTEYGNNDDVLKEKDIIDEDIDGNHEGKAEAKAHVGQDEGLKpSYKDFDFDAKEdnradEATEEAFGKAEEAKKTEt 1108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1321 --LQTESDAEALEKRAQET--ALNLVKAEQQLRLLQA-DAEDLEQHKI-KQEEILKEINKVVAAKDADFQCLNEKKEKL- 1393
Cdd:PTZ00121 1109 gkAEEARKAEEAKKKAEDArkAEEARKAEDARKAEEArKAEDAKRVEIaRKAEDARKAEEARKAEDAKKAEAARKAEEVr 1188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1394 -TEELQSLQ--RDIKAAQHSEDhhLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSElgHRREELLLLQDSLAQA 1470
Cdd:PTZ00121 1189 kAEELRKAEdaRKAEAARKAEE--ERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEE--RNNEEIRKFEEARMAH 1264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1471 KADLQEALTLGETEVAEKCSHIREVKSLlEELSFQKGELNVHISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKN 1550
Cdd:PTZ00121 1265 FARRQAAIKAEEARKADELKKAEEKKKA-DEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKK 1343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1551 VADILQLETselqglKLQHDQKVVELEKAQVDVLEEKLELENLQQATQ--QQRRELERQRQLLERDRRETERVRAESQAL 1628
Cdd:PTZ00121 1344 AAEAAKAEA------EAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKkaEEKKKADEAKKKAEEDKKKADELKKAAAAK 1417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1629 QSCVEclSKEKEDLQGQCESWEKKSSHAQRvlaATEESNKMEQSNlgKLELSVRKLRqelEQLSQDKLALHSEVAEVQQQ 1708
Cdd:PTZ00121 1418 KKADE--AKKKAEEKKKADEAKKKAEEAKK---ADEAKKKAEEAK--KAEEAKKKAE---EAKKADEAKKKAEEAKKADE 1487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1709 LQGKQEAINSLQEELDSTQDhldlAKQDLIHTTKCQNELLNEQTQLQEDISKwmarLESCQKETETKEQQVQQLQDEIR- 1787
Cdd:PTZ00121 1488 AKKKAEEAKKKADEAKKAAE----AKKKADEAKKAEEAKKADEAKKAEEAKK----ADEAKKAEEKKKADELKKAEELKk 1559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1788 -ESKLRLDQQEMMFQKLQKEREREEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAAEgRLGTLQEEERRIEGL 1866
Cdd:PTZ00121 1560 aEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAE-ELKKAEEEKKKVEQL 1638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1867 ERMLSQAK---QQLSEREQQLMAKSGELlalQKEADDMRADFSLLRNQFLTERKKAEKQVAGLKEALKIQrsQLEKNLLE 1943
Cdd:PTZ00121 1639 KKKEAEEKkkaEELKKAEEENKIKAAEE---AKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAE--ELKKKEAE 1713
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1944 QKQENSCMQKEMATIELVAQDNHERARRLMKELSQMQQEYLELKKQVANQKDLERRQMEV-SDAMRTLKSEVKDEIRTSL 2022
Cdd:PTZ00121 1714 EKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIrKEKEAVIEEELDEEDEKRR 1793
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*....
gi 1720399285 2023 RNLNQFLPELPADLASILE-RNENLRELESLKENFPFTTKERIFEEKSNFPQVHIMDEH 2080
Cdd:PTZ00121 1794 MEVDKKIKDIFDNFANIIEgGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKH 1852
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1656-1995 |
2.57e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 66.23 E-value: 2.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1656 AQRVLAATEESNKMEQSNLGKLELSVRKLRQELEQlSQDKLALHSEVAEVQQQLQGKQeaINSLQEELDSTQDHLDLAKQ 1735
Cdd:TIGR02168 177 TERKLERTRENLDRLEDILNELERQLKSLERQAEK-AERYKELKAELRELELALLVLR--LEELREELEELQEELKEAEE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1736 DLihttkcqNELLNEQTQLQEDISkwmaRLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFE 1815
Cdd:TIGR02168 254 EL-------EELTAELQELEEKLE----ELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1816 AGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRL----GTLQEEERRIEGLERMLSQAKQ---QLSEREQQLMAKS 1888
Cdd:TIGR02168 323 AQLEELESKLDELAEELAELEEKLEELKEELESLEAELeeleAELEELESRLEELEEQLETLRSkvaQLELQIASLNNEI 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1889 GELLALQKEADDMRADF-----SLLRNQFLTERKKAEKQVAGLKEALKIQRSQLEKnlLEQKQENSCMQKEMATIELV-A 1962
Cdd:TIGR02168 403 ERLEARLERLEDRRERLqqeieELLKKLEEAELKELQAELEELEEELEELQEELER--LEEALEELREELEEAEQALDaA 480
|
330 340 350
....*....|....*....|....*....|...
gi 1720399285 1963 QDNHERARRLMKELSQMQQEYLELKKQVANQKD 1995
Cdd:TIGR02168 481 ERELAQLQARLDSLERLQENLEGFSEGVKALLK 513
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1682-1880 |
3.41e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 64.40 E-value: 3.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1682 RKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDISKW 1761
Cdd:COG4942 30 EQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAEL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1762 MARLESCQKETETK------------------EQQVQQLQDEIREskLRLDQQEMmfQKLQKEREREEQKFEAGKVTLEQ 1823
Cdd:COG4942 110 LRALYRLGRQPPLAlllspedfldavrrlqylKYLAPARREQAEE--LRADLAEL--AALRAELEAERAELEALLAELEE 185
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1720399285 1824 QQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSER 1880
Cdd:COG4942 186 ERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1265-1883 |
4.85e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 65.04 E-value: 4.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1265 EDIVDEIECLEKTLLKRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEKRAQETALNLVKA 1344
Cdd:TIGR04523 36 KQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKND 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1345 EQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEK--------------KEKLTEELQSLQRDIKAA--Q 1408
Cdd:TIGR04523 116 KEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKyndlkkqkeeleneLNLLEKEKLNIQKNIDKIknK 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1409 HSEDHH----LQVLRESETLLQAKRAELE----TLKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQAKADLQEA--- 1477
Cdd:TIGR04523 196 LLKLELllsnLKKKIQKNKSLESQISELKkqnnQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKqke 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1478 LTLGETEVAEKCSHIREVKSLLEELSFQK-----GELNVHISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNva 1552
Cdd:TIGR04523 276 LEQNNKKIKELEKQLNQLKSEISDLNNQKeqdwnKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTN-- 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1553 dilqlETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQLLERDRRETERVRAESQALQSCV 1632
Cdd:TIGR04523 354 -----SESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEI 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1633 ECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLELSVRKLRQELEQLsqdklalhsevaevQQQLQGK 1712
Cdd:TIGR04523 429 ERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQK--------------QKELKSK 494
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1713 QEAINSLQEEldstqdhldlakqdlihttkcQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLR 1792
Cdd:TIGR04523 495 EKELKKLNEE---------------------KKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFE 553
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1793 LDQQEMMFQKLQKEREREEQKFEAGKVTLEQQQ-----RQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLE 1867
Cdd:TIGR04523 554 LKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEkqeliDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSII 633
|
650
....*....|....*.
gi 1720399285 1868 RMLSQAKQQLSEREQQ 1883
Cdd:TIGR04523 634 KNIKSKKNKLKQEVKQ 649
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1769-2006 |
7.35e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 63.24 E-value: 7.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1769 QKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAgkvtLEQQQRQLEKELTDQKSRLKQLLTDVSA 1848
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAA----LARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1849 AEGRLGTLQEEerriegLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDMRAdFSLLRNQFLTERKKAEKQVAGLKE 1928
Cdd:COG4942 95 LRAELEAQKEE------LAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKY-LAPARREQAEELRADLAELAALRA 167
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720399285 1929 ALKIQRSQLEKNLLEQKQENSCMQKEMATIELVAQDNHERARRLMKELSQMQQEYLELKKQVANQKDLERRQMEVSDA 2006
Cdd:COG4942 168 ELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1431-2018 |
9.09e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 63.89 E-value: 9.09e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1431 ELETLKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQAKadlQEALTLGETEVAEKcshiREVKSLLEELSFQKGELN 1510
Cdd:TIGR04523 41 KLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILE---QQIKDLNDKLKKNK----DKINKLNSDLSKINSEIK 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1511 V---HISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDVLEEK 1587
Cdd:TIGR04523 114 NdkeQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIK 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1588 LELENLQQATQQQRRELERQRQLLerdrRETERVRAESQALQSCVECLSKEKEDLQGQCESWEK-----KSSHAQRVLAA 1662
Cdd:TIGR04523 194 NKLLKLELLLSNLKKKIQKNKSLE----SQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTqlnqlKDEQNKIKKQL 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1663 TEESNKMEQSN--LGKLELSVRKLRQELEQLSQDKLALHSEvaEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHT 1740
Cdd:TIGR04523 270 SEKQKELEQNNkkIKELEKQLNQLKSEISDLNNQKEQDWNK--ELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQL 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1741 TKCQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEmmfqKLQKEREREEQKFEAGKVT 1820
Cdd:TIGR04523 348 KKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQE----KLNQQKDEQIKKLQQEKEL 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1821 LEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTL----QEEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQK 1896
Cdd:TIGR04523 424 LEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLdntrESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNE 503
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1897 EADDMRADFSLLR----------NQFLTERKKAEKQVAGL------------KEALKIQRSQLEKNLLEQKQENSCMQKE 1954
Cdd:TIGR04523 504 EKKELEEKVKDLTkkisslkekiEKLESEKKEKESKISDLedelnkddfelkKENLEKEIDEKNKEIEELKQTQKSLKKK 583
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720399285 1955 MATIELVAQDNHERARRLMKELSQMQQEYLELKKQVANQKDLERRQMEVSDAMRTLKSEVKDEI 2018
Cdd:TIGR04523 584 QEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEV 647
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
453-779 |
2.66e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.77 E-value: 2.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 453 AANEALKKdLEGVISGLQEYLGTIKGQATQAQnECRKLQDEKETL-----LQRLTEVQQEKEELELIAMDAENMRKELA- 526
Cdd:TIGR02168 183 RTRENLDR-LEDILNELERQLKSLERQAEKAE-RYKELKAELRELelallVLRLEELREELEELQEELKEAEEELEELTa 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 527 ----------ELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAETSQLKQELEKllrrtqleqsvLQTELEKER 596
Cdd:TIGR02168 261 elqeleekleELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEE-----------LEAQLEELE 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 597 ESLRDALGKAQSSEEKQQennELRTQLKQLQDDNSLLKKQLKEFQNHLNHVVDGLihpEEVAARVDELRKRLKLGAGEMR 676
Cdd:TIGR02168 330 SKLDELAEELAELEEKLE---ELKEELESLEAELEELEAELEELESRLEELEEQL---ETLRSKVAQLELQIASLNNEIE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 677 IhspSDVLGKSLADLQKQFSEILARSQWEKEEAQVRErkLHEEMALQQEKLANGQEEFRQACERALEARIKFDKRQhnAR 756
Cdd:TIGR02168 404 R---LEARLERLEDRRERLQQEIEELLKKLEEAELKE--LQAELEELEEELEELQEELERLEEALEELREELEEAE--QA 476
|
330 340
....*....|....*....|...
gi 1720399285 757 IQQLENEIHYLQENLKSMEKIQG 779
Cdd:TIGR02168 477 LDAAERELAQLQARLDSLERLQE 499
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1279-1879 |
2.66e-09 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 62.68 E-value: 2.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1279 LKRRSELREADRLLAEAENELACTKEKTKS-----AVEKFTDAKRNLLQTESDAEALEKRAQETALNLVKAEQQLRLLQA 1353
Cdd:TIGR00618 256 LKKQQLLKQLRARIEELRAQEAVLEETQERinrarKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVK 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1354 DAEDLEQHKIKQEEILKEinkvvaakdadfqclnEKKEKLTEELQSLQRDIKAAQHSEDHHLQVLRESETLLQAKRAELE 1433
Cdd:TIGR00618 336 QQSSIEEQRRLLQTLHSQ----------------EIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLC 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1434 TLKSQVTSQQQELAVLDSELGHRREELLLL--QDSLAQAKADLQEALTLGETEVAE-KCSHIREVKSLLEELSFQKGELN 1510
Cdd:TIGR00618 400 KELDILQREQATIDTRTSAFRDLQGQLAHAkkQQELQQRYAELCAAAITCTAQCEKlEKIHLQESAQSLKEREQQLQTKE 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1511 VhISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDVLEEKLEL 1590
Cdd:TIGR00618 480 Q-IHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQR 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1591 ENLQQATQQQRRELERQRQLLERDRRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKME 1670
Cdd:TIGR00618 559 ASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCS 638
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1671 QSNLGKL---------------ELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHL----- 1730
Cdd:TIGR00618 639 QELALKLtalhalqltltqervREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIeeydr 718
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1731 -----DLAKQDLIHTTKCQNELLNEQTQLQEDISKWMARL-----ESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMF 1800
Cdd:TIGR00618 719 efneiENASSSLGSDLAAREDALNQSLKELMHQARTVLKArteahFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDT 798
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720399285 1801 QKLQKEREREEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSE 1879
Cdd:TIGR00618 799 HLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQLSDK 877
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1452-1994 |
2.93e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 62.39 E-value: 2.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1452 ELGHRREELlllqDSLAQAKADLQEALTLGETEVAEKCSHIREVKSLLEELSFQKGELnvhiSEKKTQLALIQQEMEKEE 1531
Cdd:PRK03918 173 EIKRRIERL----EKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKL----EKEVKELEELKEEIEELE 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1532 KNLQVVLQQLSRHKTELKNVADILQLETSELQGLKlqhdQKVVELEKAQVDVLEEKLELENLQQaTQQQRRELERQRQLL 1611
Cdd:PRK03918 245 KELESLEGSKRKLEEKIRELEERIEELKKEIEELE----EKVKELKELKEKAEEYIKLSEFYEE-YLDELREIEKRLSRL 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1612 ERDRRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSnlgKLELSVRKLRQELEQL 1691
Cdd:PRK03918 320 EEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKR---LTGLTPEKLEKELEEL 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1692 SQDKLALHSEVAEVQQ---QLQGKQEAINSLQEELDSTQDHLDLAKQDLihTTKCQNELLNEQTQLQEDISKWMARLESC 1768
Cdd:PRK03918 397 EKAKEEIEEEISKITArigELKKEIKELKKAIEELKKAKGKCPVCGREL--TEEHRKELLEEYTAELKRIEKELKEIEEK 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1769 QKETETKEQQVQ-------------QLQDEIR--ESKL------RLDQQEMMFQKLQ-------------KEREREEQKF 1814
Cdd:PRK03918 475 ERKLRKELRELEkvlkkeseliklkELAEQLKelEEKLkkynleELEKKAEEYEKLKekliklkgeikslKKELEKLEEL 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1815 EAGKVTLEQQQRQLEKELTDQKSRLKQL-LTDVSAAEGRLGTL-----------------QEEERRIEGLERMLSQAKQQ 1876
Cdd:PRK03918 555 KKKLAELEKKLDELEEELAELLKELEELgFESVEELEERLKELepfyneylelkdaekelEREEKELKKLEEELDKAFEE 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1877 LSEREQQLMAKSGELLALQKEADDmrADFSLLRNQFLTERKKAEKQVAGLKEaLKIQRSQLEKNLLEQKQENSCMQKEMA 1956
Cdd:PRK03918 635 LAETEKRLEELRKELEELEKKYSE--EEYEELREEYLELSRELAGLRAELEE-LEKRREEIKKTLEKLKEELEEREKAKK 711
|
570 580 590
....*....|....*....|....*....|....*...
gi 1720399285 1957 TIELVaqdnhERARRLMKELSQMQQEYLELKKQVANQK 1994
Cdd:PRK03918 712 ELEKL-----EKALERVEELREKVKKYKALLKERALSK 744
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1278-1652 |
3.72e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.39 E-value: 3.72e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1278 LLKRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEKRAQetalnlvKAEQQLRLLQADAED 1357
Cdd:TIGR02169 676 LQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEE-------KLKERLEELEEDLSS 748
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1358 LEQHKIKQEEILKEINKVVAAKDadfqclnEKKEKLTEELQSLQRDIkaAQHSEDHHLQVLRESETLLQAKRAELETLKS 1437
Cdd:TIGR02169 749 LEQEIENVKSELKELEARIEELE-------EDLHKLEEALNDLEARL--SHSRIPEIQAELSKLEEEVSRIEARLREIEQ 819
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1438 QVTSQQQELAVLDSELGHRREELLLLQDSlaqaKADLQEALTLGETEVAEKCSHIREVKSLLEELSFQKGELNVHISEKK 1517
Cdd:TIGR02169 820 KLNRLTLEKEYLEKEIQELQEQRIDLKEQ----IKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELE 895
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1518 TQLaliqQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSELQGLKLQhDQKVVELEKAQVDVleeklelenlqqat 1597
Cdd:TIGR02169 896 AQL----RELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGE-DEEIPEEELSLEDV-------------- 956
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1720399285 1598 QQQRRELERQRQLLE----RDRRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKK 1652
Cdd:TIGR02169 957 QAELQRVEEEIRALEpvnmLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKK 1015
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
288-832 |
3.74e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 62.00 E-value: 3.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 288 EDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLKQLSGRLQHLNRLRQEALDLEIQM 367
Cdd:PRK03918 189 ENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERI 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 368 EKQRKEIAEKHEEINTVQlatdsldpkdpkhshmkaQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKDLEQQL 447
Cdd:PRK03918 269 EELKKEIEELEEKVKELK------------------ELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERI 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 448 TDGQiaANEALKKDLEGVISGLQEYLGTIKGQAtQAQNECRKLQDEKETLLQRLTEVQQEK--EELELIAMDAENMRKEL 525
Cdd:PRK03918 331 KELE--EKEERLEELKKKLKELEKRLEELEERH-ELYEEAKAKKEELERLKKRLTGLTPEKleKELEELEKAKEEIEEEI 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 526 AELESALQEQHEVNASLQQAQGDLSA---------------YETELETQLKLKDAETSQLKQELEKLLRRTQLEQSVLQT 590
Cdd:PRK03918 408 SKITARIGELKKEIKELKKAIEELKKakgkcpvcgrelteeHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEK 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 591 ELEKERE------------SLRDALGK--AQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQNHLNHVVDGLIHPEE 656
Cdd:PRK03918 488 VLKKESEliklkelaeqlkELEEKLKKynLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDE 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 657 VAARVDELRKRLklgagEMRIHSPSDVLGKSLADLQKQFSEI--LARSQWEKEEAQVRERKLHEEMALQQEKLANGQEEF 734
Cdd:PRK03918 568 LEEELAELLKEL-----EELGFESVEELEERLKELEPFYNEYleLKDAEKELEREEKELKKLEEELDKAFEELAETEKRL 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 735 RQACERALEARIKFDKRQHnariQQLENEIHYLQENLKSMEKiqgltdlQLQEADEEKERILAQLQEL-EKKKKREDARs 813
Cdd:PRK03918 643 EELRKELEELEKKYSEEEY----EELREEYLELSRELAGLRA-------ELEELEKRREEIKKTLEKLkEELEEREKAK- 710
|
570
....*....|....*....
gi 1720399285 814 qeqflgldEELKSLKKAVA 832
Cdd:PRK03918 711 --------KELEKLEKALE 721
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
10-97 |
6.24e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 60.72 E-value: 6.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 10 EGLENMCNLQKLNLAGNEIEHIPVWFAkKLKSLRVLNLKGNKISSLQDVSKLKplqDLTSLVLIDNPVVALPHYLQfiif 89
Cdd:COG4886 199 EPLGNLTNLEELDLSGNQLTDLPEPLA-NLTNLETLDLSNNQLTDLPELGNLT---NLEELDLSNNQLTDLPPLAN---- 270
|
....*...
gi 1720399285 90 hLRSLESL 97
Cdd:COG4886 271 -LTNLKTL 277
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1302-1886 |
7.13e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 61.47 E-value: 7.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1302 TKEKTKSAVEKFTD---AKRNLLQTESDAEALEkRAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEeilkeinkvVAA 1378
Cdd:COG4913 223 TFEAADALVEHFDDlerAHEALEDAREQIELLE-PIRELAERYAAARERLAELEYLRAALRLWFAQRR---------LEL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1379 KDADFQCLNEKKEKLTEELQSLQRDIKAAQHSEDHHLQVLRES--------ETLLQAKRAELETLKSQVTSQQQELAVLD 1450
Cdd:COG4913 293 LEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNggdrleqlEREIERLERELEERERRRARLEALLAALG 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1451 SELGHRREELLLLQDSLAQAKADLQEALTLGETEVAEkcshirevkslleeLSFQKGELNVHISEKKTQLALIQQEMEKE 1530
Cdd:COG4913 373 LPLPASAEEFAALRAEAAALLEALEEELEALEEALAE--------------AEAALRDLRRELRELEAEIASLERRKSNI 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1531 EKNLQVVLQQLSRH----KTELKNVADILQLETSE----------LQGLKL------------------QHDQKVVELEK 1578
Cdd:COG4913 439 PARLLALRDALAEAlgldEAELPFVGELIEVRPEEerwrgaiervLGGFALtllvppehyaaalrwvnrLHLRGRLVYER 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1579 AQVDVLEEKLELENLQQ-----------------------------ATQQQ-------------------------RREL 1604
Cdd:COG4913 519 VRTGLPDPERPRLDPDSlagkldfkphpfrawleaelgrrfdyvcvDSPEElrrhpraitragqvkgngtrhekddRRRI 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1605 ERQRQLLERDRRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEesnkmEQSNLGKLELSVRKL 1684
Cdd:COG4913 599 RSRYVLGFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSW-----DEIDVASAEREIAEL 673
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1685 RQELEQLSQDklalHSEVAEVQQQLQGKQEAINSLQEELDSTQDHldlakqdlihttkcQNELLNEQTQLQEDISKWMAR 1764
Cdd:COG4913 674 EAELERLDAS----SDDLAALEEQLEELEAELEELEEELDELKGE--------------IGRLEKELEQAEEELDELQDR 735
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1765 LESCQKETEtkEQQVQQLQDEIRESKLRLDQQEmMFQKLQKEREREEQKfeagkvtLEQQQRQLEKELTDQKSRLKQLLT 1844
Cdd:COG4913 736 LEAAEDLAR--LELRALLEERFAAALGDAVERE-LRENLEERIDALRAR-------LNRAEEELERAMRAFNREWPAETA 805
|
650 660 670 680
....*....|....*....|....*....|....*....|....
gi 1720399285 1845 DVSAAEGRLGTLQEEERRIE--GLERMLSQAKQQLSEREQQLMA 1886
Cdd:COG4913 806 DLDADLESLPEYLALLDRLEedGLPEYEERFKELLNENSIEFVA 849
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
5-97 |
9.07e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 59.95 E-value: 9.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 5 NLGKIEGLENMCNLQKLNLAGNEIEHIPVWFAkKLKSLRVLNLKGNKISSLQDVskLKPLQDLTSLVLIDNPVVALPHyl 84
Cdd:COG4886 102 DLSGNEELSNLTNLESLDLSGNQLTDLPEELA-NLTNLKELDLSNNQLTDLPEP--LGNLTNLKSLDLSNNQLTDLPE-- 176
|
90
....*....|...
gi 1720399285 85 qfIIFHLRSLESL 97
Cdd:COG4886 177 --ELGNLTNLKEL 187
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1175-2082 |
1.53e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 60.45 E-value: 1.53e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1175 VSRLEDIMQHLKSKQREERRQKASTQHSEEEVDGLHRDIDDLLQEKKELELEVEELHRTIErhQQRKDFIDGHvenlmtE 1254
Cdd:TIGR00606 240 VKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTD--EQLNDLYHNH------Q 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1255 LEIEKSLKHHEDIVDEIECLEKtllkrrsELREADRLLAEAENELACTKEKTKSAVEKFT--DAKRNLLQTESDAEALEK 1332
Cdd:TIGR00606 312 RTVREKERELVDCQRELEKLNK-------ERRLLNQEKTELLVEQGRLQLQADRHQEHIRarDSLIQSLATRLELDGFER 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1333 RA----QETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEELQSLQRDIKAAQ 1408
Cdd:TIGR00606 385 GPfserQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQ 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1409 HSEDHHLQVLRESETLLQAKRaeletlksqvtsqqqELAVLDSElgHRREELLLLQDSLAQAKADLQEALTLGETEVAEK 1488
Cdd:TIGR00606 465 QLEGSSDRILELDQELRKAER---------------ELSKAEKN--SLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQL 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1489 cSHIREVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSELQGLKLQ 1568
Cdd:TIGR00606 528 -NHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQN 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1569 HDQKVVELEKAQVDVLEEKLELENLqQATQQQRRELERQRQLLERDRRETERVRAESQALQSCVECLSKEKEDLQGQCES 1648
Cdd:TIGR00606 607 KNHINNELESKEEQLSSYEDKLFDV-CGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQR 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1649 WEKKSSHAQRVLAATEESNKMEQSNLGKLELSVRKLRQELEQLSqdklalhSEVAEVQQQLQGKQEAINSLQEELDSTQD 1728
Cdd:TIGR00606 686 VFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEML-------GLAPGRQSIIDLKEKEIPELRNKLQKVNR 758
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1729 HLDLAKQDLIHTTKcQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKERE 1808
Cdd:TIGR00606 759 DIQRLKNDIEEQET-LLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHE 837
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1809 REE--QKFEAGKVTLEQQQRQ---LEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSEREQQ 1883
Cdd:TIGR00606 838 LDTvvSKIELNRKLIQDQQEQiqhLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETF 917
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1884 LmaksgellalqkeaDDMRADFSLLRNQFLTERKKAEKQVAGLKEALK---IQRSQLEKNLLEQKqENSCMQKEMATIEL 1960
Cdd:TIGR00606 918 L--------------EKDQQEKEELISSKETSNKKAQDKVNDIKEKVKnihGYMKDIENKIQDGK-DDYLKQKETELNTV 982
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1961 VAQ--DNHERARRLMKELSQMQQEYLELKKQVANQKD---LERRQMEVSDAMRTLKSEVKDEIRTSLRNLNQFLPELPAD 2035
Cdd:TIGR00606 983 NAQleECEKHQEKINEDMRLMRQDIDTQKIQERWLQDnltLRKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEEN 1062
|
890 900 910 920
....*....|....*....|....*....|....*....|....*..
gi 1720399285 2036 LASIlERNENLreleSLKENFPFTTKERIFEEKSNFPQVHIMDEHWR 2082
Cdd:TIGR00606 1063 IDLI-KRNHVL----ALGRQKGYEKEIKHFKKELREPQFRDAEEKYR 1104
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
345-964 |
1.87e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.93 E-value: 1.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 345 QLSGRLQHLNRLRQEALDLEIQMEkQRKEIAEKHEEINtvqlatdsldpkdpkhshmKAQKRGKEQQLDIMNRQYTQLES 424
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREQIE-LLEPIRELAERYA-------------------AARERLAELEYLRAALRLWFAQR 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 425 RLDEILCRIAKETEEIKDLEQQltdgqIAANEALKKDLEGVISGLQEYLGTIKGQA-TQAQNECRKLQDEKETLLQRLTE 503
Cdd:COG4913 289 RLELLEAELEELRAELARLEAE-----LERLEARLDALREELDELEAQIRGNGGDRlEQLEREIERLERELEERERRRAR 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 504 VQQEKEELELiamDAENMRKELAELESALQEQHEvnaSLQQAQGDLSAYETELETQLKLKDAETSQLKQELEKLLRRtql 583
Cdd:COG4913 364 LEALLAALGL---PLPASAEEFAALRAEAAALLE---ALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERR--- 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 584 eQSVLQTELEKERESLRDALGKAQSseekqqennELR--TQLKQLQDDNsllkkqlKEFQNHLNHVVDG----LIHPEE- 656
Cdd:COG4913 435 -KSNIPARLLALRDALAEALGLDEA---------ELPfvGELIEVRPEE-------ERWRGAIERVLGGfaltLLVPPEh 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 657 ---VAARVDELRKRLKLGAGEMRIHSPSDVLGKSLADlqkqfsEILARSQWEKEEAQVR-ERKLHEEMALQQeklANGQE 732
Cdd:COG4913 498 yaaALRWVNRLHLRGRLVYERVRTGLPDPERPRLDPD------SLAGKLDFKPHPFRAWlEAELGRRFDYVC---VDSPE 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 733 EFRQAcERAL--EARIKFDKRQHNARIQQLENEIHYLQENlkSMEKIQGLTDlQLQEADEEKERILAQLQELEKKKKRED 810
Cdd:COG4913 569 ELRRH-PRAItrAGQVKGNGTRHEKDDRRRIRSRYVLGFD--NRAKLAALEA-ELAELEEELAEAEERLEALEAELDALQ 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 811 ARsQEQFLGLDEELKSLKKAVAASDKLAaaELTIAKDQLKSLHGTVVRINQERAEELQEAERFSREAMQAAKDLSRAEAE 890
Cdd:COG4913 645 ER-REALQRLAEYSWDEIDVASAEREIA--ELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKE 721
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720399285 891 IELLQHLLREREGQFRDEMENADLGAKGANSQLLEIEALNEAMAKQRAEITRLRDVLNLTGAGTKGGIENVLEE 964
Cdd:COG4913 722 LEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1758-2055 |
1.93e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 60.07 E-value: 1.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1758 ISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAGK-------VTLEQQQRQLEK 1830
Cdd:TIGR02168 167 ISKYKERRKETERKLERTRENLDRLEDILNELERQLKSLERQAEKAERYKELKAELRELELallvlrlEELREELEELQE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1831 ELTDQKSRLKQLLTDVSAAEGRLGTL----QEEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDMRADFS 1906
Cdd:TIGR02168 247 ELKEAEEELEELTAELQELEEKLEELrlevSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLE 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1907 LLRNQflteRKKAEKQVAGLKEALKiqrsQLEKNLLEQKQENSCMQKEMATIELVAQDNHERARRLMKELSQMQQEYLEL 1986
Cdd:TIGR02168 327 ELESK----LDELAEELAELEEKLE----ELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASL 398
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720399285 1987 KKQVANQKD--------LERRQMEVSDAMRTLKSEVKDEIRTSLRNLNQFLPELPADLASILERNENLRELESLKEN 2055
Cdd:TIGR02168 399 NNEIERLEArlerledrRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQ 475
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
289-916 |
2.03e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.93 E-value: 2.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 289 DTEKKISAAQ---TRLSELHHEIETAEQKVlRATQEFKQLEEAIQQKKISEAEKDLLLKQLsgrlqHLNRLRQEALDLEI 365
Cdd:COG4913 222 DTFEAADALVehfDDLERAHEALEDAREQI-ELLEPIRELAERYAAARERLAELEYLRAAL-----RLWFAQRRLELLEA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 366 QMEKQRKEIAEKHEEINTVQlatdsldpkdpkhshmkAQKRGKEQQLDIMNRQYTQLE-SRLDEILCRIAKETEEIKDLE 444
Cdd:COG4913 296 ELEELRAELARLEAELERLE-----------------ARLDALREELDELEAQIRGNGgDRLEQLEREIERLERELEERE 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 445 QQLTDGQIAAnEALKKDLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELEliamdaenmrKE 524
Cdd:COG4913 359 RRRARLEALL-AALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELE----------AE 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 525 LAELESAlqeQHEVNASLQQAQgdlsayeTELETQLKLKD------AETSQLKQE-------LEKLLR--RTQL--EQSV 587
Cdd:COG4913 428 IASLERR---KSNIPARLLALR-------DALAEALGLDEaelpfvGELIEVRPEeerwrgaIERVLGgfALTLlvPPEH 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 588 LQTELEK-ERESLRdalGKAQSSEEKQQENNELRTQLkqlqDDNSLLKK---QLKEFQNHLNHVvdgLIHPEEVA--ARV 661
Cdd:COG4913 498 YAAALRWvNRLHLR---GRLVYERVRTGLPDPERPRL----DPDSLAGKldfKPHPFRAWLEAE---LGRRFDYVcvDSP 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 662 DELRK-----------RLKLGAGEM--RIHSPSD-VLGKS----LADLQKQfseiLARSQWEKEEAQVRERKLHEEMALQ 723
Cdd:COG4913 568 EELRRhpraitragqvKGNGTRHEKddRRRIRSRyVLGFDnrakLAALEAE----LAELEEELAEAEERLEALEAELDAL 643
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 724 QEKLANgqeefRQACERALEARIkfDKRQHNARIQQLENEihyLQENLKSMEKIQGLTDlQLQEADEEKERILAQLQELE 803
Cdd:COG4913 644 QERREA-----LQRLAEYSWDEI--DVASAEREIAELEAE---LERLDASSDDLAALEE-QLEELEAELEELEEELDELK 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 804 KKKKRedarsqeqflgLDEELKSLKKAV-AASDKLAAAELTIAKDQLKSLhgtvvrinQERAEELQEAERFSREAMQAAK 882
Cdd:COG4913 713 GEIGR-----------LEKELEQAEEELdELQDRLEAAEDLARLELRALL--------EERFAAALGDAVERELRENLEE 773
|
650 660 670
....*....|....*....|....*....|....*.
gi 1720399285 883 DLSRAEAEIELLQHLLREREGQFRDE--MENADLGA 916
Cdd:COG4913 774 RIDALRARLNRAEEELERAMRAFNREwpAETADLDA 809
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1253-2055 |
2.19e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 59.60 E-value: 2.19e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1253 TELEIEKSLKHHEDIVDEIECLEKTLLKRRSELREadRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEK 1332
Cdd:pfam02463 202 LKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNE--ERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEK 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1333 RAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEELQSLQRDIKAAQHSED 1412
Cdd:pfam02463 280 EKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1413 HHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVL-----------DSELGHRREELLLLQDSLAQAKADLQEALTLG 1481
Cdd:pfam02463 360 ELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEElelkseeekeaQLLLELARQLEDLLKEEKKEELEILEEEEESI 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1482 ETEVA--EKCSHIREVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLET 1559
Cdd:pfam02463 440 ELKQGklTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDG 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1560 SELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQLLERDRRETeRVRAESQALQSCVECLSKEK 1639
Cdd:pfam02463 520 VGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGAR-KLRLLIPKLKLPLKSIAVLE 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1640 EDLQGQCESWEKKSSHAQrvlaateESNKMEQSNLGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSL 1719
Cdd:pfam02463 599 IDPILNLAQLDKATLEAD-------EDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSEL 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1720 QEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDISKWMARLEscqkETETKEQQVQQLQDEIRESKLRLDQQEMM 1799
Cdd:pfam02463 672 TKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLE----AEELLADRVQEAQDKINEELKLLKQKIDE 747
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1800 FQKLQKEREREEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLltdvsaaegrlgTLQEEERRIEGLERMLSQAKQQLSE 1879
Cdd:pfam02463 748 EEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEE------------EKEEKLKAQEEELRALEEELKEEAE 815
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1880 REQQLMAKSGELLALQKEADDMRADfsllrnqflterKKAEKQVAGLKEALKIQRSQLEKNLLEQKQENSCMQKEMATIE 1959
Cdd:pfam02463 816 LLEEEQLLIEQEEKIKEEELEELAL------------ELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQK 883
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1960 LVaqDNHERARRLMKELSQMQQEYLELKKQVANQKDLERRQMEVSDAMRTLKSEVKDEIRTSLRNLNQFLPELPADLASI 2039
Cdd:pfam02463 884 LK--DELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEER 961
|
810
....*....|....*.
gi 1720399285 2040 LERNENLRELESLKEN 2055
Cdd:pfam02463 962 NKRLLLAKEELGKVNL 977
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1514-2054 |
2.23e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 59.67 E-value: 2.23e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1514 SEKKTQLALIQQEME-KEEKNLQvvlQQLSRHKTELKNVadilqleTSELQGLKLQHDQKVVELEKAQvdvlEEKLELEN 1592
Cdd:PRK02224 183 SDQRGSLDQLKAQIEeKEEKDLH---ERLNGLESELAEL-------DEEIERYEEQREQARETRDEAD----EVLEEHEE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1593 LQQATQQQRRELERQRQLLERDRRETERVRAESQALQSCVECLSKEKEDLQGQCEsweKKSSHAQRVLAATEESNKMEQS 1672
Cdd:PRK02224 249 RREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAG---LDDADAEAVEARREELEDRDEE 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1673 nlgkLELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKqdlihttkcqnellNEQT 1752
Cdd:PRK02224 326 ----LRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRR--------------EEIE 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1753 QLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAGKV------------- 1819
Cdd:PRK02224 388 ELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKCpecgqpvegsphv 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1820 -TLEQQQRQLEkELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEA 1898
Cdd:PRK02224 468 eTIEEDRERVE-ELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERA 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1899 DDMRADFSLLRNQFLTERKKAEKQVAGLKEalkiqrsqLEKNLLEQKQENSCMQKEMATIELVAqDNHERARRLMKELSQ 1978
Cdd:PRK02224 547 AELEAEAEEKREAAAEAEEEAEEAREEVAE--------LNSKLAELKERIESLERIRTLLAAIA-DAEDEIERLREKREA 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1979 MQQEYLELKKQVANQKDlERRQMEVS---DAMRTLKSEvKDEIRTSLRNLNQFLPELPADLASILER----NENLRELES 2051
Cdd:PRK02224 618 LAELNDERRERLAEKRE-RKRELEAEfdeARIEEARED-KERAEEYLEQVEEKLDELREERDDLQAEigavENELEELEE 695
|
...
