|
Name |
Accession |
Description |
Interval |
E-value |
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
213-277 |
1.64e-34 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 126.75 E-value: 1.64e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720414365 213 VGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKV 277
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
60-124 |
8.09e-31 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 116.35 E-value: 8.09e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720414365 60 VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRPSKL 124
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
213-278 |
5.03e-28 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 108.44 E-value: 5.03e-28
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414365 213 VGDRVLVGGT-KAGVVRFLGETDFAKGEWCGVELDEPL-GKNDGAVAGTRYFQCQPKYGLFAPVHKVT 278
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPLrGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
60-125 |
3.42e-27 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 106.13 E-value: 3.42e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414365 60 VGERVWVNGN-KPGFIQFLGETQFAPGQWAGIVLDEP-IGKNDGSVAGVRYFQCEPLKGIFTRPSKLT 125
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPlRGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
945-1842 |
2.07e-23 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 108.99 E-value: 2.07e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 945 QDLKAKYEKAS--SETKTKHEEILQNLqkmlADTEDKLKAAQEANRDLMQDMEELKTQADKAKSLTYL--------LTSA 1014
Cdd:TIGR02168 155 EERRAIFEEAAgiSKYKERRKETERKL----ERTRENLDRLEDILNELERQLKSLERQAEKAERYKELkaelreleLALL 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1015 KKEIEVMSEELRGLKSEKQLYAQEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSVNETLHLEKERVSEEKQVAEKR 1094
Cdd:TIGR02168 231 VLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRER 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1095 YQQEHRDRESLVAEREKLLKEINAAQEELlkmhmendsleaskVSMQVLIEELRFCKDKLMAMSEKARAEKEHLEGQvkk 1174
Cdd:TIGR02168 311 LANLERQLEELEAQLEELESKLDELAEEL--------------AELEEKLEELKEELESLEAELEELEAELEELESR--- 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1175 ltaenlvlVKDKDDVIQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENllQTNRDLQFEKD 1254
Cdd:TIGR02168 374 --------LEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEE--AELKELQAELE 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1255 TLRQGQEKLSASLEAtlqvkqlLSTEAETLRTQLDCASKALRKAELDMRQLQTSNSSLTKLLEeiktcraitdseciqll 1334
Cdd:TIGR02168 444 ELEEELEELQEELER-------LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQE----------------- 499
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1335 hEKESLAASERTLLAEKEELLSENRIITEKLSKQSEEVARLEMGLNEKITYLTSE------KEVACQKVAKLKKQQDSLL 1408
Cdd:TIGR02168 500 -NLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVEnlnaakKAIAFLKQNELGRVTFLPL 578
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1409 KEKSALELQ-NGDLLADRESSIKTIGDLRRKYDQEAtnrRIVMQEkmkLLGNI---DALKKELQERKKENQELTSSKCDL 1484
Cdd:TIGR02168 579 DSIKGTEIQgNDREILKNIEGFLGVAKDLVKFDPKL---RKALSY---LLGGVlvvDDLDNALELAKKLRPGYRIVTLDG 652
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1485 SLLLKEAQDAKKNLEKEHTsmIQAKDNlnaELKTCCCEKNMLLRDGLNLQEECQKLNEEIREIQQtlilEKEARAKESET 1564
Cdd:TIGR02168 653 DLVRPGGVITGGSAKTNSS--ILERRR---EIEELEEKIEELEEKIAELEKALAELRKELEELEE----ELEQLRKELEE 723
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1565 SLYENNKLHGRVVLLEEEIQRLRVCSEQLQTENFTLTQEKTNSEQKVEEIIKEKELLSAETAQLAANIETLKSDFAALSK 1644
Cdd:TIGR02168 724 LSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALRE 803
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1645 SKLELQELHSCLTKILDDLRLNHEVALTERAEV---LQDNKNLLAEKREMMLRNEEALKE----KEKLEESYFILQKEIS 1717
Cdd:TIGR02168 804 ALDELRAELTLLNEEAANLRERLESLERRIAATerrLEDLEEQIEELSEDIESLAAEIEEleelIEELESELEALLNERA 883
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1718 QLAQTNSHISANLLESQSENRTLRKDKSKLTLKIRELETLHSFTAAQTAEDAMQIME---------QMTKEKTETLASLE 1788
Cdd:TIGR02168 884 SLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNlqerlseeySLTLEEAEALENKI 963
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*....
gi 1720414365 1789 DTKQTNAR-----LQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQA 1842
Cdd:TIGR02168 964 EDDEEEARrrlkrLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEA 1022
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
557-1355 |
7.53e-21 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 100.53 E-value: 7.53e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 557 QQAMEELKVsFSKGIGTDSAEFAELKTQIERLRLDYQHEIES---LQSKQDSERSAHAKEMETMQAKLMKIIKEKeDSLE 633
Cdd:TIGR02169 173 EKALEELEE-VEENIERLDLIIDEKRQQLERLRREREKAERYqalLKEKREYEGYELLKEKEALERQKEAIERQL-ASLE 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 634 AVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKELevlqakyTEQSEVignftsqlsAVKEKLLDLDALRkANSEGKLELe 713
Cdd:TIGR02169 251 EELEKLTEEISELEKRLEEIEQLLEELNKKIKDL-------GEEEQL---------RVKEKIGELEAEI-ASLERSIAE- 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 714 tLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQ 793
Cdd:TIGR02169 313 -KERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYR 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 794 TRMQDTVNKLH-------QKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQL 866
Cdd:TIGR02169 392 EKLEKLKREINelkreldRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQEL 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 867 TKMNDELRLKERSVEELQLKLTKANENAS--------------FLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLE 932
Cdd:TIGR02169 472 YDLKEEYDRVEKELSKLQRELAEAEAQARaseervrggraveeVLKASIQGVHGTVAQLGSVGERYATAIEVAAGNRLNN 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 933 LEKKMETSYNQCQDLkAKYEKASSET-----KTKHEEILQNLQKM---------LADTEDKLKAA-QEANRD--LMQDME 995
Cdd:TIGR02169 552 VVVEDDAVAKEAIEL-LKRRKAGRATflplnKMRDERRDLSILSEdgvigfavdLVEFDPKYEPAfKYVFGDtlVVEDIE 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 996 ELKTQ-----------------------ADKAKSLTYLLTSAKKEIEVMSEELRGLKSEKQLYAQEANALKLEKGSLLSK 1052
Cdd:TIGR02169 631 AARRLmgkyrmvtlegelfeksgamtggSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQE 710
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1053 LIEVETKITLLQEDQQKLwsvnetlhLEKERVSEEKQVAEKRYQQE-HRDRESLVAEREKLLKEINAAQEELLKMHMEND 1131
Cdd:TIGR02169 711 LSDASRKIGEIEKEIEQL--------EQEEEKLKERLEELEEDLSSlEQEIENVKSELKELEARIEELEEDLHKLEEALN 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1132 SLEASKVSMQvlIEELRFCKDKLMAMSEKARAEKEHLEGQVKKLTAENLVLvkdkDDVIQKLQSAYEELVKDQKALVQEI 1211
Cdd:TIGR02169 783 DLEARLSHSR--IPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYL----EKEIQELQEQRIDLKEQIKSIEKEI 856
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1212 EDLTTEKKSAAEKQMSLDNTCLTLKAERENLLQTNRDLQFEKDTLRQGQEKLSASLEATLQVKQLLSTEAETLRTQLdca 1291
Cdd:TIGR02169 857 ENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEEL--- 933
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720414365 1292 sKALRKAELDMRQLQTSNSSLTKLLEEIKTC-RAITDSECIQLLHEKE---------SLAASERTLLAEKEELL 1355
Cdd:TIGR02169 934 -SEIEDPKGEDEEIPEEELSLEDVQAELQRVeEEIRALEPVNMLAIQEyeevlkrldELKEKRAKLEEERKAIL 1006
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
647-1410 |
5.78e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 97.82 E-value: 5.78e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 647 LVEMEDTLNKLQEAeikVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKanSEGKLELETLRQQLEGAEKQI 726
Cdd:TIGR02168 181 LERTRENLDRLEDI---LNELERQLKSLERQAEKAERYKELKAELRELELALLVLRL--EELREELEELQEELKEAEEEL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 727 KNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQK 806
Cdd:TIGR02168 256 EELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDEL 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 807 EEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLK 886
Cdd:TIGR02168 336 AEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 887 LTKANENASFLQKSIGEVTLKAEQSQ----QQAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSEtKTKH 962
Cdd:TIGR02168 416 RERLQQEIEELLKKLEEAELKELQAEleelEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQAR-LDSL 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 963 EEILQNLQ------KMLADTEDKLKAAQEANRDLMQDMEELKTQADKA--KSLTYLLT----SAKKEIEVMSEELRG--- 1027
Cdd:TIGR02168 495 ERLQENLEgfsegvKALLKNQSGLSGILGVLSELISVDEGYEAAIEAAlgGRLQAVVVenlnAAKKAIAFLKQNELGrvt 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1028 -----LKSEKQLYAQEANALKLEKG--SLLSKLIEVETKITLLQED-------QQKLWSVNETLHLEKER---VSEEKQV 1090
Cdd:TIGR02168 575 flpldSIKGTEIQGNDREILKNIEGflGVAKDLVKFDPKLRKALSYllggvlvVDDLDNALELAKKLRPGyriVTLDGDL 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1091 AEKRY--QQEHRDRESLV----AEREKLLKEINAAQEELLKMHMENDSLEASKVSMQVLIEELRFCKDKLMAMSEKARAE 1164
Cdd:TIGR02168 655 VRPGGviTGGSAKTNSSIlerrREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKD 734
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1165 KEHLEGQVKKLTAEnlvlvkdkddvIQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENLLQ 1244
Cdd:TIGR02168 735 LARLEAEVEQLEER-----------IAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALRE 803
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1245 TNRDLQFEKDTLRQGQEKLSASLEATLQVKQLLSTEAETLRTQLDCASKALRKAELDMRQLQTSNSSLTKLLEEIKTCRA 1324
Cdd:TIGR02168 804 ALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERA 883
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1325 ITDSECIQLLHEKESLAASERTLLAEKEELLSENRIITEKLSKQSEEVARLEMGLNEKITYLTSEKEVACQKVAKLKKQQ 1404
Cdd:TIGR02168 884 SLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKI 963
|
....*.
gi 1720414365 1405 DSLLKE 1410
Cdd:TIGR02168 964 EDDEEE 969
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
712-1500 |
7.65e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 90.89 E-value: 7.65e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 712 LETLRQQLEGAEKQIKNLETERNAESS----KANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSE 787
Cdd:TIGR02168 202 LKSLERQAEKAERYKELKAELRELELAllvlRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEE 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 788 EAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLT 867
Cdd:TIGR02168 282 EIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELE 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 868 KMNDELRLKERSVEELQLKLTKANENASFLQKSIgevtlKAEQSQQQAARKHEEEKKELEEKLLELEKKMEtsynqcQDL 947
Cdd:TIGR02168 362 ELEAELEELESRLEELEEQLETLRSKVAQLELQI-----ASLNNEIERLEARLERLEDRRERLQQEIEELL------KKL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 948 KAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKSLTYLLtsakkeiEVMSEELRG 1027
Cdd:TIGR02168 431 EEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSL-------ERLQENLEG 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1028 LKSEKQLYAQEANALKLEKGsLLSKLIEVETKI-----TLLQEDQQKLWSVNETL------HLEKERVSE---------- 1086
Cdd:TIGR02168 504 FSEGVKALLKNQSGLSGILG-VLSELISVDEGYeaaieAALGGRLQAVVVENLNAakkaiaFLKQNELGRvtflpldsik 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1087 --EKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEELL-KMHMENDSLEASKVSMQVLIEELRFCKD----------- 1152
Cdd:TIGR02168 583 gtEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLgGVLVVDDLDNALELAKKLRPGYRIVTLDgdlvrpggvit 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1153 -----KLMAMSEKaRAEKEHLEGQVKKLTAEnlvlVKDKDDVIQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMS 1227
Cdd:TIGR02168 663 ggsakTNSSILER-RREIEELEEKIEELEEK----IAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLAR 737
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1228 LDNTCLTLKAERENLLQTNRDLQFEKDTLRQGQEKLSASLEATLQVKQLLSTEAETLRTQLDCASKALRKAELDMRQLQT 1307
Cdd:TIGR02168 738 LEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNE 817
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1308 SNSSLTKLLEEIKTCRAITDSECIQLLHEKESLAASERTL---LAEKEELLSENRIITEKLSKQSEEVARLEMGLNEKIT 1384
Cdd:TIGR02168 818 EAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLaaeIEELEELIEELESELEALLNERASLEEALALLRSELE 897
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1385 YLTSEKEVACQKVAKLKKQQDSLLKEKSALELQNGDLLADRESSIKTIGDL--------------RRKYDQEATNRRIVM 1450
Cdd:TIGR02168 898 ELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEysltleeaealenkIEDDEEEARRRLKRL 977
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|..
gi 1720414365 1451 QEKMKLLG--NIDALkKELQERKKENQELTSSKCDLslllkeaQDAKKNLEK 1500
Cdd:TIGR02168 978 ENKIKELGpvNLAAI-EEYEELKERYDFLTAQKEDL-------TEAKETLEE 1021
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
333-1122 |
2.06e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.80 E-value: 2.06e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 333 GLHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARTKELEQSLLFEKTK 412
Cdd:TIGR02168 231 VLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRER 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 413 ADKLQRELEDTRVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKppGDVDMSLSLLQEISALQEKLEAIHTDHQGEM 492
Cdd:TIGR02168 311 LANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLE--AELEELEAELEELESRLEELEEQLETLRSKV 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 493 TSLKEHFG---AREEAFQKEIKALHTATEKLSKENESLRSKLDHANKEnsdvialwksKLETAIASHQQAMEELKVSFSK 569
Cdd:TIGR02168 389 AQLELQIAslnNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELK----------ELQAELEELEEELEELQEELER 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 570 GIgTDSAEFAELKTQIERLRLDYQHEIESLQSKQDSERS----------------AHAKEMETMQAKLMKIIKEKEDSLE 633
Cdd:TIGR02168 459 LE-EALEELREELEEAEQALDAAERELAQLQARLDSLERlqenlegfsegvkallKNQSGLSGILGVLSELISVDEGYEA 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 634 AVKARLDSAEDQHLVEMEDT--------------------LNKLQEAEIKVKELEVLQA------------KYTEQSEVI 681
Cdd:TIGR02168 538 AIEAALGGRLQAVVVENLNAakkaiaflkqnelgrvtflpLDSIKGTEIQGNDREILKNiegflgvakdlvKFDPKLRKA 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 682 GNFTSQLSAVKEKLLDLDALRKANSEG----KLELETLR-------------QQLEGAEKQIKNLETERNAESSKANSIT 744
Cdd:TIGR02168 618 LSYLLGGVLVVDDLDNALELAKKLRPGyrivTLDGDLVRpggvitggsaktnSSILERRREIEELEEKIEELEEKIAELE 697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 745 KELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENL 824
Cdd:TIGR02168 698 KALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEEL 777
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 825 TDMEAKfkekddredqlvkaKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEV 904
Cdd:TIGR02168 778 AEAEAE--------------IEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDL 843
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 905 TLKAEQSQQQAARkheeekkeleeklleLEKKMETSYNQCQDLKAKYEKASSEtKTKHEEILQNLQKMLADTEDKLKAAQ 984
Cdd:TIGR02168 844 EEQIEELSEDIES---------------LAAEIEELEELIEELESELEALLNE-RASLEEALALLRSELEELSEELRELE 907
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 985 EANRDLMQDMEELKTQADKAKsltylltSAKKEIEVMSEELRG-LKSEKQLYAQEANALKLEKGSLLSKLievETKITLL 1063
Cdd:TIGR02168 908 SKRSELRRELEELREKLAQLE-------LRLEGLEVRIDNLQErLSEEYSLTLEEAEALENKIEDDEEEA---RRRLKRL 977
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*....