gi 1720399285 2052 LKE 2054
Cdd:PRK02224 696 LRE 698
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1607-1841 |
2.84e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 58.24 E-value: 2.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1607 QRQLLERDRRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLELSVRKLRQ 1686
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1687 ELEQLSQdklalhsEVAEVQQQLQgkQEAINSLQEELDSTQDHLDLAKQDLIHttkcqNELLNEQTQLQEDISKWMARLE 1766
Cdd:COG4942 98 ELEAQKE-------ELAELLRALY--RLGRQPPLALLLSPEDFLDAVRRLQYL-----KYLAPARREQAEELRADLAELA 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 1767 SCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQ 1841
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1292-1872 |
2.93e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 59.28 E-value: 2.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1292 LAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEKRAQETALNLVKAEQQLRLLQAD-----------AEDLEQ 1360
Cdd:PRK02224 204 LHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETiaeterereelAEEVRD 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1361 HKIKQEEILKEINKVVAA---KDADFQCLNEKKEKLTEELQSLQRDIkaaqhsEDHHLQVLRESETLlQAKRAELETLKS 1437
Cdd:PRK02224 284 LRERLEELEEERDDLLAEaglDDADAEAVEARREELEDRDEELRDRL------EECRVAAQAHNEEA-ESLREDADDLEE 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1438 QVTSQQQELAVLDSELGHRREELlllqDSLAQAKADLQEALTLGETEVAEKCSHIREVKSLLEELSFQKGELNVHISEKK 1517
Cdd:PRK02224 357 RAEELREEAAELESELEEAREAV----EDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1518 TQLALIQQEMEKEEKnlqvvLQQLSRHKTELKNVADILQLETSElqglklQHDQKVVELE------KAQVDVLEEKLELE 1591
Cdd:PRK02224 433 ATLRTARERVEEAEA-----LLEAGKCPECGQPVEGSPHVETIE------EDRERVEELEaeledlEEEVEEVEERLERA 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1592 NLQQATQQQRRELERQRQLLErDRRETERVRAESQALQscVECLSKEKEDLQGQCESWEKKSSHAqrvlaatEESNKMEQ 1671
Cdd:PRK02224 502 EDLVEAEDRIERLEERREDLE-ELIAERRETIEEKRER--AEELRERAAELEAEAEEKREAAAEA-------EEEAEEAR 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1672 SNLGKLELSVRKLRQELEQLsqDKLA-LHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDlakqdlihttkcqnELLNE 1750
Cdd:PRK02224 572 EEVAELNSKLAELKERIESL--ERIRtLLAAIADAEDEIERLREKREALAELNDERRERLA--------------EKRER 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1751 QTQLQEDISKwmARLESCQKETETKEQQVQQLQDEIREsklrldqqemmfqklqKEREREEQKFEAGKVTLEQQQ----R 1826
Cdd:PRK02224 636 KRELEAEFDE--ARIEEAREDKERAEEYLEQVEEKLDE----------------LREERDDLQAEIGAVENELEEleelR 697
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 1720399285 1827 QLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEE--ERRIEGLERMLSQ 1872
Cdd:PRK02224 698 ERREALENRVEALEALYDEAEELESMYGDLRAElrQRNVETLERMLNE 745
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
449-946 |
3.22e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 59.28 E-value: 3.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 449 DGQIAANEAlkKDLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELELIAMDAENMRKELAEL 528
Cdd:PRK02224 193 KAQIEEKEE--KDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAET 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 529 ESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAETSQLKQELEKL------LRRTQLEQSVLQTELEKERESLRDA 602
Cdd:PRK02224 271 EREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELedrdeeLRDRLEECRVAAQAHNEEAESLRED 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 603 LGKAQS-SEEKQQENNEL-------RTQLKQLQDDNSLLKKQLKEFQNHLNHVVDGL----IHPEEVAARVDELRKRLK- 669
Cdd:PRK02224 351 ADDLEErAEELREEAAELeseleeaREAVEDRREEIEELEEEIEELRERFGDAPVDLgnaeDFLEELREERDELREREAe 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 670 ----LGAGEMRIHSPSDVL--------GKSLADlqkqfSEILARSQWEKEEAQVRERKLhEEMALQQEKLANGQEEFRQA 737
Cdd:PRK02224 431 leatLRTARERVEEAEALLeagkcpecGQPVEG-----SPHVETIEEDRERVEELEAEL-EDLEEEVEEVEERLERAEDL 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 738 CERALEARIKFDKRQH-NARIQQLENEIHYLQENLKSMEKiqgltDLQLQEADEEKERILAQLQELEKKKKREDARSQEQ 816
Cdd:PRK02224 505 VEAEDRIERLEERREDlEELIAERRETIEEKRERAEELRE-----RAAELEAEAEEKREAAAEAEEEAEEAREEVAELNS 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 817 FLG-LDEELKSLKKAVAASDKLAAAELTIakDQLKSLHGTVVRINQERAEELQE--------AERFSREAMQAAK-DLSR 886
Cdd:PRK02224 580 KLAeLKERIESLERIRTLLAAIADAEDEI--ERLREKREALAELNDERRERLAEkrerkrelEAEFDEARIEEAReDKER 657
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 887 AEAEIELLQHLLREREGQfRDEMENAdlgAKGANSQLLEIEALNEAMAKQRAEITRLRDV 946
Cdd:PRK02224 658 AEEYLEQVEEKLDELREE-RDDLQAE---IGAVENELEELEELRERREALENRVEALEAL 713
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
469-972 |
3.65e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 58.92 E-value: 3.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 469 LQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELELIAMDAENMRKELAELESALQEQHEVNASLQQAQGD 548
Cdd:PRK03918 191 IEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 549 LSAYETELETQLK-LKDAETSQLK-QELEKLLRRTQLEQSVLQTELEKERESLRDALGKAQSSEEKQQENNELRTQLKQL 626
Cdd:PRK03918 271 LKKEIEELEEKVKeLKELKEKAEEyIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKEL 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 627 QDDNSLLKKQLKEFQNHLNHVVD--------GLIHPEEVAARVDELRKR--------LKLGAGEMRIHSPSDVLGKSLAD 690
Cdd:PRK03918 351 EKRLEELEERHELYEEAKAKKEElerlkkrlTGLTPEKLEKELEELEKAkeeieeeiSKITARIGELKKEIKELKKAIEE 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 691 LQKQFSEI-LARSQWEKEEAQVRERKLHEEMALQQEKLANGQEEFRQACERALEARIKFDKRQHNARIQQLENEIHYLQE 769
Cdd:PRK03918 431 LKKAKGKCpVCGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEE 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 770 NLKSME-----------------------KIQGLTD--LQLQEADEEKERILAQLQELEKKK----KREDARSQEQFLGL 820
Cdd:PRK03918 511 KLKKYNleelekkaeeyeklkekliklkgEIKSLKKelEKLEELKKKLAELEKKLDELEEELaellKELEELGFESVEEL 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 821 DEELKSLKKAVAASDKL--AAAELTIAKDQLKSLHGTVVRINQERAEELQEAERFSREAMQAAKDLSRAEAEiellqhLL 898
Cdd:PRK03918 591 EERLKELEPFYNEYLELkdAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYE------EL 664
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720399285 899 REREGQFRDEMENADLGAKGANSQLLEIEALNEAMAKQRAEITRLRDVLNLtgagtkggIENVLEEIAELRHAV 972
Cdd:PRK03918 665 REEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEK--------LEKALERVEELREKV 730
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
10-97 |
3.75e-08 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 58.02 E-value: 3.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 10 EGLENMCNLQKLNLAGNEIEHIPVWFAkKLKSLRVLNLKGNKISSLQDVskLKPLQDLTSLVLIDNPVVALPHylqfiIF 89
Cdd:COG4886 176 EELGNLTNLKELDLSNNQITDLPEPLG-NLTNLEELDLSGNQLTDLPEP--LANLTNLETLDLSNNQLTDLPE-----LG 247
|
....*...
gi 1720399285 90 HLRSLESL 97
Cdd:COG4886 248 NLTNLEEL 255
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1276-1981 |
3.84e-08 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 58.83 E-value: 3.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1276 KTLLKRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEKRAQETALNLVKAEQQLRLLQADA 1355
Cdd:TIGR00618 190 KSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARI 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1356 EDLEQHKIKQEEILKEIN------KVVAAKDADFQC----------LNEKKEKLTEELQSLQRDIKAAQ----------- 1408
Cdd:TIGR00618 270 EELRAQEAVLEETQERINrarkaaPLAAHIKAVTQIeqqaqrihteLQSKMRSRAKLLMKRAAHVKQQSsieeqrrllqt 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1409 -HSEDHHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQAKADLQEALTLGETEVAE 1487
Cdd:TIGR00618 350 lHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHA 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1488 KCSHIREVKSLLEELSFQKGELNVHISEKKTQLALIQ--QEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSELQGL 1565
Cdd:TIGR00618 430 KKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQslKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGS 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1566 KLQHDQKVVELEKAQVD---VLEEKLELENLQQATQQQRRELERQRQLLERDRRETERVRAESQALQSCVECLSKEKEDL 1642
Cdd:TIGR00618 510 CIHPNPARQDIDNPGPLtrrMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNL 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1643 QGQceswekksshAQRVLAATEESNKMEQSNLGKLELSVRKLrqeleQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEE 1722
Cdd:TIGR00618 590 QNI----------TVRLQDLTEKLSEAEDMLACEQHALLRKL-----QPEQDLQDVRLHLQQCSQELALKLTALHALQLT 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1723 LDSTQDHLDLAKqdlihtTKCQNELLNEQTQLQEDiskwmarlescqkETETKEQQVQQLQDEIRESKLRLDQQEMMFQK 1802
Cdd:TIGR00618 655 LTQERVREHALS------IRVLPKELLASRQLALQ-------------KMQSEKEQLTYWKEMLAQCQTLLRELETHIEE 715
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1803 LQKEREREEQKFEAGKVTLEQQ----QRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLS 1878
Cdd:TIGR00618 716 YDREFNEIENASSSLGSDLAARedalNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLRE 795
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1879 EREQQLMAKSGEllaLQKEADDMRADFSLLRNQFLTERKKAEKQVAGLKEALKIQRSQLEKNLLEQKQENSCMQKEMATI 1958
Cdd:TIGR00618 796 EDTHLLKTLEAE---IGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKII 872
|
730 740
....*....|....*....|...
gi 1720399285 1959 ELVAQDNHERARRLMKELSQMQQ 1981
Cdd:TIGR00618 873 QLSDKLNGINQIKIQFDGDALIK 895
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
252-940 |
5.54e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 58.61 E-value: 5.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 252 VSDAQAVQIRKMVPEGGQLRHEHTPPRVQAPPDLQLEDTEKKISAAQtRLSELHHEIETAEQKVLRATQEFKQLEEAiqQ 331
Cdd:PTZ00121 1160 AEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAAR-KAEEERKAEEARKAEDAKKAEAVKKAEEA--K 1236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 332 KKISEAEK-------DLLLKQLSGRLQHLNRlRQEALDLEiqmEKQRKEIAEKHEEINTVQLATDSLDPKDPKHSHMKAQ 404
Cdd:PTZ00121 1237 KDAEEAKKaeeernnEEIRKFEEARMAHFAR-RQAAIKAE---EARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAE 1312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 405 KRGKEQQLdimNRQYTQLESRLDEILCRI--AKETEEIKDLEQQLTDGQIAANEALKKDLEGVISGLQEYLGTIKGQATQ 482
Cdd:PTZ00121 1313 EAKKADEA---KKKAEEAKKKADAAKKKAeeAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEE 1389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 483 AQ--NECRKLQDEKETLLQRLTEVQQEKEELELIAMDAENMRKElAELESALQEQHEVNASLQQAQGDLSAYETEletql 560
Cdd:PTZ00121 1390 KKkaDEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKA-DEAKKKAEEAKKADEAKKKAEEAKKAEEAK----- 1463
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 561 klKDAETSQLKQELEKllrrtQLEQSVLQTELEKERESLRDALGKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKEf 640
Cdd:PTZ00121 1464 --KKAEEAKKADEAKK-----KAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKK- 1535
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 641 qnhlnhvVDGLIHPEEVAaRVDELRKRLKL-------GAGEMRIHSPSDVLGKSLADLQKQFSE----ILARSQWEKEEA 709
Cdd:PTZ00121 1536 -------ADEAKKAEEKK-KADELKKAEELkkaeekkKAEEAKKAEEDKNMALRKAEEAKKAEEarieEVMKLYEEEKKM 1607
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 710 QVRERKLHEEMALQQEKLANGQEEfRQACERALEARIKFDKRQHNARIQQLENEIHYLQENLKSMEKIQGLTDLQLQEAD 789
Cdd:PTZ00121 1608 KAEEAKKAEEAKIKAEELKKAEEE-KKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEED 1686
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 790 EEKERILAQLQELEKKKKREDARSQEQFLGLDEELK---SLKKAVAASDKLAAAELTIAKDQLKSLHGTVVRINQERAEE 866
Cdd:PTZ00121 1687 EKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKkaeEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEE 1766
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720399285 867 LQEAERFSREAMQAAKDLSRAEAEIELLqhllrEREGQFRDEMENADLGAKGANSQLLEIEALNEAMAKQRAEI 940
Cdd:PTZ00121 1767 EKKAEEIRKEKEAVIEEELDEEDEKRRM-----EVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEV 1835
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1171-1842 |
5.67e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 58.31 E-value: 5.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1171 LENEVSRLEDIMQHLKSKQ-REERRQKASTQHS---EEEVDGLHRDI----DDLLQEKKELELEVEELHRTIER-HQQRK 1241
Cdd:pfam12128 253 LESAELRLSHLHFGYKSDEtLIASRQEERQETSaelNQLLRTLDDQWkekrDELNGELSAADAAVAKDRSELEAlEDQHG 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1242 DFIDGHVENLMTELEIEKSLKHHEDIVDEIecLEKTLLKRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAK-RNL 1320
Cdd:pfam12128 333 AFLDADIETAAADQEQLPSWQSELENLEER--LKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARdRQL 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1321 LQTESDAEALEK--RAQETALNLVKAEQQLRLLQADAE---DLEQHKIKQEEILKEINKVVAAKDADfqclnEKKEKLTE 1395
Cdd:pfam12128 411 AVAEDDLQALESelREQLEAGKLEFNEEEYRLKSRLGElklRLNQATATPELLLQLENFDERIERAR-----EEQEAANA 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1396 ELQSLQRDIKAAQHSEDHHLQVLRESETLLQAKRAELETLKSQVTSQQQEL-AVLDSELGHRREELLLLQDSLAQAKADL 1474
Cdd:pfam12128 486 EVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLlHFLRKEAPDWEQSIGKVISPELLHRTDL 565
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1475 QEALT----------------LGETEVAEKCSHIREVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEKnlqvvl 1538
Cdd:pfam12128 566 DPEVWdgsvggelnlygvkldLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASR------ 639
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1539 qQLSRHKTELKNVADILQLETSELQGLKLQHdQKVVELEKAQVdvleekleLENLQQATQQQRRELERQRQLLERDRRET 1618
Cdd:pfam12128 640 -EETFARTALKNARLDLRRLFDEKQSEKDKK-NKALAERKDSA--------NERLNSLEAQLKQLDKKHQAWLEEQKEQK 709
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1619 ERVRAESQALQSCVECLSKEKEDLQGQceSWEKKSSHAQRVLAATEESNKMEQSNLGKLELSVRKLRQELEQLSQDKLAL 1698
Cdd:pfam12128 710 REARTEKQAYWQVVEGALDAQLALLKA--AIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERI 787
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1699 HSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLihttkcQNELLNEQTQLQEDISKWMARLESCQKETETKEQQ 1778
Cdd:pfam12128 788 AVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISEL------QQQLARLIADTKLRRAKLEMERKASEKQQVRLSEN 861
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 1779 VQQLQDEIRE-SKLRLDQQEMMFQKLQKEREREEQKFeagKVTLEQQQRQLEKELTDQKSRLKQL 1842
Cdd:pfam12128 862 LRGLRCEMSKlATLKEDANSEQAQGSIGERLAQLEDL---KLKRDYLSESVKKYVEHFKNVIADH 923
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1429-1853 |
7.61e-08 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 57.88 E-value: 7.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1429 RAELETLKSQVTSQQQELAVLDSELGHRREELLLlqdSLAQAKADLQEALTLGETEVAEKCSHIREVKslleelsfqkgE 1508
Cdd:pfam01576 203 RQELEKAKRKLEGESTDLQEQIAELQAQIAELRA---QLAKKEEELQAALARLEEETAQKNNALKKIR-----------E 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1509 LNVHISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNVADilqlETSELQGLKLQHDQKVVELEKAQVDvlEEKL 1588
Cdd:pfam01576 269 LEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELEDTLD----TTAAQQELRSKREQEVTELKKALEE--ETRS 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1589 ELENLQQATQQQRRELERQRQLLERDRRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKKSSHA-------QRVLA 1661
Cdd:pfam01576 343 HEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLegqlqelQARLS 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1662 ATEESNKMEQSNLGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAinsLQEEldstqdhldlAKQDLIHTT 1741
Cdd:pfam01576 423 ESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQEL---LQEE----------TRQKLNLST 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1742 KCQnellneqtQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAGKVTL 1821
Cdd:pfam01576 490 RLR--------QLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQL 561
|
410 420 430
....*....|....*....|....*....|..
gi 1720399285 1822 EQQQRQLEKeLTDQKSRLKQLLTDVSAAEGRL 1853
Cdd:pfam01576 562 EEKAAAYDK-LEKTKNRLQQELDDLLVDLDHQ 592
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1395-1930 |
8.39e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 58.00 E-value: 8.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1395 EELQSLQRDIKAAQHSEDHhLQVLRESETLLQAKRAELETLKSQVTS-----QQQELAVLDSELGHRREELLLLQDSLAQ 1469
Cdd:COG4913 235 DDLERAHEALEDAREQIEL-LEPIRELAERYAAARERLAELEYLRAAlrlwfAQRRLELLEAELEELRAELARLEAELER 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1470 AKADLQEALtlgetevaekcshiREVKSLLEELSFQKGElnvhisekktQLALIQQEMEKEEKNLQVVLQQLSRHKTELK 1549
Cdd:COG4913 314 LEARLDALR--------------EELDELEAQIRGNGGD----------RLEQLEREIERLERELEERERRRARLEALLA 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1550 NVadilqletselqGLKLQHDQKvvELEKAQVDVLEEKLELENLQQATQQQRRELERQRQLLERDRRETERVRAESQALQ 1629
Cdd:COG4913 370 AL------------GLPLPASAE--EFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRK 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1630 S-------------CVECLSKEKE--------DLQGQCESWEK---------------KSSHAQRVLAATEesnkmeqSN 1673
Cdd:COG4913 436 SniparllalrdalAEALGLDEAElpfvgeliEVRPEEERWRGaiervlggfaltllvPPEHYAAALRWVN-------RL 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1674 LGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQlqgKQEAINSLQEELDSTQDHL------DLAKQDLIHTTKCQ--- 1744
Cdd:COG4913 509 HLRGRLVYERVRTGLPDPERPRLDPDSLAGKLDFK---PHPFRAWLEAELGRRFDYVcvdspeELRRHPRAITRAGQvkg 585
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1745 ---------------------------NELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQ--DEIRESKLRLDQ 1795
Cdd:COG4913 586 ngtrhekddrrrirsryvlgfdnraklAALEAELAELEEELAEAEERLEALEAELDALQERREALQrlAEYSWDEIDVAS 665
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1796 QEMMFQKLQKEREReeqkFEAGKVTLEQQQRQLEkELTDQKSRLKQLLTDVSAAEGRLgtlqeeERRIEGLERMLSQAKQ 1875
Cdd:COG4913 666 AEREIAELEAELER----LDASSDDLAALEEQLE-ELEAELEELEEELDELKGEIGRL------EKELEQAEEELDELQD 734
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 1876 QLSEREQQLMAKSGELLALQKEADDMRADFSLLRNQFLTERKKAEKQVAGLKEAL 1930
Cdd:COG4913 735 RLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEEL 789
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1506-2103 |
1.46e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 56.90 E-value: 1.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1506 KGELNVHISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKtELKNVADILQLEtseLQGLKLQHDQKVVELEKAQVDVLE 1585
Cdd:TIGR00618 151 QGEFAQFLKAKSKEKKELLMNLFPLDQYTQLALMEFAKKK-SLHGKAELLTLR---SQLLTLCTPCMPDTYHERKQVLEK 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1586 EKLELENLQQATQQQRRELERQRQLLE---RDRRETERVRAESQALQSCVECLSKEKEDLQGQCEsWEKKSSHAQRVlaa 1662
Cdd:TIGR00618 227 ELKHLREALQQTQQSHAYLTQKREAQEeqlKKQQLLKQLRARIEELRAQEAVLEETQERINRARK-AAPLAAHIKAV--- 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1663 tEESNKMEQSNLGKLELSVRKLRQELEQlSQDKLALHSEVAEVQQQLQGKQEAINSLQEELD---STQDHLDLAKQDL-- 1737
Cdd:TIGR00618 303 -TQIEQQAQRIHTELQSKMRSRAKLLMK-RAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEvatSIREISCQQHTLTqh 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1738 IHTTKCQNELLNEQTQLQEDISKWMARlESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFE-A 1816
Cdd:TIGR00618 381 IHTLQQQKTTLTQKLQSLCKELDILQR-EQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEkI 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1817 GKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSERE---QQLMAKSGELLA 1893
Cdd:TIGR00618 460 HLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGpltRRMQRGEQTYAQ 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1894 LQKEADDMRADFSLLRNQFLTERKKAEKQVAGLkEALKIQRSQLEKNLLEQKQENSCMQKematiELVAQDNHERARRLM 1973
Cdd:TIGR00618 540 LETSEEDVYHQLTSERKQRASLKEQMQEIQQSF-SILTQCDNRSKEDIPNLQNITVRLQD-----LTEKLSEAEDMLACE 613
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1974 --KELSQMQQEYLELKKQVANQKDLERRQMEVSDAMRTLKSEVKDEIRTSLRNLNQFLPELPADLASILERNENL-RELE 2050
Cdd:TIGR00618 614 qhALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEkEQLT 693
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 2051 SLKENFPFT------------TKERIFEEKSNFPQVHIMDEHWRGEALRQRLRRHEDQLKAQLRH 2103
Cdd:TIGR00618 694 YWKEMLAQCqtllrelethieEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKA 758
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
482-909 |
1.49e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 56.70 E-value: 1.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 482 QAQNECRKLQDEKETLLQRLTEVQQEKEELELIAMDAENMRKELAELESALQeQHEVNASLQQAQGDLSAYETELEtQLK 561
Cdd:COG4717 75 ELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ-LLPLYQELEALEAELAELPERLE-ELE 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 562 LKDAETSQLKQELEKLLRRTQLEQSVLQTELEKERESLRDALGKAQSS-EEKQQENNELRTQLKQLQDDNSLLKKQLKEF 640
Cdd:COG4717 153 ERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEElEELQQRLAELEEELEEAQEELEELEEELEQL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 641 QNHLNHvvdglihpEEVAARVDELRKRLKLGAGEMRIHSPSDVLGKSLADLQK----------QFSEILARSQWEKEEAQ 710
Cdd:COG4717 233 ENELEA--------AALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGvlflvlgllaLLFLLLAREKASLGKEA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 711 VRERKLHEEMALQQEKLANGQEEFRqaCERALEARIKFDKRQHNARIQQLENEIHYLQENLK---SMEKIQGLTDLQLQE 787
Cdd:COG4717 305 EELQALPALEELEEEELEELLAALG--LPPDLSPEELLELLDRIEELQELLREAEELEEELQleeLEQEIAALLAEAGVE 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 788 ADEEKERILAQLQELEKKKKREDARSQ--EQFLGLDEELKSLKKAVAASDKLA--AAELTIAKDQLKSLHGTVVRINQER 863
Cdd:COG4717 383 DEEELRAALEQAEEYQELKEELEELEEqlEELLGELEELLEALDEEELEEELEelEEELEELEEELEELREELAELEAEL 462
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 864 ---------AEELQEAERFSREAMQAAKDLSRAEAEIELLQHLLREREGQFRDEM 909
Cdd:COG4717 463 eqleedgelAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREERLPPV 517
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
477-831 |
1.74e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 57.00 E-value: 1.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 477 KGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELELIAMDAENMRKEL-AELESALQEQHEVNASLQQAQGDLSAYE-- 553
Cdd:TIGR02169 673 PAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIeKEIEQLEQEEEKLKERLEELEEDLSSLEqe 752
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 554 --------TELETQLKLKDAETSQLKQELEKL---LRRTQLEQSVLQ-TELEKERESLRDALGKAQSSEEKQQENNELRT 621
Cdd:TIGR02169 753 ienvkselKELEARIEELEEDLHKLEEALNDLearLSHSRIPEIQAElSKLEEEVSRIEARLREIEQKLNRLTLEKEYLE 832
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 622 QLKQ-LQDDNSLLKKQLKEFQNHLnhvvdglihpEEVAARVDELRKRLKLGAGEMRihspsdVLGKSLADLQKQFSEI-- 698
Cdd:TIGR02169 833 KEIQeLQEQRIDLKEQIKSIEKEI----------ENLNGKKEELEEELEELEAALR------DLESRLGDLKKERDELea 896
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 699 -LARSQWEKEEAQVRERKLHEEMALQQEKLANGQEEfrqacERALEARIKFDKR--QHNARIQQLENEIHYLQENLKSME 775
Cdd:TIGR02169 897 qLRELERKIEELEAQIEKKRKRLSELKAKLEALEEE-----LSEIEDPKGEDEEipEEELSLEDVQAELQRVEEEIRALE 971
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1720399285 776 KIQGLtdlqlqeADEEKERILAQLQELEKKKKREdARSQEQFLGLDEELKSLKKAV 831
Cdd:TIGR02169 972 PVNML-------AIQEYEEVLKRLDELKEKRAKL-EEERKAILERIEEYEKKKREV 1019
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1762-1938 |
1.87e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.85 E-value: 1.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1762 MARLESCQKETETKEQQVQQLQdEIRESKLRLDQQEMMFQKLQKEREREEQKFEAGKVTL-EQQQRQLEKELTDQKSRLK 1840
Cdd:COG4913 234 FDDLERAHEALEDAREQIELLE-PIRELAERYAAARERLAELEYLRAALRLWFAQRRLELlEAELEELRAELARLEAELE 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1841 QLLTDVSAAEGRLGTLQEEER-----RIEGLERMLSQAKQQLSEREQ--------------QLMAKSGELLALQKEADDM 1901
Cdd:COG4913 313 RLEARLDALREELDELEAQIRgnggdRLEQLEREIERLERELEERERrrarleallaalglPLPASAEEFAALRAEAAAL 392
|
170 180 190
....*....|....*....|....*....|....*..
gi 1720399285 1902 RADFSLLRNQFLTERKKAEKQVAGLKEALKIQRSQLE 1938
Cdd:COG4913 393 LEALEEELEALEEALAEAEAALRDLRRELRELEAEIA 429
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
1679-1948 |
2.06e-07 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 56.60 E-value: 2.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1679 LSVRKLRQELEQLSQDKLALHSEVAEVqqqLQGKQEAINSLQEELDSTQDHldlakQDLIH-----TTKCQNELLNEqTQ 1753
Cdd:PRK10929 23 PDEKQITQELEQAKAAKTPAQAEIVEA---LQSALNWLEERKGSLERAKQY-----QQVIDnfpklSAELRQQLNNE-RD 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1754 LQEDISKWMArlescqkeTETKEQQVQQLQDEIREsKLRLDQQEmmfqklqKEREREeqkFEAGKVTLEQQQRQLEKELT 1833
Cdd:PRK10929 94 EPRSVPPNMS--------TDALEQEILQVSSQLLE-KSRQAQQE-------QDRARE---ISDSLSQLPQQQTEARRQLN 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1834 DQKSRLKQLLTDVSA-AEGRLGTLQEEERRIEGLERMLSQAkqQLSEREQQLMAK-SGELLalQKEADDMRADFSLLRNQ 1911
Cdd:PRK10929 155 EIERRLQTLGTPNTPlAQAQLTALQAESAALKALVDELELA--QLSANNRQELARlRSELA--KKRSQQLDAYLQALRNQ 230
|
250 260 270
....*....|....*....|....*....|....*..
gi 1720399285 1912 FLTERKKAEKQVAGLKEALKIQRSQLEKNLLEQKQEN 1948
Cdd:PRK10929 231 LNSQRQREAERALESTELLAEQSGDLPKSIVAQFKIN 267
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1274-1488 |
2.22e-07 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 56.18 E-value: 2.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1274 LEKTLLKRRSELREADRLLAE--AENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEKRAQETALNLVKAEQQLRLL 1351
Cdd:COG3206 180 LEEQLPELRKELEEAEAALEEfrQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPEL 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1352 QADAE--DLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEELQSLQRDIKAAQHSEdhhLQVLRESETLLQAKR 1429
Cdd:COG3206 260 LQSPViqQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILASLEAE---LEALQAREASLQAQL 336
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1720399285 1430 AELETLKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQAKadLQEALTLGETEVAEK 1488
Cdd:COG3206 337 AQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEAR--LAEALTVGNVRVIDP 393
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
310-601 |
2.71e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.08 E-value: 2.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 310 TAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLKQLSGRLQHLNRLrQEALDLEIQMEKQRKEIAEKHEEINTVQLATD 389
Cdd:COG4913 607 DNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRL-AEYSWDEIDVASAEREIAELEAELERLDASSD 685
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 390 SLdpkdpkhshmkaqkRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKDLEQQLTDGQIAANEALKKDLEGVISGL 469
Cdd:COG4913 686 DL--------------AALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALL 751
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 470 QEYLGTIKGQATQAQNEcRKLQDEKETLLQRLtevQQEKEELELIamdaenmrkelaeLESALQEQHEVNASLQQAQGDL 549
Cdd:COG4913 752 EERFAAALGDAVERELR-ENLEERIDALRARL---NRAEEELERA-------------MRAFNREWPAETADLDADLESL 814
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1720399285 550 SAYETELEtqlKLKDAETSQLKQELEKLLRRTQLE-QSVLQTELEKERESLRD 601
Cdd:COG4913 815 PEYLALLD---RLEEDGLPEYEERFKELLNENSIEfVADLLSKLRRAIREIKE 864
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
703-977 |
3.08e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.10 E-value: 3.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 703 QWEKEEAQVRERKLHEEMALQQEKLANGQEEFRQACERALEARIkfdkRQHNARIQQLENEIHYLQENLKSMEKiqgltd 782
Cdd:COG1196 219 KEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAEL----AELEAELEELRLELEELELELEEAQA------ 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 783 lQLQEADEEKERILAQLQELEKKKKREDARSQEqflgLDEELKSLKKAVAAsdklAAAELTIAKDQLKSLHGTVVRINQE 862
Cdd:COG1196 289 -EEYELLAELARLEQDIARLEERRRELEERLEE----LEEELAELEEELEE----LEEELEELEEELEEAEEELEEAEAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 863 RAEELQEAERFSREAMQAAKDLSRAEAEIELLQhllrEREGQFRDEMENADLGAKGANSQLLEIEALNEAMAKQRAEITR 942
Cdd:COG1196 360 LAEAEEALLEAEAELAEAEEELEELAEELLEAL----RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEE 435
|
250 260 270
....*....|....*....|....*....|....*
gi 1720399285 943 LRDVLNLTGAGTKGGIENVLEEIAELRHAVSAQNE 977
Cdd:COG1196 436 EEEEEEEALEEAAEEEAELEEEEEALLELLAELLE 470
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
117-649 |
3.13e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.80 E-value: 3.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 117 EEIERLEKDLEKKTVETEELKNKQTKFLEEIKNQDKLNKSLKEEAMLQKQSCEELESDLSTKKELLKQKTVELTRACQKQ 196
Cdd:TIGR04523 117 EQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKL 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 197 YELEQELAfyKIDAKFEPLNYYPSEYAEIDKypdespyigKSRYKRNMFATETYIVSDAQAvQIRKMVPEGGQLRHEHTP 276
Cdd:TIGR04523 197 LKLELLLS--NLKKKIQKNKSLESQISELKK---------QNNQLKDNIEKKQQEINEKTT-EISNTQTQLNQLKDEQNK 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 277 PRVQ-APPDLQLEDTEKKISAAQTRLSELHHEIETAE-QKVLRATQEFK-QLEEAIQQKKISEAEKDLLLKQLSGRLQHL 353
Cdd:TIGR04523 265 IKKQlSEKQKELEQNNKKIKELEKQLNQLKSEISDLNnQKEQDWNKELKsELKNQEKKLEEIQNQISQNNKIISQLNEQI 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 354 NRLRQEALDLEIQMEKQRKEIAEKHEEINTVQLATDSLDPK-----------DPKHSHMKAQKRGKEQQLDIMNRQYTQL 422
Cdd:TIGR04523 345 SQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEiknlesqindlESKIQNQEKLNQQKDEQIKKLQQEKELL 424
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 423 ESRLDEILCRIAKETEEIKDLEQqltdgQIAANEALKKDLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLT 502
Cdd:TIGR04523 425 EKEIERLKETIIKNNSEIKDLTN-----QDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELK 499
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 503 EVQQEKEELELIAMDAENMRKELAELESALQ-EQHEVNASLQQAQGDLSAYETE-----LETQLKLKDAETSQLKQELEK 576
Cdd:TIGR04523 500 KLNEEKKELEEKVKDLTKKISSLKEKIEKLEsEKKEKESKISDLEDELNKDDFElkkenLEKEIDEKNKEIEELKQTQKS 579
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 577 LLrRTQLEQSVLQTELEKERESLRDAL---GKAQSSEEKQ-----QENNELRTQLKQLQDDNSLLKKQLKEFQNHLNHVV 648
Cdd:TIGR04523 580 LK-KKQEEKQELIDQKEKEKKDLIKEIeekEKKISSLEKElekakKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIR 658
|
.
gi 1720399285 649 D 649
Cdd:TIGR04523 659 N 659
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
286-510 |
3.22e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.16 E-value: 3.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 286 QLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAI--QQKKISEAEKDLLLKQlsgrlQHLNRLRQEALDL 363
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIaaLARRIRALEQELAALE-----AELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 364 EIQMEKQRKEIAE------KHEEINTVQLAtdsLDPKDPkhshmkaqkrgkeQQLDIMNRQYTQLESRLDEILCRIAKET 437
Cdd:COG4942 96 RAELEAQKEELAEllralyRLGRQPPLALL---LSPEDF-------------LDAVRRLQYLKYLAPARREQAEELRADL 159
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720399285 438 EEIKDLEQQLT------DGQIAANEALKKDLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEE 510
Cdd:COG4942 160 AELAALRAELEaeraelEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
288-807 |
3.71e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.41 E-value: 3.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 288 EDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLKQLsgrlqhlNRLRQEALDLEIQM 367
Cdd:TIGR04523 162 NDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQI-------SELKKQNNQLKDNI 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 368 EKQRKEIAEKHEEINTVQlatDSLDPKDPKHSHMKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIA-----KETEEIKD 442
Cdd:TIGR04523 235 EKKQQEINEKTTEISNTQ---TQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISdlnnqKEQDWNKE 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 443 LEQQL---------TDGQIAANEALKKDLEGVISGLQEYLG-------TIKGQATQAQNECRKLQDEKETLLQRLTEVQQ 506
Cdd:TIGR04523 312 LKSELknqekkleeIQNQISQNNKIISQLNEQISQLKKELTnsesensEKQRELEEKQNEIEKLKKENQSYKQEIKNLES 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 507 EKEELELIAMDAENMRKELAELESALQEQHEVnasLQQAQGDLSAYETELETQLKLKDAETSQLKQELEKLLRRTQLEQ- 585
Cdd:TIGR04523 392 QINDLESKIQNQEKLNQQKDEQIKKLQQEKEL---LEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLEt 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 586 --SVLQTELEKERESLRDalgKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQNhlnhvvdglihpeevaaRVDE 663
Cdd:TIGR04523 469 qlKVLSRSINKIKQNLEQ---KQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKE-----------------KIEK 528
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 664 LRKRLKlgagemrihspsdVLGKSLADLQKQFSEILARSQWEKEEAQVRER-KLHEEMALQQEKLANGQEEFRQaceral 742
Cdd:TIGR04523 529 LESEKK-------------EKESKISDLEDELNKDDFELKKENLEKEIDEKnKEIEELKQTQKSLKKKQEEKQE------ 589
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 743 earikfdkrqhnaRIQQLENEIHYLQENLKSMEKIQGLTDLQLQEADEEKERILAQLQELEKKKK 807
Cdd:TIGR04523 590 -------------LIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKN 641
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1292-2046 |
3.89e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 55.82 E-value: 3.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1292 LAEAENELACTKEKTKSAVEKFTDAKRNLlqtesdaealeKRAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKE 1371
Cdd:TIGR00606 226 ITSKEAQLESSREIVKSYENELDPLKNRL-----------KEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEK 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1372 InkvvaakdadFQCLNEKKEKLTEELQSLQRDIKAAQHSEDHHLQVLRESETLLQAKRAELETLKSQVTSQQqelavlDS 1451
Cdd:TIGR00606 295 V----------FQGTDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQA------DR 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1452 ELGHRREELLLLQDSLAQAKADLQEALTLGETEVAEKCSHIREVKSLLEELSFQK-GELNVHISEKKTQLALIQQEMEKE 1530
Cdd:TIGR00606 359 HQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLcADLQSKERLKQEQADEIRDEKKGL 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1531 EKNLQVVLQQLSRHKTELKNVADILQ-LETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQ 1609
Cdd:TIGR00606 439 GRTIELKKEILEKKQEELKFVIKELQqLEGSSDRILELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLR 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1610 LLERDRREtervraesqalqscvecLSKEKEDLQgQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLELSVRKLRQELE 1689
Cdd:TIGR00606 519 KLDQEMEQ-----------------LNHHTTTRT-QMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLH 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1690 QLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQtQLQEDISKWMARLESCQ 1769
Cdd:TIGR00606 581 SKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESDLE-RLKEEIEKSSKQRAMLA 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1770 KETETKEQQVQQLQDEiRESKLRLDQQEMmfqKLQKEREREEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAA 1849
Cdd:TIGR00606 660 GATAVYSQFITQLTDE-NQSCCPVCQRVF---QTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGR 735
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1850 EGRLGTLQEE----ERRIEGLERMLSQAKQQLSEREQQLmaksGELLALQKEADDMRADFSLLRnQFLTERKKAEKQVAg 1925
Cdd:TIGR00606 736 QSIIDLKEKEipelRNKLQKVNRDIQRLKNDIEEQETLL----GTIMPEEESAKVCLTDVTIME-RFQMELKDVERKIA- 809
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1926 lKEALKIQRSQLEKNLLEQKQENSCMQKEMATIELVAQDNHERARRLMKELSQMQQEYLELKKQVANQKDLERRQMEVSD 2005
Cdd:TIGR00606 810 -QQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEE 888
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 1720399285 2006 AMRTLKSEVKDEIRTSLRNLNQFLPeLPADLASILERNENL 2046
Cdd:TIGR00606 889 QLVELSTEVQSLIREIKDAKEQDSP-LETFLEKDQQEKEEL 928
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
358-579 |
4.49e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.38 E-value: 4.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 358 QEALDLEIQMEKQRKEIAEKHEEINTVQLATDSLdpkdpkhshmKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKET 437
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKAL----------LKQLAALERRIAALARRIRALEQELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 438 EEIKDLEQQLtdgqiaanEALKKDLEGVI-----SGLQEYLGTIKGQ--ATQAQNECRKLQDEKETLLQRLTEVQQEKEE 510
Cdd:COG4942 90 KEIAELRAEL--------EAQKEELAELLralyrLGRQPPLALLLSPedFLDAVRRLQYLKYLAPARREQAEELRADLAE 161
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720399285 511 LELIAMDAENMRKELAELESALQEQHEVNASLQQAQGDLSAyetELETQLKLKDAETSQLKQELEKLLR 579
Cdd:COG4942 162 LAALRAELEAERAELEALLAELEEERAALEALKAERQKLLA---RLEKELAELAAELAELQQEAEELEA 227
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1170-1652 |
4.87e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.07 E-value: 4.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1170 NLENEVSRLEDIMQHLKSKQREERRQKASTQHSEEEVDGLHRDIDDLLQEKKELELEVEELHRTIERhqqrkdfidghve 1249
Cdd:PRK03918 225 KLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEK------------- 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1250 nlmtELEIEKSLKHHEDIVDEIECLEKTLLKRRSELREADRLLAEAENElactKEKTKSAVEKFTDAKRNLLQTESDAEA 1329
Cdd:PRK03918 292 ----AEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEK----EERLEELKKKLKELEKRLEELEERHEL 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1330 LEK-RAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLtEELQSLQRD--IKA 1406
Cdd:PRK03918 364 YEEaKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAI-EELKKAKGKcpVCG 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1407 AQHSEDHHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELgHRREELLLLQDSLAQAKADLQEALTLGETEVA 1486
Cdd:PRK03918 443 RELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVL-KKESELIKLKELAEQLKELEEKLKKYNLEELE 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1487 EKCSHIREVKSLLEELSFQKGELNVHISEK---KTQLALIQQEMEKEEKNLQVVLQQLS--------------------- 1542
Cdd:PRK03918 522 KKAEEYEKLKEKLIKLKGEIKSLKKELEKLeelKKKLAELEKKLDELEEELAELLKELEelgfesveeleerlkelepfy 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1543 RHKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQrrELERQRQLLERDRRETERVR 1622
Cdd:PRK03918 602 NEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEE--EYEELREEYLELSRELAGLR 679
|
490 500 510
....*....|....*....|....*....|
gi 1720399285 1623 AESQALQSCVECLSKEKEDLQGQCESWEKK 1652
Cdd:PRK03918 680 AELEELEKRREEIKKTLEKLKEELEEREKA 709
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1388-2032 |
5.26e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.07 E-value: 5.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1388 EKKEKLTEELQSLQRDIKAAQHSEDHHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRREELLLLQdsl 1467
Cdd:PRK03918 158 DDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELE--- 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1468 aqakadlqealtlgetevaekcshirEVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEKNLQvVLQQLSRHKTE 1547
Cdd:PRK03918 235 --------------------------ELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIE-ELEEKVKELKE 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1548 LKNVADilqlETSELQGLKLQHDQKVVELEKaqvdvleeklelenlqqatqqqrrELERqrqlLERDRRETERVRAESQA 1627
Cdd:PRK03918 288 LKEKAE----EYIKLSEFYEEYLDELREIEK------------------------RLSR----LEEEINGIEERIKELEE 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1628 LQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSnlgKLELSVRKLRQELEQLSQDKLALHSEVAEVQQ 1707
Cdd:PRK03918 336 KEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKR---LTGLTPEKLEKELEELEKAKEEIEEEISKITA 412
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1708 QlqgkqeaINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTqlQEDISKWMARLESCQKETETKEQQVQQLQDEIR 1787
Cdd:PRK03918 413 R-------IGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHR--KELLEEYTAELKRIEKELKEIEEKERKLRKELR 483
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1788 ESKLRLDQQEMMFQKLQKEREREEQKFEAGKVTLEQQQRQlEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLE 1867
Cdd:PRK03918 484 ELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKK-AEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELE 562
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1868 RMLSQAKQQLSEREQQLMAKSGELLalqKEADDMRADFSLLRNQFLtERKKAEKQVAGLKEALKIQRSQLEKNLLEQKQE 1947
Cdd:PRK03918 563 KKLDELEEELAELLKELEELGFESV---EELEERLKELEPFYNEYL-ELKDAEKELEREEKELKKLEEELDKAFEELAET 638
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1948 NSCMQKEMATIE----LVAQDNHERARRLMKELSQmqqeylELKKQVANQKDLERRQMEVSDAMRTLKSEVK--DEIRTS 2021
Cdd:PRK03918 639 EKRLEELRKELEelekKYSEEEYEELREEYLELSR------ELAGLRAELEELEKRREEIKKTLEKLKEELEerEKAKKE 712
|
650
....*....|.
gi 1720399285 2022 LRNLNQFLPEL 2032
Cdd:PRK03918 713 LEKLEKALERV 723
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1596-1937 |
5.40e-07 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 55.35 E-value: 5.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1596 ATQQQRRELERQRQLLERDRRETERVRAESQ----ALQSCVECLSKEKEDLQGQCESwekKSSHAQRVLAATEESNKMEQ 1671
Cdd:PRK04863 276 RHANERRVHLEEALELRRELYTSRRQLAAEQyrlvEMARELAELNEAESDLEQDYQA---ASDHLNLVQTALRQQEKIER 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1672 SNLGKLELSVRklrqeLEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQ 1751
Cdd:PRK04863 353 YQADLEELEER-----LEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQQAVQALERAK 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1752 TQLQED---ISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQK-----------------EREREE 1811
Cdd:PRK04863 428 QLCGLPdltADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQLVRKiagevsrseawdvarelLRRLRE 507
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1812 QKFEAGKV--------TLEQ---QQRQLEKELTDQKSRLKQLLTDVSAAEGrlgTLQEEERRIEGLERMLSQAKQ----- 1875
Cdd:PRK04863 508 QRHLAEQLqqlrmrlsELEQrlrQQQRAERLLAEFCKRLGKNLDDEDELEQ---LQEELEARLESLSESVSEARErrmal 584
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1876 -----QLSEREQQLMAKSGELLALQK----------EADDMRADFSLLRNQFLTERKKA---EKQVAGLKEALKIQRSQL 1937
Cdd:PRK04863 585 rqqleQLQARIQRLAARAPAWLAAQDalarlreqsgEEFEDSQDVTEYMQQLLERERELtveRDELAARKQALDEEIERL 664
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
278-869 |
5.82e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 55.05 E-value: 5.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 278 RVQAPPDLQLEDTEKKISAAQTRlsELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLKQLSGRLQHLNRLR 357
Cdd:PRK02224 180 RVLSDQRGSLDQLKAQIEEKEEK--DLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 358 QEALDLEIQMEKQRKEIAEKHEEIntvqlatdsldpkdpkhshmkaqkRGKEQQLDimnrqytQLESRLDEILCRIAKET 437
Cdd:PRK02224 258 AEIEDLRETIAETEREREELAEEV------------------------RDLRERLE-------ELEEERDDLLAEAGLDD 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 438 EEIKDLEQQltdgqiaanealKKDLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELEliaMD 517
Cdd:PRK02224 307 ADAEAVEAR------------REELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELE---SE 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 518 AENMRKELAELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAETSQLKQELekllrrtqleqsvlqTELEKERE 597
Cdd:PRK02224 372 LEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRERE---------------AELEATLR 436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 598 SLRDALGKAQ----------------------SSEEKQQENNELRTQLKQLQDDNSLLKKQLkefqnhlnhvvDGLIHPE 655
Cdd:PRK02224 437 TARERVEEAEalleagkcpecgqpvegsphveTIEEDRERVEELEAELEDLEEEVEEVEERL-----------ERAEDLV 505
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 656 EVAARVDELRKRLKLGAGEMRIHSPS-DVLGKSLADLQKQFSEILARSQWEKEEAQvrerKLHEEMALQQEKLANGQEEf 734
Cdd:PRK02224 506 EAEDRIERLEERREDLEELIAERRETiEEKRERAEELRERAAELEAEAEEKREAAA----EAEEEAEEAREEVAELNSK- 580
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 735 RQACERALEARIKFDKRQhnARIQQLENEIHYLQENLKSMEKIQGLTDLQLQEADEEKERILAQLQELEKKKKREDARSQ 814
Cdd:PRK02224 581 LAELKERIESLERIRTLL--AAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEARIEEAREDKERA 658
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 815 EQFLG--------LDEELKSLKKAVAASDKlAAAELTIAKDQLKSLHGTVVRIN--QERAEELQE 869
Cdd:PRK02224 659 EEYLEqveekldeLREERDDLQAEIGAVEN-ELEELEELRERREALENRVEALEalYDEAEELES 722
|
|
| Drf_FH1 |
pfam06346 |
Formin Homology Region 1; This region is found in some of the Diaphanous related formins (Drfs) ... |
1086-1157 |
5.97e-07 |
|
Formin Homology Region 1; This region is found in some of the Diaphanous related formins (Drfs). It consists of low complexity repeats of around 12 residues.
Pssm-ID: 461881 [Multi-domain] Cd Length: 157 Bit Score: 51.41 E-value: 5.97e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720399285 1086 PPfvPPPGYIMYTVLPDGSPVPQGVALYAPSPPLPNSSH----PLTPGTVVYGPPPAGaPIIYGPPPANFAVPLVP 1157
Cdd:pfam06346 82 PP--PPPLPGGAGIPPPPPPLPGGAGVPPPPPPLPGGPGipppPPFPGGPGIPPPPPG-MGMPPPPPFGFGVPAAP 154
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1713-1919 |
6.48e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.00 E-value: 6.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1713 QEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLR 1792
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1793 LDQQE----MMFQKLQKEREREEQKF--------EAGKV-----TLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRL-G 1854
Cdd:COG4942 99 LEAQKeelaELLRALYRLGRQPPLALllspedflDAVRRlqylkYLAPARREQAEELRADLAELAALRAELEAERAELeA 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 1855 TLQEEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDMRADFSLLRNQFLTERKKA 1919
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1326-1871 |
6.61e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 54.68 E-value: 6.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1326 DAEALEKRAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEELQSLQrdik 1405
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELE---- 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1406 aaqhSEDHHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRREELLLLQDS------LAQAKADLQEALT 1479
Cdd:PRK03918 235 ----ELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKaeeyikLSEFYEEYLDELR 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1480 LGETEVAEKCSHIREVKSLLEELSFQKGELNvHISEKKTQLALIQQEMEKEEKNLQVVLQ---QLSRHKTELKN------ 1550
Cdd:PRK03918 311 EIEKRLSRLEEEINGIEERIKELEEKEERLE-ELKKKLKELEKRLEELEERHELYEEAKAkkeELERLKKRLTGltpekl 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1551 VADILQLETS--ELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRREL--ERQRQLLERDRRETERVRAESQ 1626
Cdd:PRK03918 390 EKELEELEKAkeEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELteEHRKELLEEYTAELKRIEKELK 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1627 ALQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLElsvrKLRQELEQLSQDKLALHSEVAEVQ 1706
Cdd:PRK03918 470 EIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELE----KKAEEYEKLKEKLIKLKGEIKSLK 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1707 QQLQGKQEAINSLqEELDSTQDHLDLAKQDLIHTTKCQN----ELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQL 1782
Cdd:PRK03918 546 KELEKLEELKKKL-AELEKKLDELEEELAELLKELEELGfesvEELEERLKELEPFYNEYLELKDAEKELEREEKELKKL 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1783 QDEIRESKLRLDQQEMMFQKLQKEREREEQKF--------EAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLG 1854
Cdd:PRK03918 625 EEELDKAFEELAETEKRLEELRKELEELEKKYseeeyeelREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELE 704
|
570
....*....|....*..
gi 1720399285 1855 TLQEEERRIEGLERMLS 1871
Cdd:PRK03918 705 EREKAKKELEKLEKALE 721
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
286-646 |
8.24e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.39 E-value: 8.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 286 QLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDL--LLKQLSGRLQHLNRLRQEALDL 363
Cdd:COG4717 82 EAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALeaELAELPERLEELEERLEELREL 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 364 EIQMEKQRKEIAEKHEEINTVQLATDSLDPKDPK-----HSHMKAQKRGKEQQLDIMNRQYTQLESRLDEI--LCRIAKE 436
Cdd:COG4717 162 EEELEELEAELAELQEELEELLEQLSLATEEELQdlaeeLEELQQRLAELEEELEEAQEELEELEEELEQLenELEAAAL 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 437 TEEIKDLEQQLT--------DGQIAANEALKKDLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQE- 507
Cdd:COG4717 242 EERLKEARLLLLiaaallalLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEEl 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 508 KEELELIAMDAENMRKELAELESALQEQHEVNASLQQA--QGDLSAYETELETQLKLKDAET-SQLKQELEKLLRRTQLE 584
Cdd:COG4717 322 EELLAALGLPPDLSPEELLELLDRIEELQELLREAEELeeELQLEELEQEIAALLAEAGVEDeEELRAALEQAEEYQELK 401
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720399285 585 Q--SVLQTELEKERESLRDALgKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQNHLNH 646
Cdd:COG4717 402 EelEELEEQLEELLGELEELL-EALDEEELEEELEELEEELEELEEELEELREELAELEAELEQ 464
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
295-953 |
9.49e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 54.35 E-value: 9.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 295 SAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKiseaekDLLLKQlsgrlqHLNRLRQEALDLEIQMEKQRKEI 374
Cdd:pfam15921 220 SAISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKI------ELLLQQ------HQDRIEQLISEHEVEITGLTEKA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 375 AEKHEEINTVQlatdsldpkdpkhSHMKAQKRGKEQQLDIMNRQYTQLESRLDEILC--RIAKETEE--IKDLEQQLTDG 450
Cdd:pfam15921 288 SSARSQANSIQ-------------SQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSelREAKRMYEdkIEELEKQLVLA 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 451 QIAANEA-LKKDLEGVISG-LQEYLGTIKGQATQAQNECRKLQDEKETLLQRLT----EVQQEKEELELIAMDAENMRKE 524
Cdd:pfam15921 355 NSELTEArTERDQFSQESGnLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTgnsiTIDHLRRELDDRNMEVQRLEAL 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 525 LAELESALQEQHEVNASLQQAQGDLSAYETELETQLklkdaetsqlkQELEKLLRRTQLEQSVLQTELEKERESLRDALG 604
Cdd:pfam15921 435 LKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQL-----------ESTKEMLRKVVEELTAKKMTLESSERTVSDLTA 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 605 KAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQNHLNHV---VDGL-IHPEEVAARVDELRKRLK----------L 670
Cdd:pfam15921 504 SLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVqteCEALkLQMAEKDKVIEILRQQIEnmtqlvgqhgR 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 671 GAGEMRIHSPSdvLGKSLADLQKQFSEIlaRSQWEKEEAQVRERKLH-EEMALQQEKLANGQEEFRQACERALEARIKFD 749
Cdd:pfam15921 584 TAGAMQVEKAQ--LEKEINDRRLELQEF--KILKDKKDAKIRELEARvSDLELEKVKLVNAGSERLRAVKDIKQERDQLL 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 750 KRQHNAR--IQQLENEIHYLQENLKS----MEKIQGLTDLQLQEADEEKERILAQLQELEKkkkrEDARSQEQFLGLDEE 823
Cdd:pfam15921 660 NEVKTSRneLNSLSEDYEVLKRNFRNkseeMETTTNKLKMQLKSAQSELEQTRNTLKSMEG----SDGHAMKVAMGMQKQ 735
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 824 LKSLKKAVAAsdklaaaeltiAKDQLKSLHGTVVRINQERAEELQEAERFSREAMQAAKDLSRAEAEIEllqhLLREREG 903
Cdd:pfam15921 736 ITAKRGQIDA-----------LQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELE----VLRSQER 800
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 904 QFRDEMENADLGAKGANSQLLEIEalnEAMAKQRAEITRLR-----DVLNLTGAG 953
Cdd:pfam15921 801 RLKEKVANMEVALDKASLQFAECQ---DIIQRQEQESVRLKlqhtlDVKELQGPG 852
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
123-862 |
9.76e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 54.21 E-value: 9.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 123 EKDLEKKTVETEELKNKQTKFLEEIKNQDKLNKSLKEEAMLQKQSCEELESDLSTKKELLKQKTVELTRACQKQYELEQE 202
Cdd:pfam02463 286 EELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQ 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 203 LAFYKIDAKFeplnyypseyaeIDKYPDESPYIGKSRYKRNMFATETYIVSDAQAVQIRKMVPEGGQLRHEHTpprvqaP 282
Cdd:pfam02463 366 EKLEQLEEEL------------LAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKK------E 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 283 PDLQLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLKQLSGRLQHLNRLRQEALD 362
Cdd:pfam02463 428 ELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARS 507
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 363 LEIQMEKQRK------------------EIAEKHEEINTVQLATDSLDPKDPKHSHMKAQKRGKEqqLDIMNRQYTQLES 424
Cdd:pfam02463 508 GLKVLLALIKdgvggriisahgrlgdlgVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTE--LPLGARKLRLLIP 585
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 425 RLDEILCRIAKETEEIKDLEQQLTDGQIAANEALKKDLE-GVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTE 503
Cdd:pfam02463 586 KLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVvEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVK 665
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 504 VQQEKEELELIAMDAENMRKELAELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAETSQLKQELEKLLRRTQL 583
Cdd:pfam02463 666 ASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKI 745
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 584 EQSVLQTELEKERESLRDALGKAQSSEEKQQENNELRTQLKQLQDDN-SLLKKQLKEFQNHLNHVVDGLIHPEEVAARVD 662
Cdd:pfam02463 746 DEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKeEKLKAQEEELRALEEELKEEAELLEEEQLLIE 825
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 663 ELRKRLKLGAGEMRIHSPSDVLGKSLADLQKQFSEILARSQWEKEEAQVRERKLHEEMALQ--QEKLANGQEEFRQACER 740
Cdd:pfam02463 826 QEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDelESKEEKEKEEKKELEEE 905
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 741 ALEARIKFDKRQHNARIQQLENEIHYLQENLKSMEKIQGLTDLQLQEADEEKERILAQLQELEKKKKRED--------AR 812
Cdd:pfam02463 906 SQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVnlmaieefEE 985
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 1720399285 813 SQEQFLGLDEELKSLKkavAASDKLAAAELTIAKDQLKSLHGTVVRINQE 862
Cdd:pfam02463 986 KEERYNKDELEKERLE---EEKKKLIRAIIEETCQRLKEFLELFVSINKG 1032
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1666-1998 |
1.07e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 53.97 E-value: 1.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1666 SNKMEQSNLGKLELsvRKLRQELEQLSQDkLALHSEVAEVQQQLQG---KQEAINSLQEELDSTQD-HLDLAKQDlihTT 1741
Cdd:pfam17380 285 SERQQQEKFEKMEQ--ERLRQEKEEKARE-VERRRKLEEAEKARQAemdRQAAIYAEQERMAMERErELERIRQE---ER 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1742 KCQNELLNEQtQLQEDISKwMARLESCQKETETKEQQVQQ---------LQDEIRESKLRLDQQEMMFQKLQKE--RERE 1810
Cdd:pfam17380 359 KRELERIRQE-EIAMEISR-MRELERLQMERQQKNERVRQeleaarkvkILEEERQRKIQQQKVEMEQIRAEQEeaRQRE 436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1811 EQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQakQQLSEREQQLMAKSGE 1890
Cdd:pfam17380 437 VRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILE--KELEERKQAMIEEERK 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1891 LLALQKEaddmradfsllrnqfLTERKKAEKQVAGLKEALKIQRSQLEKNLLEQKQEnscmQKEMATIELVAQDNHERAR 1970
Cdd:pfam17380 515 RKLLEKE---------------MEERQKAIYEEERRREAEEERRKQQEMEERRRIQE----QMRKATEERSRLEAMERER 575
|
330 340 350
....*....|....*....|....*....|
gi 1720399285 1971 RLMKEL--SQMQQEYLELKKQVANQKDLER 1998
Cdd:pfam17380 576 EMMRQIveSEKARAEYEATTPITTIKPIYR 605
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
117-942 |
1.20e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 54.21 E-value: 1.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 117 EEIERLEKDLEKKTVETEELKNKQTKFLEEIKNQDKLNKSLKEEAMLQKQSCEELE-----------------SDLSTKK 179
Cdd:pfam02463 166 RLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELeeeyllyldylklneerIDLLQEL 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 180 ELLKQKTVELTRACQK--QYELEQELAFYKIDAKFEPLNYYPSEYAEIDKYPDESPYIgKSRYKRNMFATETYIVSDAQA 257
Cdd:pfam02463 246 LRDEQEEIESSKQEIEkeEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELL-KLERRKVDDEEKLKESEKEKK 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 258 VQIRKMVPEGGQLRHEHTPPRVQAPPDLQLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEA 337
Cdd:pfam02463 325 KAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 338 EKDLLLKQLSGRLQHLNRLRQEALDLEIQMEKQRKEIAEKHEEINTVQLATDSLDPKDPKHSHMKAQKRGKEQQLDIMNR 417
Cdd:pfam02463 405 KEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 418 QYTQLESRLDE----ILCRIAKETEEIKDLEQQLTDGQIAANEALKKDLEGVISGLQEYLGTIKGQA--TQAQNECRKLQ 491
Cdd:pfam02463 485 QLELLLSRQKLeersQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVevSATADEVEERQ 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 492 DEKETLLQRLTEVQQEKEELELIAMDAENMRKELAELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAETSQLK 571
Cdd:pfam02463 565 KLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAK 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 572 QELEKLLRRTQLEQSVLQTELEKERESLRDALGKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQNHLNHVVDGL 651
Cdd:pfam02463 645 ESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLA 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 652 IHPEEVAARVDELRKRLKLGAGEMrihspSDVLGKSLADLQKQFSEILARSQWEKEEAQVRERKLHEEMALQQEKLANGQ 731
Cdd:pfam02463 725 DRVQEAQDKINEELKLLKQKIDEE-----EEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQ 799
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 732 EEFRQACERALEARIKFDKRQHNARIQQLENEIHYLQENLKSMEKIQgltdlQLQEADEEKERILAQLQELEKKKKREDA 811
Cdd:pfam02463 800 EEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQ-----KLEKLAEEELERLEEEITKEELLQELLL 874
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 812 RSQEQFLGLDEELKSLKKAVAASDKLAAAELTIAKDQLKSLHGTVVRINQERAEELQEAERFSREAMQAAKDLSRAEAEI 891
Cdd:pfam02463 875 KEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENN 954
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|.
gi 1720399285 892 ELLQHLLREREGQFRDEMENADLGAKgANSQLLEIEALNEAMAKQRAEITR 942
Cdd:pfam02463 955 KEEEEERNKRLLLAKEELGKVNLMAI-EEFEEKEERYNKDELEKERLEEEK 1004
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1769-1996 |
1.45e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 53.48 E-value: 1.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1769 QKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKER-----EREEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLL 1843
Cdd:COG3206 167 ELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNglvdlSEEAKLLLQQLSELESQLAEARAELAEAEARLAALR 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1844 TDVSAAEGRLGTLQEEERrIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDmradfslLRNQFLTERKKAEKQV 1923
Cdd:COG3206 247 AQLGSGPDALPELLQSPV-IQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAA-------LRAQLQQEAQRILASL 318
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720399285 1924 AGLKEALKIQRSQLEKNLLEQKQEnscmqkematielvaqdnherarrlMKELSQMQQEYLELKKQVANQKDL 1996
Cdd:COG3206 319 EAELEALQAREASLQAQLAQLEAR-------------------------LAELPELEAELRRLEREVEVAREL 366
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1288-1502 |
1.55e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.84 E-value: 1.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1288 ADRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEKRAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEE 1367
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1368 ILKEINKVVAAK-DADFQCLNEKKEKLTEELQSLQRDIKAAQHSEdHHLQVLRESETLLQAKRAELETLKSQVTSQQQEL 1446
Cdd:COG4942 98 ELEAQKEELAELlRALYRLGRQPPLALLLSPEDFLDAVRRLQYLK-YLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1720399285 1447 AVLDSELGHRREELLLLQDSLAQAKADLQEALTLGETEVAEKCSHIREVKSLLEEL 1502
Cdd:COG4942 177 EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
17-74 |
1.56e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.13 E-value: 1.56e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1720399285 17 NLQKLNLAGNEIEHI-PVWFaKKLKSLRVLNLKGNKISSLQDVSklkpLQDLTSLVLID 74
Cdd:pfam13855 2 NLRSLDLSNNRLTSLdDGAF-KGLSNLKVLDLSNNLLTTLSPGA----FSGLPSLRYLD 55
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1444-2069 |
1.58e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 53.82 E-value: 1.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1444 QELAVLDSELGHRREELLLLQDSLAQAKADLQEALTLGETEVAEKcshIREVKSLLEELSFQKGELNVHISEKKTQLALI 1523
Cdd:pfam02463 180 EETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEE---YLLYLDYLKLNEERIDLLQELLRDEQEEIESS 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1524 QQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRE 1603
Cdd:pfam02463 257 KQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEE 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1604 -LERQRQLLERDRRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLELSvR 1682
Cdd:pfam02463 337 iEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELA-R 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1683 KLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLihTTKCQNELLNEQTQLQEDISKWM 1762
Cdd:pfam02463 416 QLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKS--EDLLKETQLVKLQEQLELLLSRQ 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1763 ARLESCQKETETKEQQVQQLQDEIRESKLRLDQqemmFQKLQKEREREEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQL 1842
Cdd:pfam02463 494 KLEERSQKESKARSGLKVLLALIKDGVGGRIIS----AHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRA 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1843 LTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDMRADFSLLRNQFLTERKKAEKQ 1922
Cdd:pfam02463 570 LTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLR 649
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1923 VAGLKEALKIQRSQLEKNLLEQKQENSCMQKEMATIELVAQDNHERARRLMKELSQMQQEYLELKKQVANQKDLERRQME 2002
Cdd:pfam02463 650 KGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQE 729
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720399285 2003 VSDAMRTLKSEVKDEIRTSLRNLNQFLPELPADLASILERNENLRELESLKENFPFTTKERIFEEKS 2069
Cdd:pfam02463 730 AQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKL 796
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
309-942 |
1.59e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 53.53 E-value: 1.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 309 ETAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLKQLSGRL----QHLNRLRQEALDLEIQMEKQRKEIAEKHEeintv 384
Cdd:PRK03918 161 ENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELeevlREINEISSELPELREELEKLEKEVKELEE----- 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 385 qlatdsldpkdpkhshMKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKDLEQqltdgQIAANEALKKDLEG 464
Cdd:PRK03918 236 ----------------LKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEE-----KVKELKELKEKAEE 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 465 VISgLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELELIAMDAENMRKELAELESALQEQHEVNASLQQ 544
Cdd:PRK03918 295 YIK-LSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEE 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 545 AQG---DLSAYETE-LETQLKLKDAETSQLKQELEKLLRRtqleqsvlQTELEKERESLRDALGKAQSSEEKQQENNELR 620
Cdd:PRK03918 374 LERlkkRLTGLTPEkLEKELEELEKAKEEIEEEISKITAR--------IGELKKEIKELKKAIEELKKAKGKCPVCGREL 445
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 621 TQlkqlQDDNSLLKKQLKEFQNHLNHVvdglihpEEVAARVDELRKRLKLGAGEMRIHSPSDVLgKSLADLQKQFSEILA 700
Cdd:PRK03918 446 TE----EHRKELLEEYTAELKRIEKEL-------KEIEEKERKLRKELRELEKVLKKESELIKL-KELAEQLKELEEKLK 513
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 701 RSQWEKEEAQVRE-RKLHEEMALQQEKLANGQEEFRQACEralearikfdkrqHNARIQQLENEIHYLQENLKSMEKIqg 779
Cdd:PRK03918 514 KYNLEELEKKAEEyEKLKEKLIKLKGEIKSLKKELEKLEE-------------LKKKLAELEKKLDELEEELAELLKE-- 578
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 780 LTDLQLQEADEEKERIlaqlQELEKKKKR----EDARSQeqflgLDEELKSLKKAVAASDKlAAAELTIAKDQLKSLHGT 855
Cdd:PRK03918 579 LEELGFESVEELEERL----KELEPFYNEylelKDAEKE-----LEREEKELKKLEEELDK-AFEELAETEKRLEELRKE 648
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 856 VVRINQERAEElqEAERFSREAMQAAKDLSRAEAEIELLQHLLREREGQFRD------EMENADLGAKGANSQLLEIEAL 929
Cdd:PRK03918 649 LEELEKKYSEE--EYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKlkeeleEREKAKKELEKLEKALERVEEL 726
|
650
....*....|...
gi 1720399285 930 NEAMAKQRAEITR 942
Cdd:PRK03918 727 REKVKKYKALLKE 739
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
289-631 |
1.66e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.81 E-value: 1.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 289 DTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQqkkiseaekdlLLKQLsgrLQHLNRLRQEALDleiqme 368
Cdd:PRK04863 834 DPEAELRQLNRRRVELERALADHESQEQQQRSQLEQAKEGLS-----------ALNRL---LPRLNLLADETLA------ 893
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 369 kqrKEIAEKHEEINTVQLATDSLDPKDPKHSHMKAQK---RGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIK---- 441
Cdd:PRK04863 894 ---DRVEEIREQLDEAEEAKRFVQQHGNALAQLEPIVsvlQSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQrrah 970
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 442 ----DLEQQLTDGQiAANEALKKDLEgvisGLQEYLGTIKGQATQAQNECRK-------LQDEKETLLQRLTEVQQEKEE 510
Cdd:PRK04863 971 fsyeDAAEMLAKNS-DLNEKLRQRLE----QAEQERTRAREQLRQAQAQLAQynqvlasLKSSYDAKRQMLQELKQELQD 1045
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 511 LELIAMDAENMRKEL--AELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAETSQLKQELE----------KLL 578
Cdd:PRK04863 1046 LGVPADSGAEERARArrDELHARLSANRSRRNQLEKQLTFCEAEMDNLTKKLRKLERDYHEMREQVVnakagwcavlRLV 1125
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1720399285 579 RRTQLEQSVLQTEL-EKERESLRDALGKAQSSEEKQQENNELRTQLKQLQDDNS 631
Cdd:PRK04863 1126 KDNGVERRLHRRELaYLSADELRSMSDKALGALRLAVADNEHLRDVLRLSEDPK 1179
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1375-1620 |
1.77e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.46 E-value: 1.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1375 VVAAKDADFQCLNEKKEKLTEELQSLQRDIKAAQHSEDHHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELG 1454
Cdd:COG4942 14 AAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1455 HRREELLLLQDSLAQAKADLQealtlgetevaeKCSHIREVKSLLEELSFQKGELNVHIsekktqLALIQQEMEKEEKNL 1534
Cdd:COG4942 94 ELRAELEAQKEELAELLRALY------------RLGRQPPLALLLSPEDFLDAVRRLQY------LKYLAPARREQAEEL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1535 QVVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQLLERD 1614
Cdd:COG4942 156 RADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
....*.
gi 1720399285 1615 RRETER 1620
Cdd:COG4942 236 AAAAAE 241
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1280-1968 |
2.18e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.22 E-value: 2.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1280 KRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAKR-NLLQTESDAEALEKRAQEtalNLVKAEQQLRllqADAEDL 1358
Cdd:PTZ00121 1224 KKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMaHFARRQAAIKAEEARKAD---ELKKAEEKKK---ADEAKK 1297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1359 EQHKIKQEEILKEINKVVAAKDADFQCLNEKK--EKLTEELQSLQRDIKAAQHSEDHHLQVLRESETLLQA--KRAELET 1434
Cdd:PTZ00121 1298 AEEKKKADEAKKKAEEAKKADEAKKKAEEAKKkaDAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAaeKKKEEAK 1377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1435 LKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQAKADLQEALTLGETevAEKCSHIREVKSLLEELSfQKGELNVHIS 1514
Cdd:PTZ00121 1378 KKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKK--AEEKKKADEAKKKAEEAK-KADEAKKKAE 1454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1515 EKKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSELQGlKLQHDQKVVELEKAQvDVLEEKLELENLQ 1594
Cdd:PTZ00121 1455 EAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKK-AAEAKKKADEAKKAE-EAKKADEAKKAEE 1532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1595 QATQQQRRELERQRQLLERDRRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSNL 1674
Cdd:PTZ00121 1533 AKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEA 1612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1675 GKlelsvrklrQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQL 1754
Cdd:PTZ00121 1613 KK---------AEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKA 1683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1755 QEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKER-EREEQKFEAGKVTLEQQQRQLEKELT 1833
Cdd:PTZ00121 1684 EEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKkEAEEDKKKAEEAKKDEEEKKKIAHLK 1763
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1834 DQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQlSEREQQLMAKSGELLALQKEADDMRA-DFSLLRNQF 1912
Cdd:PTZ00121 1764 KEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDN-FANIIEGGKEGNLVINDSKEMEDSAIkEVADSKNMQ 1842
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720399285 1913 LTERKKAEKQVAGL-----KEALKIQRSQLEKNLLEQKQENSCMQKEmatIELVAQDNHER 1968
Cdd:PTZ00121 1843 LEEADAFEKHKFNKnnengEDGNKEADFNKEKDLKEDDEEEIEEADE---IEKIDKDDIER 1900
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
327-712 |
2.25e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.15 E-value: 2.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 327 EAIQQKKISEAEKDLLLKQLSGRLQHLNRLRQEALD-LEIQMEKQRKEIAEKHEEINTvqlatdsldpkdpkhshMKAQK 405
Cdd:TIGR02169 177 EELEEVEENIERLDLIIDEKRQQLERLRREREKAERyQALLKEKREYEGYELLKEKEA-----------------LERQK 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 406 RGKEQQLDIMNRQYTQLESRLDEIlcriAKETEEIKDLEQQLtdgqiaaNEALKKDLEGVISGLQEYLGTIKGQATQaqn 485
Cdd:TIGR02169 240 EAIERQLASLEEELEKLTEEISEL----EKRLEEIEQLLEEL-------NKKIKDLGEEEQLRVKEKIGELEAEIAS--- 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 486 eCRKLQDEKETLLQRLTEVQQEKEEleliamDAENMRKELAELESALQEQHEVNASLQqaqgdlsayeteletqlklkdA 565
Cdd:TIGR02169 306 -LERSIAEKERELEDAEERLAKLEA------EIDKLLAEIEELEREIEEERKRRDKLT---------------------E 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 566 ETSQLKQELEKLLRRTQleqsvlqtELEKERESLRDALGKAQSSEEK-QQENNELRTQLKQLQDDNSLLKKQLKEFQNHL 644
Cdd:TIGR02169 358 EYAELKEELEDLRAELE--------EVDKEFAETRDELKDYREKLEKlKREINELKRELDRLQEELQRLSEELADLNAAI 429
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720399285 645 NHVVDGLihpEEVAARVDELRKRLKlgAGEMRIHSPSDVLGK----------SLADLQKQFSEilARSQWEKEEAQVR 712
Cdd:TIGR02169 430 AGIEAKI---NELEEEKEDKALEIK--KQEWKLEQLAADLSKyeqelydlkeEYDRVEKELSK--LQRELAEAEAQAR 500
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1594-1924 |
2.45e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 52.82 E-value: 2.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1594 QQATQQQRRELERQRQLlerdrRETERVRaesqalqscveclskekedlqgQCESWEKKSSHAQRVLAATEESNKMEqsn 1673
Cdd:pfam17380 302 RQEKEEKAREVERRRKL-----EEAEKAR----------------------QAEMDRQAAIYAEQERMAMERERELE--- 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1674 lgKLELSVRKlrQELEQLSQDKLALH-SEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQT 1752
Cdd:pfam17380 352 --RIRQEERK--RELERIRQEEIAMEiSRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRA 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1753 QLQEDISKWMARLEScQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAgkvtlEQQQRQLEKEL 1832
Cdd:pfam17380 428 EQEEARQREVRRLEE-ERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAE-----EQRRKILEKEL 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1833 TDQKSRL-----KQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSEREQQLMAKSGEllalQKEADDMRADFSL 1907
Cdd:pfam17380 502 EERKQAMieeerKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEE----RSRLEAMEREREM 577
|
330
....*....|....*..
gi 1720399285 1908 LRNQFLTERKKAEKQVA 1924
Cdd:pfam17380 578 MRQIVESEKARAEYEAT 594
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1171-1889 |
2.66e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 53.03 E-value: 2.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1171 LENEVSRLEDIMQHLKSKQREERRQKASTQHSEEEVDGLHRDIDDLLQEKKELELeveelhRTIERHQQRKDFIDGHVEN 1250
Cdd:COG3096 356 LEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQT------RAIQYQQAVQALEKARALC 429
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1251 LMTELEIEKSLKHHEDIVDEIECLEKTLLKRRSELREADRLLAEAENELACTkEKTKSAVEKFT--DAKRNLLQTESDAE 1328
Cdd:COG3096 430 GLPDLTPENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELV-CKIAGEVERSQawQTARELLRRYRSQQ 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1329 ALEKRAQETALNLVKAEQQLRLLQ-----------------ADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKE 1391
Cdd:COG3096 509 ALAQRLQQLRAQLAELEQRLRQQQnaerlleefcqrigqqlDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLE 588
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1392 KLTEELQSLqRDIKAAQHSEDHHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQAK 1471
Cdd:COG3096 589 QLRARIKEL-AARAPAWLAAQDALERLREQSGEALADSQEVTAAMQQLLEREREATVERDELAARKQALESQIERLSQPG 667
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1472 -ADLQEALTLGETEVAEKCSHIREVKSLLE--ELSFQKGELNVHI-----SEKKTQLA----------LIQQE------- 1526
Cdd:COG3096 668 gAEDPRLLALAERLGGVLLSEIYDDVTLEDapYFSALYGPARHAIvvpdlSAVKEQLAgledcpedlyLIEGDpdsfdds 747
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1527 -MEKEEKNLQVVLQ----QL--SRHKTE--LKNVADILQLETselqgLKLQHDQKVVELEKAQVDVLEEKLELENLQQ-- 1595
Cdd:COG3096 748 vFDAEELEDAVVVKlsdrQWrySRFPEVplFGRAAREKRLEE-----LRAERDELAEQYAKASFDVQKLQRLHQAFSQfv 822
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1596 -----------------ATQQQRRELERQrqlLERDRRETERVRAESQALQSCVECLSKekedLQGQCESWEKKsSHAQR 1658
Cdd:COG3096 823 gghlavafapdpeaelaALRQRRSELERE---LAQHRAQEQQLRQQLDQLKEQLQLLNK----LLPQANLLADE-TLADR 894
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1659 VLAATEESNKMEQS---------NLGKLELSVRKLR---QELEQLSQDKLALHSEVAEVQQQLQGKQEAINSL------- 1719
Cdd:COG3096 895 LEELREELDAAQEAqafiqqhgkALAQLEPLVAVLQsdpEQFEQLQADYLQAKEQQRRLKQQIFALSEVVQRRphfsyed 974
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1720 -QEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQem 1798
Cdd:COG3096 975 aVGLLGENSDLNEKLRARLEQAEEARREAREQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQELEELGVQADAE-- 1052
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1799 mfqklQKEREREEqkfeagkvtleqqQRQLEKELTDQKSRLKQLLTdvsaaegrlgTLQEEERRIEGLERMLSQAKQQL- 1877
Cdd:COG3096 1053 -----AEERARIR-------------RDELHEELSQNRSRRSQLEK----------QLTRCEAEMDSLQKRLRKAERDYk 1104
|
810
....*....|..