gi 1720414365 1064 QEDQQKLWSVNETlhlekerVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEE 1122
Cdd:TIGR02168 978 ENKIKELGPVNLA-------AIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDRE 1029
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
575-1245 |
2.22e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.80 E-value: 2.22e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 575 SAEFAELKTQIERLRLdYQHEIESLQSKQDSERSAHAKEMETMQAKLMkIIKEKEDSLEAVKARLDSAEDQHLVEMEDTL 654
Cdd:TIGR02168 259 TAELQELEEKLEELRL-EVSELEEEIEELQKELYALANEISRLEQQKQ-ILRERLANLERQLEELEAQLEELESKLDELA 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 655 NKLQEAEikvKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDA----LRKANSEGKLELETLRQQLEGAEKQIKNLE 730
Cdd:TIGR02168 337 EELAELE---EKLEELKEELESLEAELEELEAELEELESRLEELEEqletLRSKVAQLELQIASLNNEIERLEARLERLE 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 731 TERNAESSKANSITKELQEKELVLtgLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQF 810
Cdd:TIGR02168 414 DRRERLQQEIEELLKKLEEAELKE--LQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARL 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 811 NVLSSELEKLRENLTDMEAKFKEKDDRED------QLVKAKEK----LENDIAEIMKMSGDNSSQLTKMNDELRLKERSV 880
Cdd:TIGR02168 492 DSLERLQENLEGFSEGVKALLKNQSGLSGilgvlsELISVDEGyeaaIEAALGGRLQAVVVENLNAAKKAIAFLKQNELG 571
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 881 EELQLKLTKANENAsfLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLE-LEKKMETSYNQCQDLKAKY-------- 951
Cdd:TIGR02168 572 RVTFLPLDSIKGTE--IQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLlGGVLVVDDLDNALELAKKLrpgyrivt 649
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 952 -----------------EKASSETKTKHE-EILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAK-------- 1005
Cdd:TIGR02168 650 ldgdlvrpggvitggsaKTNSSILERRREiEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELeelsrqis 729
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1006 SLTYLLTSAKKEIEVMSEELRGLKSEKQLYAQEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSVNETLHLEKERVS 1085
Cdd:TIGR02168 730 ALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELR 809
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1086 EEKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEELLKMHMENDSLEASKVSMQVLIEELrfckdklmamsekaRAEK 1165
Cdd:TIGR02168 810 AELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEEL--------------ESEL 875
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1166 EHLEGQVKKLTAEnlvlvkdkddvIQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENLLQT 1245
Cdd:TIGR02168 876 EALLNERASLEEA-----------LALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQER 944
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
632-1214 |
1.18e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 80.37 E-value: 1.18e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 632 LEAVKARLDSAEDqHLVEMEDTLNKLQ-EAEIKVK------ELEVLQAKYteqsevignftsQLSAVKEKLLDLDALRKA 704
Cdd:COG1196 181 LEATEENLERLED-ILGELERQLEPLErQAEKAERyrelkeELKELEAEL------------LLLKLRELEAELEELEAE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 705 NSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANS-------ITKELQEKELVLTGLQDSLNQVNQVKETLEKELQT 777
Cdd:COG1196 248 LEELEAELEELEAELAELEAELEELRLELEELELELEEaqaeeyeLLAELARLEQDIARLEERRRELEERLEELEEELAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 778 LKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMK 857
Cdd:COG1196 328 LEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 858 MSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQ--SQQQAARKHEEEKKELEEKLLELEK 935
Cdd:COG1196 408 AEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAllELLAELLEEAALLEAALAELLEELA 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 936 KMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQ----KMLADTEDKLKAAQEA------NRDLMQDMEELKTQADKAK 1005
Cdd:COG1196 488 EAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLagavAVLIGVEAAYEAALEAalaaalQNIVVEDDEVAAAAIEYLK 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1006 SLT------YLLTSAKKEIEVMSEELRGLKSEKQLYAQEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSVNETLHL 1079
Cdd:COG1196 568 AAKagratfLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLR 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1080 EKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEELLKMHMENDSLEASKVSMQVLIEELRfckDKLMAMSE 1159
Cdd:COG1196 648 EVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEER---LEEELEEE 724
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 1720414365 1160 KARAEKEHLEGQVKKLTAENLVLVKDKDDVIQKLQSAYEELVKDQKALVQEIEDL 1214
Cdd:COG1196 725 ALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
975-1586 |
5.70e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 78.05 E-value: 5.70e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 975 DTEDKLKAAQEaN----RDLMQD----MEELKTQADKAKS-LTYLLTSAKKEIEVMSEELRGLKSEKQLYAQEANALKLE 1045
Cdd:COG1196 176 EAERKLEATEE-NlerlEDILGElerqLEPLERQAEKAERyRELKEELKELEAELLLLKLRELEAELEELEAELEELEAE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1046 KGSLLSKLIEVETKITLLQEDQQKLwsvnetlHLEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEELLK 1125
Cdd:COG1196 255 LEELEAELAELEAELEELRLELEEL-------ELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1126 MHMENDSLEASKVSMQVLIEELrfckDKLMAMSEKARAEKEHLEGQVKKLTAENLVLVKDKDDVIQKLQSAYEELVKDQK 1205
Cdd:COG1196 328 LEEELEELEEELEELEEELEEA----EEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1206 ALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENLLQTNRDLQFEKDTLRQGQEKLSASLEATLQVKQLLSTEAETLR 1285
Cdd:COG1196 404 ELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELL 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1286 TQLDcASKALRKAELDMRQLQTSNSSLTKLLEEIKTCRAITDSECIQLLHEKESLAASERTLLAEKEELLSENRIITEK- 1364
Cdd:COG1196 484 EELA-EAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAa 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1365 --LSKQSEEVARLEMGLNEKITYLTSEKEVACQKVAKLKKQQDSLLKEKSALELQNGDLLADResSIKTIGDLRRKYDQE 1442
Cdd:COG1196 563 ieYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGR--TLVAARLEAALRRAV 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1443 ATNRRIVMQEKMKLLGNIDALKKELQERKKENQELTSSKCDLSLLLKEAQDAKKNLEKEHTSMIQAKDNLNAELktcccE 1522
Cdd:COG1196 641 TLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEE-----E 715
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720414365 1523 KNMLLRDGLNLQEECQKLNEEIREIQQTLILEKEARAKESETSLYENNKLHGRVVLLEEEIQRL 1586
Cdd:COG1196 716 RLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1211-1842 |
2.36e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 75.74 E-value: 2.36e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1211 IEDLTTEKksaaEKQMSldntclTLKAERENLLQtNRDLQFEKDTLRQgqEKLSASLEATLQVKQLLSTEAETLRTQLDC 1290
Cdd:COG1196 191 LEDILGEL----ERQLE------PLERQAEKAER-YRELKEELKELEA--ELLLLKLRELEAELEELEAELEELEAELEE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1291 ASKALRKAELDMRQLQTSNSSLTKLLEEIKTCRAITDSECIQLLHEKESLAASERTLLAEKEELLSENRIITEKLSKQSE 1370
Cdd:COG1196 258 LEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1371 EVARLEmglnekityltSEKEVACQKVAKLKKQQDSLLKEKSALELQNGDLLADRESSIKTIGDLRRKYDQEATNRRIVM 1450
Cdd:COG1196 338 ELEELE-----------EELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELE 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1451 QEKMKLLGNIDALKKELQERKKENQELTSSKCDLSLLLKEAQDAKKNLEKEHTSMIQAKDNLNAELKTccceknmllrdg 1530
Cdd:COG1196 407 EAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL------------ 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1531 lnLQEECQKLNEEIREIQQTLILEKEARAKESETSlyennKLHGRVVLLEEEIQRLRVCSEQLQTENFTLTQEKTNSEQK 1610
Cdd:COG1196 475 --LEAALAELLEELAEAAARLLLLLEAEADYEGFL-----EGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAA 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1611 VEEIIKEKELLSAETAQLAANIETLKSDFAALSKSKLELQELHSCLTKILDDLRLNHEVALTERAEVLQDNKNLLAEKRE 1690
Cdd:COG1196 548 LQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTL 627
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1691 MMLRNEEALKEKEKLEESYFILQKEISQLAQTNSHISANLLESQSENRTLRKDKSKLTLKIRELETLHSFTAAQTAEDAM 1770
Cdd:COG1196 628 VAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEER 707
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720414365 1771 QIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELnkskELLSVENQKMEEFKKEIETLKQA 1842
Cdd:COG1196 708 ELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEA----LEELPEPPDLEELERELERLERE 775
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
436-1230 |
3.35e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 75.48 E-value: 3.35e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 436 ELEKDL------ALRAQEVAELRRRLEsskppgDVDMSLSLLqEISALQEKLEAIhtdhQGEMTSLKEhfgaREEAFQKE 509
Cdd:TIGR02168 197 ELERQLkslerqAEKAERYKELKAELR------ELELALLVL-RLEELREELEEL----QEELKEAEE----ELEELTAE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 510 IKALHTATEKLSKENESLRSKLDHANKENSDVIALwKSKLETAIASHQQAMEELKVSFSKGigtdSAEFAELKTQIERLR 589
Cdd:TIGR02168 262 LQELEEKLEELRLEVSELEEEIEELQKELYALANE-ISRLEQQKQILRERLANLERQLEEL----EAQLEELESKLDELA 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 590 LDY---QHEIESLQSKQDSERSAHAKEMETMQAkLMKIIKEKEDSLEAVKARLDSAEDQhlveMEDTLNKLQEAEIKVKE 666
Cdd:TIGR02168 337 EELaelEEKLEELKEELESLEAELEELEAELEE-LESRLEELEEQLETLRSKVAQLELQ----IASLNNEIERLEARLER 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 667 LEVLQAKYTEQSEVIGNfTSQLSAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKE 746
Cdd:TIGR02168 412 LEDRRERLQQEIEELLK-KLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQAR 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 747 ---LQEKELVLTGLQDSLNQVNQVKETLEKELQTLKE--KFASTSEEAVSA--QTRMQD-TVNKLHQKEEQFNVLSSELE 818
Cdd:TIGR02168 491 ldsLERLQENLEGFSEGVKALLKNQSGLSGILGVLSEliSVDEGYEAAIEAalGGRLQAvVVENLNAAKKAIAFLKQNEL 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 819 --------------KLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMkmsgDNSSQLTKMNDELRLkersveelq 884
Cdd:TIGR02168 571 grvtflpldsikgtEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLL----GGVLVVDDLDNALEL--------- 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 885 LKLTKANENASFLQK---SIGEVTLKAEQSQQQAARKHEEEKKELEEKllelekkMETSYNQCQDLKAKYEKAssetKTK 961
Cdd:TIGR02168 638 AKKLRPGYRIVTLDGdlvRPGGVITGGSAKTNSSILERRREIEELEEK-------IEELEEKIAELEKALAEL----RKE 706
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 962 HEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKSLTYLLTSAKKEIEVMSEELRGL-------KSEKQL 1034
Cdd:TIGR02168 707 LEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAeeelaeaEAEIEE 786
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1035 YAQEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSVNETLHLEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLK 1114
Cdd:TIGR02168 787 LEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEE 866
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1115 EINAAQEELlkmhmenDSLEASKVSMQVLIEELRFCKDKLMA----MSEKARAEKEHLEGQVKKLTAENLVLVKDKDDVI 1190
Cdd:TIGR02168 867 LIEELESEL-------EALLNERASLEEALALLRSELEELSEelreLESKRSELRRELEELREKLAQLELRLEGLEVRID 939
|
810 820 830 840
....*....|....*....|....*....|....*....|
gi 1720414365 1191 QKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDN 1230
Cdd:TIGR02168 940 NLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLEN 979
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
582-1287 |
3.52e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 75.54 E-value: 3.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 582 KTQIERLRLDYQHEIESLQSKQDSERSAHAKE-------METMQAKLMKIIKEKeDSLEAVKARLDSAEDQHLVEMEDTL 654
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELHEKQkfylrqsVIDLQTKLQEMQMER-DAMADIRRRESQSQEDLRNQLQNTV 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 655 NKLQEAE-IKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDAL--RKANSEGKLELETLRQQLEGAEKQIKNLET 731
Cdd:pfam15921 152 HELEAAKcLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEAsgKKIYEHDSMSTMHFRSLGSAISKILRELDT 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 732 ERNAESSKANSITKELQ--------EKELVLTGLQDslnQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRM----QDT 799
Cdd:pfam15921 232 EISYLKGRIFPVEDQLEalksesqnKIELLLQQHQD---RIEQLISEHEVEITGLTEKASSARSQANSIQSQLeiiqEQA 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 800 VNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEK-DDREDQLVKAKEKLENDIAE---IMKMSGDNSSQLTKMNDEL-- 873
Cdd:pfam15921 309 RNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKiEELEKQLVLANSELTEARTErdqFSQESGNLDDQLQKLLADLhk 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 874 RLKERSVEELQLKLTKANENASFLqkSIGEVTLKAEQSQQQAARkheeekkeleeklleLEKKMETSYNQCQDlKAKYEK 953
Cdd:pfam15921 389 REKELSLEKEQNKRLWDRDTGNSI--TIDHLRRELDDRNMEVQR---------------LEALLKAMKSECQG-QMERQM 450
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 954 ASSETKTKHEEILQNLQKMLADTEDKLKAAQEanrDLMQDMEELKTQADKAKSLTYLLTSAKKEIEVMSEELRGLKSEKQ 1033
Cdd:pfam15921 451 AAIQGKNESLEKVSSLTAQLESTKEMLRKVVE---ELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVD 527
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1034 LYAQEANALKLEKGSLLSKLIEVET-KITLLQEDQqklwsVNETLHLEKERVSEekqvaekRYQQEHRDRESLVAEREKL 1112
Cdd:pfam15921 528 LKLQELQHLKNEGDHLRNVQTECEAlKLQMAEKDK-----VIEILRQQIENMTQ-------LVGQHGRTAGAMQVEKAQL 595
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1113 LKEINAAQEELLKMHMENDSLEASKVSMQVLIEELRFCKDKLM-AMSEKARAEKEhlegqVKKLTAENLVLVKDKDDVIQ 1191
Cdd:pfam15921 596 EKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVnAGSERLRAVKD-----IKQERDQLLNEVKTSRNELN 670
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1192 KLQSAYEELVKDQKALVQEIEDLTTE-KKSAAEKQMSLDNTCLTLK---------------------AERENLLQTNRDL 1249
Cdd:pfam15921 671 SLSEDYEVLKRNFRNKSEEMETTTNKlKMQLKSAQSELEQTRNTLKsmegsdghamkvamgmqkqitAKRGQIDALQSKI 750
|
730 740 750 760
....*....|....*....|....*....|....*....|....*...