gi 1720399285 1878 SEREQQLMAKSG 1889
Cdd:COG3096 1105 QEREQVVQAKAG 1116
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1253-1550 |
2.70e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 52.72 E-value: 2.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1253 TELEIEKSLKHHEDIVDEIECLEKTLLKRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEK 1332
Cdd:TIGR04523 326 IQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEK 405
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1333 RAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEELQSLQRDIKAAQHSed 1412
Cdd:TIGR04523 406 LNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQN-- 483
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1413 hhlqvLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELghrrEELLLLQDSLaqakadlqealtlgETEVAEKCSHI 1492
Cdd:TIGR04523 484 -----LEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKI----SSLKEKIEKL--------------ESEKKEKESKI 540
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720399285 1493 REVKSLLEELSFQKGELNV-----HISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKN 1550
Cdd:TIGR04523 541 SDLEDELNKDDFELKKENLekeidEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIK 603
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1594-1953 |
2.71e-06 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 52.77 E-value: 2.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1594 QQATQQQRRELERQRQLLERDRRETE-------RVRAESQALQSCVECLSKEKEDLQGQCESWEKKsshaQRVLAATEES 1666
Cdd:COG5022 765 LQALKRIKKIQVIQHGFRLRRLVDYElkwrlfiKLQPLLSLLGSRKEYRSYLACIIKLQKTIKREK----KLRETEEVEF 840
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1667 NKMEQSNLGKLELSVRKL-RQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQeELDSTQDHLDlakQDLIHTTKCQN 1745
Cdd:COG5022 841 SLKAEVLIQKFGRSLKAKkRFSLLKKETIYLQSAQRVELAERQLQELKIDVKSIS-SLKLVNLELE---SEIIELKKSLS 916
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1746 ELLNEQTQLQediSKWMARLESCQKETETKEQ---------QVQQLQDEIRESKLRLDQQEMMFQKLQKERER---EEQK 1813
Cdd:COG5022 917 SDLIENLEFK---TELIARLKKLLNNIDLEEGpsieyvklpELNKLHEVESKLKETSEEYEDLLKKSTILVREgnkANSE 993
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1814 FEAGKVTLEQQQRQLEKeLTDQKSRLKQLLTDVS---AAEGRLGTLQEEERR---IEGLERMLSQAKQQLSEREQQLMAK 1887
Cdd:COG5022 994 LKNFKKELAELSKQYGA-LQESTKQLKELPVEVAelqSASKIISSESTELSIlkpLQKLKGLLLLENNQLQARYKALKLR 1072
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720399285 1888 SGELLALQKEADDMRADFSLLRNQFLTERKKAEKQVAGLKEALKIQRSQLEKNLLEQKQENSCMQK 1953
Cdd:COG5022 1073 RENSLLDDKQLYQLESTENLLKTINVKDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQL 1138
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1653-1883 |
3.11e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 51.75 E-value: 3.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1653 SSHAQRVLAATEESNKMEQSNLGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDL 1732
Cdd:COG3883 11 PAFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1733 AKQDLIHTTKCQNELlnEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIREsklrldqqemmFQKLQKEREREEQ 1812
Cdd:COG3883 91 RARALYRSGGSVSYL--DVLLGSESFSDFLDRLSALSKIADADADLLEELKADKAE-----------LEAKKAELEAKLA 157
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720399285 1813 KFEAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSEREQQ 1883
Cdd:COG3883 158 ELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAA 228
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1821-2042 |
3.37e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.69 E-value: 3.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1821 LEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLqeeERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADD 1900
Cdd:COG4942 25 AEAELEQLQQEIAELEKELAALKKEEKALLKQLAAL---ERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1901 MRADFS-LLRNQFLTERKKAEKQVAGLKEALKIQRSQ--LEKNLLEQKQENSCMQKEMATIELVAQDNHERARRLMKELS 1977
Cdd:COG4942 102 QKEELAeLLRALYRLGRQPPLALLLSPEDFLDAVRRLqyLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLA 181
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 1978 QMQQEYLELKKQVANQKDLERRqmevSDAMRTLKSEVKDEIRTSLRNLNQFLPELPADLASILER 2042
Cdd:COG4942 182 ELEEERAALEALKAERQKLLAR----LEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1351-1731 |
3.63e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 52.38 E-value: 3.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1351 LQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEelqsLQRDIKAAQHSEDHHLQVLRESETLLQAKRA 1430
Cdd:TIGR02169 676 LQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGE----IEKEIEQLEQEEEKLKERLEELEEDLSSLEQ 751
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1431 ELETLKSqvtsqqqELAVLDSELGHRREELLLLQDSLAQAKADLqealtlGETEVAEKCSHIREVKSLLEELSFQKGELN 1510
Cdd:TIGR02169 752 EIENVKS-------ELKELEARIEELEEDLHKLEEALNDLEARL------SHSRIPEIQAELSKLEEEVSRIEARLREIE 818
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1511 VHISEkktqLALIQQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQKVVELEKaqvdvleeklel 1590
Cdd:TIGR02169 819 QKLNR----LTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLES------------ 882
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1591 enlqqatqqQRRELERQRQLLERDRRETERvraESQALQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKME 1670
Cdd:TIGR02169 883 ---------RLGDLKKERDELEAQLRELER---KIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEE 950
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720399285 1671 QSnLGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLD 1731
Cdd:TIGR02169 951 LS-LEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIE 1010
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1293-1487 |
3.87e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 51.75 E-value: 3.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1293 AEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEKRAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKE- 1371
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGEr 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1372 -------------INKVVAAKD-ADF-------QCLNEKKEKLTEELQSLQRDIKAAQHSedhhlqvLRESETLLQAKRA 1430
Cdd:COG3883 92 aralyrsggsvsyLDVLLGSESfSDFldrlsalSKIADADADLLEELKADKAELEAKKAE-------LEAKLAELEALKA 164
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1720399285 1431 ELETLKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQAKADLQEALTLGETEVAE 1487
Cdd:COG3883 165 ELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAA 221
|
|
| Drf_FH1 |
pfam06346 |
Formin Homology Region 1; This region is found in some of the Diaphanous related formins (Drfs) ... |
1086-1148 |
3.91e-06 |
|
Formin Homology Region 1; This region is found in some of the Diaphanous related formins (Drfs). It consists of low complexity repeats of around 12 residues.
Pssm-ID: 461881 [Multi-domain] Cd Length: 157 Bit Score: 48.71 E-value: 3.91e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720399285 1086 PPFVPPPGYIMYTVLPDGSPVPqgvalyaPSPPLPNSSH----PLTPGTVVYGPPPA--GAPIIYGPPP 1148
Cdd:pfam06346 1 PPPPPLPGDSSTIPLPPGACIP-------TPPPLPGGGGppppPPLPGSAAIPPPPPlpGGTSIPPPPP 62
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
286-539 |
4.17e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 52.37 E-value: 4.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 286 QLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQkkiSEAEKDLLLKQLSGRLQHLNRLRQEALDLEI 365
Cdd:TIGR02168 748 RIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQ---LKEELKALREALDELRAELTLLNEEAANLRE 824
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 366 QMEKQRKEIAEKHEEINTVQlatdsldpkdpkhshmkAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKDLEQ 445
Cdd:TIGR02168 825 RLESLERRIAATERRLEDLE-----------------EQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEE 887
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 446 QLTDGQIAANEALKK--DLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEEL-----ELIAMDA 518
Cdd:TIGR02168 888 ALALLRSELEELSEElrELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEaealeNKIEDDE 967
|
250 260
....*....|....*....|.
gi 1720399285 519 ENMRKELAELESALQEQHEVN 539
Cdd:TIGR02168 968 EEARRRLKRLENKIKELGPVN 988
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
282-812 |
4.33e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 52.36 E-value: 4.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 282 PPDLQLEDT----EKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEaiQQKKISEAEKDLLLKQlsgrlqhlnrlr 357
Cdd:TIGR00606 570 PNKKQLEDWlhskSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEE--QLSSYEDKLFDVCGSQ------------ 635
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 358 qealDLEIQMEKQRKEIAEKHEEINTVQLATDSldpkdpkHSHMKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKET 437
Cdd:TIGR00606 636 ----DEESDLERLKEEIEKSSKQRAMLAGATAV-------YSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKL 704
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 438 EEIKDlEQQLTDGQIAANEALKKDLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTE-------VQQEKEE 510
Cdd:TIGR00606 705 RLAPD-KLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEqetllgtIMPEEES 783
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 511 LELIAMDAENMRKELAELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAET-SQLKQELEKLLRRTQLEQSVLQ 589
Cdd:TIGR00606 784 AKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTvVSKIELNRKLIQDQQEQIQHLK 863
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 590 T---ELEKERESLRDALGKAQS----SEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQNHLNHVVDGLIHPEEVAA-RV 661
Cdd:TIGR00606 864 SktnELKSEKLQIGTNLQRRQQfeeqLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQdKV 943
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 662 DELRKRLKLGAGEMRihSPSDVLGKSLADLQKQFSEILARSQWEKEEAQVRERKLHEEMALQQEKLANGQEEFR----QA 737
Cdd:TIGR00606 944 NDIKEKVKNIHGYMK--DIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERwlqdNL 1021
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 738 CERALEARIK--------FDKRQHNARIQQLENEIHYLQENLKSMEKIQGLTDLQLQEADEEKERILAQLQELEKKKKRE 809
Cdd:TIGR00606 1022 TLRKRENELKeveeelkqHLKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQFRDAEE 1101
|
...
gi 1720399285 810 DAR 812
Cdd:TIGR00606 1102 KYR 1104
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1606-2017 |
4.37e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 52.08 E-value: 4.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1606 RQRQLLERDRRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQsnlgkLELSVRKLR 1685
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEA-----LEAELAELP 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1686 QELEQLSQDklalHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQ-NELLNEQTQLQEDISKWMAR 1764
Cdd:COG4717 146 ERLEELEER----LEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEElEELQQRLAELEEELEEAQEE 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1765 LESCQKETETKEQQVQQLQDEIRESKLRLDQ------------------------------------QEMMFQKLQKERE 1808
Cdd:COG4717 222 LEELEEELEQLENELEAAALEERLKEARLLLliaaallallglggsllsliltiagvlflvlgllalLFLLLAREKASLG 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1809 REEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQakQQLSEREQQLMAKS 1888
Cdd:COG4717 302 KEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQL--EELEQEIAALLAEA 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1889 G--------ELLALQKEADDMRADFSLLRNQFLTERKKAEKQVAGL-KEALKIQRSQLEKNLLEQKQENSCMQKEMATIE 1959
Cdd:COG4717 380 GvedeeelrAALEQAEEYQELKEELEELEEQLEELLGELEELLEALdEEELEEELEELEEELEELEEELEELREELAELE 459
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1960 lvaqdnhERARRLMK--ELSQMQQEYLELKKQVANQKDLERRQMEVSDAMRTLKSEVKDE 2017
Cdd:COG4717 460 -------AELEQLEEdgELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREE 512
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1678-1899 |
4.73e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 51.37 E-value: 4.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1678 ELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLihttkcqNELLNEQTQLQED 1757
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEI-------AEAEAEIEERREE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1758 ISKWMARLESCQKETETKEQ--QVQQLQDEIRESKLR---LDQQEMMFQKLQKEREREEQKfeagKVTLEQQQRQLEKEL 1832
Cdd:COG3883 88 LGERARALYRSGGSVSYLDVllGSESFSDFLDRLSALskiADADADLLEELKADKAELEAK----KAELEAKLAELEALK 163
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720399285 1833 TDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEAD 1899
Cdd:COG3883 164 AELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAA 230
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
409-616 |
6.32e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 51.56 E-value: 6.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 409 EQQLDIMNRQYTQLESRLDEILCR--IAKETEEIKDLEQQLTD--GQIAANEALKKDLEGVISGLQEYLGTIKGQATQAQ 484
Cdd:COG3206 181 EEQLPELRKELEEAEAALEEFRQKngLVDLSEEAKLLLQQLSEleSQLAEARAELAEAEARLAALRAQLGSGPDALPELL 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 485 NecrklQDEKETLLQRLTEVQQEKEELELIAMDA----ENMRKELAELESALQEqhEVNASLQQAQGDLSAYETELETQL 560
Cdd:COG3206 261 Q-----SPVIQQLRAQLAELEAELAELSARYTPNhpdvIALRAQIAALRAQLQQ--EAQRILASLEAELEALQAREASLQ 333
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1720399285 561 KLKDAETSQLKQeleklLRRTQLEQSVLQTELEKERESLRDALGKAQSSEEKQQEN 616
Cdd:COG3206 334 AQLAQLEARLAE-----LPELEAELRRLEREVEVARELYESLLQRLEEARLAEALT 384
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
284-577 |
7.27e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 51.60 E-value: 7.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 284 DLQLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFK-----------QLEEAIQQKKISEAEkdlllkqlsgrlqh 352
Cdd:TIGR02168 718 RKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTeleaeieeleeRLEEAEEELAEAEAE-------------- 783
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 353 LNRLRQEALDLEIQMEKQRKEIAEKHEEINTVQLATDSLDPKdpkhshmkaqKRGKEQQLDIMNRQYTQLESRLDEILCR 432
Cdd:TIGR02168 784 IEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRER----------LESLERRIAATERRLEDLEEQIEELSED 853
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 433 IAKETEEIKDLEQQLTDGQIAANEALKKdlegvISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELE 512
Cdd:TIGR02168 854 IESLAAEIEELEELIEELESELEALLNE-----RASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLE 928
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 513 LiamDAENMRKELAELESALQEQHEVNAslqqaqGDLSAYETELETQLKLKDAETSQLKQELEKL 577
Cdd:TIGR02168 929 L---RLEGLEVRIDNLQERLSEEYSLTL------EEAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1523-1985 |
8.57e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.07 E-value: 8.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1523 IQQEMEKEEKNLQVvLQQLSRHKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDvleeklELENLQQATQQQRR 1602
Cdd:COG4913 240 AHEALEDAREQIEL-LEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELE------ELRAELARLEAELE 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1603 ELERQRQLLERDRRETERVRAES--QALQScvecLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLels 1680
Cdd:COG4913 313 RLEARLDALREELDELEAQIRGNggDRLEQ----LEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAAL--- 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1681 VRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQ-------DHLDLAKQDLIHTTK---------Cq 1744
Cdd:COG4913 386 RAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLErrksnipARLLALRDALAEALGldeaelpfvG- 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1745 nELLneqtQLQEDISKW-MA---------------------------------RLESCQKETETKEQQVQQLQD------ 1784
Cdd:COG4913 465 -ELI----EVRPEEERWrGAiervlggfaltllvppehyaaalrwvnrlhlrgRLVYERVRTGLPDPERPRLDPdslagk 539
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1785 -EIRESKLR---------------------LDQQEM-------------MFQKLQKEREREEQKF----EAGKVTLEQQQ 1825
Cdd:COG4913 540 lDFKPHPFRawleaelgrrfdyvcvdspeeLRRHPRaitragqvkgngtRHEKDDRRRIRSRYVLgfdnRAKLAALEAEL 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1826 RQLEKELTDQKSRLKQL------LTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQ----------LSEREQQLMAKSG 1889
Cdd:COG4913 620 AELEEELAEAEERLEALeaeldaLQERREALQRLAEYSWDEIDVASAEREIAELEAElerldassddLAALEEQLEELEA 699
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1890 ELLALQKEADDMRADFSLLRN---QFLTERKKAEKQVAGL-KEALKIQRSQLEKNLLEQKQENScMQKEMATIELVAQDN 1965
Cdd:COG4913 700 ELEELEEELDELKGEIGRLEKeleQAEEELDELQDRLEAAeDLARLELRALLEERFAAALGDAV-ERELRENLEERIDAL 778
|
570 580
....*....|....*....|
gi 1720399285 1966 HERARRLMKELSQMQQEYLE 1985
Cdd:COG4913 779 RARLNRAEEELERAMRAFNR 798
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
387-622 |
8.70e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 50.60 E-value: 8.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 387 ATDSLDPKDPKHSHMKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKDLEQQLTDGQiAANEALKKDLEGVI 466
Cdd:COG3883 14 ADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAE-AEIEERREELGERA 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 467 SGLQE------YLGTIKGQATQAQ--NECRKLQDEKETLLQRLTEVQQEKEELELIAMDAEnmrKELAELESALQEQHEV 538
Cdd:COG3883 93 RALYRsggsvsYLDVLLGSESFSDflDRLSALSKIADADADLLEELKADKAELEAKKAELE---AKLAELEALKAELEAA 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 539 NASLQQAQGDLSAYETELETQLKLKDAETSQLKQELEKLLRRTQLEQSVLQTELEKERESLRDALGKAQSSEEKQQENNE 618
Cdd:COG3883 170 KAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAGA 249
|
....
gi 1720399285 619 LRTQ 622
Cdd:COG3883 250 GAAG 253
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
106-551 |
9.90e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.81 E-value: 9.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 106 DRQEAFErfslEEIERLEKDLEKKTVETEELKNKQTKFLEEIKNQDKLNKSLKEEAmlqkqscEELESDLSTKKELLKQK 185
Cdd:PRK02224 314 ARREELE----DRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEA-------AELESELEEAREAVEDR 382
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 186 TVELTracqkqyELEQEL-----AFYKIDAKFEPLNYYPSEYAEidkypDESPYIGKSRYKRNMFATETYIVSDAQAVQI 260
Cdd:PRK02224 383 REEIE-------ELEEEIeelreRFGDAPVDLGNAEDFLEELRE-----ERDELREREAELEATLRTARERVEEAEALLE 450
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 261 RKMVPEGGQlrhehtpPRVQAPPDLQLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQ---EFKQLEEAIQQKKISEA 337
Cdd:PRK02224 451 AGKCPECGQ-------PVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDlveAEDRIERLEERREDLEE 523
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 338 EKDLLLKQLSGRLQHLNRLRQEALDLEIQMEKQRKEIAEKHEEINTVQLATDSLDPKDP----------KHSHMKAQKRG 407
Cdd:PRK02224 524 LIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAelkeriesleRIRTLLAAIAD 603
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 408 KEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKDLEQQLTDGQIAANEALKKDLEGVISGLQEYLgtikgqatqaqnec 487
Cdd:PRK02224 604 AEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEARIEEAREDKERAEEYLEQVEEKL-------------- 669
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720399285 488 RKLQDEKETLLQRLTEVQQEKEELEliamDAENMRKELAELESALQEQHEVNASLQQAQGDLSA 551
Cdd:PRK02224 670 DELREERDDLQAEIGAVENELEELE----ELRERREALENRVEALEALYDEAEELESMYGDLRA 729
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
95-817 |
1.26e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 50.74 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 95 ESLEGQPVTTQDRQEAFERFSLEEIERLEKDLEKKTVETEELKNKQ--TKFLEEIKNQDKLNKSLKEEAMLQKQSCEELE 172
Cdd:TIGR00618 167 ELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCmpDTYHERKQVLEKELKHLREALQQTQQSHAYLT 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 173 SDLSTKKELLK--QKTVELTRACQKQYELEQELAFYK----IDAKFEPLNYYPSEYAEIDKYPDESPYIGKSRYKRNMFA 246
Cdd:TIGR00618 247 QKREAQEEQLKkqQLLKQLRARIEELRAQEAVLEETQerinRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 247 TETYIVSDAQAVQIRKMVPEGGQLRHEHTPPRVQAPPDLQLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQL- 325
Cdd:TIGR00618 327 LMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILq 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 326 EEAIQQKKISEAEKDLLLKQLSGRLQHLNRLRQEALdLEIQMEKQRKEIAEKHEEINTVQLATDSLdpkdpkhshmKAQK 405
Cdd:TIGR00618 407 REQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAEL-CAAAITCTAQCEKLEKIHLQESAQSLKER----------EQQL 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 406 RGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKDLEQQLTD-GQIAANEALKKDLEGVISGLQEYLGTIKGQATQAQ 484
Cdd:TIGR00618 476 QTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDiDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSER 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 485 NECRKLQDEKETLLQRLTEVQQEKEELEliaMDAENMRKELAELESALQEQHEVNASLQQAQgdlsaYETELETQLKLKD 564
Cdd:TIGR00618 556 KQRASLKEQMQEIQQSFSILTQCDNRSK---EDIPNLQNITVRLQDLTEKLSEAEDMLACEQ-----HALLRKLQPEQDL 627
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 565 AETSQLKQELEKLLRRTQLEQSVLQTELEKERE---SLRDALGKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQ 641
Cdd:TIGR00618 628 QDVRLHLQQCSQELALKLTALHALQLTLTQERVrehALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLR 707
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 642 NHLNHVVDGLIHPEEVAarvdelrkrLKLGAGEMRIHSPSDVLGKSLADLQKQFSEILARSqwEKEEAQVRERKLHEEMA 721
Cdd:TIGR00618 708 ELETHIEEYDREFNEIE---------NASSSLGSDLAAREDALNQSLKELMHQARTVLKAR--TEAHFNNNEEVTAALQT 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 722 LQQEKLANGQEEFRQACERALEARIKFDKRQHNARIQqleneiHYLQENLKSMEKIQG---LTDLQLQEADEEKERILAQ 798
Cdd:TIGR00618 777 GAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIP------SDEDILNLQCETLVQeeeQFLSRLEEKSATLGEITHQ 850
|
730
....*....|....*....
gi 1720399285 799 LQELEKKKKREDARSQEQF 817
Cdd:TIGR00618 851 LLKYEECSKQLAQLTQEQA 869
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1668-2050 |
1.40e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.40 E-value: 1.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1668 KMEQSNLGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNEL 1747
Cdd:TIGR04523 92 KKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEEL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1748 LNEQTQLQEDIS------------------------KWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKL 1803
Cdd:TIGR04523 172 ENELNLLEKEKLniqknidkiknkllklelllsnlkKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNT 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1804 QKEREREEQKFEAGKVTLEQQQRQLE------KELTDQKSRLKQLLTDVSAaEGRLGTLQEEERRIEGLERMLSQAKQQL 1877
Cdd:TIGR04523 252 QTQLNQLKDEQNKIKKQLSEKQKELEqnnkkiKELEKQLNQLKSEISDLNN-QKEQDWNKELKSELKNQEKKLEEIQNQI 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1878 SEREQQLMAKSGELLALQKEADDMRADFSLLRNQF---LTERKKAEKQVAGLKEA---LKIQRSQLEKNLLEQKQENSCM 1951
Cdd:TIGR04523 331 SQNNKIISQLNEQISQLKKELTNSESENSEKQRELeekQNEIEKLKKENQSYKQEiknLESQINDLESKIQNQEKLNQQK 410
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1952 QKEMATIELVAQDNHERARRLMKELSQMQQEYLELKKQVANQKDLERRQMEVSDAMRTLKSEVKDEIRTSLRNLNQFLPE 2031
Cdd:TIGR04523 411 DEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKE 490
|
410
....*....|....*....
gi 1720399285 2032 LPADLASILERNENLRELE 2050
Cdd:TIGR04523 491 LKSKEKELKKLNEEKKELE 509
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
313-805 |
1.62e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.15 E-value: 1.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 313 QKVLRATQEFKQLEEAIQQKKISEAEkdlllkqlsgrlqhLNRLRQEALDLEIQMEKQRKEIAEKHEEINTVQLATDSLD 392
Cdd:COG4717 64 RKPELNLKELKELEEELKEAEEKEEE--------------YAELQEELEELEEELEELEAELEELREELEKLEKLLQLLP 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 393 PkdpkhshmKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIaketEEIKDLEQQLTDGQIAANEALKKDLEGVISGLQey 472
Cdd:COG4717 130 L--------YQELEALEAELAELPERLEELEERLEELRELE----EELEELEAELAELQEELEELLEQLSLATEEELQ-- 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 473 lgtikgqatQAQNECRKLQDEKETLLQRLTEVQQEKEELEliamdaenmrKELAELESALQEQHEVNaSLQQAQGDLSAy 552
Cdd:COG4717 196 ---------DLAEELEELQQRLAELEEELEEAQEELEELE----------EELEQLENELEAAALEE-RLKEARLLLLI- 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 553 ETELETQLKLKDAETSQLKQELEKLLRRTQLeQSVLQTELEKERESLRDALGKAQSSEEKQQ-ENNELRTQLKQLQDDNS 631
Cdd:COG4717 255 AAALLALLGLGGSLLSLILTIAGVLFLVLGL-LALLFLLLAREKASLGKEAEELQALPALEElEEEELEELLAALGLPPD 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 632 LLKKQLKEFQNHLNHVVdglihpeEVAARVDELRKRLKlgagemrihspsdvlgksLADLQKQFSEILARSQWEKEEAQV 711
Cdd:COG4717 334 LSPEELLELLDRIEELQ-------ELLREAEELEEELQ------------------LEELEQEIAALLAEAGVEDEEELR 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 712 RERKLHEEMALQQEKLANGQEEFRQACERALEARIKFDKRQHNARIQQLENEIHYLQENLKSM-EKIQGL--------TD 782
Cdd:COG4717 389 AALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELrEELAELeaeleqleED 468
|
490 500
....*....|....*....|...
gi 1720399285 783 LQLQEADEEKERILAQLQELEKK 805
Cdd:COG4717 469 GELAELLQELEELKAELRELAEE 491
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
438-908 |
2.22e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.77 E-value: 2.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 438 EEIKDLEQQLtdGQIAANEALKKDLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKEtLLQRLTEVQQEKEELELIAmd 517
Cdd:COG4717 71 KELKELEEEL--KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ-LLPLYQELEALEAELAELP-- 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 518 aenmrKELAELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAETsqlKQELEKLLRRTQleqsvlqtELEKERE 597
Cdd:COG4717 146 -----ERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLAT---EEELQDLAEELE--------ELQQRLA 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 598 SLRDALgkaqssEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQNHLNHVVDGLIHpeEVAARVDELRKRLKLGAGemri 677
Cdd:COG4717 210 ELEEEL------EEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALL--ALLGLGGSLLSLILTIAG---- 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 678 hspsdvLGKSLADLQKQFSEILARSQWEKEEAQVRERKLHEEMALQQEKLANGQEEFRqaCERALEARIKFDKRQHNARI 757
Cdd:COG4717 278 ------VLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALG--LPPDLSPEELLELLDRIEEL 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 758 QQLENEIHYLQENLK---SMEKIQGLTDLQLQEADEEKERILAQLQELEKKKKREDARSQ--EQFLGLDEELKSLKKAVA 832
Cdd:COG4717 350 QELLREAEELEEELQleeLEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEqlEELLGELEELLEALDEEE 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 833 ASDKLA--AAELTIAKDQLKSLHGTVVRINQ-----ERAEELQEAERFSREAMQAAKDLSRAEAEIELLQHLLREREGQF 905
Cdd:COG4717 430 LEEELEelEEELEELEEELEELREELAELEAeleqlEEDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEY 509
|
...
gi 1720399285 906 RDE 908
Cdd:COG4717 510 REE 512
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
486-977 |
2.22e-05 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 49.75 E-value: 2.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 486 ECRKLQDE----KETLLQRLTEVQQEKEELELIAMDAENMRKELAELESALQEQHEVNASLQQAQgdlsayETELETQLK 561
Cdd:pfam07111 74 ELRRLEEEvrllRETSLQQKMRLEAQAMELDALAVAEKAGQAEAEGLRAALAGAEMVRKNLEEGS------QRELEEIQR 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 562 LKDAETSQLKQELEKLL-----RRTQLEQSVLQTELEKEreslrdalGKAQSSEEKQQENNELRTQLKQLQDDnslLKKQ 636
Cdd:pfam07111 148 LHQEQLSSLTQAHEEALssltsKAEGLEKSLNSLETKRA--------GEAKQLAEAQKEAELLRKQLSKTQEE---LEAQ 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 637 LKEFQNHLNHVVDGLihPEEVAARVDELRKrlklgagemrihspsdvlgKSLADLQKQFSEILARSQWEKEEAQVRERKL 716
Cdd:pfam07111 217 VTLVESLRKYVGEQV--PPEVHSQTWELER-------------------QELLDTMQHLQEDRADLQATVELLQVRVQSL 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 717 HEEMALQQEKLANG-------QEEFRQACER----------ALEARIKFDKRQHNARIQQLENEIHYLQENLKSMEKIQG 779
Cdd:pfam07111 276 THMLALQEEELTRKiqpsdslEPEFPKKCRSllnrwrekvfALMVQLKAQDLEHRDSVKQLRGQVAELQEQVTSQSQEQA 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 780 LTDLQLQE--ADEEKERILAQLQELEKKKKREDARSQEQFLG-LDEELKSLKKAVAASD----------KLAAAELTIAK 846
Cdd:pfam07111 356 ILQRALQDkaAEVEVERMSAKGLQMELSRAQEARRRQQQQTAsAEEQLKFVVNAMSSTQiwlettmtrvEQAVARIPSLS 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 847 DQL----------KSLHGTVVRINQERAEELQEAER-------FSREAMQAAKDLSRAEAEIELLQHLLREREGQFRDEM 909
Cdd:pfam07111 436 NRLsyavrkvhtiKGLMARKVALAQLRQESCPPPPPappvdadLSLELEQLREERNRLDAELQLSAHLIQQEVGRAREQG 515
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720399285 910 EnadlgakgansqlLEIEALNEAMAKQRAEITRLRDVLNLTG---AGTKGGIENVLEEIAELRHAVSAQNE 977
Cdd:pfam07111 516 E-------------AERQQLSEVAQQLEQELQRAQESLASVGqqlEVARQGQQESTEEAASLRQELTQQQE 573
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
602-840 |
2.61e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 2.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 602 ALGKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQNHLnhvvdglihpEEVAARVDELRKRLKLGAGEMRihsps 681
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQL----------AALERRIAALARRIRALEQELA----- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 682 dVLGKSLADLQKQFSEILARSQWEKEEAQVRERKLHEEMALQQEKLANGQEEFRQACERA--LEARIKFDK------RQH 753
Cdd:COG4942 80 -ALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLqyLKYLAPARReqaeelRAD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 754 NARIQQLENEIHYLQENLKSMEKIQGLTDLQLQEADEEKERILAQLQELEKKKKREDARSQEQFLGLDEELKSLKKAVAA 833
Cdd:COG4942 159 LAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
....*..
gi 1720399285 834 SDKLAAA 840
Cdd:COG4942 239 AAERTPA 245
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
327-636 |
2.68e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 49.52 E-value: 2.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 327 EAIQQKKISEAEKDLLLKQLSGRLQHLN---RLRQEALDLEIQMEKQRKEIAEKHEEINTVQlatdsldpkdpkhshmKA 403
Cdd:PRK11281 46 DALNKQKLLEAEDKLVQQDLEQTLALLDkidRQKEETEQLKQQLAQAPAKLRQAQAELEALK----------------DD 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 404 QKRGKEQQLDimNRQYTQLESRLDEILcriaketeeikdleQQLTDGQIAANEAlkkdlEGVISGLQEylGTIKGQATQA 483
Cdd:PRK11281 110 NDEETRETLS--TLSLRQLESRLAQTL--------------DQLQNAQNDLAEY-----NSQLVSLQT--QPERAQAALY 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 484 QNECRKLQ---------DEKETllqrLTEVQQEKEELELIAMDAEN--MRKELA---ELESALQEQH-EVNASLQQAQGD 548
Cdd:PRK11281 167 ANSQRLQQirnllkggkVGGKA----LRPSQRVLLQAEQALLNAQNdlQRKSLEgntQLQDLLQKQRdYLTARIQRLEHQ 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 549 LSAYETEL------ETQLKLKDAETSQLKQELEkllrrtqlEQSVLQTELEKEREsLRDALGKA-QSSEEKQQENNELRT 621
Cdd:PRK11281 243 LQLLQEAInskrltLSEKTVQEAQSQDEAARIQ--------ANPLVAQELEINLQ-LSQRLLKAtEKLNTLTQQNLRVKN 313
|
330
....*....|....*
gi 1720399285 622 QLKQLQDDNSLLKKQ 636
Cdd:PRK11281 314 WLDRLTQSERNIKEQ 328
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1778-1944 |
2.99e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.61 E-value: 2.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1778 QVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAgkvtLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGT-- 1855
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEA----AKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNvr 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1856 ----LQEEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDMRADFSLLRNQFLTERKKAEKQVAGLKEALK 1931
Cdd:COG1579 87 nnkeYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAERE 166
|
170
....*....|...
gi 1720399285 1932 IQRSQLEKNLLEQ 1944
Cdd:COG1579 167 ELAAKIPPELLAL 179
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1596-1937 |
3.08e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 49.57 E-value: 3.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1596 ATQQQRRELERQRQLLERDRRETERVRAESQALQscvECLSKEKEDLQGQCESWEKK----SSHAQRVLAATEESNKMEQ 1671
Cdd:COG3096 275 RHANERRELSERALELRRELFGARRQLAEEQYRL---VEMARELEELSARESDLEQDyqaaSDHLNLVQTALRQQEKIER 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1672 SNLGKLELSVRklrqeLEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLD------LAKQDLIHTTKCQN 1745
Cdd:COG3096 352 YQEDLEELTER-----LEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDvqqtraIQYQQAVQALEKAR 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1746 ELLNEQTQLQEDISKWMARLESCQKE-TETKEQQVQQLQDEiRESKLRLDQQEMMFQKLQKERERE-------------- 1810
Cdd:COG3096 427 ALCGLPDLTPENAEDYLAAFRAKEQQaTEEVLELEQKLSVA-DAARRQFEKAYELVCKIAGEVERSqawqtarellrryr 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1811 EQKFEAGKV-TLEQQQRQLEKELTDQKS--RL-----KQLLTDVSAAEGRLGTLQEEERRIEGLE----------RMLSQ 1872
Cdd:COG3096 506 SQQALAQRLqQLRAQLAELEQRLRQQQNaeRLleefcQRIGQQLDAAEELEELLAELEAQLEELEeqaaeaveqrSELRQ 585
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720399285 1873 AKQQLSEREQQLMAKSGELLALQK----------EADDMRADFSLLRNQFL---TERKKAEKQVAGLKEALKIQRSQL 1937
Cdd:COG3096 586 QLEQLRARIKELAARAPAWLAAQDalerlreqsgEALADSQEVTAAMQQLLereREATVERDELAARKQALESQIERL 663
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
5-182 |
3.26e-05 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 48.78 E-value: 3.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 5 NLGKIEGLENMCNLQKLNLAGNEIEHIPvwFAKKLKSLRVLNLKGNKISSLQdVSKLKPLQDLTSLVLIDNPVVALPHYL 84
Cdd:COG4886 239 QLTDLPELGNLTNLEELDLSNNQLTDLP--PLANLTNLKTLDLSNNQLTDLK-LKELELLLGLNSLLLLLLLLNLLELLI 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 85 QFIIFHLRSLESLEGQPVTTQDRQEAFERFSLEEIERLEKDLEKKTVETEELKNKQTKFLEEIKNQDKLNKSLKEEAMLQ 164
Cdd:COG4886 316 LLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLT 395
|
170
....*....|....*...
gi 1720399285 165 KQSCEELESDLSTKKELL 182
Cdd:COG4886 396 TTAGVLLLTLALLDAVNT 413
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1676-1994 |
3.86e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 49.19 E-value: 3.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1676 KLELSVRKLRQELEQLSQdKLALH----------SEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQdlihttKCQ- 1744
Cdd:PRK04863 804 TLSFDVQKLQRLHQAFSR-FIGSHlavafeadpeAELRQLNRRRVELERALADHESQEQQQRSQLEQAKE------GLSa 876
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1745 -NELLNEQTQLQEDisKWMARLESCQKETEtkeqQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQkfeagkvtLEQ 1823
Cdd:PRK04863 877 lNRLLPRLNLLADE--TLADRVEEIREQLD----EAEEAKRFVQQHGNALAQLEPIVSVLQSDPEQFEQ--------LKQ 942
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1824 QQRQLEKELTDQKSRlKQLLTDVSA---------AEGRLG---TLQEEER-RIEGLERMLSQAKQQLSEREQQLMAKSGE 1890
Cdd:PRK04863 943 DYQQAQQTQRDAKQQ-AFALTEVVQrrahfsyedAAEMLAknsDLNEKLRqRLEQAEQERTRAREQLRQAQAQLAQYNQV 1021
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1891 LLALQKEAD---DMRADFsllrnqfltERKKAEKQV---AGLKEALKIQRSQLEKNLLEQKQENSCMQKEMATIELvaqd 1964
Cdd:PRK04863 1022 LASLKSSYDakrQMLQEL---------KQELQDLGVpadSGAEERARARRDELHARLSANRSRRNQLEKQLTFCEA---- 1088
|
330 340 350
....*....|....*....|....*....|
gi 1720399285 1965 nheRARRLMKELSQMQQEYLELKKQVANQK 1994
Cdd:PRK04863 1089 ---EMDNLTKKLRKLERDYHEMREQVVNAK 1115
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
92-670 |
4.05e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.91 E-value: 4.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 92 RSLESLEGQPVTTQDRQEAFERfsleEIERLEKDLEKKTVETEELKNKQTKFLEEIKNQDKLN-------KSLKEEAMLQ 164
Cdd:TIGR02169 294 EKIGELEAEIASLERSIAEKER----ELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRdklteeyAELKEELEDL 369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 165 KQSCEELESDLSTKKELLKQKTVELTRACQKQYELEQELafykiDAKFEPLNYYPSEYAEIDKypdespYIGKSRYKRNM 244
Cdd:TIGR02169 370 RAELEEVDKEFAETRDELKDYREKLEKLKREINELKREL-----DRLQEELQRLSEELADLNA------AIAGIEAKINE 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 245 FATETyivsDAQAVQIRKMVPEGGQLRHehtpprvqappdlQLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQ 324
Cdd:TIGR02169 439 LEEEK----EDKALEIKKQEWKLEQLAA-------------DLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARA 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 325 LEEAIQQKKISEAEKDL-------LLKQL---------------SGRLQH----------------------------LN 354
Cdd:TIGR02169 502 SEERVRGGRAVEEVLKAsiqgvhgTVAQLgsvgeryataievaaGNRLNNvvveddavakeaiellkrrkagratflpLN 581
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 355 RLRQEALDLEIQMEK------------------------------QRKEIAEKHE-EINTVQLATDSLDP---------K 394
Cdd:TIGR02169 582 KMRDERRDLSILSEDgvigfavdlvefdpkyepafkyvfgdtlvvEDIEAARRLMgKYRMVTLEGELFEKsgamtggsrA 661
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 395 DPKHSHMKAQKRGKEQQL----DIMNRQYTQLESRLDEILCRIAKETEEIKDLEQQLtdgqiaanEALKKDLEgvisGLQ 470
Cdd:TIGR02169 662 PRGGILFSRSEPAELQRLrerlEGLKRELSSLQSELRRIENRLDELSQELSDASRKI--------GEIEKEIE----QLE 729
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 471 EYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELELiamDAENMRKELAELESALQEQhevnaSLQQAQGDLS 550
Cdd:TIGR02169 730 QEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEE---DLHKLEEALNDLEARLSHS-----RIPEIQAELS 801
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 551 ayetELETQLKLKDAETSQLKQELEKLLRRTQLEQSVLQTELEKER--ESLRDALGKAQSS-----EEKQQENNELRTQL 623
Cdd:TIGR02169 802 ----KLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIdlKEQIKSIEKEIENlngkkEELEEELEELEAAL 877
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 1720399285 624 KQLQDDNSLLKKQLKEFQNHLNHVVDGLihpEEVAARVDELRKRLKL 670
Cdd:TIGR02169 878 RDLESRLGDLKKERDELEAQLRELERKI---EELEAQIEKKRKRLSE 921
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
438-639 |
4.73e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.47 E-value: 4.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 438 EEIKDLEQQLTDGQIAANEALKKD-LEGVISGLQEYLGTIKGQATQAQNECRK---------LQDEKETLLQRLTEVQQE 507
Cdd:COG3206 148 ELAAAVANALAEAYLEQNLELRREeARKALEFLEEQLPELRKELEEAEAALEEfrqknglvdLSEEAKLLLQQLSELESQ 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 508 KEELELIAMDAENMRKEL-AELESALQEQHEVNAS--LQQAQGDLSAYETELETQL---------------KLKDAEtSQ 569
Cdd:COG3206 228 LAEARAELAEAEARLAALrAQLGSGPDALPELLQSpvIQQLRAQLAELEAELAELSarytpnhpdvialraQIAALR-AQ 306
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 570 LKQELEKLLRRTQLEQSVLQTELEKERESLRDALGKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKE 639
Cdd:COG3206 307 LQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEE 376
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
286-515 |
5.02e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 48.47 E-value: 5.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 286 QLEDTEKKISAAQTRLsELHHEIETAEQKVLRATQEFKQ------LEEAIQQK-KISEAEKDL--LLKQLSGRLQHLNRL 356
Cdd:PHA02562 182 QIQTLDMKIDHIQQQI-KTYNKNIEEQRKKNGENIARKQnkydelVEEAKTIKaEIEELTDELlnLVMDIEDPSAALNKL 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 357 RQEALDLEIQMEKQRKEIaEKHEEINTVQLATDSLDPKDPKHSHMKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKE 436
Cdd:PHA02562 261 NTAAAKIKSKIEQFQKVI-KMYEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKL 339
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720399285 437 TEEIKDLEQQltDGQIAANEALKKDLEGVISGLQEYLGTIKGqatqaqnECRKLQDEKETLLQRLTEVQQEKEELELIA 515
Cdd:PHA02562 340 LELKNKISTN--KQSLITLVDKAKKVKAAIEELQAEFVDNAE-------ELAKLQDELDKIVKTKSELVKEKYHRGIVT 409
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
286-644 |
5.42e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 48.63 E-value: 5.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 286 QLEDTEKKISAAQTRLSELHHEIETAEQKVlratqefkQLEEAIQQKKISEAEKD-LLLKQLSGRLQHLNRLRQEAL--- 361
Cdd:pfam01576 93 QLQNEKKKMQQHIQDLEEQLDEEEAARQKL--------QLEKVTTEAKIKKLEEDiLLLEDQNSKLSKERKLLEERIsef 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 362 --DLEIQMEKQRKEIAEKHEEINTVQLATDSLDPKDPKHSHMKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEE 439
Cdd:pfam01576 165 tsNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEE 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 440 IKDLEQQLTDGQIAANEALKK--DLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRL------TEVQQE---K 508
Cdd:pfam01576 245 LQAALARLEEETAQKNNALKKirELEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELedtldtTAAQQElrsK 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 509 EELELI----AMDAENMRKE-------------LAELESALQEQHEVNASLQQAQGDLSAYETELETQLKLkdaeTSQLK 571
Cdd:pfam01576 325 REQEVTelkkALEEETRSHEaqlqemrqkhtqaLEELTEQLEQAKRNKANLEKAKQALESENAELQAELRT----LQQAK 400
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720399285 572 QELEKLLRRTQLEQSVLQ---TELEKERESLRDALGKAQSSEEKQQEN-NELRTQLKQLQDDNSLLKKQLKEFQNHL 644
Cdd:pfam01576 401 QDSEHKRKKLEGQLQELQarlSESERQRAELAEKLSKLQSELESVSSLlNEAEGKNIKLSKDVSSLESQLQDTQELL 477
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
565-813 |
6.55e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 6.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 565 AETSQLKQELEKLLRRTQLEQSVLQtELEKERESLRDALGKAQSS-EEKQQENNELRTQLKQLQDDNSLLKKQLKEFQNH 643
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELA-ALKKEEKALLKQLAALERRiAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 644 LnhvvdglihpeevAARVDELRKRLKLgAGEMRIHSPSDVLGKsladlQKQFSEILARSQWEKEEAQVRERKLhEEMALQ 723
Cdd:COG4942 99 L-------------EAQKEELAELLRA-LYRLGRQPPLALLLS-----PEDFLDAVRRLQYLKYLAPARREQA-EELRAD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 724 QEKLANGQEEFRQAceralEARIKFDKRQHNARIQQLENEIHYLQENLKSMEKIQGLTDLQLQEADEEKERILAQLQELE 803
Cdd:COG4942 159 LAELAALRAELEAE-----RAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
250
....*....|
gi 1720399285 804 KKKKREDARS 813
Cdd:COG4942 234 AEAAAAAERT 243
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1379-1903 |
6.65e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 48.18 E-value: 6.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1379 KDADFQCLNEKKEKLTEELQ----SLQRDIKAAQHSEDHHLQVLRESETLLQAKRAELET--------------LKSQVT 1440
Cdd:pfam05483 280 QDENLKELIEKKDHLTKELEdikmSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEElnkakaahsfvvteFEATTC 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1441 SQQQELAVLDSELGHRREELLLLQDSLAQAKADLQEALTL---GETEVAEKCSHIREVKSLLEElSFQKGELNVHISEKK 1517
Cdd:pfam05483 360 SLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFknnKEVELEELKKILAEDEKLLDE-KKQFEKIAEELKGKE 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1518 TQLALIQQEMEKEEKNLQVVLQQL-SRHKTELKNVADI-LQLETSELQGLKLQHDQKVVELEKAQV--DVLEEKLELENL 1593
Cdd:pfam05483 439 QELIFLLQAREKEIHDLEIQLTAIkTSEEHYLKEVEDLkTELEKEKLKNIELTAHCDKLLLENKELtqEASDMTLELKKH 518
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1594 QQATQQQRRELERQRQLLERDRRETERVRAEsqaLQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSN 1673
Cdd:pfam05483 519 QEDIINCKKQEERMLKQIENLEEKEMNLRDE---LESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENK 595
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1674 LGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQdhldlakqdlihttkcqnellneqtq 1753
Cdd:pfam05483 596 CNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAK-------------------------- 649
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1754 lqediSKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQemmfQKLQKEREREEQKFEAGKVTL-EQQQRQLEKEL 1832
Cdd:pfam05483 650 -----QKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEA----VKLQKEIDKRCQHKIAEMVALmEKHKHQYDKII 720
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720399285 1833 TDQKSRLKQLLTDVsaaegrlgtlQEEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDMRA 1903
Cdd:pfam05483 721 EERDSELGLYKNKE----------QEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKENTA 781
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1683-1848 |
6.86e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 46.46 E-value: 6.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1683 KLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTtkcqNELLNEQTQLQEDISKwm 1762
Cdd:COG1579 14 ELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEV----EARIKKYEEQLGNVRN-- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1763 AR-LESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQ 1841
Cdd:COG1579 88 NKeYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREE 167
|
....*..
gi 1720399285 1842 LLTDVSA 1848
Cdd:COG1579 168 LAAKIPP 174
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
1388-1904 |
7.06e-05 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 48.26 E-value: 7.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1388 EKKEKLTEELQSLQRDIKAAQHSEDHHLQVLRESetlLQAKRAELETLKSQVTSQQQELAVLDselghRREELLLLQDSL 1467
Cdd:PRK10246 191 EQHKSARTELEKLQAQASGVALLTPEQVQSLTAS---LQVLTDEEKQLLTAQQQQQQSLNWLT-----RLDELQQEASRR 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1468 AQAKADLQEALT-----LGETEVAEKCSHIR-------EVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEKNLQ 1535
Cdd:PRK10246 263 QQALQQALAAEEkaqpqLAALSLAQPARQLRphweriqEQSAALAHTRQQIEEVNTRLQSTMALRARIRHHAAKQSAELQ 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1536 VVLQQLSRHKTElknvADILQLETSELQGLKLQHDQ--------------------KVVELEKAQVDVLEEKLELENLQQ 1595
Cdd:PRK10246 343 AQQQSLNTWLAE----HDRFRQWNNELAGWRAQFSQqtsdreqlrqwqqqlthaeqKLNALPAITLTLTADEVAAALAQH 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1596 ATQQQRRE----LERQRQLLERDRRETERVRAESQALQSCVECLSKEKE-----------DLQGQCESWEK-KSSHAQRV 1659
Cdd:PRK10246 419 AEQRPLRQrlvaLHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRqrykektqqlaDVKTICEQEARiKDLEAQRA 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1660 ---------LAATEESNKMEQSNlgKLELSVRKLR-----QELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEElds 1725
Cdd:PRK10246 499 qlqagqpcpLCGSTSHPAVEAYQ--ALEPGVNQSRldaleKEVKKLGEEGAALRGQLDALTKQLQRDESEAQSLRQE--- 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1726 tQDHLDLAKQDLIHTtkcqnelLNEQTQLQEDISKWMarlescqKETETKEQQVQQLqdeiresklrldQQEMMFQKLQK 1805
Cdd:PRK10246 574 -EQALTQQWQAVCAS-------LNITLQPQDDIQPWL-------DAQEEHERQLRLL------------SQRHELQGQIA 626
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1806 EREREEQKFEAgkvTLEQQQRQLEKELTdqksRLKQLLTDVSAAEGRLGTLQEEERRIeglermlsQAKQQLSEREQQLM 1885
Cdd:PRK10246 627 AHNQQIIQYQQ---QIEQRQQQLLTALA----GYALTLPQEDEEASWLATRQQEAQSW--------QQRQNELTALQNRI 691
|
570
....*....|....*....
gi 1720399285 1886 AKSGELLALQKEADDMRAD 1904
Cdd:PRK10246 692 QQLTPLLETLPQSDDLPHS 710
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1177-1571 |
7.11e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 48.11 E-value: 7.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1177 RLEDIMQHLKSKQREERRQKASTQHSEEEVDGLHRDIDDL-------LQEKKELELEVEELHRTIERHQQRKDFIDGHVE 1249
Cdd:PRK02224 315 RREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLeeraeelREEAAELESELEEAREAVEDRREEIEELEEEIE 394
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1250 NLMTELE------------IEKSLKHHEDIVDEIECLEKTLLKRRSELREADRLLAE----------AENELACTKEKTK 1307
Cdd:PRK02224 395 ELRERFGdapvdlgnaedfLEELREERDELREREAELEATLRTARERVEEAEALLEAgkcpecgqpvEGSPHVETIEEDR 474
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1308 SAVEKFTDAkrnLLQTESDAEALEKRAqETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEinkvvaaKDADFQCLN 1387
Cdd:PRK02224 475 ERVEELEAE---LEDLEEEVEEVEERL-ERAEDLVEAEDRIERLEERREDLEELIAERRETIEE-------KRERAEELR 543
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1388 EKKEKLTEELQSlQRDIKAAQHSE-DHHLQVLRESETLLQAKRAELETLKsQVTSQQQELAVLDSELGHRREELlllqds 1466
Cdd:PRK02224 544 ERAAELEAEAEE-KREAAAEAEEEaEEAREEVAELNSKLAELKERIESLE-RIRTLLAAIADAEDEIERLREKR------ 615
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1467 laqakADLQEALTLGETEVAEKCSHIREVKSLLEELSFQKGElnvhisEKKTQLALIQQEMEKEeknlqvvLQQLSRHKT 1546
Cdd:PRK02224 616 -----EALAELNDERRERLAEKRERKRELEAEFDEARIEEAR------EDKERAEEYLEQVEEK-------LDELREERD 677
|
410 420
....*....|....*....|....*
gi 1720399285 1547 ELKNVADILQLETSELQGLKLQHDQ 1571
Cdd:PRK02224 678 DLQAEIGAVENELEELEELRERREA 702
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
369-902 |
7.13e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 47.97 E-value: 7.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 369 KQRKEIAEKHEEINTVQL-------ATDSLDPKDPKHSHMKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIK 441
Cdd:PRK01156 149 AQRKKILDEILEINSLERnydklkdVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYN 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 442 DLEQQLtdgqIAANEALKK--DLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETlLQRLTEVQQEKEELELIAM--- 516
Cdd:PRK01156 229 NAMDDY----NNLKSALNElsSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEER-HMKIINDPVYKNRNYINDYfky 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 517 --DAENMRKELAELESALQEQHEVNASLQQAQGDLSAYE-------------TELET-------------QLKLKDAETS 568
Cdd:PRK01156 304 knDIENKKQILSNIDAEINKYHAIIKKLSVLQKDYNDYIkkksryddlnnqiLELEGyemdynsylksieSLKKKIEEYS 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 569 QLKQELEKLLRRTQLEQSVLQTELEKERESLRDALGKAQSS-EEKQQENNELRTQLKQLQDDNSLLKKQ----------- 636
Cdd:PRK01156 384 KNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKvSSLNQRIRALRENLDELSRNMEMLNGQsvcpvcgttlg 463
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 637 -------LKEFQNHLNHVVDGLIHPEEVAARVDELRKRLK-----LGAGEMRIHSPSDVLGKSL-ADLQKQFSEI--LAR 701
Cdd:PRK01156 464 eeksnhiINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKkrkeyLESEEINKSINEYNKIESArADLEDIKIKIneLKD 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 702 SQWEKEEAQVRERKLHeemalqQEKLANGQEEFRQACERALEARIKFDKRQHNARIQQLENEIHYLQENLKSMEKIQGLT 781
Cdd:PRK01156 544 KHDKYEEIKNRYKSLK------LEDLDSKRTSWLNALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYI 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 782 DLQLQEADEEKERILAQLQELEKKKKREDArsqeqflgLDEELKSLKKAVAASD------KLAAAELTIAKDQLKSLHGT 855
Cdd:PRK01156 618 DKSIREIENEANNLNNKYNEIQENKILIEK--------LRGKIDNYKKQIAEIDsiipdlKEITSRINDIEDNLKKSRKA 689
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 1720399285 856 VVRINQERAEE-------LQEAERFSREAMQAAKDLSRAEAEIELLQHLLRERE 902
Cdd:PRK01156 690 LDDAKANRARLestieilRTRINELSDRINDINETLESMKKIKKAIGDLKRLRE 743
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1464-1671 |
8.80e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 8.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1464 QDSLAQAKADLQEALTLGETEVAEKCSHIREVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEKNLQVVLQQLSR 1543
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1544 HKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQLLERDRRETERVRA 1623
Cdd:COG4942 102 QKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLA 181
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1720399285 1624 ESQALQSCVECLSKEKEDLQGQCESweKKSSHAQRVLAATEESNKMEQ 1671
Cdd:COG4942 182 ELEEERAALEALKAERQKLLARLEK--ELAELAAELAELQQEAEELEA 227
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1171-1999 |
8.99e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 47.86 E-value: 8.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1171 LENEVSRLEDIMQHLKSKQREErrqkastqhsEEEVDGLHRDIDDLLQEKKELELEVEELHRTIERHQQRKDFIDGHVEn 1250
Cdd:pfam01576 66 LAARKQELEEILHELESRLEEE----------EERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIK- 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1251 lmtelEIEKSLKHHEDIVDEIECLEKTLLKRRSELreADRLLAEAENELACTKEKTKSAVeKFTDAKRNLLQTESDAEAL 1330
Cdd:pfam01576 135 -----KLEEDILLLEDQNSKLSKERKLLEERISEF--TSNLAEEEEKAKSLSKLKNKHEA-MISDLEERLKKEEKGRQEL 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1331 EKRAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEELQSLQRDIKAAQHS 1410
Cdd:pfam01576 207 EKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1411 EDHHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQAKADLQEALTLGETEVAEKCS 1490
Cdd:pfam01576 287 RNKAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLE 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1491 HIREVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEKNLQVVLQQLS-------RHKTELKNVADILQLETSELQ 1563
Cdd:pfam01576 367 QAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQarlseseRQRAELAEKLSKLQSELESVS 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1564 GLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQR-------RELERQR----QLLERDRRETERVRAESQALQSCV 1632
Cdd:pfam01576 447 SLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKlnlstrlRQLEDERnslqEQLEEEEEAKRNVERQLSTLQAQL 526
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1633 ECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQ----- 1707
Cdd:pfam01576 527 SDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKkqkkf 606
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1708 -QLQGKQEAIN----------------------SLQEELDSTQDhldlAKQDLIHTTKCQNELLNEQTQLQEDISKWMAR 1764
Cdd:pfam01576 607 dQMLAEEKAISaryaeerdraeaeareketralSLARALEEALE----AKEELERTNKQLRAEMEDLVSSKDDVGKNVHE 682
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1765 LESCQKETETKEQ----QVQQLQDEIRES---KLRLDQQeMMFQKLQKERE---REEQKfEAGKVTLEQQQRQLEKELTD 1834
Cdd:pfam01576 683 LERSKRALEQQVEemktQLEELEDELQATedaKLRLEVN-MQALKAQFERDlqaRDEQG-EEKRRQLVKQVRELEAELED 760
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1835 QKsrlKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSEREQQLMaksgellALQKEADDMRADfsllRNQFLT 1914
Cdd:pfam01576 761 ER---KQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKLQAQMK-------DLQRELEEARAS----RDEILA 826
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1915 ERKKAEKQVAGLK-EALKIQR--SQLEKNLLEQKQENSCMQKEMATIELVAQDNHERARRLMKELSQMQQEYLELKKQVA 1991
Cdd:pfam01576 827 QSKESEKKLKNLEaELLQLQEdlAASERARRQAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTE 906
|
....*...
gi 1720399285 1992 NQKDLERR 1999
Cdd:pfam01576 907 LLNDRLRK 914
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
283-867 |
9.89e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 47.77 E-value: 9.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 283 PDLQLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLKQLSGRLQHLNRLRQEALD 362
Cdd:COG5022 866 KETIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEFKTELIARLKKLLNNIDLEEG 945
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 363 LEIQMEKQrKEIAEKHEEINTVQLATDSLDPKDPKHSHMKAQKRGKEQQLDIMNRQYTQLESRLDeilcRIAKETEEIKD 442
Cdd:COG5022 946 PSIEYVKL-PELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYG----ALQESTKQLKE 1020
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 443 LEQQLT--------DGQIAANEALKKDLEGVISGLqeylgTIKGQATQAQNECRKLQDEKETLLQRLTEVQQ--EKEELE 512
Cdd:COG5022 1021 LPVEVAelqsaskiISSESTELSILKPLQKLKGLL-----LLENNQLQARYKALKLRRENSLLDDKQLYQLEstENLLKT 1095
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 513 LIAMDAENMRKELAELESALQ----------EQHEVNASLQQAQGDLSAYETELETQLKLKD--AETSQLKQELEKLLRR 580
Cdd:COG5022 1096 INVKDLEVTNRNLVKPANVLQfivaqmiklnLLQEISKFLSQLVNTLEPVFQKLSVLQLELDglFWEANLEALPSPPPFA 1175
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 581 TQLEQSVLQTELEKEReslrdalgkaqsSEEKQQENNELRTQLKQLQD---DNSLLKKQLKEFQNHlnhvvdgLIHPEEV 657
Cdd:COG5022 1176 ALSEKRLYQSALYDEK------------SKLSSSEVNDLKNELIALFSkifSGWPRGDKLKKLISE-------GWVPTEY 1236
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 658 AARVDELRKRLKlgagemrihSPSDVLGKSLADLQKQFSEILARSQWEKEEAQVRERKLHEEMalQQEKLANGQEEFRQA 737
Cdd:COG5022 1237 STSLKGFNNLNK---------KFDTPASMSNEKLLSLLNSIDNLLSSYKLEEEVLPATINSLL--QYINVGLFNALRTKA 1305
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 738 CERALEARIKFDKRQHNARIQQLENEIHYLQENLKSMEKIQGLtdLQLQEADEEKERILAQLQELEKKKKREDARSQEQF 817
Cdd:COG5022 1306 SSLRWKSATEVNYNSEELDDWCREFEISDVDEELEELIQAVKV--LQLLKDDLNKLDELLDACYSLNPAEIQNLKSRYDP 1383
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 1720399285 818 LGLDEEL-KSLKKAVAAsdKLAAAELTIAKDQLKSLHGTVVRINQERAEEL 867
Cdd:COG5022 1384 ADKENNLpKEILKKIEA--LLIKQELQLSLEGKDETEVHLSEIFSEEKSLI 1432
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1274-1434 |
1.01e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 46.07 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1274 LEKTLLKRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEKRAQ--ETALNLVKAEQQLRLL 1351
Cdd:COG1579 15 LDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKkyEEQLGNVRNNKEYEAL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1352 QADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEELQSLQRDIKAAqhsedhhLQVLRESETLLQAKRAE 1431
Cdd:COG1579 95 QKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEE-------LAELEAELEELEAEREE 167
|
...
gi 1720399285 1432 LET 1434
Cdd:COG1579 168 LAA 170
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
519-853 |
1.06e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 47.53 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 519 ENMRKELAELESALQEQHEVNASLQQAQGDLSAYETELetQLKLKDAETSqLKQELEKLLRRTQLEQSvLQTELEKERES 598
Cdd:pfam12128 600 EELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKA--SREETFARTA-LKNARLDLRRLFDEKQS-EKDKKNKALAE 675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 599 LRDALGKAQSSEEKQQENNELRTQ--LKQLQDDNSLLKKQLKEFQNHLNHVVDGLIH--PEEVAARVDELRKRLKLGAGE 674
Cdd:pfam12128 676 RKDSANERLNSLEAQLKQLDKKHQawLEEQKEQKREARTEKQAYWQVVEGALDAQLAllKAAIAARRSGAKAELKALETW 755
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 675 M-RIHSPSDVLGKSLADLQKQFSEILAR-SQWEKEEAQVRE--RKLHEEMALQQEKLANGQEEFRQACER------ALEA 744
Cdd:pfam12128 756 YkRDLASLGVDPDVIAKLKREIRTLERKiERIAVRRQEVLRyfDWYQETWLQRRPRLATQLSNIERAISElqqqlaRLIA 835
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 745 RIKFDKRQHNARIQQLENEIHYLQENLKSME-KIQGLTDLQL----QEADEEKERILAQLQELEKKKKREdARSQEQFLg 819
Cdd:pfam12128 836 DTKLRRAKLEMERKASEKQQVRLSENLRGLRcEMSKLATLKEdansEQAQGSIGERLAQLEDLKLKRDYL-SESVKKYV- 913
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1720399285 820 ldEELKSLKKAVAAS------DKLAAAELTIAKDQLKSLH 853
Cdd:pfam12128 914 --EHFKNVIADHSGSglaetwESLREEDHYQNDKGIRLLD 951
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1171-1811 |
1.11e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 47.37 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1171 LENEVSRLEDIMQHLKSKQREERRQKASTQHSEEEVDGLHRDIDDLLQEKKELELEVEELHRTIErhqqrkdfidghven 1250
Cdd:PRK03918 160 YENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELE--------------- 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1251 lmtelEIEKSLKHHEDIVDEIECLEKTLLKRRSELREADRLLAEAENELactkEKTKSAVEKFTDAKRNLLQTESDAEAL 1330
Cdd:PRK03918 225 -----KLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERI----EELKKEIEELEEKVKELKELKEKAEEY 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1331 EKRAQEtalnLVKAEQQLRLLQADAEDLEQHKIKQEEILKEINKvvaakdadfqcLNEKKEKLTEELQSLQRDikaaqhs 1410
Cdd:PRK03918 296 IKLSEF----YEEYLDELREIEKRLSRLEEEINGIEERIKELEE-----------KEERLEELKKKLKELEKR------- 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1411 edhhLQVLRESETLLQ---AKRAELETLKSQVTsqqqelavldselGHRREELLLLQDSLAQAKADLQEALTLGETEVAE 1487
Cdd:PRK03918 354 ----LEELEERHELYEeakAKKEELERLKKRLT-------------GLTPEKLEKELEELEKAKEEIEEEISKITARIGE 416
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1488 KCSHIREVKSLLEELSFQKGELNV---HISE--KKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSEL 1562
Cdd:PRK03918 417 LKKEIKELKKAIEELKKAKGKCPVcgrELTEehRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELI 496
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1563 QGLKLQHDQKVVELEKAQVDVLeeklelenlqqatqqqrrELERQRQLLERDRRETERVRAESQALQSCVEclskEKEDL 1642
Cdd:PRK03918 497 KLKELAEQLKELEEKLKKYNLE------------------ELEKKAEEYEKLKEKLIKLKGEIKSLKKELE----KLEEL 554
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1643 QGQCESWEKKSSHAQRVLAatEESNKMEQSNLGKLELSVRKLrQELEQLSQDKLALHSevaeVQQQLQGKQEAINSLQEE 1722
Cdd:PRK03918 555 KKKLAELEKKLDELEEELA--ELLKELEELGFESVEELEERL-KELEPFYNEYLELKD----AEKELEREEKELKKLEEE 627
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1723 LDSTQDHLDLAKQDLIHTTKCQNELLNEQTQ--------LQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLD 1794
Cdd:PRK03918 628 LDKAFEELAETEKRLEELRKELEELEKKYSEeeyeelreEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEERE 707
|
650
....*....|....*..
gi 1720399285 1795 QQEMMFQKLQKEREREE 1811
Cdd:PRK03918 708 KAKKELEKLEKALERVE 724
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1365-2053 |
1.13e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 47.53 E-value: 1.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1365 QEEILKEINKVVAAKDADfqcLNEKKEKLTEELQSLQRDIKAAQHsedhhlQVLRESETLLQAKRAELETLKSQvtsqQQ 1444
Cdd:pfam12128 281 RQETSAELNQLLRTLDDQ---WKEKRDELNGELSAADAAVAKDRS------ELEALEDQHGAFLDADIETAAAD----QE 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1445 ELAVLDSELGHRREELLLLQDSlaqaKADLQEALTLGETEVAEKCShiREVKSLLEELSFQKgelnvhiSEKKTQLALIQ 1524
Cdd:pfam12128 348 QLPSWQSELENLEERLKALTGK----HQDVTAKYNRRRSKIKEQNN--RDIAGIKDKLAKIR-------EARDRQLAVAE 414
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1525 QEMEKEEKNLQvvlQQLSRHKTELKNVADILQLETSELQG----------LKLQHDQKVVELEKAQVDVLEEKLELENLQ 1594
Cdd:pfam12128 415 DDLQALESELR---EQLEAGKLEFNEEEYRLKSRLGELKLrlnqatatpeLLLQLENFDERIERAREEQEAANAEVERLQ 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1595 QATQQQRRELERQRQLLERDRRETERVRAESQALQ--------SCVECLSKEKEDLQgqcESWEKKSSHAQrvLAATEES 1666
Cdd:pfam12128 492 SELRQARKRRDQASEALRQASRRLEERQSALDELElqlfpqagTLLHFLRKEAPDWE---QSIGKVISPEL--LHRTDLD 566
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1667 NKMEQSNLGKlELSVRKLRQELEQLSqdklalHSEVAEVQQQLQGKqeaINSLQEELDSTQDhldlakqdlihttkcqne 1746
Cdd:pfam12128 567 PEVWDGSVGG-ELNLYGVKLDLKRID------VPEWAASEEELRER---LDKAEEALQSARE------------------ 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1747 llnEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIResklRL-DQQEMMFQKLQKEREREEQKFEAGKVTLEQQQ 1825
Cdd:pfam12128 619 ---KQAAAEEQLVQANGELEKASREETFARTALKNARLDLR----RLfDEKQSEKDKKNKALAERKDSANERLNSLEAQL 691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1826 RQLEKELTDQKSRLKQlltdvSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSEREQQLMAksgELLALQKEaddmradf 1905
Cdd:pfam12128 692 KQLDKKHQAWLEEQKE-----QKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKA---ELKALETW-------- 755
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1906 sllRNQFLTERKKAEKQVAGLKEALKIqrsqleknlLEQKQENsCMQKEMATIELVAQDNHE---RARRLMKELSQMQQE 1982
Cdd:pfam12128 756 ---YKRDLASLGVDPDVIAKLKREIRT---------LERKIER-IAVRRQEVLRYFDWYQETwlqRRPRLATQLSNIERA 822
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720399285 1983 YLELKKQVAN-QKDLERR------QMEVSDAMRTLKSEVKDEIRTSLRNLNQFLPELPADLASiLERNENLRELESLK 2053
Cdd:pfam12128 823 ISELQQQLARlIADTKLRraklemERKASEKQQVRLSENLRGLRCEMSKLATLKEDANSEQAQ-GSIGERLAQLEDLK 899
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1387-1641 |
1.13e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 1.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1387 NEKKEKLTEELQSLQRDIKAAQhsedhhlQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRREELLLLQDS 1466
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELE-------KELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1467 LAQAKADLQEaltlgetevaekcshirevksLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEKNLQVvLQQLSRhkt 1546
Cdd:COG4942 92 IAELRAELEA---------------------QKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQY-LKYLAP--- 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1547 ELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQrqlLERDRRETERVRAESQ 1626
Cdd:COG4942 147 ARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKE---LAELAAELAELQQEAE 223
|
250
....*....|....*
gi 1720399285 1627 ALQSCVECLSKEKED 1641
Cdd:COG4942 224 ELEALIARLEAEAAA 238
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1682-1939 |
1.15e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 47.32 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1682 RKLRQELEQLS----QDKLaLHSEVAEVQQQLQGKQEAINSLQEELDStqdhldlakqdlihttkcQNELLNEQTQLQ-E 1756
Cdd:PHA02562 153 RKLVEDLLDISvlseMDKL-NKDKIRELNQQIQTLDMKIDHIQQQIKT------------------YNKNIEEQRKKNgE 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1757 DISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKER----------EREEQKFEAGKV------T 1820
Cdd:PHA02562 214 NIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSAALNKLNTAAakikskieqfQKVIKMYEKGGVcptctqQ 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1821 LEQQQRQLEKeLTDQKS----RLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSereqqlmaksgellALQK 1896
Cdd:PHA02562 294 ISEGPDRITK-IKDKLKelqhSLEKLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQSLI--------------TLVD 358
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1720399285 1897 EADDMRADFSLLRNQFLTERKKAEKQVAGLKEaLKIQRSQLEK 1939
Cdd:PHA02562 359 KAKKVKAAIEELQAEFVDNAEELAKLQDELDK-IVKTKSELVK 400
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
288-587 |
1.30e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 47.25 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 288 EDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQ--KKISEAEKdLLLKQLSGRLQHLNRLRQEALDLEI 365
Cdd:COG3096 832 PDPEAELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLlnKLLPQANL-LADETLADRLEELREELDAAQEAQA 910
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 366 QMEKQRKEIAEKHEEINTVQlatdsldpKDPkhshmkaqkrgkeQQLDIMNRQYTQLESRLDEILCRIAKETEEIK---- 441
Cdd:COG3096 911 FIQQHGKALAQLEPLVAVLQ--------SDP-------------EQFEQLQADYLQAKEQQRRLKQQIFALSEVVQrrph 969
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 442 ----DLEQQLTDGQiAANEALKKDLEGV---ISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELElI 514
Cdd:COG3096 970 fsyeDAVGLLGENS-DLNEKLRARLEQAeeaRREAREQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQELEELG-V 1047
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720399285 515 AMDAEnmrkelAElESALQEQHEVNASLQQAQGDLSayetELETQLKLKDAETSQLKQELEKLLR-----RTQLEQSV 587
Cdd:COG3096 1048 QADAE------AE-ERARIRRDELHEELSQNRSRRS----QLEKQLTRCEAEMDSLQKRLRKAERdykqeREQVVQAK 1114
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1675-1861 |
1.35e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.07 E-value: 1.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1675 GKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHttkcqNELLNEQTQL 1754
Cdd:COG4717 63 GRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQL-----LPLYQELEAL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1755 QEDISKWMARLESCQ---KETETKEQQVQQLQDEIRESKLRLDQQEmmfQKLQKEREREEQKFEAGKVTLEQQQRQLEKE 1831
Cdd:COG4717 138 EAELAELPERLEELEerlEELRELEEELEELEAELAELQEELEELL---EQLSLATEEELQDLAEELEELQQRLAELEEE 214
|
170 180 190
....*....|....*....|....*....|
gi 1720399285 1832 LTDQKSRLKQLLTDVSAAEGRLGTLQEEER 1861
Cdd:COG4717 215 LEEAQEELEELEEELEQLENELEAAALEER 244
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1343-2101 |
1.37e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 47.09 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1343 KAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNE---KKEKLTEELQSLQRDIKAaqHSEDHHLQVLR 1419
Cdd:pfam01576 149 KLSKERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEErlkKEEKGRQELEKAKRKLEG--ESTDLQEQIAE 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1420 esetllqaKRAELETLKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQAKADLQEALTLGETEVAEKCSHIREVKSLL 1499
Cdd:pfam01576 227 --------LQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLG 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1500 EELSFQKGELNVHI----------SEKKTQLALIQQEMEKEEKNLQVVLQQLS-RHKTELKNVADilQLETSELQGLKLQ 1568
Cdd:pfam01576 299 EELEALKTELEDTLdttaaqqelrSKREQEVTELKKALEEETRSHEAQLQEMRqKHTQALEELTE--QLEQAKRNKANLE 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1569 HDQKVVELEKAqvDVLEEKLELENLQQATQQQRRELERQRQLLERDRRETERVRAEsqaLQSCVECLSKEKEDLQGQCES 1648
Cdd:pfam01576 377 KAKQALESENA--ELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAE---LAEKLSKLQSELESVSSLLNE 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1649 WEKKSSHAQRVLAATEESNKMEQsnlgklELSVRKLRQELeQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQD 1728
Cdd:pfam01576 452 AEGKNIKLSKDVSSLESQLQDTQ------ELLQEETRQKL-NLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQA 524
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1729 HLDLAKQDLIHTTKCQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQK--- 1805
Cdd:pfam01576 525 QLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKkqk 604
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1806 ------------------EREREEQKFEAGKVTLEQQQRQLE------KELTDQKSRLKQLLTDVSAAEGRLG-TLQEEE 1860
Cdd:pfam01576 605 kfdqmlaeekaisaryaeERDRAEAEAREKETRALSLARALEealeakEELERTNKQLRAEMEDLVSSKDDVGkNVHELE 684
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1861 RRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDMRADFSL---LRNQFLTERKKA-EKQVAGLKEALKIQRSQ 1936
Cdd:pfam01576 685 RSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNMQALKAQFERdlqARDEQGEEKRRQlVKQVRELEAELEDERKQ 764
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1937 LEKNLLEQKQENSCMQKEMATIELVAQDNHERARRLMKELSQMQQEYLELKKQVANQKDLERRQMEVSDAMRTLKSEV-- 2014
Cdd:pfam01576 765 RAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELlq 844
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 2015 -KDEIRTSLR---NLNQFLPELPADLASILERNENLRELESLKENFPFTTKERIFEEKSNfpqVHIMDEHWR-------- 2082
Cdd:pfam01576 845 lQEDLAASERarrQAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSN---TELLNDRLRkstlqveq 921
|
810 820 830
....*....|....*....|....*....|...