gi 1720414365 1250 QF----------EKDTLRQGQEKLSASLEATLQVKQLLSTEAETLRTQ 1287
Cdd:pfam15921 751 QFleeamtnankEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQ 798
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1459-2044 |
1.06e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 73.56 E-value: 1.06e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1459 NIDALKKELQERKKENQELTSSKCDLslllkeaQDAKKNLEKEHTSMIQAKDNLNAELKTCCCEKNMLLRdglnLQEECQ 1538
Cdd:PRK03918 166 NLGEVIKEIKRRIERLEKFIKRTENI-------EELIKEKEKELEEVLREINEISSELPELREELEKLEK----EVKELE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1539 KLNEEIREIQ-QTLILEKEARAKESETSLYEN--NKLHGRVVLLEEEIQRLRVCsEQLQTENFTLTQEKTNSEQKVEEII 1615
Cdd:PRK03918 235 ELKEEIEELEkELESLEGSKRKLEEKIRELEEriEELKKEIEELEEKVKELKEL-KEKAEEYIKLSEFYEEYLDELREIE 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1616 KEKELLSAETAQLAANIETLKSDFAALSKSKLELQELHSCLTKILDDLRLNHEV-ALTERAEVLQDN-KNLLAEKREMML 1693
Cdd:PRK03918 314 KRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAkAKKEELERLKKRlTGLTPEKLEKEL 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1694 rnEEALKEKEKLEESYFILQKEISQLAQTNSHISANLLEsqsenrtLRKDKSKLTLKIRELETLH--SFTAAQTAEdamq 1771
Cdd:PRK03918 394 --EELEKAKEEIEEEISKITARIGELKKEIKELKKAIEE-------LKKAKGKCPVCGRELTEEHrkELLEEYTAE---- 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1772 iMEQMTKEKTETLASLEDTKQTNARLQNELDTLKE--NNLKTVEELNKSKELLSVEN-QKMEEFKKEIETLKQAAAQKSQ 1848
Cdd:PRK03918 461 -LKRIEKELKEIEEKERKLRKELRELEKVLKKESEliKLKELAEQLKELEEKLKKYNlEELEKKAEEYEKLKEKLIKLKG 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1849 QLSALQEENVKLAEELGRTRDEVTSHQKLEEERSVLNNQLLEMK-KSLPSNTLRESEFR---------KDADEEKASLQK 1918
Cdd:PRK03918 540 EIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKELEpfyneylelKDAEKELEREEK 619
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1919 SISLTSALLTEKDAELEKLRNEVTVLRGENATAKSLHSV--VQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDAQ 1996
Cdd:PRK03918 620 ELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEeeYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKL 699
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 1720414365 1997 AEEDERAQESQQMIDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGE 2044
Cdd:PRK03918 700 KEELEEREKAKKELEKLEKALERVEELREKVKKYKALLKERALSKVGE 747
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1254-2027 |
2.02e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.79 E-value: 2.02e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1254 DTLRQGQEKLSASLEATLQVKQLLSTEAETLRTQLdcaSKALRKAELDMRQLQTSNSSLTKLLEEIKTCRAITDSECIQL 1333
Cdd:TIGR02169 194 DEKRQQLERLRREREKAERYQALLKEKREYEGYEL---LKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEI 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1334 LHEKESLAASERTLLAEkeellsENRIITEKLSKQSEEVARLEMGLNEKitylTSEKEVACQKVAKLKKQQDSLLKEKSA 1413
Cdd:TIGR02169 271 EQLLEELNKKIKDLGEE------EQLRVKEKIGELEAEIASLERSIAEK----ERELEDAEERLAKLEAEIDKLLAEIEE 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1414 LELQNGDLLADRESSIKTIGDLRRKYD-------QEATNRRIVMQEKMKLLGNIDALKKELQERKKENQELTSSKCDLSL 1486
Cdd:TIGR02169 341 LEREIEEERKRRDKLTEEYAELKEELEdlraeleEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1487 LLKEAQDAKKNLEKEHTSMIQAKDNLNAELKTCCCEKNMLLRDG-------LNLQEECQKLNEEIREIQQTLIlEKEARA 1559
Cdd:TIGR02169 421 ELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLskyeqelYDLKEEYDRVEKELSKLQRELA-EAEAQA 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1560 KESETSLYENNKLhgrVVLLEEEIQRLRVCSEQL-QTENFTLTQEKTNSEQKVEEIIKEKELLSAETAQLAANIETLKSD 1638
Cdd:TIGR02169 500 RASEERVRGGRAV---EEVLKASIQGVHGTVAQLgSVGERYATAIEVAAGNRLNNVVVEDDAVAKEAIELLKRRKAGRAT 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1639 FAALSKskleLQELHSCLTKILDDLRLNHEVALTERAE--------VLQDNK--NLLAEKREMMLRNEEALKEKEKLEES 1708
Cdd:TIGR02169 577 FLPLNK----MRDERRDLSILSEDGVIGFAVDLVEFDPkyepafkyVFGDTLvvEDIEAARRLMGKYRMVTLEGELFEKS 652
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1709 YFIlqkeisqlaqTNSHISANLLESQSenrtlRKDKSKLTLKIRELETLHsftaaQTAEDAMQIMEQMTKEKTETLASLE 1788
Cdd:TIGR02169 653 GAM----------TGGSRAPRGGILFS-----RSEPAELQRLRERLEGLK-----RELSSLQSELRRIENRLDELSQELS 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1789 DTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTR 1868
Cdd:TIGR02169 713 DASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSR 792
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1869 -DEVTSH-QKLEEERSVLNNQLLEMKKSLPSNTLRES----------EFRKDADEEKASLQKSISLTSALLTEKDAELEK 1936
Cdd:TIGR02169 793 iPEIQAElSKLEEEVSRIEARLREIEQKLNRLTLEKEylekeiqelqEQRIDLKEQIKSIEKEIENLNGKKEELEEELEE 872
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1937 LRNEVTVLRGENATAKS----LHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDAQAEEDERAQESQQMIDF 2012
Cdd:TIGR02169 873 LEAALRDLESRLGDLKKerdeLEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELS 952
|
810
....*....|....*
gi 1720414365 2013 LNSVIVDLQRKNQDL 2027
Cdd:TIGR02169 953 LEDVQAELQRVEEEI 967
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1016-1840 |
2.05e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.79 E-value: 2.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1016 KEIEVMSEELRGLKSEK--QLYAQEANALKLEK-GSLLSKLIEVETKITLlqedqqklwsvNETLHLEKERVSEEKQVAE 1092
Cdd:TIGR02169 180 EEVEENIERLDLIIDEKrqQLERLRREREKAERyQALLKEKREYEGYELL-----------KEKEALERQKEAIERQLAS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1093 KRYQQEHR-----DRESLVAEREKLLKEINA-----AQEELLKMHMENDSLEASKVSMQVLIEELRFCKDKLMAMSEKAR 1162
Cdd:TIGR02169 249 LEEELEKLteeisELEKRLEEIEQLLEELNKkikdlGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1163 AEKEHLEGQVKKLTAENLVLVKDKDdviqKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENL 1242
Cdd:TIGR02169 329 AEIDKLLAEIEELEREIEEERKRRD----KLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINEL 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1243 LQTNRDLQFEKDTLRQGQEKLSASLEATLQVKQLLSTEAETLRTQLDCASKALRKAELDMRQLQTSNSSLTKLLEEIKTC 1322
Cdd:TIGR02169 405 KRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1323 RAITDSECIQLLHEKESLAASERTLLAEKEELLSENR----IITEKLSKQSEEVARLEMGLNEKITYLTSEKE-VACQKV 1397
Cdd:TIGR02169 485 LSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQgvhgTVAQLGSVGERYATAIEVAAGNRLNNVVVEDDaVAKEAI 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1398 AKLKKQQDS----LLKEKSALELQNGDLLAdRESSIKTIGDLRRKYDQEATNRRIVMQEKMkLLGNIDALKKELQERK-- 1471
Cdd:TIGR02169 565 ELLKRRKAGratfLPLNKMRDERRDLSILS-EDGVIGFAVDLVEFDPKYEPAFKYVFGDTL-VVEDIEAARRLMGKYRmv 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1472 ---KENQELTSSKCDLSLLLKEAQDAKKNLEKEHTSMIQAKDNLNAELKTccceknmllrdglnlqeecqkLNEEIREIQ 1548
Cdd:TIGR02169 643 tleGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSS---------------------LQSELRRIE 701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1549 QtLILEKEARAKESETSLYENNKlhgRVVLLEEEIQRLRVCSEQLQTENFTLTQEKTNSEQKVEEIIKEKELLSAETAQL 1628
Cdd:TIGR02169 702 N-RLDELSQELSDASRKIGEIEK---EIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKL 777
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1629 AANIETLK-----SDFAALSKSKLELQELHSCLTKILDDL------RLNHEVALTERAEVLQDNKNLLAEKREMMLRNEE 1697
Cdd:TIGR02169 778 EEALNDLEarlshSRIPEIQAELSKLEEEVSRIEARLREIeqklnrLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIE 857
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1698 ALK-EKEKLEESYFILQKEISQLAQTNSHISANLLESQSENRTLRKDKSKLTLKIRELETLHSFTAAQTAEDAMQIME-- 1774
Cdd:TIGR02169 858 NLNgKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEie 937
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720414365 1775 ---QMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEE----------LNKSKELLSVENQKMEEFKKEIETLK 1840
Cdd:TIGR02169 938 dpkGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEyeevlkrldeLKEKRAKLEEERKAILERIEEYEKKK 1016
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
702-1376 |
2.36e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 72.66 E-value: 2.36e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 702 RKANSEGKLE--------LETLRQQLEgaeKQIKNLETERN-AEssKANSITKELQEKELVLTGLQDslnqvnqvkETLE 772
Cdd:COG1196 173 RKEEAERKLEateenlerLEDILGELE---RQLEPLERQAEkAE--RYRELKEELKELEAELLLLKL---------RELE 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 773 KELQTLKEKFASTSEEAVSAQTRMQDtvnklhqkeeqfnvLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDI 852
Cdd:COG1196 239 AELEELEAELEELEAELEELEAELAE--------------LEAELEELRLELEELELELEEAQAEEYELLAELARLEQDI 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 853 AEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLE 932
Cdd:COG1196 305 ARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEEL 384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 933 LEKKME--TSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKSLTYL 1010
Cdd:COG1196 385 AEELLEalRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLEL 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1011 LTSAKKEIEVMSEELRGLKSEKQLYAQEANALKLEKGSLLSKLIEVetKITLLQEDQQKLW-SVNETLHLEKERVSEEKQ 1089
Cdd:COG1196 465 LAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGV--KAALLLAGLRGLAgAVAVLIGVEAAYEAALEA 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1090 VAEKRYQQEHRDRESLVAEREKLLKEINAAQEELLKMHMENDSLEASKVSMQVLIEELRfckdklmamsekaraekehle 1169
Cdd:COG1196 543 ALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAV--------------------- 601
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1170 gqvkkltaenlvlvkdkdDVIQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENLLQTNRDL 1249
Cdd:COG1196 602 ------------------DLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLT 663
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1250 QFEKDTLRQGQEKLSASLEATLQVKQLLSTEAETLRTQLDCASKALRKAELDMRQLQTSNSSLTKLLEEiktcraitdse 1329
Cdd:COG1196 664 GGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEA----------- 732
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 1720414365 1330 ciqllhEKESLAASERTLLAEKEELLSENRIITEKLSKQSEEVARLE 1376
Cdd:COG1196 733 ------EREELLEELLEEEELLEEEALEELPEPPDLEELERELERLE 773
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
648-1545 |
2.54e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.79 E-value: 2.54e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 648 VEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEvignftsQLSAVKEKLLDLDALRKanSEGKLELETLRQQLEGAEKQIK 727
Cdd:TIGR02169 170 RKKEKALEELEEVEENIERLDLIIDEKRQQLE-------RLRREREKAERYQALLK--EKREYEGYELLKEKEALERQKE 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 728 NLETERNAESSKANSITKELQEKELVLTGLQDSLNQVN-QVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQK 806
Cdd:TIGR02169 241 AIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNkKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDA 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 807 EEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLEndiaeimkmsgdnssqltkmnDELRLKERSVEELQLK 886
Cdd:TIGR02169 321 EERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELK---------------------EELEDLRAELEEVDKE 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 887 LTKANENASFLQKSIGEVTLKAEQSQQQAARKheeekkeleekllelekkmetsynqcqdlkakyekasSETKTKHEEIL 966
Cdd:TIGR02169 380 FAETRDELKDYREKLEKLKREINELKRELDRL-------------------------------------QEELQRLSEEL 422
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 967 QNLQKMLADTEDKLKAAQEANRDLmqdMEELKTQADKAKSLTYLLTSAKKEIEVMSEELRGLKSEKQLYAQEANALKLEK 1046
Cdd:TIGR02169 423 ADLNAAIAGIEAKINELEEEKEDK---ALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQA 499
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1047 GSLLSKLIEVETKITLLQEDQQKLW-SVNETLHLEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEELLK 1125
Cdd:TIGR02169 500 RASEERVRGGRAVEEVLKASIQGVHgTVAQLGSVGERYATAIEVAAGNRLNNVVVEDDAVAKEAIELLKRRKAGRATFLP 579
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1126 MH-MENDSLEASKVSMQVLIE---ELRFCKDK-------------LMAMSEKARAekehLEGQVKKLTAENLVLvkDKDD 1188
Cdd:TIGR02169 580 LNkMRDERRDLSILSEDGVIGfavDLVEFDPKyepafkyvfgdtlVVEDIEAARR----LMGKYRMVTLEGELF--EKSG 653
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1189 VIQKLQSAYEELVKDQKALVQEIEDLTTEKKSaaekqmsldntcltLKAERENLLQTNRDLQFEKDTLRQGQEKLSASLE 1268
Cdd:TIGR02169 654 AMTGGSRAPRGGILFSRSEPAELQRLRERLEG--------------LKRELSSLQSELRRIENRLDELSQELSDASRKIG 719
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1269 ATLQVKQLLSTEAETLRtqldcaskalRKAELDMRQLQTSNSSLTKLLEEIKTCRAITDSECIQLLHEKESLAASERTLL 1348
Cdd:TIGR02169 720 EIEKEIEQLEQEEEKLK----------ERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLS 789
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1349 AEKEellsenRIITEKLSKQSEEVARLEMGLNE---KITYLTSEKEVACQKVAKLKKQQDsllkeksALELQNGDLLADR 1425
Cdd:TIGR02169 790 HSRI------PEIQAELSKLEEEVSRIEARLREieqKLNRLTLEKEYLEKEIQELQEQRI-------DLKEQIKSIEKEI 856
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1426 ESSIKTIGDLRRKYDQEATNRRIVMQEKMKLLGNIDALKKELQERKKENQELTSSKCDLSLLLKEAQDAKKNLEKEHTSM 1505
Cdd:TIGR02169 857 ENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEI 936
|
890 900 910 920
....*....|....*....|....*....|....*....|
gi 1720414365 1506 IQAKDNLNAElktccCEKNMLLRDglnLQEECQKLNEEIR 1545
Cdd:TIGR02169 937 EDPKGEDEEI-----PEEELSLED---VQAELQRVEEEIR 968
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1282-2011 |
3.01e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.40 E-value: 3.01e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1282 ETLRTQLDCASKALR-KAELDMRQLQTSNSSLTKLLEEIKTCRAITDseciqllhEKESLAASERTLLAEKEELLSENRI 1360
Cdd:TIGR02168 203 KSLERQAEKAERYKElKAELRELELALLVLRLEELREELEELQEELK--------EAEEELEELTAELQELEEKLEELRL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1361 ITEKLSKQSEEVARLEMGLNEKITYLTSEKEVACQKVAKLKKQQDSLLKEKSALELQNGDLLADRESSIKTIGDLRRKYD 1440
Cdd:TIGR02168 275 EVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELE 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1441 ---QEATNRRIVMQEkmkLLGNIDALKKELQERKKE----NQELTSSKCDLSLLLKEAQDAKKNLEKEHTSMIQAKDNL- 1512
Cdd:TIGR02168 355 sleAELEELEAELEE---LESRLEELEEQLETLRSKvaqlELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLe 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1513 NAELKTCCCEKNMLLRDGLNLQEECQKLNEEIREIQQTLILEKEARAKESETSLYENNKLHGRVVLLEEEIQRLRVCSEQ 1592
Cdd:TIGR02168 432 EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKAL 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1593 LQTEN-----FTLTQEKTNSEQKVEEIIkEKELLSAETAQLAANIETLKSDFAALSKSKLELQELHSCLTKILDDLRLNH 1667
Cdd:TIGR02168 512 LKNQSglsgiLGVLSELISVDEGYEAAI-EAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGND 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1668 EVALTERAEVLQDNKNLLAEKREMM---------------LRNEEALKEKEKLEESYFILQKEI----SQLAQTNSHISA 1728
Cdd:TIGR02168 591 REILKNIEGFLGVAKDLVKFDPKLRkalsyllggvlvvddLDNALELAKKLRPGYRIVTLDGDLvrpgGVITGGSAKTNS 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1729 NLLESQSENRTLRKDKSKLTLKIRELET-----LHSFTAAQTA-EDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELD 1802
Cdd:TIGR02168 671 SILERRREIEELEEKIEELEEKIAELEKalaelRKELEELEEElEQLRKELEELSRQISALRKDLARLEAEVEQLEERIA 750
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1803 TLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVtshQKLEEERS 1882
Cdd:TIGR02168 751 QLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEA---ANLRERLE 827
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1883 VLNNQLLEMKKSLPsntlRESEFRKDADEEKASLQKSISLTSALLTEKDAELEKLRNEVTVLRGEnatakslhsvVQTLE 1962
Cdd:TIGR02168 828 SLERRIAATERRLE----DLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEA----------LALLR 893
|
730 740 750 760
....*....|....*....|....*....|....*....|....*....
gi 1720414365 1963 SDKVKLELKVKNLELQLKENKRQLSSSsgnTDAQAEEDERAQESQQMID 2011
Cdd:TIGR02168 894 SELEELSEELRELESKRSELRRELEEL---REKLAQLELRLEGLEVRID 939
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
211-271 |
3.17e-12 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 72.03 E-value: 3.17e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720414365 211 LKVGDRVLVGGTKaGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLF 271
Cdd:COG5244 4 LSVNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIF 63
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
340-1087 |
3.50e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 72.07 E-value: 3.50e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 340 EAKMDQLRTMVEAADREKVELLnqLEEEKRKVEDLQFRVEEESitkgdletqtKLEHARTKELEQSLLFEKTKADKLQRE 419
Cdd:pfam15921 58 EVELDSPRKIIAYPGKEHIERV--LEEYSHQVKDLQRRLNESN----------ELHEKQKFYLRQSVIDLQTKLQEMQME 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 420 ledtRVATVSEKSRIMELEKDLALRAQEVAElrrRLESSKppgdvDMSLSLLQEISALQEKLEAIHTDHQGEMTSLKEHF 499
Cdd:pfam15921 126 ----RDAMADIRRRESQSQEDLRNQLQNTVH---ELEAAK-----CLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSIL 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 500 GAREEAFQKEI-----------KALHTATEKLSKENESLRSKLdhankenSDVIALWKSKLETAIASHQQAMEELkvsfs 568
Cdd:pfam15921 194 VDFEEASGKKIyehdsmstmhfRSLGSAISKILRELDTEISYL-------KGRIFPVEDQLEALKSESQNKIELL----- 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 569 kgigtdsaeFAELKTQIERLRLDYQHEIESLQSKQDSERS---AHAKEMETMQ-------AKLMKIIKEKEDSLEAVKAR 638
Cdd:pfam15921 262 ---------LQQHQDRIEQLISEHEVEITGLTEKASSARSqanSIQSQLEIIQeqarnqnSMYMRQLSDLESTVSQLRSE 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 639 LDSAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKYTEQSeviGNFTSQLSAV------KEKLLDLDA-----LRKANSE 707
Cdd:pfam15921 333 LREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQES---GNLDDQLQKLladlhkREKELSLEKeqnkrLWDRDTG 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 708 GKLELETLRQQLEGAEKQIKNLETERNAESSKANSitkELQEKELVLTGLQDSLNQVNQVKETLEKELQTLK---EKFAS 784
Cdd:pfam15921 410 NSITIDHLRRELDDRNMEVQRLEALLKAMKSECQG---QMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRkvvEELTA 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 785 TSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLE---------NDIAEI 855
Cdd:pfam15921 487 KKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEalklqmaekDKVIEI 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 856 MKMSGDNSSQLT-------------KMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQ-QAARKHEE 921
Cdd:pfam15921 567 LRQQIENMTQLVgqhgrtagamqveKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLvNAGSERLR 646
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 922 EKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMladtEDKLKAAQ---EANRDLMQDMEELK 998
Cdd:pfam15921 647 AVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKL----KMQLKSAQselEQTRNTLKSMEGSD 722
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 999 TQADK-AKSLTYLLTSAKKEIEVMSEELRGLKSEKQLYAQEANALKLEKGSLLSKLIEVETkitllqeDQQKLWSVNETL 1077
Cdd:pfam15921 723 GHAMKvAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVAT-------EKNKMAGELEVL 795
|
810
....*....|
gi 1720414365 1078 HLEKERVSEE 1087
Cdd:pfam15921 796 RSQERRLKEK 805
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
546-1117 |
7.85e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.12 E-value: 7.85e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 546 KSKLETAIASHQQAMEELKvsfskgigtdsAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMETMQAKlmKII 625
Cdd:COG1196 241 LEELEAELEELEAELEELE-----------AELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDI--ARL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 626 KEKEDSLEAVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKELE-VLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKA 704
Cdd:COG1196 308 EERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEeELEEAEAELAEAEEALLEAEAELAEAEEELEELAEE 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 705 NSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFAS 784
Cdd:COG1196 388 LLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAE 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 785 TSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDRE-----DQLVKAKEKLENDIAEIMKMS 859
Cdd:COG1196 468 LLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGlagavAVLIGVEAAYEAALEAALAAA 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 860 G-----DNSSQLTKMNDEL-RLKERSVEELQL---KLTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKL 930
Cdd:COG1196 548 LqnivvEDDEVAAAAIEYLkAAKAGRATFLPLdkiRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTL 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 931 LELEKKMETSYN------------QCQDLKAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELK 998
Cdd:COG1196 628 VAARLEAALRRAvtlagrlrevtlEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEER 707
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 999 TQADKAKSLTYLLTSAKKEIEVMSEELRGLKSEKQLYAQEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSVNetlh 1078
Cdd:COG1196 708 ELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGPVN---- 783
|
570 580 590
....*....|....*....|....*....|....*....
gi 1720414365 1079 lekERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEIN 1117
Cdd:COG1196 784 ---LLAIEEYEELEERYDFLSEQREDLEEARETLEEAIE 819
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
350-1129 |
8.27e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 70.87 E-value: 8.27e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 350 VEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARTKEL-EQSLLFEKTKADKLQRELEDTRvATV 428
Cdd:TIGR02169 232 KEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLgEEEQLRVKEKIGELEAEIASLE-RSI 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 429 SEKSRIME--------LEKDLALRAQEVAELRRRLESSKPPGDvdmslSLLQEISALQEKLEAIHTDHQGEMTSLKEHFG 500
Cdd:TIGR02169 311 AEKERELEdaeerlakLEAEIDKLLAEIEELEREIEEERKRRD-----KLTEEYAELKEELEDLRAELEEVDKEFAETRD 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 501 A------REEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDV---IALWKSKLETAIASHQQAMEELKvSFSKGI 571
Cdd:TIGR02169 386 ElkdyreKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIeakINELEEEKEDKALEIKKQEWKLE-QLAADL 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 572 GTDSAEFAELKTQIERLrldyQHEIESLQSKQDsERSAHAKEMETMQAKLMKIIKEKEDSLEAVK---ARLDSAEDQHLV 648
Cdd:TIGR02169 465 SKYEQELYDLKEEYDRV----EKELSKLQRELA-EAEAQARASEERVRGGRAVEEVLKASIQGVHgtvAQLGSVGERYAT 539
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 649 EMEDTL-NKLQEAeikVKELEVLQAKYTE--QSEVIGNFTS-QLSAVKEKLLDLDALRKANSEG-KLELETLRQQLEGAE 723
Cdd:TIGR02169 540 AIEVAAgNRLNNV---VVEDDAVAKEAIEllKRRKAGRATFlPLNKMRDERRDLSILSEDGVIGfAVDLVEFDPKYEPAF 616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 724 KQI-------KNLETERNAESS-KANSITKELQEKELVLTG--------------LQDSLNQVNQVKETLEKELQTLKEK 781
Cdd:TIGR02169 617 KYVfgdtlvvEDIEAARRLMGKyRMVTLEGELFEKSGAMTGgsraprggilfsrsEPAELQRLRERLEGLKRELSSLQSE 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 782 FASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDdredqlvkakEKLENDIAEimkmsgd 861
Cdd:TIGR02169 697 LRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLE----------QEIENVKSE------- 759
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 862 nssqLTKMNDELRLKERSVEELQLKLT--KANENASFLQKSIGEVT-LKAEQSQQQAARKH-EEEKKELEEKLLELEKKM 937
Cdd:TIGR02169 760 ----LKELEARIEELEEDLHKLEEALNdlEARLSHSRIPEIQAELSkLEEEVSRIEARLREiEQKLNRLTLEKEYLEKEI 835
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 938 ETSYNQCQDLKAKyekassetKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKsltylltsakKE 1017
Cdd:TIGR02169 836 QELQEQRIDLKEQ--------IKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELE----------AQ 897
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1018 IEVMSEELRGLKSEKQLYAQEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSVnETLHLEKERVSEEKQV------- 1090
Cdd:TIGR02169 898 LRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSL-EDVQAELQRVEEEIRAlepvnml 976
|
810 820 830 840
....*....|....*....|....*....|....*....|....*.
gi 1720414365 1091 -------AEKRYQQEHRDRESLVAEREKLLKEINAAQEELLKMHME 1129
Cdd:TIGR02169 977 aiqeyeeVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREVFME 1022
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
338-1121 |
9.15e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 70.87 E-value: 9.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 338 ELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQfrvEEESitkgdLETQTKLE--HARTKELEQSLLFEKTKADK 415
Cdd:TIGR02169 248 SLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLG---EEEQ-----LRVKEKIGelEAEIASLERSIAEKERELED 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 416 LQRELEDTRVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKppgdvdmslsllQEISALQEKLEAIHTDHQgemTSL 495
Cdd:TIGR02169 320 AEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELK------------EELEDLRAELEEVDKEFA---ETR 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 496 KEHFGARE--EAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDV---IALWKSKLETAIASHQQAMEELKvSFSKG 570
Cdd:TIGR02169 385 DELKDYREklEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIeakINELEEEKEDKALEIKKQEWKLE-QLAAD 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 571 IGTDSAEFAELKTQIERLrldyQHEIESLQSKQDsERSAHAKEMETMQAKLMKIIKEKEDSLEAVK---ARLDSAEDQHL 647
Cdd:TIGR02169 464 LSKYEQELYDLKEEYDRV----EKELSKLQRELA-EAEAQARASEERVRGGRAVEEVLKASIQGVHgtvAQLGSVGERYA 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 648 VEMEDTL-NKLQEAeikVKELEVLQAKYTE--QSEVIGNFTS-QLSAVKEKLLDLDALRKANSEG-KLELETLRQQLEGA 722
Cdd:TIGR02169 539 TAIEVAAgNRLNNV---VVEDDAVAKEAIEllKRRKAGRATFlPLNKMRDERRDLSILSEDGVIGfAVDLVEFDPKYEPA 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 723 EKQI-------KNLETERN-AESSKANSITKELQEKELVLTG--------------LQDSLNQVNQVKETLEKELQTLKE 780
Cdd:TIGR02169 616 FKYVfgdtlvvEDIEAARRlMGKYRMVTLEGELFEKSGAMTGgsraprggilfsrsEPAELQRLRERLEGLKRELSSLQS 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 781 KFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDdredqlvkakEKLENDIAEimkmsg 860
Cdd:TIGR02169 696 ELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLE----------QEIENVKSE------ 759
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 861 dnssqLTKMNDELRLKERSVEELQLKLT--KANENASFLQKSIGEVT-LKAEQSQQQAARKH-EEEKKELEEKLLELEKK 936
Cdd:TIGR02169 760 -----LKELEARIEELEEDLHKLEEALNdlEARLSHSRIPEIQAELSkLEEEVSRIEARLREiEQKLNRLTLEKEYLEKE 834
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 937 METSYNQCQDLKAKyekassetKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKaksltylltsAKK 1016
Cdd:TIGR02169 835 IQELQEQRIDLKEQ--------IKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDE----------LEA 896
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1017 EIEVMSEELRGLKSEKQLYAQEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSVnETLHLEKERVSEEKQ------- 1089
Cdd:TIGR02169 897 QLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSL-EDVQAELQRVEEEIRalepvnm 975
|
810 820 830
....*....|....*....|....*....|..