gi 1720399285 2083 --------------GEALRQRLRRHEDQLKAQL 2101
Cdd:pfam01576 922 lttelaaerstsqkSESARQQLERQNKELKAKL 954
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
319-944 |
1.63e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.89 E-value: 1.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 319 TQEFKQLEEAIQQK-KISEAEKDLLLKQLSGRLQHLNRLRQEALDLEIQMEKQRKEIAEkheeintVQLATDSLDPKDPK 397
Cdd:pfam02463 165 SRLKRKKKEALKKLiEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEE-------EYLLYLDYLKLNEE 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 398 HSHMKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKDLEQQLTDGQIAANEALKKDLEGvisgLQEYLGTIK 477
Cdd:pfam02463 238 RIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLK----LERRKVDDE 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 478 GQATQAQNECRKLQDEKETLLQRLTEVQQEKEELELIAMDAENMRKELAELESALQEQHEVNASLQQAQGDLSAYETELE 557
Cdd:pfam02463 314 EKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 558 TQLKLKDAETSQLKQELEKLLRRTQLEQSVLQTELEKERESLRDALGKAQSSEEKQQENNELRTQLKQ-LQDDNSLLKKQ 636
Cdd:pfam02463 394 EEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLkDELELKKSEDL 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 637 LKEFQNHLNHVVDGLIHPEEVAARVDELRKRLKLGAGEMRIHSPSDVLGKSLADLQKQFSEILARSQWEKEEAQVRERKL 716
Cdd:pfam02463 474 LKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEV 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 717 HEEMALQQEKLANGQEEFRQACERALEARIKFDKRQHNARIQQLE-NEIHYLQENLKSMEKIQGLTDLQLQEADEEKERI 795
Cdd:pfam02463 554 SATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEiDPILNLAQLDKATLEADEDDKRAKVVEGILKDTE 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 796 LAQLQELEKKKKREDARSQEQFLGLDEELKSLKKAVAASDKLAAAELTIAKDQLKSLHGTVVRINQERAEELQEAERFSR 875
Cdd:pfam02463 634 LTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELK 713
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720399285 876 EAMQA-----AKDLSRAEAEIELLQHLLREREGQFRDEMENADLGAKGANSQLLEIEALNEAMAKQRAEITRLR 944
Cdd:pfam02463 714 KLKLEaeellADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLK 787
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
286-806 |
1.71e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.94 E-value: 1.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 286 QLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLKQLSGRLQHLN----RLRQEAL 361
Cdd:TIGR04523 90 KLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNnkynDLKKQKE 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 362 DLEIQMEKQRKEIAEKHEEINTVQLATDSLDPKDPKHSHMKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIK 441
Cdd:TIGR04523 170 ELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEIS 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 442 DLEQQLTDgQIAANEALKKDLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTevQQEKEELELIAMDAENM 521
Cdd:TIGR04523 250 NTQTQLNQ-LKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWN--KELKSELKNQEKKLEEI 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 522 RKELAELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAETSQLKQELE-KLLRRTQLEQSV--LQTELEKEREs 598
Cdd:TIGR04523 327 QNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQsYKQEIKNLESQIndLESKIQNQEK- 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 599 lrDALGKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQNHlNHVVDGLIhpEEVAARVDELRKRLKLGAGEMR-I 677
Cdd:TIGR04523 406 --LNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQ-DSVKELII--KNLDNTRESLETQLKVLSRSINkI 480
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 678 HSPSDVLGKSLADLQKQFSEILARSQWEKEEAQVRERKLhEEMALQQEKLANG----QEEFRQACERALEARIKFDKRQH 753
Cdd:TIGR04523 481 KQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKI-SSLKEKIEKLESEkkekESKISDLEDELNKDDFELKKENL 559
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 1720399285 754 NARIQQLENEIHYLQENLKSMEKIQGLTDLQLQEADEEKERILAQLQELEKKK 806
Cdd:TIGR04523 560 EKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKI 612
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
525-776 |
1.72e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 1.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 525 LAELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAETSQLKQeLEKLLRRTQLEQSVLQTELEKERESLRDAlg 604
Cdd:COG4942 12 ALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAA-LERRIAALARRIRALEQELAALEAELAEL-- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 605 kaqsseekQQENNELRTQLKQLQDDnslLKKQLKE-FQNHLNHVVDGLIHPEEVAarvdELRKRLKLgageMRIHSPSDv 683
Cdd:COG4942 89 --------EKEIAELRAELEAQKEE---LAELLRAlYRLGRQPPLALLLSPEDFL----DAVRRLQY----LKYLAPAR- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 684 lgKSLADLQKQFSEILARSQWEKEEAQVRERKLHEEMALQQEKLANGQEEfrqacERALEARIKFDKRQHNARIQQLENE 763
Cdd:COG4942 149 --REQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAE-----RQKLLARLEKELAELAAELAELQQE 221
|
250
....*....|...
gi 1720399285 764 IHYLQENLKSMEK 776
Cdd:COG4942 222 AEELEALIARLEA 234
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
286-627 |
1.96e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 46.87 E-value: 1.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 286 QLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQL--------EEAIQQKKISEAEKDLLlkQLSGRLQHLNRLR 357
Cdd:PRK04863 294 ELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAAsdhlnlvqTALRQQEKIERYQADLE--ELEERLEEQNEVV 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 358 QEA----LDLEIQMEKQRKEIAEKHEEINTVQLATDSLDPKDPKHSHMKAQKRGKEQQLDIMNRQYTQLESRLDEILCRI 433
Cdd:PRK04863 372 EEAdeqqEENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQQAVQALERAKQLCGLPDLTADNAEDWLEEFQAKE 451
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 434 AKETEEIKDLEQQLTDGQiAANEALKKDLEGV--ISG----------LQEYLGTIKGQATQAQNEcRKLQDEKETLLQRL 501
Cdd:PRK04863 452 QEATEELLSLEQKLSVAQ-AAHSQFEQAYQLVrkIAGevsrseawdvARELLRRLREQRHLAEQL-QQLRMRLSELEQRL 529
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 502 TEVQQEKEELELIAMDAENMRKELAELESALQEQHEVNASLQQAQGDLSAYETELETQLKlkdaetsQLKQELEKLLRRT 581
Cdd:PRK04863 530 RQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLE-------QLQARIQRLAARA 602
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1720399285 582 QlEQSVLQTELEKERESLRDALGKAQSSE-----------EKQQENNELRTQLKQLQ 627
Cdd:PRK04863 603 P-AWLAAQDALARLREQSGEEFEDSQDVTeymqqllererELTVERDELAARKQALD 658
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1524-1859 |
2.35e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 46.04 E-value: 2.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1524 QQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRE 1603
Cdd:pfam07888 54 NRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARIRE 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1604 LERQRQLLERD----RRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLEL 1679
Cdd:pfam07888 134 LEEDIKTLTQRvlerETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQD 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1680 SVRKLRQELEQLSQDKL---ALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLiHTTKCQNELLNEQ----- 1751
Cdd:pfam07888 214 TITTLTQKLTTAHRKEAeneALLEELRSLQERLNASERKVEGLGEELSSMAAQRDRTQAEL-HQARLQAAQLTLQladas 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1752 TQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREE-----QKFEAGKVTLEQQ-- 1824
Cdd:pfam07888 293 LALREGRARWAQERETLQQSAEADKDRIEKLSAELQRLEERLQEERMEREKLEVELGREKdcnrvQLSESRRELQELKas 372
|
330 340 350
....*....|....*....|....*....|....*
gi 1720399285 1825 QRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEE 1859
Cdd:pfam07888 373 LRVAQKEKEQLQAEKQELLEYIRQLEQRLETVADA 407
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
515-747 |
2.43e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 2.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 515 AMDAENMRKELAELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAETSQLKQELEKL---LRRTQLEQSVLQTE 591
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALeaeLAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 592 LEKERESLRDALGKAQSSEE--------KQQENNELRTQLKQLQDDNSLLKKQLKEFQNHLNHVvdglihpEEVAARVDE 663
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRqpplalllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAEL-------AALRAELEA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 664 LRKRLKLGAGEMRIHSpsdvlgKSLADLQKQFSEILARSQWEKEEAQVRERKLHEEMALQQEKLANGQEEFRQACERALE 743
Cdd:COG4942 172 ERAELEALLAELEEER------AALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
....
gi 1720399285 744 ARIK 747
Cdd:COG4942 246 AGFA 249
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1460-1694 |
2.49e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 2.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1460 LLLLQDSLAQA--KADLQEALTLGETEVAEKCSHIREVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEKNLQVV 1537
Cdd:COG4942 9 LLLALAAAAQAdaAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1538 LQQLSRHKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQLLERDRRE 1617
Cdd:COG4942 89 EKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAE 168
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720399285 1618 TERVRAESQALqscveclskeKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLELSVRKLRQELEQLSQD 1694
Cdd:COG4942 169 LEAERAELEAL----------LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
304-637 |
2.94e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.10 E-value: 2.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 304 LHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLKQLSGRlQHLNRLR------------QEALD-----LEIQ 366
Cdd:COG3096 288 LELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAAS-DHLNLVQtalrqqekieryQEDLEelterLEEQ 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 367 MEkQRKEIAEKHEEIN-TVQLATDSLDpkdpkhsHMKAQKRGKEQQLDIMNR---QYTQLESRLDEI--LCRI------- 433
Cdd:COG3096 367 EE-VVEEAAEQLAEAEaRLEAAEEEVD-------SLKSQLADYQQALDVQQTraiQYQQAVQALEKAraLCGLpdltpen 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 434 ---------AKE---TEEIKDLEQQLTDGQIAANEaLKKDLEGVISGLQEylgTIKGQATQAQNECRKLQDEKETLLQRL 501
Cdd:COG3096 439 aedylaafrAKEqqaTEEVLELEQKLSVADAARRQ-FEKAYELVCKIAGE---VERSQAWQTARELLRRYRSQQALAQRL 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 502 TEVQQEKEELELIAMDAENMRKELAELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAETSQLKQELEKLL-RR 580
Cdd:COG3096 515 QQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRaRI 594
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720399285 581 TQLEQS-----VLQTELEKERESLRDALGKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQL 637
Cdd:COG3096 595 KELAARapawlAAQDALERLREQSGEALADSQEVTAAMQQLLEREREATVERDELAARKQAL 656
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1805-1936 |
3.08e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 46.00 E-value: 3.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1805 KEREREEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLgtlQEEERRIEGLERMLSQAKQqlseREQQL 1884
Cdd:COG2433 388 KELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAEL---EEKDERIERLERELSEARS----EERRE 460
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1720399285 1885 MAKSGELLALQKEADDMRADFSLLRNqfltERKKAEKQVAGLKEALKIQRSQ 1936
Cdd:COG2433 461 IRKDREISRLDREIERLERELEEERE----RIEELKRKLERLKELWKLEHSG 508
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
421-646 |
3.22e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 46.06 E-value: 3.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 421 QLESRLDEILCRIAKETEE---IKDLEQQLTdgQIAANEALKKDLEgvisglqeylgTIKGQATQAQNECRKLQDEketl 497
Cdd:PRK11281 40 DVQAQLDALNKQKLLEAEDklvQQDLEQTLA--LLDKIDRQKEETE-----------QLKQQLAQAPAKLRQAQAE---- 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 498 LQRLTEVQQEKEELELIAMdaenmrkELAELESALQEqheVNASLQQAQGDLSAYETEL---ETQLKLKDAETS---QLK 571
Cdd:PRK11281 103 LEALKDDNDEETRETLSTL-------SLRQLESRLAQ---TLDQLQNAQNDLAEYNSQLvslQTQPERAQAALYansQRL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 572 QELEKLLRRTQLEQSVLqtelekeRESLRDALGKAQSSEEKQqenNELRTQL----KQLQDdnsLLKKQ---LKEFQNHL 644
Cdd:PRK11281 173 QQIRNLLKGGKVGGKAL-------RPSQRVLLQAEQALLNAQ---NDLQRKSlegnTQLQD---LLQKQrdyLTARIQRL 239
|
..
gi 1720399285 645 NH 646
Cdd:PRK11281 240 EH 241
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1683-1989 |
3.47e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 46.10 E-value: 3.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1683 KLRQELeQLSQDKLALHSEVA-EVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTK---CQNEL--LNEQTQLQE 1756
Cdd:PRK04863 290 ELRREL-YTSRRQLAAEQYRLvEMARELAELNEAESDLEQDYQAASDHLNLVQTALRQQEKierYQADLeeLEERLEEQN 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1757 DISKWMA-RLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMM---FQKLQKEREREEQKFEAGKVTLE------QQQR 1826
Cdd:PRK04863 369 EVVEEADeQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRaiqYQQAVQALERAKQLCGLPDLTADnaedwlEEFQ 448
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1827 QLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEG-LERmlSQAKQQLSEREQQLMaksgELLALQKEADDMRADF 1905
Cdd:PRK04863 449 AKEQEATEELLSLEQKLSVAQAAHSQFEQAYQLVRKIAGeVSR--SEAWDVARELLRRLR----EQRHLAEQLQQLRMRL 522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1906 SLLRnQFLTERKKAEKQvagLKEALKIQRSQLEKN-LLEQKQENscMQKEMATIELVAQDNHERARRLMKELSQMQQEYL 1984
Cdd:PRK04863 523 SELE-QRLRQQQRAERL---LAEFCKRLGKNLDDEdELEQLQEE--LEARLESLSESVSEARERRMALRQQLEQLQARIQ 596
|
....*
gi 1720399285 1985 ELKKQ 1989
Cdd:PRK04863 597 RLAAR 601
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1387-1848 |
3.59e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 46.10 E-value: 3.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1387 NEKKEKLTEELqSLQRDIKAAQHSedhhlqvLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELgHRREELLLLQDS 1466
Cdd:PRK04863 279 NERRVHLEEAL-ELRRELYTSRRQ-------LAAEQYRLVEMARELAELNEAESDLEQDYQAASDHL-NLVQTALRQQEK 349
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1467 LAQAKADLQEAltlgETEVAEKCSHIREVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEK---NLQVVLQQLSR 1543
Cdd:PRK04863 350 IERYQADLEEL----EERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTraiQYQQAVQALER 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1544 HKTelknvadILQLETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQqrreLERQRQLLERDRRETERVRA 1623
Cdd:PRK04863 426 AKQ-------LCGLPDLTADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQ----FEQAYQLVRKIAGEVSRSEA 494
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1624 ESQAlqscveclsKEKedlqgqCESWEKKSSHAQRVLAATEESNKMEQSNlgKLELSVRKLRQELEQlsqdKLALHSEVA 1703
Cdd:PRK04863 495 WDVA---------REL------LRRLREQRHLAEQLQQLRMRLSELEQRL--RQQQRAERLLAEFCK----RLGKNLDDE 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1704 EVQQQLQGKQEA-INSLQEELDSTQDHldlakqdlihttkcQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQL 1782
Cdd:PRK04863 554 DELEQLQEELEArLESLSESVSEARER--------------RMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQS 619
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720399285 1783 QDEIrESKLRLDQQemMFQKLQKERE--REEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSA 1848
Cdd:PRK04863 620 GEEF-EDSQDVTEY--MQQLLEREREltVERDELAARKQALDEEIERLSQPGGSEDPRLNALAERFGG 684
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
287-811 |
3.74e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 45.66 E-value: 3.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 287 LEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLKQLSGRLQHLNRLRQE--ALDLE 364
Cdd:PRK01156 185 IDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEikTAESD 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 365 IQMEKQR----KEIAEKHEEINTvqlatdslDPKDPKHSHMKAQKRGKEQQLDimnrqytqlesrLDEILCRIAKETEEI 440
Cdd:PRK01156 265 LSMELEKnnyyKELEERHMKIIN--------DPVYKNRNYINDYFKYKNDIEN------------KKQILSNIDAEINKY 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 441 KDLEQQLTDGQIAANEALKK-----DLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQqekEELELIA 515
Cdd:PRK01156 325 HAIIKKLSVLQKDYNDYIKKksrydDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFIS---EILKIQE 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 516 MDAENMRKELAELESALQEQHEVNASLQQAQGDLSAYETELETQLK--------------LKDAETSQLKQELEKLLRRT 581
Cdd:PRK01156 402 IDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEmlngqsvcpvcgttLGEEKSNHIINHYNEKKSRL 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 582 QLEQSVLQTELEKERESLRDAlgKAQSSEEKQQENNELRTQLKQLQDdnslLKKQLKEFQNHLNHVVDGLIHPEEVAARV 661
Cdd:PRK01156 482 EEKIREIEIEVKDIDEKIVDL--KKRKEYLESEEINKSINEYNKIES----ARADLEDIKIKINELKDKHDKYEEIKNRY 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 662 delrKRLKLGAGEMR------------------IHSPSDVLGKSLADLQKQFSEILAR---------SQWEKEEAQVR-- 712
Cdd:PRK01156 556 ----KSLKLEDLDSKrtswlnalavislidietNRSRSNEIKKQLNDLESRLQEIEIGfpddksyidKSIREIENEANnl 631
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 713 --ERKLHEEMALQQEKLANGQEEFRQacERALEARIKFDKRQHNARIQQLENEIHY----LQENLKSMEKIQGLTDLQLQ 786
Cdd:PRK01156 632 nnKYNEIQENKILIEKLRGKIDNYKK--QIAEIDSIIPDLKEITSRINDIEDNLKKsrkaLDDAKANRARLESTIEILRT 709
|
570 580
....*....|....*....|....*
gi 1720399285 787 EADEEKERILAQLQELEKKKKREDA 811
Cdd:PRK01156 710 RINELSDRINDINETLESMKKIKKA 734
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
1665-1971 |
4.02e-04 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 44.90 E-value: 4.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1665 ESNKMEQSNLGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDlakqdlihttkcq 1744
Cdd:COG1340 1 SKTDELSSSLEELEEKIEELREEIEELKEKRDELNEELKELAEKRDELNAQVKELREEAQELREKRD------------- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1745 nELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKlrldqqemmfqKLQKEREREEQKFEAGKVTLEQq 1824
Cdd:COG1340 68 -ELNEKVKELKEERDELNEKLNELREELDELRKELAELNKAGGSID-----------KLRKEIERLEWRQQTEVLSPEE- 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1825 qrqlEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDMRAD 1904
Cdd:COG1340 135 ----EKELVEKIKELEKELEKAKKALEKNEKLKELRAELKELRKEAEEIHKKIKELAEEAQELHEEMIELYKEADELRKE 210
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720399285 1905 FSLLRNQFLTERKKAEKQVAGLKEAL-KIQRSQLEKNLLEQKQENSCMQKEMATIELVAQDNHERARR 1971
Cdd:COG1340 211 ADELHKEIVEAQEKADELHEEIIELQkELRELRKELKKLRKKQRALKREKEKEELEEKAEEIFEKLKK 278
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
292-910 |
4.12e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 45.71 E-value: 4.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 292 KKISAAQTRLSELHHEIETAEQKVLRATQefkQLEEAIQQKKISEAEKDLLLKQLSGRLQHLNRLRQEALdlEIQMEKQR 371
Cdd:COG3096 347 EKIERYQEDLEELTERLEEQEEVVEEAAE---QLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRAI--QYQQAVQA 421
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 372 KEIAEKheeintvQLATDSLDPKDPKHSHmkAQKRGKEQQLDimnRQYTQLESRLD-------------EILCRIAKETE 438
Cdd:COG3096 422 LEKARA-------LCGLPDLTPENAEDYL--AAFRAKEQQAT---EEVLELEQKLSvadaarrqfekayELVCKIAGEVE 489
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 439 EikdleqqlTDGQIAANEALK-----KDLEGVISGLQEYLGTIKgQATQAQNECRKLQDEketLLQRLTEVQQEKEELEL 513
Cdd:COG3096 490 R--------SQAWQTARELLRryrsqQALAQRLQQLRAQLAELE-QRLRQQQNAERLLEE---FCQRIGQQLDAAEELEE 557
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 514 IAMDAENMRKEL-AELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAETsQLKQELEKLLRRTQLEQSVLQTEL 592
Cdd:COG3096 558 LLAELEAQLEELeEQAAEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALE-RLREQSGEALADSQEVTAAMQQLL 636
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 593 EKERES--LRDALGKAQSSEEKQ-----QENNELRTQLKQLQD------------------------------------D 629
Cdd:COG3096 637 EREREAtvERDELAARKQALESQierlsQPGGAEDPRLLALAErlggvllseiyddvtledapyfsalygparhaivvpD 716
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 630 NSLLKKQLKEFQNHLNHVV----------DGLIHPEEVAARV------------------------------------DE 663
Cdd:COG3096 717 LSAVKEQLAGLEDCPEDLYliegdpdsfdDSVFDAEELEDAVvvklsdrqwrysrfpevplfgraarekrleelraerDE 796
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 664 LRKRL-KLGAGEMRI----HSPSDVLGKSLA------------DLQKQFSEILAR-SQWEKEEAQVRE------------ 713
Cdd:COG3096 797 LAEQYaKASFDVQKLqrlhQAFSQFVGGHLAvafapdpeaelaALRQRRSELERElAQHRAQEQQLRQqldqlkeqlqll 876
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 714 -RKLHEEMALQQEKLANGQEEFRQACERALEARIKFdkRQHNARIQQLENEIHYLQENLKSMEKIQgltdLQLQEADEEK 792
Cdd:COG3096 877 nKLLPQANLLADETLADRLEELREELDAAQEAQAFI--QQHGKALAQLEPLVAVLQSDPEQFEQLQ----ADYLQAKEQQ 950
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 793 ERILAQLQELEKKKKREDARSQEQFLGLDEELKSLKKAVAASDKLAAAELTIAKDQLKSLHGTVVRINQERA-------- 864
Cdd:COG3096 951 RRLKQQIFALSEVVQRRPHFSYEDAVGLLGENSDLNEKLRARLEQAEEARREAREQLRQAQAQYSQYNQVLAslkssrda 1030
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720399285 865 --EELQEAER--------FSREAMQAA----------------------KDLSRAEAEIELLQHLLREREGQFRDEME 910
Cdd:COG3096 1031 kqQTLQELEQeleelgvqADAEAEERArirrdelheelsqnrsrrsqleKQLTRCEAEMDSLQKRLRKAERDYKQERE 1108
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
5-52 |
4.47e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.20 E-value: 4.47e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1720399285 5 NLGKIEG--LENMCNLQKLNLAGNEIEHI-PVWFAKkLKSLRVLNLKGNKI 52
Cdd:pfam13855 12 RLTSLDDgaFKGLSNLKVLDLSNNLLTTLsPGAFSG-LPSLRYLDLSGNRL 61
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1677-1883 |
4.80e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.39 E-value: 4.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1677 LELSVRKLRQELEQLSQdklALHSEVAEVQQQLQGKQEAINSLQEELDStqdhLDLAKQDLIHTTKcQNELLNEQTQLQE 1756
Cdd:COG3206 162 LEQNLELRREEARKALE---FLEEQLPELRKELEEAEAALEEFRQKNGL----VDLSEEAKLLLQQ-LSELESQLAEARA 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1757 DISKWMARLESCQKETETKEQQ---------VQQLQDEIRESKLRLDQQEMMF--------------QKLQKEREREEQK 1813
Cdd:COG3206 234 ELAEAEARLAALRAQLGSGPDAlpellqspvIQQLRAQLAELEAELAELSARYtpnhpdvialraqiAALRAQLQQEAQR 313
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1814 FEAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSEREQQ 1883
Cdd:COG3206 314 ILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEARLAEAL 383
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
1610-2001 |
4.88e-04 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 45.20 E-value: 4.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1610 LLERDRRETERVRAESQALQSCVECLSKEKEdLQGQCESWEKKSSHAQRVLAATEESNKMEQSNLgklELSVRKLRQELE 1689
Cdd:pfam10174 200 LLDQKEKENIHLREELHRRNQLQPDPAKTKA-LQTVIEMKDTKISSLERNIRDLEDEVQMLKTNG---LLHTEDREEEIK 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1690 QL----SQDKLaLHSEVAEVQQQLQGKQEAINSLQEELDS-------TQDHLDLAKQDLihTTKCQnellnEQTQLQEDI 1758
Cdd:pfam10174 276 QMevykSHSKF-MKNKIDQLKQELSKKESELLALQTKLETltnqnsdCKQHIEVLKESL--TAKEQ-----RAAILQTEV 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1759 SKWMARLESCQKETETKEQQVQQLQD-------EIRESKLRLDQQEMMFQKLQKEREreeqkfeagkvTLEQQQRQLEKE 1831
Cdd:pfam10174 348 DALRLRLEEKESFLNKKTKQLQDLTEekstlagEIRDLKDMLDVKERKINVLQKKIE-----------NLQEQLRDKDKQ 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1832 LTDQKSRLKQLLTDVSAAEGRLGTLQE----EERRIEGL---------ERM--LSQAKQQLSEREQQLMAKSGELLALQK 1896
Cdd:pfam10174 417 LAGLKERVKSLQTDSSNTDTALTTLEEalseKERIIERLkeqreredrERLeeLESLKKENKDLKEKVSALQPELTEKES 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1897 EADDMRADFSLLRNQFL---TERKKAEKQVAGLKEALKIQRSQLEK--NLLEQKQENSCMQKEMATIELVAQDNHERAR- 1970
Cdd:pfam10174 497 SLIDLKEHASSLASSGLkkdSKLKSLEIAVEQKKEECSKLENQLKKahNAEEAVRTNPEINDRIRLLEQEVARYKEESGk 576
|
410 420 430
....*....|....*....|....*....|....*..
gi 1720399285 1971 ------RLMKELSQMQQEYLELKKQVANQKDLERRQM 2001
Cdd:pfam10174 577 aqaeveRLLGILREVENEKNDKDKKIAELESLTLRQM 613
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1820-1999 |
5.59e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.01 E-value: 5.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1820 TLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEE------ERRIEGLERMLSQAKQQLSEREQQLMAKSGELLA 1893
Cdd:COG3206 165 NLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKnglvdlSEEAKLLLQQLSELESQLAEARAELAEAEARLAA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1894 LQKEADDMRADFSLLRN-----QFLTERKKAEKQVAGLKE----------ALKIQRSQLEKNLLEQkqenscMQKEMATI 1958
Cdd:COG3206 245 LRAQLGSGPDALPELLQspviqQLRAQLAELEAELAELSArytpnhpdviALRAQIAALRAQLQQE------AQRILASL 318
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1720399285 1959 ELVAQDNHERARRLMKELSQMQQEYLELKKQVANQKDLERR 1999
Cdd:COG3206 319 EAELEALQAREASLQAQLAQLEARLAELPELEAELRRLERE 359
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1302-1725 |
6.11e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.76 E-value: 6.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1302 TKEKTKSAVEKFTDAKRNLLQTESDAEALEKRAQETALNLVKAEQQLRLLQADAEDLEQhKIKQEEILKEINKVVAAKDA 1381
Cdd:COG4717 65 KPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEK-LLQLLPLYQELEALEAELAE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1382 DFQCLNEKKEKLtEELQSLQRDIKAA-QHSEDHHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRREEL 1460
Cdd:COG4717 144 LPERLEELEERL-EELRELEEELEELeAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEEL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1461 LLLQDSLAQAKADLQealTLGETEVAEKCSHIREVKSLLEELSFQKGELNVHISEKKTQLALIQQEmekeeknLQVVLQQ 1540
Cdd:COG4717 223 EELEEELEQLENELE---AAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGL-------LALLFLL 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1541 LSRHKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQLLERDRRETER 1620
Cdd:COG4717 293 LAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEI 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1621 VRAESQALQSCVECLSKEKEDLQgQCESWEKKSSHAQRVLAA--TEESNKMEQSNLGKLELSVRKLRQELEQLSQDKLAL 1698
Cdd:COG4717 373 AALLAEAGVEDEEELRAALEQAE-EYQELKEELEELEEQLEEllGELEELLEALDEEELEEELEELEEELEELEEELEEL 451
|
410 420
....*....|....*....|....*....
gi 1720399285 1699 HSEVAEVQQQLQ--GKQEAINSLQEELDS 1725
Cdd:COG4717 452 REELAELEAELEqlEEDGELAELLQELEE 480
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1671-1978 |
6.37e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.51 E-value: 6.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1671 QSNLGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNE 1750
Cdd:COG4372 51 REELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQ 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1751 QTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAGKVTLEQQQRQLEK 1830
Cdd:COG4372 131 RKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIE 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1831 ELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDMRADFSLLRN 1910
Cdd:COG4372 211 SLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEE 290
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720399285 1911 QFLTERKKAEKQVAGLKEALKIQRSQLEKNLLEQKQENSCMQKEMATIELVAQDNHERARRLMKELSQ 1978
Cdd:COG4372 291 AALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVGLLDNDVLEL 358
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
321-597 |
7.54e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 44.53 E-value: 7.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 321 EFKQLEEAIQQKKISEAEKdlLLKQLSgrlQHLNRLRQEaldleiqMEKQRKEIAEKheeintvqlatdsldpkdpkhsh 400
Cdd:PRK05771 32 HIEDLKEELSNERLRKLRS--LLTKLS---EALDKLRSY-------LPKLNPLREEK----------------------- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 401 MKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKDLEQQLtdgqiaanEALK--KDLEGVISGLQ--EYLGTI 476
Cdd:PRK05771 77 KKVSVKSLEELIKDVEEELEKIEKEIKELEEEISELENEIKELEQEI--------ERLEpwGNFDLDLSLLLgfKYVSVF 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 477 KGQATQAQNECRKLQDEKETLLqrltEVQQEKEELELIAM----DAENMRKELAELE-SALQEQHEvnaslqqaqGDLSA 551
Cdd:PRK05771 149 VGTVPEDKLEELKLESDVENVE----YISTDKGYVYVVVVvlkeLSDEVEEELKKLGfERLELEEE---------GTPSE 215
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1720399285 552 YETELETQLKLKDAETSQLKQELEKLLRRTQLEQSVLQTELEKERE 597
Cdd:PRK05771 216 LIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELE 261
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
286-538 |
8.02e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 44.67 E-value: 8.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 286 QLEDTEKKISAAQTRLSELHHEIETAEQKVLRA-----TQEFKQLEEAIQQKKISEAEKDLLLKQLSGRLQHLNRLRQEA 360
Cdd:TIGR02169 759 ELKELEARIEELEEDLHKLEEALNDLEARLSHSripeiQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQEL 838
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 361 LDLEIQMEKQRKEIAEKHEEINTvqlatdsldpkdpkhshmkaQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEI 440
Cdd:TIGR02169 839 QEQRIDLKEQIKSIEKEIENLNG--------------------KKEELEEELEELEAALRDLESRLGDLKKERDELEAQL 898
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 441 KDLEQQLTDGQIAANEALK--KDLEGVISGLQEYLGTIKGQATQAQNECRKLQDEkETLLQRLTEVQQEKEELELIAMDA 518
Cdd:TIGR02169 899 RELERKIEELEAQIEKKRKrlSELKAKLEALEEELSEIEDPKGEDEEIPEEELSL-EDVQAELQRVEEEIRALEPVNMLA 977
|
250 260
....*....|....*....|
gi 1720399285 519 ENMRKELAELESALQEQHEV 538
Cdd:TIGR02169 978 IQEYEEVLKRLDELKEKRAK 997
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1446-1886 |
8.66e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 8.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1446 LAVLDSELGHRREELLLLQDSLAQAKADLQEALTLGETEVAEKCSHIREVKSLLEELSFQKGELNVHISEKKTQLALIQQ 1525
Cdd:COG4717 44 RAMLLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEK 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1526 EMEKEEknLQVVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQAT-QQQRREL 1604
Cdd:COG4717 124 LLQLLP--LYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEElQDLAEEL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1605 ERQRQLLERDRRETERVRAESQALQSCVECLSKEKEDLQGQCESWEKK------------SSHAQRVLAATEESNKMEQS 1672
Cdd:COG4717 202 EELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARlllliaaallalLGLGGSLLSLILTIAGVLFL 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1673 NLGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNEL--LNE 1750
Cdd:COG4717 282 VLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAeeLEE 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1751 QTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEagKVTLEQQQRQLEK 1830
Cdd:COG4717 362 ELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALD--EEELEEELEELEE 439
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1720399285 1831 ELTDQKSRLKQLLTDVSAAEGRLGTLqEEERRIEGLERMLSQAKQQLSEREQQLMA 1886
Cdd:COG4717 440 ELEELEEELEELREELAELEAELEQL-EEDGELAELLQELEELKAELRELAEEWAA 494
|
|
| PRK11637 |
PRK11637 |
AmiB activator; Provisional |
1509-1703 |
9.09e-04 |
|
AmiB activator; Provisional
Pssm-ID: 236942 [Multi-domain] Cd Length: 428 Bit Score: 43.91 E-value: 9.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1509 LNVHISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNvadilQLETSELQGLKLQHDQKVVELEKAQVDVLEEKL 1588
Cdd:PRK11637 38 FSAHASDNRDQLKSIQQDIAAKEKSVRQQQQQRASLLAQLKK-----QEEAISQASRKLRETQNTLNQLNKQIDELNASI 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1589 ELENLQQAtqQQRRELERQR------------QLL---ERDRREtERVRAE----SQALQSCVECLSKEKEDLQGQCESW 1649
Cdd:PRK11637 113 AKLEQQQA--AQERLLAAQLdaafrqgehtglQLIlsgEESQRG-ERILAYfgylNQARQETIAELKQTREELAAQKAEL 189
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720399285 1650 EKKSSHAQRVLAAT-EESNKMEQS------NLGKLELSVRKLRQELEQLSQDKLALHSEVA 1703
Cdd:PRK11637 190 EEKQSQQKTLLYEQqAQQQKLEQArnerkkTLTGLESSLQKDQQQLSELRANESRLRDSIA 250
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
523-974 |
1.10e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.99 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 523 KELAELESALQEQHEVNASLQQAQGDLSAYETELEtQLKLKDAETSQLKQELEKLLRRTQLEQsvlqtELEKERESLRDA 602
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEELE-ELEAELEELREELEKLEKLLQLLPLYQ-----ELEALEAELAEL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 603 LGKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQNHLNHVVDGLIhpEEVAARVDELRKRLKLgagemrihspsd 682
Cdd:COG4717 145 PERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEEL--QDLAEELEELQQRLAE------------ 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 683 vLGKSLADLQKQFSEIlarsqwEKEEAQVRERKLHEEMALQQEKLANGQEEFRQACERALEARIKFDKRQHNARIQQLEN 762
Cdd:COG4717 211 -LEEELEEAQEELEEL------EEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVL 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 763 EIHYLQENLKSMEKIQGLTDLQLQEADEEKERILAQ-LQELEKKKKREDARSQEQFLGLDEELKSLKKAVAASDKLAA-A 840
Cdd:COG4717 284 GLLALLFLLLAREKASLGKEAEELQALPALEELEEEeLEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEeL 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 841 ELTIAKDQLKSLhgtVVRINQERAEELQEAERFSREAMQAAKDLSRAEAEIELLQHLLREREGQFRDEMENADLGAKGAN 920
Cdd:COG4717 364 QLEELEQEIAAL---LAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEE 440
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1720399285 921 SQLL--EIEALNEAMAKQRAEITRLRDVLNLTGAGTKggIENVLEEIAELRHAVSA 974
Cdd:COG4717 441 LEELeeELEELREELAELEAELEQLEEDGELAELLQE--LEELKAELRELAEEWAA 494
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
17-60 |
1.19e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 38.38 E-value: 1.19e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 1720399285 17 NLQKLNLAGNEIEHIPvwFAKKLKSLRVLNLKGN-KISSLQDVSK 60
Cdd:pfam12799 2 NLEVLDLSNNQITDIP--PLAKLPNLETLDLSGNnKITDLSDLAN 44
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1609-1976 |
1.20e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 43.73 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1609 QLLERDRRETERVRAE-SQALQSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLELSVRKLRQE 1687
Cdd:pfam07888 30 ELLQNRLEECLQERAElLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSAS 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1688 LEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDISKWMARLES 1767
Cdd:pfam07888 110 SEELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRS 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1768 CQKE-------TETKEQQVQQLQDEIRESKLRLD-------QQEMMFQKLQKERER---EEQKFEAGKVTLEQQQRQLEK 1830
Cdd:pfam07888 190 LSKEfqelrnsLAQRDTQVLQLQDTITTLTQKLTtahrkeaENEALLEELRSLQERlnaSERKVEGLGEELSSMAAQRDR 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1831 ELTD-QKSRLKQLLTDVSAAEGRLgTLQEEERRIEGLERMLSQAKQQLSEREQQLmakSGELLALQKEADDMRadfsllr 1909
Cdd:pfam07888 270 TQAElHQARLQAAQLTLQLADASL-ALREGRARWAQERETLQQSAEADKDRIEKL---SAELQRLEERLQEER------- 338
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720399285 1910 nqflTERKKAEKQVAGLKEALKIQRSQLEKNLLEQKQENSCMQKEMATIELVAQDNHERARRLMKEL 1976
Cdd:pfam07888 339 ----MEREKLEVELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQELLEYIRQLEQRL 401
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1408-1885 |
1.26e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 43.96 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1408 QHSEDHHLQVLRESETL-LQAKRAELETLKSQVTSQQQ---ELAVLDSELGH--RREELLLLQDSLAQAKADLQEALTLG 1481
Cdd:pfam05557 5 IESKARLSQLQNEKKQMeLEHKRARIELEKKASALKRQldrESDRNQELQKRirLLEKREAEAEEALREQAELNRLKKKY 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1482 ETEVAEKcshIREVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSE 1561
Cdd:pfam05557 85 LEALNKK---LNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1562 LQGLKlQHDQKVVELEKaQVDVLEEKLELENLQQATQQQRRELERqrqLLERDRRETERVRaesqALQSCVECLSKEKED 1641
Cdd:pfam05557 162 QSSLA-EAEQRIKELEF-EIQSQEQDSEIVKNSKSELARIPELEK---ELERLREHNKHLN----ENIENKLLLKEEVED 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1642 LQGQCESWEK----------KSSHAQRVLAATEESNKMEQSNLGKLELsvrkLRQELEQLSQDKLALHSEVAEVQQQLQG 1711
Cdd:pfam05557 233 LKRKLEREEKyreeaatlelEKEKLEQELQSWVKLAQDTGLNLRSPED----LSRRIEQLQQREIVLKEENSSLTSSARQ 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1712 KQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQdeireskl 1791
Cdd:pfam05557 309 LEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKERDGYRAILESYDKELTMSNYSPQLLE-------- 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1792 RLDQQEMMFQKLQKEREREEQKFEAGKVTL---EQQQRQLEKELtdQKSRLKQLLTDVSAAEGRLGTLQeeeRRIEGLER 1868
Cdd:pfam05557 381 RIEEAEDMTQKMQAHNEEMEAQLSVAEEELggyKQQAQTLEREL--QALRQQESLADPSYSKEEVDSLR---RKLETLEL 455
|
490
....*....|....*..