gi 1720414365 1090 VAEKRYQQEHRDRESLVAEREKLLKEINAAQE 1121
Cdd:TIGR02169 976 LAIQEYEEVLKRLDELKEKRAKLEEERKAILE 1007
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
848-1757 |
2.09e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 69.71 E-value: 2.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 848 LENDIAEIMKMSG--------------DNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSigevTLKAEQSQQ 913
Cdd:TIGR02169 140 LQGDVTDFISMSPverrkiideiagvaEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRRE----REKAERYQA 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 914 QAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKakyekassETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQD 993
Cdd:TIGR02169 216 LLKEKREYEGYELLKEKEALERQKEAIERQLASLE--------EELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEE 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 994 mEELKTQADKAkSLTYLLTSAKKEIEVMSEELRGLKSEKQLYAQEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSV 1073
Cdd:TIGR02169 288 -EQLRVKEKIG-ELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEE 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1074 NETLHLEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEELLKMHMENDSLEASkvsmqvlIEELRFCKDK 1153
Cdd:TIGR02169 366 LEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAA-------IAGIEAKINE 438
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1154 LMAMSEKARAEKEHLEGQVKKLTAEnlvlVKDKDDVIQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCL 1233
Cdd:TIGR02169 439 LEEEKEDKALEIKKQEWKLEQLAAD----LSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEE 514
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1234 TLKAERENLLQTNRDL-QFEKDTLRQGQEKLSASLEATLQVKQLLSTEAetlrTQLDCASKALRKAELDMRQLQTSNSSL 1312
Cdd:TIGR02169 515 VLKASIQGVHGTVAQLgSVGERYATAIEVAAGNRLNNVVVEDDAVAKEA----IELLKRRKAGRATFLPLNKMRDERRDL 590
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1313 TKLLEEIKTCRAITDSECIQlLHEKESLAASERTLLAEKEE----LLSENRIIT---EKLSKQSEEV--ARLEMGLNEKI 1383
Cdd:TIGR02169 591 SILSEDGVIGFAVDLVEFDP-KYEPAFKYVFGDTLVVEDIEaarrLMGKYRMVTlegELFEKSGAMTggSRAPRGGILFS 669
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1384 TYLTSEKEVACQKVAKLKKQQDSLLKEKSALELQNGDLLADRESSIKTIGDLRRKYDQEATNRRIVMQEKMKLLGNIDAL 1463
Cdd:TIGR02169 670 RSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSL 749
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1464 KKELQERKKENQELTSSKCDLSLLLKEAQDAKKNLEKehtsmiqakdnlnaelktccceknMLLRDGL-NLQEECQKLNE 1542
Cdd:TIGR02169 750 EQEIENVKSELKELEARIEELEEDLHKLEEALNDLEA------------------------RLSHSRIpEIQAELSKLEE 805
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1543 EIREIqqtlilekEARAKESETSLyenNKLHGRVVLLEEEIQrlrvcseQLQTENFTLTQEKTNSEQKVEEIIKEKELLS 1622
Cdd:TIGR02169 806 EVSRI--------EARLREIEQKL---NRLTLEKEYLEKEIQ-------ELQEQRIDLKEQIKSIEKEIENLNGKKEELE 867
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1623 AETAQLAANIETLKSDFAALSKSKLELQELHSCLTKILDDLRLNHEVA------LTERAEVLQDNKNLLAEKREMMLRNE 1696
Cdd:TIGR02169 868 EELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKrkrlseLKAKLEALEEELSEIEDPKGEDEEIP 947
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414365 1697 EALKEKEKLEESYFILQKEISQLAQTN-------SHISANLLESQSENRTLRKDKSKLTLKIRELETL 1757
Cdd:TIGR02169 948 EEELSLEDVQAELQRVEEEIRALEPVNmlaiqeyEEVLKRLDELKEKRAKLEEERKAILERIEEYEKK 1015
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
338-857 |
4.15e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 68.55 E-value: 4.15e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 338 ELEAKMDQLRTMVEAADREKVEL---LNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARTKELEQSL--LFEKTK 412
Cdd:PRK03918 211 EISSELPELREELEKLEKEVKELeelKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVkeLKELKE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 413 ADKLQRELEDTRVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKPPGDvdmslSLLQEISALQEKLEAIHTDHQ--- 489
Cdd:PRK03918 291 KAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLE-----ELKKKLKELEKRLEELEERHElye 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 490 ------GEMTSLKEHFGARE-EAFQKEIKALHTATEKLSKENESLRSKldhankensdvialwKSKLETAIASHQQAMEE 562
Cdd:PRK03918 366 eakakkEELERLKKRLTGLTpEKLEKELEELEKAKEEIEEEISKITAR---------------IGELKKEIKELKKAIEE 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 563 LKVsfskgigtdsaefAELKTQIERLRLDYQHEIEsLQSKQDSERSAHAKEMETMQAKLMKIIKEKedsleaVKARLDSA 642
Cdd:PRK03918 431 LKK-------------AKGKCPVCGRELTEEHRKE-LLEEYTAELKRIEKELKEIEEKERKLRKEL------RELEKVLK 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 643 EDQHLVEMEDTLNKLQEAEIKVKE--LEVLQAKYTEQSEV---IGNFTSQLSAVKEKLLDLDALRKANSEGKLELETLRQ 717
Cdd:PRK03918 491 KESELIKLKELAEQLKELEEKLKKynLEELEKKAEEYEKLkekLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEE 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 718 QLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLnqvnqvkETLEKELQTLKEKFASTSEEAVSAQTRMQ 797
Cdd:PRK03918 571 ELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKEL-------EREEKELKKLEEELDKAFEELAETEKRLE 643
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720414365 798 DTVNKLHQKEEQFNV-----LSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMK 857
Cdd:PRK03918 644 ELRKELEELEKKYSEeeyeeLREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREK 708
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
336-855 |
4.19e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.42 E-value: 4.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 336 VLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARTKELEQSLLFEKTKADK 415
Cdd:COG1196 297 LARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAE 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 416 LQRELEDTRVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKppgdvDMSLSLLQEISALQEKLEAIHTDHQGEMTSL 495
Cdd:COG1196 377 AEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLE-----EELEELEEALAELEEEEEEEEEALEEAAEEE 451
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 496 KEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIALWKSKLE---TAIASHQQAMEELKVSFSKGIG 572
Cdd:COG1196 452 AELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFlegVKAALLLAGLRGLAGAVAVLIG 531
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 573 TDSAEFAELKTQIERLRLDYQHE--------IESLQSKQ---------DSERSAHAKEMETMQAKLMKIIKEKEDSLEAV 635
Cdd:COG1196 532 VEAAYEAALEAALAAALQNIVVEddevaaaaIEYLKAAKagratflplDKIRARAALAAALARGAIGAAVDLVASDLREA 611
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 636 KARLDSAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLELETL 715
Cdd:COG1196 612 DARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEE 691
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 716 RQQLEGAEKQIKNLETERNAESSkansitKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTr 795
Cdd:COG1196 692 ELELEEALLAEEEEERELAEAEE------ERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEE- 764
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720414365 796 MQDTVNKLHQKEEQF---NVLS-SELEKLRENLTDMEAKfkekddREDqLVKAKEKLENDIAEI 855
Cdd:COG1196 765 LERELERLEREIEALgpvNLLAiEEYEELEERYDFLSEQ------RED-LEEARETLEEAIEEI 821
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
338-855 |
4.60e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.42 E-value: 4.60e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 338 ELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARTKELEQSLLFEKTKADKLQ 417
Cdd:COG1196 250 ELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELE 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 418 RELEDTRVATVSEKSRIMELEKDLALRAQEVAELRRRLESskppgDVDMSLSLLQEISALQEKLEAIHTDHQgEMTSLKE 497
Cdd:COG1196 330 EELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLE-----AEAELAEAEEELEELAEELLEALRAAA-ELAAQLE 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 498 HFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDvIALWKSKLETAIASHQQAMEELKVSFSKGIGTDSAE 577
Cdd:COG1196 404 ELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEE-AAEEEAELEEEEEALLELLAELLEEAALLEAALAEL 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 578 FAELKTQIERLRLDyQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQHLVEMEDTLNKL 657
Cdd:COG1196 483 LEELAEAAARLLLL-LEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAA 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 658 QEAEIKVK--------ELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLELETLRQ-QLEGAEKQIKN 728
Cdd:COG1196 562 AIEYLKAAkagratflPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAaRLEAALRRAVT 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 729 LETER----------NAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQD 798
Cdd:COG1196 642 LAGRLrevtlegeggSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEEL 721
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414365 799 TVNKL-HQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEI 855
Cdd:COG1196 722 EEEALeEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
806-1702 |
6.60e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 68.17 E-value: 6.60e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 806 KEEQFNVLSSELEklrenltdmEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQL 885
Cdd:TIGR02169 209 KAERYQALLKEKR---------EYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNK 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 886 KLTKANENASF-LQKSIGEVTLKAEQSQQQAARKheeekkeleekllelEKKMETSYNQCQDLKAKYEKASSEtKTKHEE 964
Cdd:TIGR02169 280 KIKDLGEEEQLrVKEKIGELEAEIASLERSIAEK---------------ERELEDAEERLAKLEAEIDKLLAE-IEELER 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 965 ILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKSLtylLTSAKKEIEVMSEELRGLKSEKQLYAQEANALKL 1044
Cdd:TIGR02169 344 EIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDE---LKDYREKLEKLKREINELKRELDRLQEELQRLSE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1045 EKGSLLSKLIEVETKITLLQEdqqklwsvnetlhlEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEELL 1124
Cdd:TIGR02169 421 ELADLNAAIAGIEAKINELEE--------------EKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELS 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1125 KMHMENDSLEASKvsmQVLIEELRFCKdklmAMSEKARAEKEHLEGQVKKL----------------TAENLVLVKDKDD 1188
Cdd:TIGR02169 487 KLQRELAEAEAQA---RASEERVRGGR----AVEEVLKASIQGVHGTVAQLgsvgeryataievaagNRLNNVVVEDDAV 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1189 VIQKLqsayeELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAereNLLQTnrDLQFEK-------DTLrqgqe 1261
Cdd:TIGR02169 560 AKEAI-----ELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFAV---DLVEF--DPKYEPafkyvfgDTL----- 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1262 kLSASLEAT---LQVKQLLSTEAETLRTQ--LDCASKALRKAELDMRQLQTSNSSLTKLLEEIKTCRAITDSECIQLLHE 1336
Cdd:TIGR02169 625 -VVEDIEAArrlMGKYRMVTLEGELFEKSgaMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENR 703
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1337 KESLAASERTLLAEKEELLSENRIITEKLSKQSEEVARLEmglnEKITYLTSEKEVACQKVAKLKKQQDSLLKEKSALEL 1416
Cdd:TIGR02169 704 LDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELE----EDLSSLEQEIENVKSELKELEARIEELEEDLHKLEE 779
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1417 QNGDLLAD-RESSIKTIGDLRRKydQEATNRRIVmqekmkllGNIDALKKELQERKKENQELTSSKCDLSLLLKEAQDAK 1495
Cdd:TIGR02169 780 ALNDLEARlSHSRIPEIQAELSK--LEEEVSRIE--------ARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQI 849
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1496 KNLEKEHTSMIQAKDNLNAELKtcccEKNMLLRDglnLQEECQKLNEEIREIQQTLileKEARAKESEtslyennklhgr 1575
Cdd:TIGR02169 850 KSIEKEIENLNGKKEELEEELE----ELEAALRD---LESRLGDLKKERDELEAQL---RELERKIEE------------ 907
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1576 vvlLEEEIQRLRVCSEQLQTENFTLTQEKTNSEQKVEEIIKE-KELLSAEtaQLAANIETLKSDFAALSKSKLELQELHS 1654
Cdd:TIGR02169 908 ---LEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIpEEELSLE--DVQAELQRVEEEIRALEPVNMLAIQEYE 982
|
890 900 910 920
....*....|....*....|....*....|....*....|....*...
gi 1720414365 1655 CLTKILDDLRLNHEVALTERAEVLQDNKNLLAEKREMMLRNEEALKEK 1702
Cdd:TIGR02169 983 EVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREVFMEAFEAINEN 1030
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
60-121 |
9.45e-11 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 67.02 E-value: 9.45e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720414365 60 VGERVWVNGNKpGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRP 121
Cdd:COG5244 6 VNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIFIRP 66
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
335-828 |
9.53e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 67.45 E-value: 9.53e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 335 HVLELEAKMDQLRTMVEAADREKVELLNQLEEE---------KRKVEDLQFRVEEESItkgDLETQTKLEHARTKELEQS 405
Cdd:pfam15921 318 QLSDLESTVSQLRSELREAKRMYEDKIEELEKQlvlanseltEARTERDQFSQESGNL---DDQLQKLLADLHKREKELS 394
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 406 LLFEKTK------------ADKLQRELEDTRVatvsEKSRIMELEKDLALRAQ------------------EVAELRRRL 455
Cdd:pfam15921 395 LEKEQNKrlwdrdtgnsitIDHLRRELDDRNM----EVQRLEALLKAMKSECQgqmerqmaaiqgknesleKVSSLTAQL 470
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 456 ESSKppgdvDMSLSLLQEISALQEKLEAIHTDHQGEMTSLKEHFGAREeAFQKEIKALHTATEKLSKENESLRSKLDHAN 535
Cdd:pfam15921 471 ESTK-----EMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIE-ATNAEITKLRSRVDLKLQELQHLKNEGDHLR 544
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 536 KENSDVIAL-----WKSKLETAIASHQQAMEELKVSFSKGIGTDSAEFAELKTQIERLRLDYQhEIESLQSKQDSERSAH 610
Cdd:pfam15921 545 NVQTECEALklqmaEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQ-EFKILKDKKDAKIREL 623
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 611 AKEMETMQAKLMKIIKEKEDSLEAVKaRLDSAEDQHLVEMEDTLNKLQEAEikvKELEVLQAKYTEQSEVIGNFTSQLsa 690
Cdd:pfam15921 624 EARVSDLELEKVKLVNAGSERLRAVK-DIKQERDQLLNEVKTSRNELNSLS---EDYEVLKRNFRNKSEEMETTTNKL-- 697
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 691 vkeklldldalrkansegKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKET 770
Cdd:pfam15921 698 ------------------KMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTN 759
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414365 771 LEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHqkeeqfnVLSSELEKLRENLTDME 828
Cdd:pfam15921 760 ANKEKHFLKEEKNKLSQELSTVATEKNKMAGELE-------VLRSQERRLKEKVANME 810
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
711-1224 |
2.71e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 65.81 E-value: 2.71e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 711 ELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQdslnQVNQVKETLEKELQTLKEKFASTSEEAV 790
Cdd:TIGR04523 160 KYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLK----KKIQKNKSLESQISELKKQNNQLKDNIE 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 791 SAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQltKMN 870
Cdd:TIGR04523 236 KKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNK--ELK 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 871 DELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAE------QSQQQAARKHEEEKKELEEKLLELEKKMETSYNQC 944
Cdd:TIGR04523 314 SELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTnsesenSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQI 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 945 QDLKAKYEKASSETKTKHEEI--LQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKA-KSLTYLLTSAKKEIEVM 1021
Cdd:TIGR04523 394 NDLESKIQNQEKLNQQKDEQIkkLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIiKNLDNTRESLETQLKVL 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1022 SEELRGLKS-------EKQLYAQEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSvnETLHLEKERVSEEKQVAEKR 1094
Cdd:TIGR04523 474 SRSINKIKQnleqkqkELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLES--EKKEKESKISDLEDELNKDD 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1095 YqqehrdreslVAEREKLLKEINAAQEELLKMHMENDSLEASKVSMQVLIEELRFCKDKLMAMSEKARAEKEHLEGQVKK 1174
Cdd:TIGR04523 552 F----------ELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEK 621
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1175 LTAENlvlvKDKDDVIQKLQSAYEELVKDQKaLVQEIEDLTTEKKSAAEK 1224
Cdd:TIGR04523 622 AKKEN----EKLSSIIKNIKSKKNKLKQEVK-QIKETIKEIRNKWPEIIK 666
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1512-2039 |
2.91e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 65.73 E-value: 2.91e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1512 LNAELKTCccEKNMLLRDGLNLQEECQKLNEEIREIQQTLI-LEKEARAKESEtslyennklhgrVVLLEEEIQRLRVCS 1590
Cdd:COG1196 218 LKEELKEL--EAELLLLKLRELEAELEELEAELEELEAELEeLEAELAELEAE------------LEELRLELEELELEL 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1591 EQLQTENFTLTQEKTNSEQKVEEIIKEKELLSAETAQLAANIETLKSDFAALSKSKLELQELHSCLTKILDDLRLNHEVA 1670
Cdd:COG1196 284 EEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEA 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1671 LTERAEVLQDNKNLLAEKREmmLRNEEALKEKEKLEEsyfilQKEISQLAQTNSHISANLLESQSENRTLRKDKSKLTLK 1750
Cdd:COG1196 364 EEALLEAEAELAEAEEELEE--LAEELLEALRAAAEL-----AAQLEELEEAEEALLERLERLEEELEELEEALAELEEE 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1751 IRELEtlhsftaaQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKEnnlKTVEELNKSKELLSVENQKME 1830
Cdd:COG1196 437 EEEEE--------EALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLE---ELAEAAARLLLLLEAEADYEG 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1831 EFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVTSHQKLEEERSVLNNQLLEMKKS-------LPSNTLRES 1903
Cdd:COG1196 506 FLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAkagratfLPLDKIRAR 585
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1904 EFRKDADEEKASLQKSISLTSALltekDAELEKLRNEVTVLRGENATAKSLHSVVQTLESDKVKLELKVKNLELQLKENK 1983
Cdd:COG1196 586 AALAAALARGAIGAAVDLVASDL----READARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGS 661
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 1720414365 1984 RQLSSSSGNTDAQAEEDERAQESQQMIDFLNSVIVDLQRKNQDLKMKVEMMSEAAL 2039
Cdd:COG1196 662 LTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERL 717
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
615-1242 |
3.60e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 65.47 E-value: 3.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 615 ETMQAKLMKIIKEKEDSLEAVKARLDSAEDQHlvemedtlNKLQEAEikvKELEVLQAKYTEQSEVIGNFTSQLSAVKEK 694
Cdd:PRK03918 161 ENAYKNLGEVIKEIKRRIERLEKFIKRTENIE--------ELIKEKE---KELEEVLREINEISSELPELREELEKLEKE 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 695 LLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLET---ERNAESSKANSITKELQEkelvLTGLQDSLNQVNQVKETL 771
Cdd:PRK03918 230 VKELEELKEEIEELEKELESLEGSKRKLEEKIRELEErieELKKEIEELEEKVKELKE----LKEKAEEYIKLSEFYEEY 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 772 EKELQTLKEKFASTSEEAVSAQTRMQDTVNKlhqkeeqfnvlSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENd 851
Cdd:PRK03918 306 LDELREIEKRLSRLEEEINGIEERIKELEEK-----------EERLEELKKKLKELEKRLEELEERHELYEEAKAKKEE- 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 852 IAEIMKMSGDNSsqLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEvtlkaeqsqqqaarkheeekkeleekll 931
Cdd:PRK03918 374 LERLKKRLTGLT--PEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKE---------------------------- 423
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 932 elekkMETSYNQCQDLKAKYEKASSETKTKHE-EILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKSLTYL 1010
Cdd:PRK03918 424 -----LKKAIEELKKAKGKCPVCGRELTEEHRkELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKL 498
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1011 LTSAkKEIEVMSEELRGLKSEKqlyaQEANALKLEKgsLLSKLIEVETKITLLQEDQQKLwsvnETLHLEKERVSEEKQV 1090
Cdd:PRK03918 499 KELA-EQLKELEEKLKKYNLEE----LEKKAEEYEK--LKEKLIKLKGEIKSLKKELEKL----EELKKKLAELEKKLDE 567
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1091 AEKRYQQEHRDRESLVAEReklLKEINAAQEELLKMHMENDSLEASKVSMQVLIEELRFCKDKLmamsEKARAEKEHLEG 1170
Cdd:PRK03918 568 LEEELAELLKELEELGFES---VEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEEL----DKAFEELAETEK 640
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720414365 1171 QVKKLTAENLVLVKDKDDviqklqSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENL 1242
Cdd:PRK03918 641 RLEELRKELEELEKKYSE------EEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEER 706
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
338-889 |
6.40e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 64.78 E-value: 6.40e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 338 ELEAKMDQLRtmvEAADREKVELLNQLEEEKRKVEDLQFRVEE------------ESITKGDlETQTKLEHARTKELEQS 405
Cdd:PTZ00121 1287 EEKKKADEAK---KAEEKKKADEAKKKAEEAKKADEAKKKAEEakkkadaakkkaEEAKKAA-EAAKAEAEAAADEAEAA 1362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 406 LlfEKTKADKLQRELEDTRVATV----SEKSRIMELEKDLALRAQEVAELRRRLESSKPPGDVDMSLSLLQEISALQEKL 481
Cdd:PTZ00121 1363 E--EKAEAAEKKKEEAKKKADAAkkkaEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKA 1440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 482 E----AIHTDHQGEMTSLKEHFGAREEAFQKEIKALHTATEK-----LSKENESLRSKLDHANKENSDVialwKSKLETA 552
Cdd:PTZ00121 1441 EeakkADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAkkadeAKKKAEEAKKKADEAKKAAEAK----KKADEAK 1516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 553 IASHQQAMEELKVSFSKGiGTDSAEFAELKTQIERLRldYQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSL 632
Cdd:PTZ00121 1517 KAEEAKKADEAKKAEEAK-KADEAKKAEEKKKADELK--KAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEAR 1593
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 633 EAVKARLDSAEDQHLVEmedTLNKLQEAEIKVKELEvlqakytEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLEL 712
Cdd:PTZ00121 1594 IEEVMKLYEEEKKMKAE---EAKKAEEAKIKAEELK-------KAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKA 1663
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 713 ETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKEtLEKELQTLKEKFASTSEEAVSA 792
Cdd:PTZ00121 1664 AEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEE-LKKAEEENKIKAEEAKKEAEED 1742
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 793 QTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDqlvkakEKLENDIAEIMKMSGDNSSQLTKMNDE 872
Cdd:PTZ00121 1743 KKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEED------EKRRMEVDKKIKDIFDNFANIIEGGKE 1816
|
570
....*....|....*..
gi 1720414365 873 LRLKERSVEELQLKLTK 889
Cdd:PTZ00121 1817 GNLVINDSKEMEDSAIK 1833
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
338-884 |
6.45e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.57 E-value: 6.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 338 ELEAKMDQLRTMVEAADR--EKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARTK--ELEQSLLFEKTKA 413
Cdd:COG1196 197 ELERQLEPLERQAEKAERyrELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAElaELEAELEELRLEL 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 414 DKLQRELEDTRVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKppGDVDMSLSLLQEISALQEKLEAIHTDHQGEMT 493
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELE--EELAELEEELEELEEELEELEEELEEAEEELE 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 494 SLKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIAlwkskLETAIASHQQAMEELKvSFSKGIGT 573
Cdd:COG1196 355 EAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEE-----LEEAEEALLERLERLE-EELEELEE 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 574 DSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMETM--QAKLMKIIKEKEDSLEAVKARLDSAEDQHLVEME 651
Cdd:COG1196 429 ALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAalLEAALAELLEELAEAAARLLLLLEAEADYEGFLE 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 652 DTLNKLQEAEIK--VKELEVLQAKYTEQSEVIGNFTSQLSA--VKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIK 727
Cdd:COG1196 509 GVKAALLLAGLRglAGAVAVLIGVEAAYEAALEAALAAALQniVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAAL 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 728 NLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKE 807
Cdd:COG1196 589 AAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRR 668
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720414365 808 EQfnvLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQ 884
Cdd:COG1196 669 EL---LAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELL 742
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
624-1164 |
7.52e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 64.29 E-value: 7.52e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 624 IIKEKEDSLEAVKARLDSAEDQHLVEmedtlnKLQEAEIKVKELEvlqakyteqsEVIGNFTSQLSAVKEKLLDLDALRK 703
Cdd:PRK02224 181 VLSDQRGSLDQLKAQIEEKEEKDLHE------RLNGLESELAELD----------EEIERYEEQREQARETRDEADEVLE 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 704 ANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFA 783
Cdd:PRK02224 245 EHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDE 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 784 STSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEK----DDREDQLvkakEKLENDIAEIMKMS 859
Cdd:PRK02224 325 ELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAreavEDRREEI----EELEEEIEELRERF 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 860 GDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSI--GEVTLKA----EQSQQQAARKHEEEKKELEEKLLEL 933
Cdd:PRK02224 401 GDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVeeAEALLEAgkcpECGQPVEGSPHVETIEEDRERVEEL 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 934 EKKMETSYNQCQDLKAKYEKASSETKT-----KHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKSLT 1008
Cdd:PRK02224 481 EAELEDLEEEVEEVEERLERAEDLVEAedrieRLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAA 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1009 yllTSAKKEIEVMSEELRGLKSEKQLYAQEANAL-KLEkgSLLSKLIEVETKITLLQEDQQKLWSVN----ETLHLEKER 1083
Cdd:PRK02224 561 ---AEAEEEAEEAREEVAELNSKLAELKERIESLeRIR--TLLAAIADAEDEIERLREKREALAELNderrERLAEKRER 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1084 VSE---------------EKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQ---EELLKMHMENDSLEASKVSMQVLIE 1145
Cdd:PRK02224 636 KREleaefdearieeareDKERAEEYLEQVEEKLDELREERDDLQAEIGAVEnelEELEELRERREALENRVEALEALYD 715
|
570
....*....|....*....
gi 1720414365 1146 ELrfckDKLMAMSEKARAE 1164
Cdd:PRK02224 716 EA----EELESMYGDLRAE 730
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1310-1986 |
1.21e-09 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 63.59 E-value: 1.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1310 SSLTKLLEEIKTCRAITDSEciqlLHEKESLAASERTLLAEKEELLSENRIITEKLSKQSEEVARLEMGL---NEKITYL 1386
Cdd:pfam05483 81 SKLYKEAEKIKKWKVSIEAE----LKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLikeNNATRHL 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1387 TSEKEVACQKVAKLKKQQDSLLKEKSALELqngDLLADRESSIKTIGDLRrkydQEATNRRIVMQEKMKL-LGNIDALKK 1465
Cdd:pfam05483 157 CNLLKETCARSAEKTKKYEYEREETRQVYM---DLNNNIEKMILAFEELR----VQAENARLEMHFKLKEdHEKIQHLEE 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1466 ELQER--KKENQ---------ELTSSKCDLSLLLKEAQDAKKNLEKEHT-------SMIQAKDNLNAELKTCCCEKNMLL 1527
Cdd:pfam05483 230 EYKKEinDKEKQvsllliqitEKENKMKDLTFLLEESRDKANQLEEKTKlqdenlkELIEKKDHLTKELEDIKMSLQRSM 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1528 RDGLNLQEECQKLNEEIREIQQTLILEKEARAKESETSLYENNKLHGRVVLLEE----EIQRLRVCSEQLQTENFTLtQE 1603
Cdd:pfam05483 310 STQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEEllrtEQQRLEKNEDQLKIITMEL-QK 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1604 KTNSEQKVEEIIKEKELLSAETAQLAANIETLKSDFAALSKSKLELQELHSCLTKILD-------DLRLNHEVALTERAE 1676
Cdd:pfam05483 389 KSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQarekeihDLEIQLTAIKTSEEH 468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1677 VLQDNKNLLAEKREMMLRNEEALKEKEKLeesyfilQKEISQLAQTNSHISANLLESQSENRTLRKDKSKLTLKIRELET 1756
Cdd:pfam05483 469 YLKEVEDLKTELEKEKLKNIELTAHCDKL-------LLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEE 541
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1757 lhsfTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEI 1836
Cdd:pfam05483 542 ----KEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQEN 617
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1837 ETLKQAAAQKSQQLSALQEENVKLAEELGRTRdevtshQKLEEERSVLNNQlLEMKKSLPSNTLRESEFRKDADEEKASL 1916
Cdd:pfam05483 618 KALKKKGSAENKQLNAYEIKVNKLELELASAK------QKFEEIIDNYQKE-IEDKKISEEKLLEEVEKAKAIADEAVKL 690
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720414365 1917 QKSISL-TSALLTEKDAELEKLRNEVTVLRGENATAKSLH-SVVQTLESDKVKLELKVKNLELQLKENKRQL 1986
Cdd:pfam05483 691 QKEIDKrCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYkNKEQEQSSAKAALEIELSNIKAELLSLKKQL 762
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
364-1230 |
1.55e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 63.45 E-value: 1.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 364 LEEEKRKVEDLQFRVEEESITKGDLEtQTKLEHARTKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLAL 443
Cdd:pfam02463 166 RLKRKKKEALKKLIEETENLAELIID-LEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQE 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 444 RAQEVAELRrrlesskppgdvdmsLSLLQEISALQEKLEAIHTDHQGEMtslkehfgaREEAFQKEIKALHTATEKLSKE 523
Cdd:pfam02463 245 LLRDEQEEI---------------ESSKQEIEKEEEKLAQVLKENKEEE---------KEKKLQEEELKLLAKEEEELKS 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 524 NESLRSKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGIGTDSAEFAELKTQIERLRLDYQHEIESLQSKQ 603
Cdd:pfam02463 301 ELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKK 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 604 DSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKAR--------LDSAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKYT 675
Cdd:pfam02463 381 LESERLSSAAKLKEEELELKSEEEKEAQLLLELARqledllkeEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKL 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 676 EQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLELETLRQQ-LEGAEKQIKNLETERNAESSKANSITKELQEKELVL 754
Cdd:pfam02463 461 LKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESkARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVEN 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 755 TGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEK 834
Cdd:pfam02463 541 YKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDK 620
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 835 DDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASfLQKSIGEVTLKAEQSQQQ 914
Cdd:pfam02463 621 RAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQEL-QEKAESELAKEEILRRQL 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 915 AARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDM 994
Cdd:pfam02463 700 EIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEE 779
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 995 EELKTQADKAKSLTYLLTSAKKEIEVMSEElrgLKSEKQLYAQEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSVN 1074
Cdd:pfam02463 780 REKTEKLKVEEEKEEKLKAQEEELRALEEE---LKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEEL 856
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1075 ETLHLEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEELLKMHMENDSLEASKVSMQVLIEELRFCKDKL 1154
Cdd:pfam02463 857 ERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEE 936
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1155 MAMSEKARAEKEHLEGQVKKLTAENLVLVKDKDD----VIQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDN 1230
Cdd:pfam02463 937 PEELLLEEADEKEKEENNKEEEEERNKRLLLAKEelgkVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETC 1016
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1082-1721 |
2.43e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 62.65 E-value: 2.43e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1082 ERVSEEKQVAEK----RYQQEHRDRESLVAEREKLLKEINAAQEELlkmhmendsleaskvsmqvlieelrfckDKLMAM 1157
Cdd:COG1196 203 EPLERQAEKAERyrelKEELKELEAELLLLKLRELEAELEELEAEL----------------------------EELEAE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1158 SEKARAEKEHLEGQVKKLTAEnlvlvkdkddvIQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKA 1237
Cdd:COG1196 255 LEELEAELAELEAELEELRLE-----------LEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEE 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1238 ERENLLQTNRDLQFEKDTLRQGQEKLSASLEAT-LQVKQLLSTEAETLRTQLDCASKALRKAELDMRQLQTSNSSLTKLL 1316
Cdd:COG1196 324 ELAELEEELEELEEELEELEEELEEAEEELEEAeAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1317 EEIKTCRAITDsECIQLLHEKESLAASERTLLAEKEELLSENRIITEKLSKQSEEVARLEMGLNEKITYLTSEKEVACQK 1396
Cdd:COG1196 404 ELEEAEEALLE-RLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAEL 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1397 VAKLKKQQDSLLKEKSALELQNGDLLADREssIKTIGDLRRKYDQEATNRRIVMQEKMKLLGNIDALKKELQERkkenqe 1476
Cdd:COG1196 483 LEELAEAAARLLLLLEAEADYEGFLEGVKA--ALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVE------ 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1477 ltsskcDLSLLLKEAQDAKKNLEKEHTSMIQAKdnlnaelktccceknMLLRDGLNLQEECQKLNEEIREIQQTLILEKE 1556
Cdd:COG1196 555 ------DDEVAAAAIEYLKAAKAGRATFLPLDK---------------IRARAALAAALARGAIGAAVDLVASDLREADA 613
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1557 ARAKESETSL---YENNKLHGRVVLLEEEIQRLRVCSEQLQTENFTLTQEKTNSEQKVEEIIKEKELLSAETAQLAANIE 1633
Cdd:COG1196 614 RYYVLGDTLLgrtLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEEL 693
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1634 TLKSDFAALSKSKLELQELhscltkiLDDLRLNHEVALTERAEVLQDNKNLLAEKREMMLRNEEALKEKEKLEESYFILQ 1713
Cdd:COG1196 694 ELEEALLAEEEEERELAEA-------EEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELE 766
|
....*...