gi 1720399285 1869 MLSQAKQQLSEREQQLM 1885
Cdd:pfam05557 456 ERQRLREQKNELEMELE 472
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
285-634 |
1.36e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.99 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 285 LQLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLKQLS-GRLQHLNRLRQEALDL 363
Cdd:COG4717 125 LQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSlATEEELQDLAEELEEL 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 364 EIQMEKQRKEIAEKHEEINTVQLATDSLDPKDPKHSHMKAQKRGKEQQLDI----------------------------- 414
Cdd:COG4717 205 QQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAaallallglggsllsliltiagvlflvlg 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 415 --------MNRQYTQLESRLDEILCRIAKETEEIKDLEQQLtdgqiaanEALKKDLEGVISGLQEYLGTIKgqatqaqnE 486
Cdd:COG4717 285 llallfllLAREKASLGKEAEELQALPALEELEEEELEELL--------AALGLPPDLSPEELLELLDRIE--------E 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 487 CRKLQDEKETLLQRLTEVQQEKEELELIAMDAENMRKELAELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAE 566
Cdd:COG4717 349 LQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEE 428
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720399285 567 TSQLK-QELEKLLRRTQLEQSVLQTELeKERESLRDALGKAQSSEEKQQENNELRTQLKQLQDDNSLLK 634
Cdd:COG4717 429 ELEEElEELEEELEELEEELEELREEL-AELEAELEQLEEDGELAELLQELEELKAELRELAEEWAALK 496
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1622-1948 |
1.44e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 43.74 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1622 RAESQALQScVECLSKEKEDLQGQCESWEKKSSHA-QRVLAATEesnkmEQSNLGKLELSVRKLRQELEQLSQ-DKLALH 1699
Cdd:PLN02939 149 QARLQALED-LEKILTEKEALQGKINILEMRLSETdARIKLAAQ-----EKIHVEILEEQLEKLRNELLIRGAtEGLCVH 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1700 SEVAEvqqqlqgkqeaINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNeqtqlqedISKWMARLESCQKETETKEQQV 1779
Cdd:PLN02939 223 SLSKE-----------LDVLKEENMLLKDDIQFLKAELIEVAETEERVFK--------LEKERSLLDASLRELESKFIVA 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1780 QqlQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAGKVTLEQQQrQLEKELTDQKSRLKQLLTDVSAAEgRLGTLQE- 1858
Cdd:PLN02939 284 Q--EDVSKLSPLQYDCWWEKVENLQDLLDRATNQVEKAALVLDQNQ-DLRDKVDKLEASLKEANVSKFSSY-KVELLQQk 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1859 ----EERRIEGLERMLSQAK--QQLSEREQQLMAK---SGELLALQKEADDMRADF----SLLRNQFLTERKKAEKQVAG 1925
Cdd:PLN02939 360 lkllEERLQASDHEIHSYIQlyQESIKEFQDTLSKlkeESKKRSLEHPADDMPSEFwsriLLLIDGWLLEKKISNNDAKL 439
|
330 340
....*....|....*....|...
gi 1720399285 1926 LKEALKIQRSQLEKNLLEQKQEN 1948
Cdd:PLN02939 440 LREMVWKRDGRIREAYLSCKGKN 462
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1174-1577 |
1.57e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 43.95 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1174 EVSRLEDIMQHLKSK-QREERRQKASTQ---HSEEEVDGLHRDIDDLLQEKKELELEVEELHRTIERHQQRKDFIDGHVE 1249
Cdd:pfam15921 427 EVQRLEALLKAMKSEcQGQMERQMAAIQgknESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQ 506
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1250 NL-----MTELEIEKSLKHHEDIVDEIECLEKTLLKRRSELREADRL---LAEAENELACTKEKTKSAVEKFTDAKRNLL 1321
Cdd:pfam15921 507 EKeraieATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALklqMAEKDKVIEILRQQIENMTQLVGQHGRTAG 586
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1322 QTESDAEALEKRAQETALNLV-------KAEQQLRLLQADAEDLEQHKIK----QEEILKEINKVVAAKDadfQCLNEKK 1390
Cdd:pfam15921 587 AMQVEKAQLEKEINDRRLELQefkilkdKKDAKIRELEARVSDLELEKVKlvnaGSERLRAVKDIKQERD---QLLNEVK 663
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1391 ------EKLTEELQSLQRDIKAAQHsedhhlqvlrESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRREELLLLQ 1464
Cdd:pfam15921 664 tsrnelNSLSEDYEVLKRNFRNKSE----------EMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQ 733
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1465 ----------DSLAQAKADLQEALTLGETEV----AEKCSHIREVKSLLEELSFQKGELNVHISEKKtqlaliqqEMEKE 1530
Cdd:pfam15921 734 kqitakrgqiDALQSKIQFLEEAMTNANKEKhflkEEKNKLSQELSTVATEKNKMAGELEVLRSQER--------RLKEK 805
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1720399285 1531 EKNLQVVLQQLSRHKTELKnvaDILQLETSELQGLKLQHDQKVVELE 1577
Cdd:pfam15921 806 VANMEVALDKASLQFAECQ---DIIQRQEQESVRLKLQHTLDVKELQ 849
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
119-823 |
1.59e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 43.56 E-value: 1.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 119 IERLEKDLEKKTVETEELKNKQTKFLEEIKNQDKLNKSLKEEAMLQKQSCE---ELESDLSTKKELLKQKTVELTRACQK 195
Cdd:pfam05483 115 IEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATRHLCNLLKETCArsaEKTKKYEYEREETRQVYMDLNNNIEK 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 196 QYELEQEL----------AFYKIDAKFEPLNYYPSEYAEI--DKYPDESPYIGKSRYKRNMFATETYIVSDAQavQIRKM 263
Cdd:pfam05483 195 MILAFEELrvqaenarleMHFKLKEDHEKIQHLEEEYKKEinDKEKQVSLLLIQITEKENKMKDLTFLLEESR--DKANQ 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 264 VPEGGQLRHEHTPPRVQAPPDL--QLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDL 341
Cdd:pfam05483 273 LEEKTKLQDENLKELIEKKDHLtkELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVT 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 342 LLKQLSGRLQHLNRLRQEALdleiqmekqrkeiaEKHEEinTVQLATDSLDPKDPKHSHMKAQKRGKEQQLDIMNRQYTQ 421
Cdd:pfam05483 353 EFEATTCSLEELLRTEQQRL--------------EKNED--QLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAE 416
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 422 LESRLDEILcRIAKETEEIKDLEQQLTdGQIAANEALKKDLEGVISGLQeylgtikgqaTQAQNECRKLQDEKETLlqrl 501
Cdd:pfam05483 417 DEKLLDEKK-QFEKIAEELKGKEQELI-FLLQAREKEIHDLEIQLTAIK----------TSEEHYLKEVEDLKTEL---- 480
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 502 tevqqEKEELELIAMDAeNMRKELAELESALQEQHEVNASLQQAQGDLSAYETELETQLK----LKDAETsQLKQELEKL 577
Cdd:pfam05483 481 -----EKEKLKNIELTA-HCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKqienLEEKEM-NLRDELESV 553
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 578 LRRTQLEQSVLQTELEKERESLRDALGKAQSSEEkqqennelrtQLKQLQDDNSLLKKQLKEFQNHLNHvvdglIHPEEV 657
Cdd:pfam05483 554 REEFIQKGDEVKCKLDKSEENARSIEYEVLKKEK----------QMKILENKCNNLKKQIENKNKNIEE-----LHQENK 618
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 658 AARVDELRKRLKLGAGEMRIHSpsdvLGKSLADLQKQFSEILARSQWEKEEAQVRERKLHEEMALQQ---EKLANGQEEF 734
Cdd:pfam05483 619 ALKKKGSAENKQLNAYEIKVNK----LELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKaiaDEAVKLQKEI 694
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 735 RQACERALE---ARIKFDKRQHNARIQQLENEIHYLQENLKSMEKIQGLTDLQLQEADEEKERILAQLQELEKKKKREDA 811
Cdd:pfam05483 695 DKRCQHKIAemvALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKM 774
|
730
....*....|..
gi 1720399285 812 RSQEQFLGLDEE 823
Cdd:pfam05483 775 EAKENTAILKDK 786
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1802-2055 |
1.65e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.51 E-value: 1.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1802 KLQKEREREEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSERE 1881
Cdd:PRK03918 172 KEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1882 QQLMAKSGELLALQKEADDMRADFSLLRNQF-----LTERKKAEKQVAGLKEALKIQRSQLEKNLLEQKQENSCMQKEMA 1956
Cdd:PRK03918 252 GSKRKLEEKIRELEERIEELKKEIEELEEKVkelkeLKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIK 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1957 TIElvaqDNHERARRLMKELSQMQQEYLELKKQVANQKDLERRQMEVSDAMRTLKSEVKDEIRTSLRNLNQFLPELPADL 2036
Cdd:PRK03918 332 ELE----EKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEI 407
|
250 260
....*....|....*....|
gi 1720399285 2037 ASILERNENLR-ELESLKEN 2055
Cdd:PRK03918 408 SKITARIGELKkEIKELKKA 427
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
275-484 |
1.69e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.28 E-value: 1.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 275 TPPRVQAPPDL-----QLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQ--QKKISEAEKDL--LLKQ 345
Cdd:COG3883 8 APTPAFADPQIqakqkELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDklQAEIAEAEAEIeeRREE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 346 LSGRLQHLNRLRQEALDLEI------------QMEKQRKEIAEKHEEINTVQLATDSLdpkdpkhshmKAQKRGKEQQLD 413
Cdd:COG3883 88 LGERARALYRSGGSVSYLDVllgsesfsdfldRLSALSKIADADADLLEELKADKAEL----------EAKKAELEAKLA 157
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720399285 414 IMNRQYTQLESRLDEILCRIAKETEEIKDLEQQLTD--GQIAANEALKKDLEGVISGLQEYLGTIKGQATQAQ 484
Cdd:COG3883 158 ELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAaeAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAA 230
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1821-2021 |
1.81e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.89 E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1821 LEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQEE----ERRIEGLERMLSQAKQQLSEREQQL------MAKSG- 1889
Cdd:COG3883 21 KQKELSELQAELEAAQAELDALQAELEELNEEYNELQAElealQAEIDKLQAEIAEAEAEIEERREELgeraraLYRSGg 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1890 -----ELLALQKEADDMRADFSLLrNQFLTERKKAEKQVAGLKEALKIQRSQLEknllEQKQENSCMQKEMATIELVAQD 1964
Cdd:COG3883 101 svsylDVLLGSESFSDFLDRLSAL-SKIADADADLLEELKADKAELEAKKAELE----AKLAELEALKAELEAAKAELEA 175
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1720399285 1965 NHERARRLMKELSQMQQEYLELKKQVANQKDLERRQMEVSDAMRTLKSEVKDEIRTS 2021
Cdd:COG3883 176 QQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAA 232
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1664-2002 |
1.84e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 43.56 E-value: 1.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1664 EESNKMEQSNLGKLELSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAK-------QD 1736
Cdd:pfam05483 274 EEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKaahsfvvTE 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1737 LIHTTKCQNELLNEQTQLQE-----------DISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMmFQKLQK 1805
Cdd:pfam05483 354 FEATTCSLEELLRTEQQRLEknedqlkiitmELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQ-FEKIAE 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1806 EREREEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLgtlqeEERRIEGLErMLSQAKQQLSEREQQLM 1885
Cdd:pfam05483 433 ELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTEL-----EKEKLKNIE-LTAHCDKLLLENKELTQ 506
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1886 AKSGELLALQKEADDMradfsllrNQFLTERKKAEKQVAGLKEALKIQRSQLEKNLLEQKQENSCMQKEMATIELVAQDN 1965
Cdd:pfam05483 507 EASDMTLELKKHQEDI--------INCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSI 578
|
330 340 350
....*....|....*....|....*....|....*...
gi 1720399285 1966 HERARRLMKELSQMQQEYLELKKQVANQ-KDLERRQME 2002
Cdd:pfam05483 579 EYEVLKKEKQMKILENKCNNLKKQIENKnKNIEELHQE 616
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
705-816 |
1.87e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.23 E-value: 1.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 705 EKEEAQVRERKLHEEMALQQEKLANGQEEFrqaceraLEARIKFDK--RQHNARIQQLENEIHYLQENLKsmEKIQGLTD 782
Cdd:PRK12704 37 EEEAKRILEEAKKEAEAIKKEALLEAKEEI-------HKLRNEFEKelRERRNELQKLEKRLLQKEENLD--RKLELLEK 107
|
90 100 110
....*....|....*....|....*....|....
gi 1720399285 783 LQlQEADEEKERILAQLQELEKKKKREDARSQEQ 816
Cdd:PRK12704 108 RE-EELEKKEKELEQKQQELEKKEEELEELIEEQ 140
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1171-1439 |
2.08e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.52 E-value: 2.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1171 LENEVSRLEDIMQHLKSKQREERRQKASTQHSEEEVDGLHRDI-------DDLLQEKKELELEVEELH-RTIERHQQRKD 1242
Cdd:TIGR02169 732 EEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLhkleealNDLEARLSHSRIPEIQAElSKLEEEVSRIE 811
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1243 FIDGHVENLMTELEIEKSL--KHHEDIVDEIECLEKTLLKRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAKRNL 1320
Cdd:TIGR02169 812 ARLREIEQKLNRLTLEKEYleKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKER 891
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1321 LQTESDAEALEKRAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEINKVVAAkDADFQCLNEKKEKLTEELQSL 1400
Cdd:TIGR02169 892 DELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEE-ELSLEDVQAELQRVEEEIRAL 970
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1720399285 1401 QR-DIKAAQHSEDhhlQVLRESEtlLQAKRAELETLKSQV 1439
Cdd:TIGR02169 971 EPvNMLAIQEYEE---VLKRLDE--LKEKRAKLEEERKAI 1005
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1689-1948 |
2.10e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.97 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1689 EQLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDISKWMARLESC 1768
Cdd:COG4372 6 EKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1769 QKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAgkvtLEQQQRQLEKELTDQKSRLKQLLTDVSA 1848
Cdd:COG4372 86 NEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQ----LEAQIAELQSEIAEREEELKELEEQLES 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1849 AEGRLGTLQEEERRIEgLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDMRADFSLLRNQFLTERKKAEKQVAGLKE 1928
Cdd:COG4372 162 LQEELAALEQELQALS-EAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLD 240
|
250 260
....*....|....*....|
gi 1720399285 1929 ALKIQRSQLEKNLLEQKQEN 1948
Cdd:COG4372 241 ALELEEDKEELLEEVILKEI 260
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
514-757 |
2.25e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.08 E-value: 2.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 514 IAMDAENMRKELAELESALQEQ-HEVNASLQQAQGDLSAYETE-----LETQLKLKDAETSQLKQELEKLLRRTQleqsv 587
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQlPELRKELEEAEAALEEFRQKnglvdLSEEAKLLLQQLSELESQLAEARAELA----- 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 588 lqtELEKERESLRDALGKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQNHlnhvvdgliHPEEVAAR--VDELR 665
Cdd:COG3206 237 ---EAEARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPN---------HPDVIALRaqIAALR 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 666 KRLKLGAGEMRIHSPSDV--LGKSLADLQKQFSEILARSQwekeEAQVRERKLHEemaLQQEkLANGQEEFRQACERALE 743
Cdd:COG3206 305 AQLQQEAQRILASLEAELeaLQAREASLQAQLAQLEARLA----ELPELEAELRR---LERE-VEVARELYESLLQRLEE 376
|
250
....*....|....
gi 1720399285 744 ARIKFDKRQHNARI 757
Cdd:COG3206 377 ARLAEALTVGNVRV 390
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
278-946 |
2.30e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.13 E-value: 2.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 278 RVQAPPDLQLEDTEKKISAAQTRLSELHHEIEtaeqkvlratqefkQLEEAIQQKKIseaEKDLLLKQLSGRLQHLNRLR 357
Cdd:TIGR02169 308 RSIAEKERELEDAEERLAKLEAEIDKLLAEIE--------------ELEREIEEERK---RRDKLTEEYAELKEELEDLR 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 358 QEALDLEIQMEKQRKEIAEKHEEIntvqlatdsldpkdpkhshmkaqkrgkeqqlDIMNRQYTQLESRLDEILCRIAKET 437
Cdd:TIGR02169 371 AELEEVDKEFAETRDELKDYREKL-------------------------------EKLKREINELKRELDRLQEELQRLS 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 438 EEIKDLEQQLTD--GQIAANEALKKDLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELELIA 515
Cdd:TIGR02169 420 EELADLNAAIAGieAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQA 499
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 516 MDAENMRKELAELESALQEQHE-VNASLQQAQGDLSAYETELET----QLKLKDAETSQLKQELEKLLRRTQLEQS---- 586
Cdd:TIGR02169 500 RASEERVRGGRAVEEVLKASIQgVHGTVAQLGSVGERYATAIEVaagnRLNNVVVEDDAVAKEAIELLKRRKAGRAtflp 579
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 587 ---VLQTELEKERESLRDALGKAQSSEEKQQennELRTQLKQLQDDnSLLKKQLKEFQNHLNHV-----------VDGLI 652
Cdd:TIGR02169 580 lnkMRDERRDLSILSEDGVIGFAVDLVEFDP---KYEPAFKYVFGD-TLVVEDIEAARRLMGKYrmvtlegelfeKSGAM 655
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 653 HPEEVAARVDELRKRlKLGAGEMRIHSPSDVLGKSLADLQKQFSEI-----LARSQWEKEEAQVRERKLHEEMALQQEKL 727
Cdd:TIGR02169 656 TGGSRAPRGGILFSR-SEPAELQRLRERLEGLKRELSSLQSELRRIenrldELSQELSDASRKIGEIEKEIEQLEQEEEK 734
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 728 ANGQ----EEFRQACERALEArIKFDKRQHNARIQQLENEIHYLQENLK------SMEKIQGLTDlQLQEADEEKERILA 797
Cdd:TIGR02169 735 LKERleelEEDLSSLEQEIEN-VKSELKELEARIEELEEDLHKLEEALNdlearlSHSRIPEIQA-ELSKLEEEVSRIEA 812
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 798 QLQELEKKKKREDARSQEqflgLDEELKSLK-KAVAASDKLAAAELTIAKDQLKslhgtvVRINQERAEELQEAER-FSR 875
Cdd:TIGR02169 813 RLREIEQKLNRLTLEKEY----LEKEIQELQeQRIDLKEQIKSIEKEIENLNGK------KEELEEELEELEAALRdLES 882
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720399285 876 EAMQAAKDLSRAEAEIELLQHLLREREGQFRDEMEN-ADLGAK--GANSQLLEIEALNEAMAKQRAEITRLRDV 946
Cdd:TIGR02169 883 RLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRlSELKAKleALEEELSEIEDPKGEDEEIPEEELSLEDV 956
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1819-2016 |
2.31e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 2.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1819 VTLEQQQRQLEkELTDQKSRLKQLLTDVSAAEGRLGTLQ--EEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQK 1896
Cdd:COG4913 245 EDAREQIELLE-PIRELAERYAAARERLAELEYLRAALRlwFAQRRLELLEAELEELRAELARLEAELERLEARLDALRE 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1897 EADDMRADfsllrnqflterkkAEKQVAGLKEALKIQRSQLEKNLLEQKQENSCMQKEMATIELVAQDNHERARRLMKEL 1976
Cdd:COG4913 324 ELDELEAQ--------------IRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEA 389
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1720399285 1977 SQMQQEYLELKKQVANQKD-LERRQMEVSDAMRTLKSEVKD 2016
Cdd:COG4913 390 AALLEALEEELEALEEALAeAEAALRDLRRELRELEAEIAS 430
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
284-450 |
2.42e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 2.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 284 DLQLEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQKKISEAEKDLLLKQLSGRLQHLNRLRQ-EALD 362
Cdd:COG1579 16 DSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEyEALQ 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 363 LEIQMEKQRKEIAEKHEEINTVQLATdsldpkdpkhshMKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKD 442
Cdd:COG1579 96 KEIESLKRRISDLEDEILELMERIEE------------LEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEA 163
|
....*...
gi 1720399285 443 LEQQLTDG 450
Cdd:COG1579 164 EREELAAK 171
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1435-1655 |
2.51e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 42.69 E-value: 2.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1435 LKSQVTSQQQELAVLDSELGHRREELLLLQDSL----AQAKADLQEALTLGETEVAEkcshIREVKSLLEELSFQKGELN 1510
Cdd:PHA02562 172 NKDKIRELNQQIQTLDMKIDHIQQQIKTYNKNIeeqrKKNGENIARKQNKYDELVEE----AKTIKAEIEELTDELLNLV 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1511 V-------HISEKKTQLALIQQEME---KEEKNLQ------VVLQQLSRHKTELKNVADilqlETSELQglklqhdQKVV 1574
Cdd:PHA02562 248 MdiedpsaALNKLNTAAAKIKSKIEqfqKVIKMYEkggvcpTCTQQISEGPDRITKIKD----KLKELQ-------HSLE 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1575 ELEKAQVDVLEEKLELENLQQATQQQRRELERQRQLLERDRRETERVRAESQALQSC-------VECLSKEKEDLQGQCE 1647
Cdd:PHA02562 317 KLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEfvdnaeeLAKLQDELDKIVKTKS 396
|
....*...
gi 1720399285 1648 SWEKKSSH 1655
Cdd:PHA02562 397 ELVKEKYH 404
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1555-1914 |
2.57e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.83 E-value: 2.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1555 LQLETSELQGLKLQHDQkVVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQLLErDRRETERVRAESQALQSCVEC 1634
Cdd:COG4717 73 LKELEEELKEAEEKEEE-YAELQEELEELEEELEELEAELEELREELEKLEKLLQLLP-LYQELEALEAELAELPERLEE 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1635 LSKEKEDLQGQCESWEKKSSHAQRvlAATEESNKMEQSNLGKLElSVRKLRQELEQLSQDKLALHSEVAEVQQQLQGKQE 1714
Cdd:COG4717 151 LEERLEELRELEEELEELEAELAE--LQEELEELLEQLSLATEE-ELQDLAEELEELQQRLAELEEELEEAQEELEELEE 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1715 AINSLQEELDSTQDHLDLAKQDLI----------------------------------------HTTKCQNELLNEQTQL 1754
Cdd:COG4717 228 ELEQLENELEAAALEERLKEARLLlliaaallallglggsllsliltiagvlflvlgllallflLLAREKASLGKEAEEL 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1755 QEDIS-------KWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQK--FEAGKVTLE--- 1822
Cdd:COG4717 308 QALPAleeleeeELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAalLAEAGVEDEeel 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1823 -------QQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGT------LQEEERRIEGLERMLSQAKQQLSEREQQL--MAK 1887
Cdd:COG4717 388 raaleqaEEYQELKEELEELEEQLEELLGELEELLEALDEeeleeeLEELEEELEELEEELEELREELAELEAELeqLEE 467
|
410 420
....*....|....*....|....*..
gi 1720399285 1888 SGELLALQKEADDMRADFSLLRNQFLT 1914
Cdd:COG4717 468 DGELAELLQELEELKAELRELAEEWAA 494
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1169-1690 |
2.60e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 43.09 E-value: 2.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1169 HNLENEVSRLEDIMQHLKSKQREErrqKASTQHSEEEVDGLHRDIDDLLQEKKELELEVEELHRTIERHQQRKDFIDGHV 1248
Cdd:TIGR04523 120 NKLEVELNKLEKQKKENKKNIDKF---LTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKL 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1249 ENLMTEL-EIEKSLKHHEDIVDEIECLEKTLLKRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDA 1327
Cdd:TIGR04523 197 LKLELLLsNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKEL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1328 EALEKRAQETalnlvkaEQQLRLLQADAEDLEQHkiKQEEILKEINKVVAAKDADFQCL-------NEKKEKLTEELQSL 1400
Cdd:TIGR04523 277 EQNNKKIKEL-------EKQLNQLKSEISDLNNQ--KEQDWNKELKSELKNQEKKLEEIqnqisqnNKIISQLNEQISQL 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1401 QRDIKAAQHSEDHHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRREELLLLQD---SLAQAKADLQEA 1477
Cdd:TIGR04523 348 KKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEqikKLQQEKELLEKE 427
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1478 LTLGETEVAEKCSHIREVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNVADILQL 1557
Cdd:TIGR04523 428 IERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKE 507
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1558 ETSELQGLKLQHD-----QKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQ----RQLLERDRRETERVRAESQAL 1628
Cdd:TIGR04523 508 LEEKVKDLTKKISslkekIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKEidekNKEIEELKQTQKSLKKKQEEK 587
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720399285 1629 QSCVECLSKEKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLELSVRKLRQELEQ 1690
Cdd:TIGR04523 588 QELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQ 649
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1856-2015 |
2.67e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 2.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1856 LQEEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDMRAdfsllrnqfltERKKAEKQVAGLKEALKIQRS 1935
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEK-----------EIKRLELEIEEVEARIKKYEE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1936 QLE--KNLLEQKQenscMQKEMATIELVAQDNHERARRLMKELSQMQQEYLELKKQVAN-QKDLERRQMEVSDAMRTLKS 2012
Cdd:COG1579 81 QLGnvRNNKEYEA----LQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAElEAELEEKKAELDEELAELEA 156
|
...
gi 1720399285 2013 EVK 2015
Cdd:COG1579 157 ELE 159
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
284-551 |
3.13e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.70 E-value: 3.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 284 DLQLEDTEKKISAAQTRLSELHHEIETAEQKVlratQEFKQLEEAIQqkkiSEAEKDLLLKQLSGRLQHLNRLRQEALDL 363
Cdd:COG3206 167 ELRREEARKALEFLEEQLPELRKELEEAEAAL----EEFRQKNGLVD----LSEEAKLLLQQLSELESQLAEARAELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 364 EIQMEKQRKEIAEKHEEINTVQlatdsldpkdpkhshmkaqkrgKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKDL 443
Cdd:COG3206 239 EARLAALRAQLGSGPDALPELL----------------------QSPVIQQLRAQLAELEAELAELSARYTPNHPDVIAL 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 444 EQQLtdgqiaanEALKKDLEgvisglqeylgtikgqaTQAQNECRKLQDEKETLLQRLTEVQQEKEELELIAMDAENMRK 523
Cdd:COG3206 297 RAQI--------AALRAQLQ-----------------QEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEA 351
|
250 260
....*....|....*....|....*...
gi 1720399285 524 ELAELESALQEQHEVNASLQQAQGDLSA 551
Cdd:COG3206 352 ELRRLEREVEVARELYESLLQRLEEARL 379
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1802-1947 |
3.17e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.46 E-value: 3.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1802 KLQKEREREEQKFEAgKVTLEQQQRQLEKELTDQKSRLKQLltdvsaaegrlgtlqeeERRIEGLERMLSQAKQQLSERE 1881
Cdd:PRK12704 48 KKEAEAIKKEALLEA-KEEIHKLRNEFEKELRERRNELQKL-----------------EKRLLQKEENLDRKLELLEKRE 109
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720399285 1882 QQLMAKSGELLALQKEADDMRADFSLLRNQfltERKKAEKqVAGL--KEALKIQRSQLEKNLLEQKQE 1947
Cdd:PRK12704 110 EELEKKEKELEQKQQELEKKEEELEELIEE---QLQELER-ISGLtaEEAKEILLEKVEEEARHEAAV 173
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
361-577 |
3.27e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 42.31 E-value: 3.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 361 LDLEI--QMEKQRKE-IAEKHEEINTVQLATDSLDPKdpkhshMKAQKRGKEQQLDIMNRQYTQLESRLDEILCriakET 437
Cdd:PHA02562 160 LDISVlsEMDKLNKDkIRELNQQIQTLDMKIDHIQQQ------IKTYNKNIEEQRKKNGENIARKQNKYDELVE----EA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 438 EEIKDLEQQLTDgQIAANEALKKDLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKE--TLLQ-------RLTEVQQEK 508
Cdd:PHA02562 230 KTIKAEIEELTD-ELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEKGGVcpTCTQqisegpdRITKIKDKL 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 509 EELELIAMDAENMRKELAELESALQEQ----HEVNASLQQAQGDLSAYET----------ELETQLKLKDAETSQLKQEL 574
Cdd:PHA02562 309 KELQHSLEKLDTAIDELEEIMDEFNEQskklLELKNKISTNKQSLITLVDkakkvkaaieELQAEFVDNAEELAKLQDEL 388
|
...
gi 1720399285 575 EKL 577
Cdd:PHA02562 389 DKI 391
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
502-618 |
3.28e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 42.51 E-value: 3.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 502 TEVQQEKEELELIAMDAENMRKEL----AELESALQEQHEVNASLQQAQGDLSAYETELETQLKLKDAE-TSQLKQELEK 576
Cdd:PRK00409 509 KLIGEDKEKLNELIASLEELERELeqkaEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEAEKEAQQaIKEAKKEADE 588
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1720399285 577 LLRRTQLEQSVLQT-----ELEKERESLRDALGKAQSSEEKQQENNE 618
Cdd:PRK00409 589 IIKELRQLQKGGYAsvkahELIEARKRLNKANEKKEKKKKKQKEKQE 635
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1753-1887 |
3.48e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.46 E-value: 3.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1753 QLQEDISKWMARLEscqKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAGKVTLEQQQRQLEKEL 1832
Cdd:PRK12704 61 EAKEEIHKLRNEFE---KELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELI 137
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 1833 TDQKSRLKqlltdvsaaegRLGTLQEEERRIEGLERMLSQAKQQLSEREQQLMAK 1887
Cdd:PRK12704 138 EEQLQELE-----------RISGLTAEEAKEILLEKVEEEARHEAAVLIKEIEEE 181
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1271-1460 |
3.49e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 3.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1271 IECLEKTLLKRRSELREADRLLAEAENELactkektksaveKFTDAKRNLLQTESDAEALEKRAQETALNLVKAEQQLRL 1350
Cdd:COG4913 612 LAALEAELAELEEELAEAEERLEALEAEL------------DALQERREALQRLAEYSWDEIDVASAEREIAELEAELER 679
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1351 LQADAEDLEQHKIKQEEILKEINKVVAAKDAdfqcLNEKKEKLTEELQSLQRDIKAAQHSEDHHLQVLR-ESETLLQAKR 1429
Cdd:COG4913 680 LDASSDDLAALEEQLEELEAELEELEEELDE----LKGEIGRLEKELEQAEEELDELQDRLEAAEDLARlELRALLEERF 755
|
170 180 190
....*....|....*....|....*....|....
gi 1720399285 1430 AEL---ETLKSQVTSQQQELAVLDSELGHRREEL 1460
Cdd:COG4913 756 AAAlgdAVERELRENLEERIDALRARLNRAEEEL 789
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1517-1891 |
3.63e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.59 E-value: 3.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1517 KTQLALI--QQEMEKEEKNLQVVLQQ-------LSRHKTEL----KNVADI---LQLETSELQGLKLQHDQKVVE-LEKA 1579
Cdd:PRK11281 42 QAQLDALnkQKLLEAEDKLVQQDLEQtlalldkIDRQKEETeqlkQQLAQApakLRQAQAELEALKDDNDEETREtLSTL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1580 QVDVLEEKLELENLQQATQQQrrELERQRQLLERDRRETERVRAE----SQALQSCVECLSKEKEDlqgqceswEKKSSH 1655
Cdd:PRK11281 122 SLRQLESRLAQTLDQLQNAQN--DLAEYNSQLVSLQTQPERAQAAlyanSQRLQQIRNLLKGGKVG--------GKALRP 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1656 AQRVLAATEESNKMEQSNLGKLELSVRKLRQELEQLSQDKLALHseVAEVQQQLQGKQEAINS--------------LQE 1721
Cdd:PRK11281 192 SQRVLLQAEQALLNAQNDLQRKSLEGNTQLQDLLQKQRDYLTAR--IQRLEHQLQLLQEAINSkrltlsektvqeaqSQD 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1722 ELDSTQDHLDLAK---------QDLIHTTkcqnELLNEQTQLQEDISKWMARLEscQKETETKEqQVQQLQDEIRESKLR 1792
Cdd:PRK11281 270 EAARIQANPLVAQeleinlqlsQRLLKAT----EKLNTLTQQNLRVKNWLDRLT--QSERNIKE-QISVLKGSLLLSRIL 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1793 LDQQemmfQKLQKEREREEQKFEAGKVTLEQ----QQRQlekELTDQKSRLKQLLTD----VSAAEGRLGTLQEEERRiE 1864
Cdd:PRK11281 343 YQQQ----QALPSADLIEGLADRIADLRLEQfeinQQRD---ALFQPDAYIDKLEAGhkseVTDEVRDALLQLLDERR-E 414
|
410 420 430
....*....|....*....|....*....|...
gi 1720399285 1865 GLERMLSQAKQQLSE------REQQLMAKSGEL 1891
Cdd:PRK11281 415 LLDQLNKQLNNQLNLainlqlNQQQLLSVSDSL 447
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
534-659 |
3.81e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 42.38 E-value: 3.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 534 EQHEVNASLQQAQGDLSAYETELETQLKLKDAETSQLKQELEKLLRRTQLEQSVLQTELEKERESLRDALGKAQSSEEKQ 613
Cdd:COG0542 405 EIDSKPEELDELERRLEQLEIEKEALKKEQDEASFERLAELRDELAELEEELEALKARWEAEKELIEEIQELKEELEQRY 484
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1720399285 614 QENNELRTQLKQLQDDNSLLKKQLKEfqnhlnhVVDglihPEEVAA 659
Cdd:COG0542 485 GKIPELEKELAELEEELAELAPLLRE-------EVT----EEDIAE 519
|
|
| PRK11637 |
PRK11637 |
AmiB activator; Provisional |
1680-1891 |
3.82e-03 |
|
AmiB activator; Provisional
Pssm-ID: 236942 [Multi-domain] Cd Length: 428 Bit Score: 41.99 E-value: 3.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1680 SVRKLRQELEQLSQDKLALHSEVAEVQQQlQGKQEAINSLQeeldstqdhLDLAKQDLIHTTkCQNELLNEQTQLQEDIS 1759
Cdd:PRK11637 90 KLRETQNTLNQLNKQIDELNASIAKLEQQ-QAAQERLLAAQ---------LDAAFRQGEHTG-LQLILSGEESQRGERIL 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1760 KWM-----ARLESCQKETETKE---QQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREEQKFEAGKVTLEQQQRQLeKE 1831
Cdd:PRK11637 159 AYFgylnqARQETIAELKQTREelaAQKAELEEKQSQQKTLLYEQQAQQQKLEQARNERKKTLTGLESSLQKDQQQL-SE 237
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720399285 1832 LTDQKSRLK-QLLTDVSAAEGRlgtLQEEERRIEGLERMLSQAKQ-----QLSEREQQLMAKSGEL 1891
Cdd:PRK11637 238 LRANESRLRdSIARAEREAKAR---AEREAREAARVRDKQKQAKRkgstyKPTESERSLMSRTGGL 300
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
479-729 |
4.22e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 4.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 479 QATQAQNECRKLQDEKETLLQRLTEVQQEKEELELiamDAENMRKELAELESALQEQHEVNASLQQAQGDLSAYETELET 558
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLK---QLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 559 QLKlkdaetsQLKQELEKLLRRTQLEQSVLQTELEKERESLRDALGKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLK 638
Cdd:COG4942 98 ELE-------AQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 639 EFQNHLnhvvdglihpEEVAARVDELRKRLKLGAGEMRihspsdvlgKSLADLQKQFSEILARSQwEKEEAQVRERKLHE 718
Cdd:COG4942 171 AERAEL----------EALLAELEEERAALEALKAERQ---------KLLARLEKELAELAAELA-ELQQEAEELEALIA 230
|
250
....*....|.
gi 1720399285 719 EMALQQEKLAN 729
Cdd:COG4942 231 RLEAEAAAAAE 241
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
1390-1844 |
4.27e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 42.35 E-value: 4.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1390 KEKLTEELQSLQRDIKAAQhsedhhlqvLRESETLLQAKRAELETLKSQVTSQQQELAV-----LDSELghrREELLLLQ 1464
Cdd:PRK10929 25 EKQITQELEQAKAAKTPAQ---------AEIVEALQSALNWLEERKGSLERAKQYQQVIdnfpkLSAEL---RQQLNNER 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1465 DSLAQAKADLQ-EALtlgETEVAEKCSHIREVKSLLEelsfQKGELNVHISEKKTQLALIQQEMEKEEKNLQVVLQQLSR 1543
Cdd:PRK10929 93 DEPRSVPPNMStDAL---EQEILQVSSQLLEKSRQAQ----QEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQTLGT 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1544 HKTELKnvadilQLETSELQGLKLQHDQKVVELEKAQVdvleeklelenlqqaTQQQRRELERQRqlLERDRRETERVRA 1623
Cdd:PRK10929 166 PNTPLA------QAQLTALQAESAALKALVDELELAQL---------------SANNRQELARLR--SELAKKRSQQLDA 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1624 ESQALQSCVECLSKEKedlqgqceswekksshAQRVLAATE----ESNKMEQSNLGKLELSvRKLRQELEQLSQ--DKLA 1697
Cdd:PRK10929 223 YLQALRNQLNSQRQRE----------------AERALESTEllaeQSGDLPKSIVAQFKIN-RELSQALNQQAQrmDLIA 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1698 LHSEVAeVQQQLQGKQeAINSLQEeldstqdhldlakqdlihttkcQNELLNEQTQLQEDISKWMARLESCQKEtetkeq 1777
Cdd:PRK10929 286 SQQRQA-ASQTLQVRQ-ALNTLRE----------------------QSQWLGVSNALGEALRAQVARLPEMPKP------ 335
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720399285 1778 qvQQLQDEIRESKLRLDQQEMMFQKLQKEREreeQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLLT 1844
Cdd:PRK10929 336 --QQLDTEMAQLRVQRLRYEDLLNKQPQLRQ---IRQADGQPLTAEQNRILDAQLRTQRELLNSLLS 397
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1450-2036 |
4.36e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.47 E-value: 4.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1450 DSELGHRREELLLLQDSLAQAKADLQEaltlgeteVAEKCSHIREVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEK 1529
Cdd:pfam01576 4 EEEMQAKEEELQKVKERQQKAESELKE--------LEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEE 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1530 eeknlqvVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQ 1609
Cdd:pfam01576 76 -------ILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNS 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1610 LLERDRRETERVRAEsqalqsCVECLSKEKEdlqgQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLELSVRKLRQELE 1689
Cdd:pfam01576 149 KLSKERKLLEERISE------FTSNLAEEEE----KAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGEST 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1690 QLSQDKLALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLihttkcqNELLNEQTQLQEDISKWMARLESCQ 1769
Cdd:pfam01576 219 DLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKI-------RELEAQISELQEDLESERAARNKAE 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1770 KETETKEQQVQQLQDEIRESklrLD----QQEMMFQK------LQKEREREEQKFEAGKVTLEQQQRQLEKELTDQksrL 1839
Cdd:pfam01576 292 KQRRDLGEELEALKTELEDT---LDttaaQQELRSKReqevteLKKALEEETRSHEAQLQEMRQKHTQALEELTEQ---L 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1840 KQLLTDVSAAEGRLGTLQEEERRIEGLERMLSQAKQQLSEREQQLMAKSGELLALQKEADDMRADF-------------- 1905
Cdd:pfam01576 366 EQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELaeklsklqselesv 445
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1906 SLLRNQFLTERKKAEKQVAGLKEALKIQRSQLEKNlLEQKQENSC----MQKEMATIELVAQDNHERARRLMKELSQMQQ 1981
Cdd:pfam01576 446 SSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEE-TRQKLNLSTrlrqLEDERNSLQEQLEEEEEAKRNVERQLSTLQA 524
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720399285 1982 EYLELKKQV--------ANQKDLERRQMEVSDAMRTL--KSEVKDEIRTSLRNLNQFLPELPADL 2036
Cdd:pfam01576 525 QLSDMKKKLeedagtleALEEGKKRLQRELEALTQQLeeKAAAYDKLEKTKNRLQQELDDLLVDL 589
|
|
| CusB_dom_1 |
pfam00529 |
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli ... |
1671-1842 |
5.14e-03 |
|
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli can be divided into four different domains, the first three domains of the protein are mostly beta-strands and the fourth forms an all alpha-helical domain. This entry represents the first beta-domain (domain 1) of CusB and it is formed by the N and C-terminal ends of the polypeptide (residues 89-102 and 324-385). CusB is part of the copper-transporting efflux system CusCFBA. This domain can also be found in other membrane-fusion proteins, such as HlyD, MdtN, MdtE and AaeA. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.