gi 1720414365 1714 KEISQLAQ 1721
Cdd:COG1196 767 RELERLER 774
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
744-1808 |
2.59e-09 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 62.89 E-value: 2.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 744 TKELQEK-ELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLH-------QKEEQFNVLSS 815
Cdd:pfam01576 17 VKERQQKaESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHelesrleEEEERSQQLQN 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 816 ELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENAS 895
Cdd:pfam01576 97 EKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERISEFTSNLAEEEEKAK 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 896 FLQK---------SIGEVTLKAEQSQQQAARKHEEEKKELEEKLLElekkmetsynQCQDLKAKYEKASSETKTKHEEiL 966
Cdd:pfam01576 177 SLSKlknkheamiSDLEERLKKEEKGRQELEKAKRKLEGESTDLQE----------QIAELQAQIAELRAQLAKKEEE-L 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 967 QNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKSLTyllTSAKKEIEVMSEELRGLKSEKQ------LYAQEAN 1040
Cdd:pfam01576 246 QAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAAR---NKAEKQRRDLGEELEALKTELEdtldttAAQQELR 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1041 ALKLEKGSLLSKLIEVETKI--TLLQEDQQKLWSVNETLHLEKERVSEEKQVAEKryqqehrDRESLVAEREKLLKEINA 1118
Cdd:pfam01576 323 SKREQEVTELKKALEEETRSheAQLQEMRQKHTQALEELTEQLEQAKRNKANLEK-------AKQALESENAELQAELRT 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1119 AQEELLKMHMENDSLEASKVSMQVLIEELRFCKDKLMAMSEKARAEKEHLEGQVKKLTAENLVLVKDKDDVIQKLQSAYE 1198
Cdd:pfam01576 396 LQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQE 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1199 ELVKDQKALVQeiedLTTEKKSAAEKQMSLDNTCLTLKAERENLLQTNRDLQFEKDTLRQGQEKLSASLEATLQVKQLLS 1278
Cdd:pfam01576 476 LLQEETRQKLN----LSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQ 551
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1279 TEAETLRTQLDCASKALRKAELDMRQLQTSNSSLTklleeiktcraitdsecIQLLHEKESLAASERTlLAEKEELLSEN 1358
Cdd:pfam01576 552 RELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLL-----------------VDLDHQRQLVSNLEKK-QKKFDQMLAEE 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1359 RIITeklSKQSEEVARLEMGLNEKITyltsekevacqKVAKLKKQQDSLLKEKSALELQNGDLLADRESSIKTIGDL--- 1435
Cdd:pfam01576 614 KAIS---ARYAEERDRAEAEAREKET-----------RALSLARALEEALEAKEELERTNKQLRAEMEDLVSSKDDVgkn 679
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1436 -------RRKYDQEATNRRIVMQE-----------KMKLLGNIDALK----KELQERKKENQEltsskcDLSLLLKEAQD 1493
Cdd:pfam01576 680 vhelersKRALEQQVEEMKTQLEEledelqatedaKLRLEVNMQALKaqfeRDLQARDEQGEE------KRRQLVKQVRE 753
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1494 AKKNLEKEHTSMIQA---KDNLNAELKTCCCEKNMLLRDGLNLQEECQKLNEEIREIQQTLILEKEAR------AKESET 1564
Cdd:pfam01576 754 LEAELEDERKQRAQAvaaKKKLELDLKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEARASRdeilaqSKESEK 833
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1565 SLyenNKLHGRVVLLEEEIQRLRVCSEQLQTENFTLTQEKTNSEQKVEEIIKEKELLSAETAQLAANIETLKSDFAALSK 1644
Cdd:pfam01576 834 KL---KNLEAELLQLQEDLAASERARRQAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTELLND 910
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1645 SKLELQELHSCLTKILDDLRLNHEVALTERAEVLQDNKNLLAEKREMmlrnEEALKEKEKLEESYFilqkeISQLAQTNS 1724
Cdd:pfam01576 911 RLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKLQEM----EGTVKSKFKSSIAAL-----EAKIAQLEE 981
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1725 HISANLLESQSENRTLRKDKSKL--TLKIRELETLHSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELD 1802
Cdd:pfam01576 982 QLEQESRERQAANKLVRRTEKKLkeVLLQVEDERRHADQYKDQAEKGNSRMKQLKRQLEEAEEEASRANAARRKLQRELD 1061
|
....*.
gi 1720414365 1803 TLKENN 1808
Cdd:pfam01576 1062 DATESN 1067
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1190-1780 |
4.73e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 61.62 E-value: 4.73e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1190 IQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEkqmsLDNTCLTLKAERENLLQTNRDLQFEKDTLRQGQEKLSASLEA 1269
Cdd:PRK03918 157 LDDYENAYKNLGEVIKEIKRRIERLEKFIKRTEN----IEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKE 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1270 TLQVKQLLsteaETLRTQLDCASKALRKAELDMRQLQTSNSSLTKLLEEIKtcraitdsECIQLLHEKESLAASERTLLA 1349
Cdd:PRK03918 233 LEELKEEI----EELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELE--------EKVKELKELKEKAEEYIKLSE 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1350 EKEELLSENRIITEKLSKQSEEVArlemGLNEKITYLTSEKEvacqKVAKLKKQQDSLLKEKSALE-----LQNGDLLAD 1424
Cdd:PRK03918 301 FYEEYLDELREIEKRLSRLEEEIN----GIEERIKELEEKEE----RLEELKKKLKELEKRLEELEerhelYEEAKAKKE 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1425 RESSIK------TIGDLRRKYDQEATNRRIVMQEKMKLLGNIDALKKELQERKKENQELTSSK-----CDLSL------- 1486
Cdd:PRK03918 373 ELERLKkrltglTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKgkcpvCGRELteehrke 452
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1487 LLKEAQDAKKNLEKEHTSMIQAKDNLNAELKTccCEKNMLLRDGLNLQEECQKLNEEIREIQQTLILEK-EARAKESETS 1565
Cdd:PRK03918 453 LLEEYTAELKRIEKELKEIEEKERKLRKELRE--LEKVLKKESELIKLKELAEQLKELEEKLKKYNLEElEKKAEEYEKL 530
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1566 LYENNKLHGRVVLLEEEIQRLrvcsEQLQTENFTLTQEKTNSEQKVEEIIKEKELLSAET-AQLAANIETLKS---DFAA 1641
Cdd:PRK03918 531 KEKLIKLKGEIKSLKKELEKL----EELKKKLAELEKKLDELEEELAELLKELEELGFESvEELEERLKELEPfynEYLE 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1642 LSKSKLELQELHscltKILDDLRLNHEVALTERAEVLQDNKNLLAEKREMMLR-----NEEALKEKEKLEESYFILQKEI 1716
Cdd:PRK03918 607 LKDAEKELEREE----KELKKLEEELDKAFEELAETEKRLEELRKELEELEKKyseeeYEELREEYLELSRELAGLRAEL 682
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414365 1717 SQLAQTNSHISANLLESQSENRTLRKDKSKLTL-------------KIRELETLHSFTA-AQTAEDAMQIMEQMTKEK 1780
Cdd:PRK03918 683 EELEKRREEIKKTLEKLKEELEEREKAKKELEKlekalerveelreKVKKYKALLKERAlSKVGEIASEIFEELTEGK 760
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1317-2030 |
5.24e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.08 E-value: 5.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1317 EEIKTCRAITDSECIQLLHEKESLAASERTLLAEKEELLSENRIITEKLSKQSEEVARLEMGLNE-----KITYLTSEKE 1391
Cdd:PTZ00121 1246 EEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKaeeakKADEAKKKAE 1325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1392 VACQKVAKLKKQQDSLlKEKSALELQNGDLLADRESSIKTIGDLRRKYDQEATNRRIVMQEKMKLLGNIDALKKELQERK 1471
Cdd:PTZ00121 1326 EAKKKADAAKKKAEEA-KKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDK 1404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1472 KENQELTSSKCDLslllKEAQDAKKNLEKEHTSmiqakdnlnAELKTCCCEKNMllrdglnlQEECQKLNEEIREIQQTL 1551
Cdd:PTZ00121 1405 KKADELKKAAAAK----KKADEAKKKAEEKKKA---------DEAKKKAEEAKK--------ADEAKKKAEEAKKAEEAK 1463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1552 ILEKEARAKESETSLYENNKlhgRVVLLEEEIQRLRVCSEQLQtenftltqEKTNSEQKVEEIIKEKELLSAETAQLAAn 1631
Cdd:PTZ00121 1464 KKAEEAKKADEAKKKAEEAK---KADEAKKKAEEAKKKADEAK--------KAAEAKKKADEAKKAEEAKKADEAKKAE- 1531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1632 iETLKSDFAALSKSKLELQELhscltKILDDLRLNHEVALTERAEVLQDNKNLLAEKREMMLRNEEA-LKEKEKLEESYF 1710
Cdd:PTZ00121 1532 -EAKKADEAKKAEEKKKADEL-----KKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEArIEEVMKLYEEEK 1605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1711 ILQKEISQLAQTNSHISANLLESQSENRTLRKDKSKLTLKIRELETLHSFTAAQTAEDA-MQIMEQMTKEKTETLASLED 1789
Cdd:PTZ00121 1606 KMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAeEAKKAEEDKKKAEEAKKAEE 1685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1790 TKQTNArlqnELDTLKENNLKTVEELNKSKEllsVENQKMEEFKKEIETLKQaaaqKSQQLSALQEENVKLAEELGRTRD 1869
Cdd:PTZ00121 1686 DEKKAA----EALKKEAEEAKKAEELKKKEA---EEKKKAEELKKAEEENKI----KAEEAKKEAEEDKKKAEEAKKDEE 1754
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1870 EVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESEFRKDADEEKASlqKSISLTSALLTEKDAELEKLRNEVTVLRGENA 1949
Cdd:PTZ00121 1755 EKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKI--KDIFDNFANIIEGGKEGNLVINDSKEMEDSAI 1832
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1950 TAKSLHSVVQTLESDKVKlelkvknlelQLKENKRQLSSSSGNTDAQA-------EEDERAQESQQMIDFLNSVIVDLQR 2022
Cdd:PTZ00121 1833 KEVADSKNMQLEEADAFE----------KHKFNKNNENGEDGNKEADFnkekdlkEDDEEEIEEADEIEKIDKDDIEREI 1902
|
....*...
gi 1720414365 2023 KNQDLKMK 2030
Cdd:PTZ00121 1903 PNNNMAGK 1910
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
338-913 |
5.37e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 61.59 E-value: 5.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 338 ELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEeesitkgDLETQTKLEHARTKELEQSLLFEKTKADKLQ 417
Cdd:PRK02224 255 TLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERD-------DLLAEAGLDDADAEAVEARREELEDRDEELR 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 418 RELEDTRV---ATVSEKSRIMELEKDLALRAQEVAELRRRLESskppgDVDMSLSLLQEISALQEKLEAihtdhqgEMTS 494
Cdd:PRK02224 328 DRLEECRVaaqAHNEEAESLREDADDLEERAEELREEAAELES-----ELEEAREAVEDRREEIEELEE-------EIEE 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 495 LKEHFGAREEAFqkeikalhtatEKLSKENESLRSKLDHANKENSDVIALWKSkLETAIASHQQAMEELKVSfskgigtd 574
Cdd:PRK02224 396 LRERFGDAPVDL-----------GNAEDFLEELREERDELREREAELEATLRT-ARERVEEAEALLEAGKCP-------- 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 575 saefaelktqierlrldyqheiESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDqhLVEMEDTL 654
Cdd:PRK02224 456 ----------------------ECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAED--LVEAEDRI 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 655 NKLQEaeiKVKELEVLQAKYTEQSEvignftsqlsavkEKLLDLDALRKAnsegKLELETlrqqlEGAEKQIKNLETERN 734
Cdd:PRK02224 512 ERLEE---RREDLEELIAERRETIE-------------EKRERAEELRER----AAELEA-----EAEEKREAAAEAEEE 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 735 AEssKANSITKELQEKELVLTGLQDSLNQVNQV---KETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFN 811
Cdd:PRK02224 567 AE--EAREEVAELNSKLAELKERIESLERIRTLlaaIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFD 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 812 -----VLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEImkmsgdnssqltkmnDELRLKERSVEELQLK 886
Cdd:PRK02224 645 earieEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEEL---------------EELRERREALENRVEA 709
|
570 580
....*....|....*....|....*..