Pssm-ID: 425733 [Multi-domain] Cd Length: 322 Bit Score: 41.25 E-value: 5.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1671 QSNLGKLELSVRKLRQELEQLSqdklALHSEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTtkcqnellnE 1750
Cdd:pfam00529 64 EAQLAKAQAQVARLQAELDRLQ----ALESELAISRQDYDGATAQLRAAQAAVKAAQAQLAQAQIDLARR---------R 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1751 QTQLQEDISKwmarlescqKETETKEQQVQQLQDEIRESKLRLDQQEMMFQKLQKEREREeqkFEAGKVTLEQQQRQLEK 1830
Cdd:pfam00529 131 VLAPIGGISR---------ESLVTAGALVAQAQANLLATVAQLDQIYVQITQSAAENQAE---VRSELSGAQLQIAEAEA 198
|
170
....*....|..
gi 1720399285 1831 ELTDQKSRLKQL 1842
Cdd:pfam00529 199 ELKLAKLDLERT 210
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
288-385 |
5.20e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.69 E-value: 5.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 288 EDTEKKISAAQTRLSELHHEIET-AEQKVLRATQEFKQlEEAIQQKKISEAEKDLLLK--QLSGRLQHLNRLRQEALDLE 364
Cdd:PRK12704 38 EEAKRILEEAKKEAEAIKKEALLeAKEEIHKLRNEFEK-ELRERRNELQKLEKRLLQKeeNLDRKLELLEKREEELEKKE 116
|
90 100
....*....|....*....|.
gi 1720399285 365 IQMEKQRKEIAEKHEEINTVQ 385
Cdd:PRK12704 117 KELEQKQQELEKKEEELEELI 137
|
|
| HMMR_N |
pfam15905 |
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of ... |
457-615 |
5.31e-03 |
|
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of eukaryotic hyaluronan-mediated motility receptor proteins. The protein is functionally associated with BRCA1 and thus predicted to be a common, low-penetrance breast cancer candidate.
Pssm-ID: 464932 [Multi-domain] Cd Length: 329 Bit Score: 41.34 E-value: 5.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 457 ALKKDLEGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELELIAMDAENMRKELAELESALQEQH 536
Cdd:pfam15905 177 AKQEGMEGKLQVTQKNLEHSKGKVAQLEEKLVSTEKEKIEEKSETEKLLEYITELSCVSEQVEKYKLDIAQLEELLKEKN 256
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720399285 537 EVNASLQQaqgDLSAYETELETQLKLKDAETSQLKQELEKLLRRTQLEQSVLQTELEKERESLRDalgKAQSSEEKQQE 615
Cdd:pfam15905 257 DEIESLKQ---SLEEKEQELSKQIKDLNEKCKLLESEKEELLREYEEKEQTLNAELEELKEKLTL---EEQEHQKLQQK 329
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
327-940 |
5.36e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 41.88 E-value: 5.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 327 EAIQQKKISEAEKDLLLKQLSGRLQHLNRLRQEALDLEIQMEKQRKEIAEKHEEIntvqlatdsldpkdpKHSHMK-AQK 405
Cdd:TIGR00618 184 MEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQT---------------QQSHAYlTQK 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 406 RGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKDLEQQLTDGQIAANEA----LKKDLEGVISGLQEYLGTI----- 476
Cdd:TIGR00618 249 REAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKavtqIEQQAQRIHTELQSKMRSRakllm 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 477 KGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELELIAMDAENMRKELAELESALQEQHEVNASLQQAQGDLSAYETEL 556
Cdd:TIGR00618 329 KRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQRE 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 557 ETQLKLKDAETSQLKQELEKLLRRTQLEQSVLQTELEKERESLRDALGKAQSSEEKQQENNELRTQLKQLQ-------DD 629
Cdd:TIGR00618 409 QATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEqihlqetRK 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 630 NSLLKKQLKEFQNHLNHVVDGLIHPEEVAARVDELRKRLKLGAGEMRIHSPsdvLGKSLADLQKQFSEILARSQWEKEEA 709
Cdd:TIGR00618 489 KAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQ---LETSEEDVYHQLTSERKQRASLKEQM 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 710 QvreRKLHEEMALQQ---------EKLANGQEEFRQACERALEARIKfdkrqhnariQQLENEIHYLQENLKSMEKIQGL 780
Cdd:TIGR00618 566 Q---EIQQSFSILTQcdnrskediPNLQNITVRLQDLTEKLSEAEDM----------LACEQHALLRKLQPEQDLQDVRL 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 781 TDLQLQEADEEKERILAQLQ-ELEKKKKREDARSQEQFlgldeelkslKKAVAASDKLAAAELTIAKDQLKSLHGTVVRI 859
Cdd:TIGR00618 633 HLQQCSQELALKLTALHALQlTLTQERVREHALSIRVL----------PKELLASRQLALQKMQSEKEQLTYWKEMLAQC 702
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 860 NQERAEELQEAERFSREAMQAAKDLSRAEAEIE----LLQHLLREREGQFRDEMENADLGAKGANSQLLEIEALNEAMAK 935
Cdd:TIGR00618 703 QTLLRELETHIEEYDREFNEIENASSSLGSDLAaredALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSH 782
|
....*
gi 1720399285 936 QRAEI 940
Cdd:TIGR00618 783 LAAEI 787
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1165-1789 |
5.83e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 41.81 E-value: 5.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1165 IPEHHNLENEVSRLEDIMQHLKSKQREERRQKASTQHSEEEVDGLHRDIDDLLQEKKELELEVEELHRTIERHQQRKDFI 1244
Cdd:PRK01156 158 ILEINSLERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNL 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1245 DGHVENLMTELEIEKSLkhhEDIVDEIECLEKTLLKRRSELREADRLLAEAENELACtkeKTKSAVEKFTDAKRNLLQTE 1324
Cdd:PRK01156 238 KSALNELSSLEDMKNRY---ESEIKTAESDLSMELEKNNYYKELEERHMKIINDPVY---KNRNYINDYFKYKNDIENKK 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1325 SDAEALEKRAQETALNLVKAEQqlrlLQADAEDLEQHKIKQEEILKEINKVVAAKDaDFQCLNEKKEKLTEELQSLQRDI 1404
Cdd:PRK01156 312 QILSNIDAEINKYHAIIKKLSV----LQKDYNDYIKKKSRYDDLNNQILELEGYEM-DYNSYLKSIESLKKKIEEYSKNI 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1405 KAAQHSEDHHLQVLRESETLLQAKRAE----LETLKSQVTSQQQELAVLDSELGHRREELLLLQdslAQAKADLQeALTL 1480
Cdd:PRK01156 387 ERMSAFISEILKIQEIDPDAIKKELNEinvkLQDISSKVSSLNQRIRALRENLDELSRNMEMLN---GQSVCPVC-GTTL 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1481 GEtevaEKCSHIREvkslleelsfqkgelnvHISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKTELkNVADILQLETS 1560
Cdd:PRK01156 463 GE----EKSNHIIN-----------------HYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYL-ESEEINKSINE 520
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1561 ELQGLKLQHDqkvveLEKAQVDVLEEKLELENLQQATQQQrreleRQRQLLERDRRETERVRAESQALQSCVECLSKEKE 1640
Cdd:PRK01156 521 YNKIESARAD-----LEDIKIKINELKDKHDKYEEIKNRY-----KSLKLEDLDSKRTSWLNALAVISLIDIETNRSRSN 590
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1641 DLQGQCESWEKKSshaQRVLAATEESNKMEQSNLGKLELSVRKLRQELEQLSQDKLA---LHSEVAEVQQQLQGKQEAIN 1717
Cdd:PRK01156 591 EIKKQLNDLESRL---QEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILiekLRGKIDNYKKQIAEIDSIIP 667
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720399285 1718 SLQE---ELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQD--EIRES 1789
Cdd:PRK01156 668 DLKEitsRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINETLESMKKIKKAIGDlkRLREA 744
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1294-1611 |
6.04e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.43 E-value: 6.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1294 EAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEKRAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEILKEIN 1373
Cdd:COG4372 14 SLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQ 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1374 KVVAAKDADFQCLNEKKEKLTEELQSLQRDIKAAQHSEDHHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSEL 1453
Cdd:COG4372 94 AELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQEL 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1454 ghRREELLLLQDSLAQAKADLQEALTLGETEVAEKCSHIREVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEKN 1533
Cdd:COG4372 174 --QALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEEL 251
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720399285 1534 LQVVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQATQQQRRELERQRQLL 1611
Cdd:COG4372 252 LEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLE 329
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
287-648 |
6.16e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 41.75 E-value: 6.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 287 LEDTEKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAiqqkkiseaekdllLKQLSGRLQHLNRLRQEALDLEIQ 366
Cdd:pfam12128 613 LQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLD--------------LRRLFDEKQSEKDKKNKALAERKD 678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 367 MEKQRKEIAEKHEEINtvqlatdsldpkDPKHSHMKAQKRGKEQQLDIMNRQYTQlesrldeilcriakETEEIKDLEQQ 446
Cdd:pfam12128 679 SANERLNSLEAQLKQL------------DKKHQAWLEEQKEQKREARTEKQAYWQ--------------VVEGALDAQLA 732
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 447 LTDGQIAANEALKKdlegvisglqeylGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELELIAMDaenmRKELA 526
Cdd:pfam12128 733 LLKAAIAARRSGAK-------------AELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVR----RQEVL 795
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 527 ELESALQEQHEV-NASLQQAQGDLSAYETELETQLKLKDAETSQLKQELEKLLRRTQLEQSVLQTELEKERESLR--DAL 603
Cdd:pfam12128 796 RYFDWYQETWLQrRPRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSklATL 875
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1720399285 604 GKAQSSEEKQQENNELRTQLKQLQDDNSLLKKQLKEFQNHLNHVV 648
Cdd:pfam12128 876 KEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKKYVEHFKNVI 920
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
291-812 |
6.24e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 6.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 291 EKKISAAQTRLSELHHEIETAEQKVLRATQEFKQLEEAIQQ---KKISEAEKDL--LLKQLSGRLQHLNRLRQEALDLEI 365
Cdd:COG4913 294 EAELEELRAELARLEAELERLEARLDALREELDELEAQIRGnggDRLEQLEREIerLERELEERERRRARLEALLAALGL 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 366 QMEKQRKEIAEKHEEIntvqlatdsldpkdpkhshmKAQKRGKEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKDLEQ 445
Cdd:COG4913 374 PLPASAEEFAALRAEA--------------------AALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLER 433
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 446 Q---LTDGQIAANEALKKDLEGVISGLQ---EYLgtikgqatQAQNECRKLQDEKETLL--QRLT---EVQQEKEELELI 514
Cdd:COG4913 434 RksnIPARLLALRDALAEALGLDEAELPfvgELI--------EVRPEEERWRGAIERVLggFALTllvPPEHYAAALRWV 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 515 amDAENMRKEL--AELESALQEQHEVNAS-------LQQAQGDLSAY-ETEL---------ETQLKLKDAETS-----QL 570
Cdd:COG4913 506 --NRLHLRGRLvyERVRTGLPDPERPRLDpdslagkLDFKPHPFRAWlEAELgrrfdyvcvDSPEELRRHPRAitragQV 583
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 571 KQEL---EKLLRRTQLEQSVLQ-------TELEKERESLRDALGKAQSS----EEKQQENNELRTQLKQLQD------DN 630
Cdd:COG4913 584 KGNGtrhEKDDRRRIRSRYVLGfdnraklAALEAELAELEEELAEAEERlealEAELDALQERREALQRLAEyswdeiDV 663
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 631 SLLKKQLKEFQNHLNHVVDGLIHPEEVAARVDELRKRLKlgagemRIHSPSDVLGKSLADLQKQfseilaRSQWEKEEAQ 710
Cdd:COG4913 664 ASAEREIAELEAELERLDASSDDLAALEEQLEELEAELE------ELEEELDELKGEIGRLEKE------LEQAEEELDE 731
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 711 VRERKLHEEMALQQEKLANGQEEFRQACERALEARIkfdKRQHNARIQQLENEIHYLQENL-KSMEKIQGLTDLQLQEAD 789
Cdd:COG4913 732 LQDRLEAAEDLARLELRALLEERFAAALGDAVEREL---RENLEERIDALRARLNRAEEELeRAMRAFNREWPAETADLD 808
|
570 580
....*....|....*....|....*....
gi 1720399285 790 ------EEKERILAQLQELEKKKKREDAR 812
Cdd:COG4913 809 adleslPEYLALLDRLEEDGLPEYEERFK 837
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
90-563 |
6.24e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 42.03 E-value: 6.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 90 HLRSLESLEGQPVTTQDRQEAFERFSLEEIERLEKDLEKKTVETEELKNKQTKFLEEIKNQDK--------LNKSLKEEA 161
Cdd:pfam15921 315 YMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDqlqklladLHKREKELS 394
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 162 MLQKQSCEELESDLSTK------KELLKQKTVELTR----------ACQKQyeLEQELAfyKIDAKFEPLNYYPSEYAEI 225
Cdd:pfam15921 395 LEKEQNKRLWDRDTGNSitidhlRRELDDRNMEVQRleallkamksECQGQ--MERQMA--AIQGKNESLEKVSSLTAQL 470
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 226 DKYPDESPYIGKSRYKRNM-FATETYIVSDAQA-VQIRKMVPEGGQlrHEHTPPRVQAPPDLQ-----------LEDTEK 292
Cdd:pfam15921 471 ESTKEMLRKVVEELTAKKMtLESSERTVSDLTAsLQEKERAIEATN--AEITKLRSRVDLKLQelqhlknegdhLRNVQT 548
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 293 KISAAQTRLSELHHEIETAEQKVLRATQ--------------EFKQLEEAI-------QQKKISEAEKDLLLKQLSGRLQ 351
Cdd:pfam15921 549 ECEALKLQMAEKDKVIEILRQQIENMTQlvgqhgrtagamqvEKAQLEKEIndrrlelQEFKILKDKKDAKIRELEARVS 628
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 352 HLNRLRQEALDLEIQMEKQRKEIAEKHEEI-NTVQLATDSLDPKDPKHSHMKAQKRGKEQQLDIM-NRQYTQLESRLDEI 429
Cdd:pfam15921 629 DLELEKVKLVNAGSERLRAVKDIKQERDQLlNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTtNKLKMQLKSAQSEL 708
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 430 lcriAKETEEIKDLEQqlTDGQ-IAANEALKKDL---EGVISGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQ 505
Cdd:pfam15921 709 ----EQTRNTLKSMEG--SDGHaMKVAMGMQKQItakRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVA 782
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720399285 506 QEKE----ELELIAMDAENMRKELAELESALQEqhevnASLQQAQ-GDLSAYETELETQLKLK 563
Cdd:pfam15921 783 TEKNkmagELEVLRSQERRLKEKVANMEVALDK-----ASLQFAEcQDIIQRQEQESVRLKLQ 840
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
634-948 |
6.30e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.86 E-value: 6.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 634 KKQLKEFQNHLNHVVDGLihpEEVAARVDELrkrlklgagEMRIHSPSDVLGKSLADLQKQfsEILARSQWEKEEAQVRE 713
Cdd:COG3096 298 RRQLAEEQYRLVEMAREL---EELSARESDL---------EQDYQAASDHLNLVQTALRQQ--EKIERYQEDLEELTERL 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 714 RKLHEEMALQQEKLANGQEEFRQACERALEARIKFDKRQHNARIQQLENeIHYLQ--ENLKSMEKIQGLTDLQLQEADEE 791
Cdd:COG3096 364 EEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRA-IQYQQavQALEKARALCGLPDLTPENAEDY 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 792 KERILAQLQELEkkkkrEDARSQEQFLGL--------DEELKSLKKAVAASDKLAAAE-----LTIAKDQlKSLHGTVVR 858
Cdd:COG3096 443 LAAFRAKEQQAT-----EEVLELEQKLSVadaarrqfEKAYELVCKIAGEVERSQAWQtarelLRRYRSQ-QALAQRLQQ 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 859 INQE------RAEELQEAERFSRE-AMQAAKDLSRAEaEIELLQHLLREREGQFRDEMENADLGAKGANSQLLEIEALNE 931
Cdd:COG3096 517 LRAQlaeleqRLRQQQNAERLLEEfCQRIGQQLDAAE-ELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIK 595
|
330
....*....|....*..
gi 1720399285 932 AMAKQRAEITRLRDVLN 948
Cdd:COG3096 596 ELAARAPAWLAAQDALE 612
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
689-807 |
6.96e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 41.74 E-value: 6.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 689 ADLQKQfsEILARSQWEKEEAQVRE-RKLHEEMALQQEKLangQEEFRQACERAlearikfdKRQHNARIQQLENEIHYL 767
Cdd:PRK00409 523 ASLEEL--ERELEQKAEEAEALLKEaEKLKEELEEKKEKL---QEEEDKLLEEA--------EKEAQQAIKEAKKEADEI 589
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1720399285 768 QENLKSMEKiQGLTDLQLQEADEEKERILAQLQELEKKKK 807
Cdd:PRK00409 590 IKELRQLQK-GGYASVKAHELIEARKRLNKANEKKEKKKK 628
|
|
| DUF3450 |
pfam11932 |
Protein of unknown function (DUF3450); This family of proteins are functionally ... |
1752-1899 |
6.98e-03 |
|
Protein of unknown function (DUF3450); This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are about 260 amino acids in length.
Pssm-ID: 432198 [Multi-domain] Cd Length: 238 Bit Score: 40.29 E-value: 6.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1752 TQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRL-------DQQEMMFQKLQKEREREEQKFEagkvTLEQQ 1824
Cdd:pfam11932 16 DQALDLAEKAVAAAAQSQKKIDKWDDEKQELLAEYRALKAELeslevynRQLERLVASQEQEIASLERQIE----EIERT 91
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720399285 1825 QRQLEKELTDQKSRLKQLLtdvsaaEGRLGTLQEE-ERRIEGLERMLSQAKQQLSEREQQLMAksgellALQKEAD 1899
Cdd:pfam11932 92 ERELVPLMLKMLDRLEQFV------ALDLPFLLEErQARLARLRELMDDADVSLAEKYRRILE------AYQVEAE 155
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1279-1617 |
7.03e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.86 E-value: 7.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1279 LKRRSELREADRLLAEAENELACTKEKTKSAVEKFTDAKRNLLQTESDAEALEKRAQETA--LNLV----KAEQQLRLLQ 1352
Cdd:COG3096 274 MRHANERRELSERALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASdhLNLVqtalRQQEKIERYQ 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1353 ADAEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEELQSLQRDIKAAQHSEDHH---LQVLRESETLLQAKR 1429
Cdd:COG3096 354 EDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRAIQYqqaVQALEKARALCGLPD 433
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1430 AELETLKSQVTSQQQELAVLDSELGHRREELlllqdSLAQ-AKADLQEALTL-----GETEVAEKCSHIREvksLLEELS 1503
Cdd:COG3096 434 LTPENAEDYLAAFRAKEQQATEEVLELEQKL-----SVADaARRQFEKAYELvckiaGEVERSQAWQTARE---LLRRYR 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1504 FQKgelnvHISEKKTQLALIQQEMEK---EEKNLQVVLQQLSRHKTELKNVADILQLETSELQGLKLQHDQKVVELekaq 1580
Cdd:COG3096 506 SQQ-----ALAQRLQQLRAQLAELEQrlrQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEA---- 576
|
330 340 350
....*....|....*....|....*....|....*..
gi 1720399285 1581 vdvleeklelenlqqatQQQRRELERQRQLLERDRRE 1617
Cdd:COG3096 577 -----------------VEQRSELRQQLEQLRARIKE 596
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
405-745 |
7.56e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.48 E-value: 7.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 405 KRGKEQQLDIMNRQYTQLESRLDEIlcriAKETEEIKDLEQQLTDgQIAANEAL--KKDLEGVISGLQEYLGTIKGQATQ 482
Cdd:PRK04863 781 RAAREKRIEQLRAEREELAERYATL----SFDVQKLQRLHQAFSR-FIGSHLAVafEADPEAELRQLNRRRVELERALAD 855
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 483 AQNECRKLQDEKETLLQRLTEVQQEKEELELIamDAENMRKELAELESALQEQHEVNASLQQAQGDLSAYETELETqLKL 562
Cdd:PRK04863 856 HESQEQQQRSQLEQAKEGLSALNRLLPRLNLL--ADETLADRVEEIREQLDEAEEAKRFVQQHGNALAQLEPIVSV-LQS 932
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 563 KDAETSQLKQELEKLlrRTQLEQSVLQTELEKERESLRDALGKAQSSE--EKQQENNE-LRTQLKQLQDDNSLLKKQLKE 639
Cdd:PRK04863 933 DPEQFEQLKQDYQQA--QQTQRDAKQQAFALTEVVQRRAHFSYEDAAEmlAKNSDLNEkLRQRLEQAEQERTRAREQLRQ 1010
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 640 FQNHL---NHVVDGLIHPEEVAAR-VDELRKRLKlgagEMRIHSPSDVLGKSLADlQKQFSEILARSQWEKEEAQVRERK 715
Cdd:PRK04863 1011 AQAQLaqyNQVLASLKSSYDAKRQmLQELKQELQ----DLGVPADSGAEERARAR-RDELHARLSANRSRRNQLEKQLTF 1085
|
330 340 350
....*....|....*....|....*....|
gi 1720399285 716 LHEEMALQQEKLANGQEEFRQACERALEAR 745
Cdd:PRK04863 1086 CEAEMDNLTKKLRKLERDYHEMREQVVNAK 1115
|
|
| HOOK |
pfam05622 |
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from ... |
1638-2013 |
7.62e-03 |
|
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organizms. The different members of the human gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three human HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas this central coiled-coil motif mediates homodimerization and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes, whereas both HOOK1 and HOOK2 are localized to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head. This entry includes the central coiled-coiled domain and the divergent C-terminal domain.
Pssm-ID: 461694 [Multi-domain] Cd Length: 528 Bit Score: 41.21 E-value: 7.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1638 EKEDLQGQCESWEKKSSHAQRVLAATEESNKMEQSNLGKLE-------LSVRK---LRQELEQL---------SQDKLAL 1698
Cdd:pfam05622 8 EKDELAQRCHELDQQVSLLQEEKNSLQQENKKLQERLDQLEsgddsgtPGGKKyllLQKQLEQLqeenfrletARDDYRI 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1699 HSEVAEVQ-QQLQGKQEAINSLQEELDSTQDHLDLAKQDlihttkcqnellneqtqlQEDISKWMARLESCQKETEtkeq 1777
Cdd:pfam05622 88 KCEELEKEvLELQHRNEELTSLAEEAQALKDEMDILRES------------------SDKVKKLEATVETYKKKLE---- 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1778 qvqQLQDEIRESKLrLDQQEMMFQKLQKEREREEQKFEAGKVTLEQQQRQ---LEKELTDQKSRLKQLLTDVSAAEGRLG 1854
Cdd:pfam05622 146 ---DLGDLRRQVKL-LEERNAEYMQRTLQLEEELKKANALRGQLETYKRQvqeLHGKLSEESKKADKLEFEYKKLEEKLE 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1855 TLQEEERRIeglermlsqakqqLSEREQqLMAKSGELLALQKEADDM-RADFSLLRNQFLTERKKAEKQVAGLKEalKIQ 1933
Cdd:pfam05622 222 ALQKEKERL-------------IIERDT-LRETNEELRCAQLQQAELsQADALLSPSSDPGDNLAAEIMPAEIRE--KLI 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1934 RSQLEKNLLEQKQENSCMQKEMATIELVaQDNHERARRLMKELSQMQQEYLELKKQVANQKDLERRQMEVSDAMRTLKSE 2013
Cdd:pfam05622 286 RLQHENKMLRLGQEGSYRERLTELQQLL-EDANRRKNELETQNRLANQRILELQQQVEELQKALQEQGSKAEDSSLLKQK 364
|
|
| HOOK |
pfam05622 |
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from ... |
1409-1903 |
7.62e-03 |
|
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organizms. The different members of the human gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three human HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas this central coiled-coil motif mediates homodimerization and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes, whereas both HOOK1 and HOOK2 are localized to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head. This entry includes the central coiled-coiled domain and the divergent C-terminal domain.
Pssm-ID: 461694 [Multi-domain] Cd Length: 528 Bit Score: 41.21 E-value: 7.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1409 HSEDHHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRREELLLLQDSLAQ---AKADLQEALTLGETEV 1485
Cdd:pfam05622 17 HELDQQVSLLQEEKNSLQQENKKLQERLDQLESGDDSGTPGGKKYLLLQKQLEQLQEENFRletARDDYRIKCEELEKEV 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1486 AEKCSHIREVKSLLEELSFQKGELNV--HISEK----KTQLALIQQEMEK-----------EEKNLQVVLQQLSRHKTEL 1548
Cdd:pfam05622 97 LELQHRNEELTSLAEEAQALKDEMDIlrESSDKvkklEATVETYKKKLEDlgdlrrqvkllEERNAEYMQRTLQLEEELK 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1549 KNVADILQLET--SELQGLKLQHDQKVVELEKAQVDVLEEKLELENLQQatqqqrrelERQRQLLERDR-RETERVRAES 1625
Cdd:pfam05622 177 KANALRGQLETykRQVQELHGKLSEESKKADKLEFEYKKLEEKLEALQK---------EKERLIIERDTlRETNEELRCA 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1626 QALQSCVeclskekedlqGQCESWEKKSSHAQRVLAATEESNKMEQSnLGKLELSVRKLRQELEQLSQDKLAlhsevaEV 1705
Cdd:pfam05622 248 QLQQAEL-----------SQADALLSPSSDPGDNLAAEIMPAEIREK-LIRLQHENKMLRLGQEGSYRERLT------EL 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1706 QQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCqnelLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDE 1785
Cdd:pfam05622 310 QQLLEDANRRKNELETQNRLANQRILELQQQVEELQKA----LQEQGSKAEDSSLLKQKLEEHLEKLHEAQSELQKKKEQ 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1786 IRESKLRLDQQemMFQKLQKEREREEQKFEAGKVTLEQQQRQLEKELTDQKSrLKQLLTDVSAAEGRL--GTLQEEERRI 1863
Cdd:pfam05622 386 IEELEPKQDSN--LAQKIDELQEALRKKDEDMKAMEERYKKYVEKAKSVIKT-LDPKQNPASPPEIQAlkNQLLEKDKKI 462
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 1720399285 1864 EGLERMLSQAKQQlSEREQQLMAKS--GELLALQKEADDMRA 1903
Cdd:pfam05622 463 EHLERDFEKSKLQ-REQEEKLIVTAwyNMGMALHRKAIEERL 503
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1822-2053 |
8.50e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 41.60 E-value: 8.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1822 EQQQRQLEKELTDQKSR-LKQLLTDVSAAEGRLGTLQEEERRIEGLERMLsQAKQQLSEREQQlmAKSGELLA-----LQ 1895
Cdd:COG5022 829 EKKLRETEEVEFSLKAEvLIQKFGRSLKAKKRFSLLKKETIYLQSAQRVE-LAERQLQELKID--VKSISSLKlvnleLE 905
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1896 KEADDMRADFS---LLRNQFLTERKKAEKQV---AGLKEALKIQRSQLEKnLLEQKQENSCMQKEMATIELVAQDNHERA 1969
Cdd:COG5022 906 SEIIELKKSLSsdlIENLEFKTELIARLKKLlnnIDLEEGPSIEYVKLPE-LNKLHEVESKLKETSEEYEDLLKKSTILV 984
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1970 RRLMKELSQMQQEYLELKKQVANQKDLER--RQMEVSDAMRTLKSEVKDEIRTSLRNLNQFLPELPADLASILERNENLR 2047
Cdd:COG5022 985 REGNKANSELKNFKKELAELSKQYGALQEstKQLKELPVEVAELQSASKIISSESTELSILKPLQKLKGLLLLENNQLQA 1064
|
....*.
gi 1720399285 2048 ELESLK 2053
Cdd:COG5022 1065 RYKALK 1070
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
408-934 |
8.71e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 41.31 E-value: 8.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 408 KEQQLDIMNRQYTQLESRLDEILCRIAKETEEIKDLEQQLTDGQIAANEA---------LKKDLEGVISGLQEYLGTIKG 478
Cdd:pfam01576 10 KEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAeemrarlaaRKQELEEILHELESRLEEEEE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 479 QATQAQNECRKLQ----------DEKETLLQRL------TEVQQEKEELELIAMDAEN---------MRKELAELESALQ 533
Cdd:pfam01576 90 RSQQLQNEKKKMQqhiqdleeqlDEEEAARQKLqlekvtTEAKIKKLEEDILLLEDQNsklskerklLEERISEFTSNLA 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 534 EQHEVNASLQQAQGDLSAYETELETQLKlkdaETSQLKQELEKLLRRTQLEQSVLQ---TELEKERESLRDALGKaqsse 610
Cdd:pfam01576 170 EEEEKAKSLSKLKNKHEAMISDLEERLK----KEEKGRQELEKAKRKLEGESTDLQeqiAELQAQIAELRAQLAK----- 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 611 eKQQENNELRTQLKQLQDDNSLLKKQLKEFQNHLNHVVDGLIHPEEVAARVDELRKRlklgagemrihspsdvLGKSLAD 690
Cdd:pfam01576 241 -KEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRD----------------LGEELEA 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 691 LQKQFSEILARSQWEKEEAQVRERKLHE-EMALQQEKlangqeefrqaceRALEARIKFDKRQHNARIQQLENEIHYLQE 769
Cdd:pfam01576 304 LKTELEDTLDTTAAQQELRSKREQEVTElKKALEEET-------------RSHEAQLQEMRQKHTQALEELTEQLEQAKR 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 770 NLKSMEKIQGLTDLQLQEADEEKERILAQLQELEKKKKREDARSQEQFLGLDEELKSLKKAVAASDKLaAAELTIAKDQL 849
Cdd:pfam01576 371 NKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKL-QSELESVSSLL 449
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 850 KSLHGTVVRINQERAE---ELQEAERFSREAMQAAKDLSRAEAEIELLQHLLREREGQFRDEMENADLGAKGANSQLLEI 926
Cdd:pfam01576 450 NEAEGKNIKLSKDVSSlesQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDM 529
|
....*...
gi 1720399285 927 EALNEAMA 934
Cdd:pfam01576 530 KKKLEEDA 537
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
438-534 |
8.80e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.22 E-value: 8.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 438 EEIKDLEQQLTDGQIAAnEALKKDLEgviSGLQEYLGTIKGQATQAQNECRKLQDEKETLLQRLTEVQQEKEELELIAMD 517
Cdd:COG0542 411 EELDELERRLEQLEIEK-EALKKEQD---EASFERLAELRDELAELEEELEALKARWEAEKELIEEIQELKEELEQRYGK 486
|
90
....*....|....*..
gi 1720399285 518 AENMRKELAELESALQE 534
Cdd:COG0542 487 IPELEKELAELEEELAE 503
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
566-965 |
9.28e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 41.26 E-value: 9.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 566 ETSQLKQELEKLLRRTQLEqsvLQTELEkERESLRDALGKAQSSEEKQQEN--NELRTQLKQLQDDNSLLKKQLKEFQNH 643
Cdd:pfam15921 96 ESNELHEKQKFYLRQSVID---LQTKLQ-EMQMERDAMADIRRRESQSQEDlrNQLQNTVHELEAAKCLKEDMLEDSNTQ 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 644 LNHVVDGLIHPEEVAARVDELRKRLKLGAGEmRIHSPSDVLGKSLADLQKQFSEILarsqwekeeaqvreRKLHEEMALQ 723
Cdd:pfam15921 172 IEQLRKMMLSHEGVLQEIRSILVDFEEASGK-KIYEHDSMSTMHFRSLGSAISKIL--------------RELDTEISYL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 724 QEKLANGQEEFrQACERALEARIKFDKRQHNARIQQLENEiHYLQenlksmekIQGLTDlQLQEADEEKERILAQLQELE 803
Cdd:pfam15921 237 KGRIFPVEDQL-EALKSESQNKIELLLQQHQDRIEQLISE-HEVE--------ITGLTE-KASSARSQANSIQSQLEIIQ 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 804 KKKKREDARSQEQFLGLDEELKSLKKAVAASDKLAaaeltiaKDQLKSLHGTVVRINQERAEELQEAERFSREA------ 877
Cdd:pfam15921 306 EQARNQNSMYMRQLSDLESTVSQLRSELREAKRMY-------EDKIEELEKQLVLANSELTEARTERDQFSQESgnlddq 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 878 -MQAAKDLSRAEAEIELlqhllrEREGQFRdeMENADLGakgaNSqlLEIEALNEAMAKQRAEITRLRDVLNLTGAGTKG 956
Cdd:pfam15921 379 lQKLLADLHKREKELSL------EKEQNKR--LWDRDTG----NS--ITIDHLRRELDDRNMEVQRLEALLKAMKSECQG 444
|
....*....
gi 1720399285 957 GIENVLEEI 965
Cdd:pfam15921 445 QMERQMAAI 453
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
1174-1877 |
9.71e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 40.96 E-value: 9.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1174 EVSRLEDIMQHLKSKQREERRQKASTQHSEEEVDgLHRDIDDLLQEKKELELEVEELHRTIERhqqrkdfidghvenlMT 1253
Cdd:pfam10174 51 EAARISVLKEQYRVTQEENQHLQLTIQALQDELR-AQRDLNQLLQQDFTTSPVDGEDKFSTPE---------------LT 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1254 ELEIEKSLKHHEDIVDEIECLEKTLlkRRSELR-EADRLLAEAENElactkektksAVEKFTDakrnLLQTESDAEALEK 1332
Cdd:pfam10174 115 EENFRRLQSEHERQAKELFLLRKTL--EEMELRiETQKQTLGARDE----------SIKKLLE----MLQSKGLPKKSGE 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1333 RAQETALNLVKAEQQLRLLQADAEDLEQHKIKQEEIL-------------KEINKVVAAKDADFQCLNEKKEKLTEELQS 1399
Cdd:pfam10174 179 EDWERTRRIAEAEMQLGHLEVLLDQKEKENIHLREELhrrnqlqpdpaktKALQTVIEMKDTKISSLERNIRDLEDEVQM 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1400 LQRDikAAQHSEDHHL-----------------------QVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHR 1456
Cdd:pfam10174 259 LKTN--GLLHTEDREEeikqmevykshskfmknkidqlkQELSKKESELLALQTKLETLTNQNSDCKQHIEVLKESLTAK 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1457 REELLLLQDSLAQAKADLQealtlgetevaEKCSHIREVKSLLEELSFQKGELNVHISEKKTQLALIQQE---MEKEEKN 1533
Cdd:pfam10174 337 EQRAAILQTEVDALRLRLE-----------EKESFLNKKTKQLQDLTEEKSTLAGEIRDLKDMLDVKERKinvLQKKIEN 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1534 LQVVLQQLSRHKTELKNVADILQLETSelqglklQHDQKVVELEKAQVDvleekleLENLQQATQQQRRELERQRqller 1613
Cdd:pfam10174 406 LQEQLRDKDKQLAGLKERVKSLQTDSS-------NTDTALTTLEEALSE-------KERIIERLKEQREREDRER----- 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1614 dRRETERVRAESQALQSCVECLSKEK-EDLQGQCESWEKKSSHAQRVLAateesnkmEQSNLGKLELSVRKLRQELEQLS 1692
Cdd:pfam10174 467 -LEELESLKKENKDLKEKVSALQPELtEKESSLIDLKEHASSLASSGLK--------KDSKLKSLEIAVEQKKEECSKLE 537
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1693 QDKLALHsEVAEVQQQLQGKQEAINSLQEELDSTQDHLDLAKQDLIHTTKCQNELLNEQTQLQEDISKWMARLESCQKET 1772
Cdd:pfam10174 538 NQLKKAH-NAEEAVRTNPEINDRIRLLEQEVARYKEESGKAQAEVERLLGILREVENEKNDKDKKIAELESLTLRQMKEQ 616
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720399285 1773 ETKEQQVQQLQDEIRESKLRLDQQEMmfqklqkeREREEQKFEAGKVTLEQQQRQLEK---ELTDQKSRLKQLLTDVSAA 1849
Cdd:pfam10174 617 NKKVANIKHGQQEMKKKGAQLLEEAR--------RREDNLADNSQQLQLEELMGALEKtrqELDATKARLSSTQQSLAEK 688
|
730 740
....*....|....*....|....*...
gi 1720399285 1850 EGRLGTLQEEERRieGLERMLSQAKQQL 1877
Cdd:pfam10174 689 DGHLTNLRAERRK--QLEEILEMKQEAL 714
|
|
| |