gi 1720414365 887 LTKANENASFLQKSIGEvtLKAEQSQQ 913
Cdd:PRK02224 710 LEALYDEAEELESMYGD--LRAELRQR 734
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
360-898 |
2.63e-08 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 59.35 E-value: 2.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 360 LLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARTKELEQsllfektKADKLQRELEDTRVATVSEKSRIMELEK 439
Cdd:pfam05483 245 LLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIE-------KKDHLTKELEDIKMSLQRSMSTQKALEE 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 440 DLALRAQEVAELRRRLESSkppgdvdmslslLQEISALQEKLEAIHTDHQGEMTSLKEHFGAREEAFQKEIKALHTATEK 519
Cdd:pfam05483 318 DLQIATKTICQLTEEKEAQ------------MEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITME 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 520 LSKENESLRSKLDHANKENSDVIAL-----WKSKLETAIASHQQAMEELKVSFSKGIG---TDSAEFAELKTQIERLRLD 591
Cdd:pfam05483 386 LQKKSSELEEMTKFKNNKEVELEELkkilaEDEKLLDEKKQFEKIAEELKGKEQELIFllqAREKEIHDLEIQLTAIKTS 465
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 592 YQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQhlvemEDTLNKLQEAEIKVKELEVLQ 671
Cdd:pfam05483 466 EEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQ-----EDIINCKKQEERMLKQIENLE 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 672 AKYT----EQSEVIGNFTSQLSAVKEKL---------LDLDALRKANSEGKLELE--TLRQQLEGAEKQIKNLETERNAE 736
Cdd:pfam05483 541 EKEMnlrdELESVREEFIQKGDEVKCKLdkseenarsIEYEVLKKEKQMKILENKcnNLKKQIENKNKNIEELHQENKAL 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 737 SSKANSITKELQEKELVLTGLQDSLNQVNQ----VKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNV 812
Cdd:pfam05483 621 KKKGSAENKQLNAYEIKVNKLELELASAKQkfeeIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQH 700
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 813 LSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDN-SSQLTKMNDELRLKERSVEELQLkltKAN 891
Cdd:pfam05483 701 KIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEIELSNiKAELLSLKKQLEIEKEEKEKLKM---EAK 777
|
....*..
gi 1720414365 892 ENASFLQ 898
Cdd:pfam05483 778 ENTAILK 784
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1364-1896 |
3.64e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 58.88 E-value: 3.64e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1364 KLSKQSEEVARLEMGLNEKITYLTSEKEVACQKVAKLKKQQDSLLKEKSALELQngdlLADRESSIKTIGDLRRKYDQEA 1443
Cdd:TIGR04523 128 KLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKE----KLNIQKNIDKIKNKLLKLELLL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1444 TNRRIVMQEKMKLLGNIDALKKELQERKKENQELTSSKCDLSLLLKEAQDAKKNLEKEHTSMIQAKDNLNAELKTCCCEK 1523
Cdd:TIGR04523 204 SNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1524 NMLLRDGLNLQEECQKLN----EEIREIQQTLILEKEARAKESETSLYENNKlhgRVVLLEEEIQRLRVCSEQLQTENFT 1599
Cdd:TIGR04523 284 KELEKQLNQLKSEISDLNnqkeQDWNKELKSELKNQEKKLEEIQNQISQNNK---IISQLNEQISQLKKELTNSESENSE 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1600 LTQEKTNSEQKVEEIIKEKELLSAETAQLAANIETLKSDFAALSKSKLELQELHSCLTKILDDLRLNHEVALTERAEVLQ 1679
Cdd:TIGR04523 361 KQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNS 440
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1680 DNKNLLAEKREMMLRNEEALKEKEKLEESYFILQKEISQLAQTNSHISANLLESQSENRTLRKDKSKLTLKIRELETLHS 1759
Cdd:TIGR04523 441 EIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKIS 520
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1760 F--TAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNA------RLQNELDTLKENNLKTVEELNKSKELLSVENQKMEE 1831
Cdd:TIGR04523 521 SlkEKIEKLESEKKEKESKISDLEDELNKDDFELKKENlekeidEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKD 600
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720414365 1832 FKKEIETLKQAAAQKSQQLSALQEENVKLAEELgrtRDEVTSHQKLEEERSVLNNQLLEMKKSLP 1896
Cdd:TIGR04523 601 LIKEIEEKEKKISSLEKELEKAKKENEKLSSII---KNIKSKKNKLKQEVKQIKETIKEIRNKWP 662
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
969-1551 |
5.23e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 58.59 E-value: 5.23e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 969 LQKMLADTEDKLKAAQEANRDLMQDM-----EELKTQADKAKSLTYLLTSAKKEIEVMSEELRglkSEKQLYAQEANALK 1043
Cdd:pfam15921 247 LEALKSESQNKIELLLQQHQDRIEQLiseheVEITGLTEKASSARSQANSIQSQLEIIQEQAR---NQNSMYMRQLSDLE 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1044 LEKGSLLSKLIEVETkitlLQEDQQKlwsvnetlHLEKERVSEEKQVAEKRYQQEHRDRES--LVAEREKLLKEINAAQE 1121
Cdd:pfam15921 324 STVSQLRSELREAKR----MYEDKIE--------ELEKQLVLANSELTEARTERDQFSQESgnLDDQLQKLLADLHKREK 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1122 ELLKMHMENDSLEASKVSMQVLIEELRFCKDKLMAMSEKARAEKEHLEGQVKKLTAENLVLVKDKDDVIQKLQSAYEELV 1201
Cdd:pfam15921 392 ELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1202 KDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENLLQTNRDLQfekdtlrqgqeKLSASLEATLQVKQLLSTEA 1281
Cdd:pfam15921 472 STKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEIT-----------KLRSRVDLKLQELQHLKNEG 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1282 ETLR-TQLDCASKALRKAELD--MRQLQTSNSSLTKLLEEIKTCRAITDSECIQLlhEKEslaASERTLLAEKEELLSEN 1358
Cdd:pfam15921 541 DHLRnVQTECEALKLQMAEKDkvIEILRQQIENMTQLVGQHGRTAGAMQVEKAQL--EKE---INDRRLELQEFKILKDK 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1359 RiiTEKLSKQSEEVARLEMglnEKITYLTSEKEvACQKVAKLKKQQDSLLKEKSALELQNGDLLADRESSIKtigDLRRK 1438
Cdd:pfam15921 616 K--DAKIRELEARVSDLEL---EKVKLVNAGSE-RLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKR---NFRNK 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1439 YDQ-EATNRRIVMQEKmKLLGNIDALKKELQERKKEN-----------QELTSSKCDLSLLLKEAQ---DAKKNLEKEHT 1503
Cdd:pfam15921 687 SEEmETTTNKLKMQLK-SAQSELEQTRNTLKSMEGSDghamkvamgmqKQITAKRGQIDALQSKIQfleEAMTNANKEKH 765
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 1720414365 1504 SMIQAKDNLNAELKTCCCEKNMLLRDGLNLQEECQKLNEEIREIQQTL 1551
Cdd:pfam15921 766 FLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVAL 813
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
582-1178 |
7.41e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 57.74 E-value: 7.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 582 KTQIERLRLDYQHEIESLQS----KQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQhLVEMEDTLNKL 657
Cdd:PRK02224 175 RLGVERVLSDQRGSLDQLKAqieeKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEV-LEEHEERREEL 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 658 QEAEikvKELEVLQAKYTEqsevignftsqlsAVKEKlldlDALRKansegklELETLRQQLEGAEKQIKNLETERNAES 737
Cdd:PRK02224 254 ETLE---AEIEDLRETIAE-------------TERER----EELAE-------EVRDLRERLEELEEERDDLLAEAGLDD 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 738 SKANSITKELQEKELVLTGLQDSLNQV-------NQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQF 810
Cdd:PRK02224 307 ADAEAVEARREELEDRDEELRDRLEECrvaaqahNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEI 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 811 NVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAeimkmsgdnssqltkmndELRLKERSVEElqlkltKA 890
Cdd:PRK02224 387 EELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREA------------------ELEATLRTARE------RV 442
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 891 NENASFLqksigEVTLKAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKT-----KHEEI 965
Cdd:PRK02224 443 EEAEALL-----EAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAedrieRLEER 517
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 966 LQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKSLTyllTSAKKEIEVMSEELRGLKSEKQLYAQEANAL-KL 1044
Cdd:PRK02224 518 REDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAA---AEAEEEAEEAREEVAELNSKLAELKERIESLeRI 594
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1045 EkgSLLSKLIEVETKITLLQEDQQKLWSVN----ETLHLEKERVSE-EKQVAEKRYQQEHRDRESLVAEREKLLKEINAA 1119
Cdd:PRK02224 595 R--TLLAAIADAEDEIERLREKREALAELNderrERLAEKRERKRElEAEFDEARIEEAREDKERAEEYLEQVEEKLDEL 672
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720414365 1120 QEellkmhmENDSLEASKVSMQVLIEELRFCKDKLMAMSEKARA------EKEHLEGQVKKLTAE 1178
Cdd:PRK02224 673 RE-------ERDDLQAEIGAVENELEELEELRERREALENRVEAlealydEAEELESMYGDLRAE 730
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
702-1456 |
7.46e-08 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 58.06 E-value: 7.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 702 RKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTglqdslnqvnQVKETLEKELQTLKEk 781
Cdd:TIGR00618 165 KKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYH----------ERKQVLEKELKHLRE- 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 782 fastseeavsAQTRMQDTVNKLHQKEEQFNvlssELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLEND-----IAEIM 856
Cdd:TIGR00618 234 ----------ALQQTQQSHAYLTQKREAQE----EQLKKQQLLKQLRARIEELRAQEAVLEETQERINRArkaapLAAHI 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 857 KMSGDNSSQLTKMNDELRLKERSVE-ELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLELEK 935
Cdd:TIGR00618 300 KAVTQIEQQAQRIHTELQSKMRSRAkLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQ 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 936 KMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMLADTEDKLK-AAQEANRDLMQDMEELKTQAdkaksLTYLLTSA 1014
Cdd:TIGR00618 380 HIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQlAHAKKQQELQQRYAELCAAA-----ITCTAQCE 454
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1015 KKEIEVMSEELRGLKSEKQLYAQEANALKLEKgsllSKLIEVETKITLLQEDQQKLwsVNETLHLEKERV-SEEKQVAEK 1093
Cdd:TIGR00618 455 KLEKIHLQESAQSLKEREQQLQTKEQIHLQET----RKKAVVLARLLELQEEPCPL--CGSCIHPNPARQdIDNPGPLTR 528
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1094 RYQQEHRDRESLVAEREKLLKEINAAQEELLKMHMENDSLEASKVSMQVLIEELRFCKDKLMAMSEKARAEKEHLEGQVK 1173
Cdd:TIGR00618 529 RMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAED 608
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1174 KLTAENLVLVK------DKDDVIQKLQSAYEELVKDQKALVQEIEDLTTEKKSaaEKQMSLDNTCLTLKAERENLLQT-- 1245
Cdd:TIGR00618 609 MLACEQHALLRklqpeqDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVR--EHALSIRVLPKELLASRQLALQKmq 686
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1246 --NRDLQFEKDTLRQGQEKLSASLEATL-------QVKQLLSTEAETLRTQLDCASKALRKAELDMR---QLQTSNSSLT 1313
Cdd:TIGR00618 687 seKEQLTYWKEMLAQCQTLLRELETHIEeydrefnEIENASSSLGSDLAAREDALNQSLKELMHQARtvlKARTEAHFNN 766
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1314 KLLEEIKTCRAITDSECIQLLHEKESLAASERTLLAEKEELLSENR--IITEKLSKQSEEVARLEMGLN--EKITYLTSE 1389
Cdd:TIGR00618 767 NEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIpsDEDILNLQCETLVQEEEQFLSrlEEKSATLGE 846
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720414365 1390 KEVACQKVAKLKKQQDSLLKEKSALELQNGDLLADRESSIKTIGDLRRKYDQEATNRRIVMQEKMKL 1456
Cdd:TIGR00618 847 ITHQLLKYEECSKQLAQLTQEQAKIIQLSDKLNGINQIKIQFDGDALIKFLHEITLYANVRLANQSE 913
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
769-1298 |
9.65e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 57.62 E-value: 9.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 769 ETLEkELQTLKEKFASTSEEAvsAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKL 848
Cdd:COG4913 252 ELLE-PIRELAERYAAARERL--AELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDEL 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 849 ENDIAEImkmSGDNSSQLtkmndelrlkERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEE 928
Cdd:COG4913 329 EAQIRGN---GGDRLEQL----------EREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEA 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 929 KLLELEKKMETSYnqcqDLKAKYEKASSETKTKHEEIL----------QNLQKMLADTEDKLKAAQEANR---DLMQDME 995
Cdd:COG4913 396 LEEELEALEEALA----EAEAALRDLRRELRELEAEIAslerrksnipARLLALRDALAEALGLDEAELPfvgELIEVRP 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 996 E-----------LKTQAdkakslTYLLTSAKKEIEV--------MSEELRGLKSEKQLyaQEANALKLEKGSLLSKLIEV 1056
Cdd:COG4913 472 EeerwrgaiervLGGFA------LTLLVPPEHYAAAlrwvnrlhLRGRLVYERVRTGL--PDPERPRLDPDSLAGKLDFK 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1057 ETKIT--LLQE--DQQKLWSVN--ETLHLEKERVSEEKQVAEKRYQQEHRDR-----------------ESLVAEREKLL 1113
Cdd:COG4913 544 PHPFRawLEAElgRRFDYVCVDspEELRRHPRAITRAGQVKGNGTRHEKDDRrrirsryvlgfdnraklAALEAELAELE 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1114 KEINAAQEELLKMHMENDSLEASKVSMQVLiEELRFCKDKLMAmsekARAEKEHLEGQVKKLTAENlvlvkdkdDVIQKL 1193
Cdd:COG4913 624 EELAEAEERLEALEAELDALQERREALQRL-AEYSWDEIDVAS----AEREIAELEAELERLDASS--------DDLAAL 690
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1194 QSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENLLQTNRDLQFEKDTLRQGQEKLSASLEatlQV 1273
Cdd:COG4913 691 EEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVER---EL 767
|
570 580
....*....|....*....|....*
gi 1720414365 1274 KQLLSTEAETLRTQLDCASKALRKA 1298
Cdd:COG4913 768 RENLEERIDALRARLNRAEEELERA 792
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
336-1129 |
1.31e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 57.29 E-value: 1.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 336 VLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDL----ETQTKLEHARTKELEQSLLFEKT 411
Cdd:pfam02463 221 LEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKEnkeeEKEKKLQEEELKLLAKEEEELKS 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 412 KADKLQRELEDTRVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKPPGDVDmsLSLLQEISALQEKLEAIHTDHQGE 491
Cdd:pfam02463 301 ELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAE--EEEEEELEKLQEKLEQLEEELLAK 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 492 MTSLKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHA----NKENSDVIALWKSKLETAIASHQQAMEELKVSF 567
Cdd:pfam02463 379 KKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLkeekKEELEILEEEEESIELKQGKLTEEKEELEKQEL 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 568 SKGIGTDSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKAR--------- 638
Cdd:pfam02463 459 KLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGrlgdlgvav 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 639 -LDSAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLELETLRQ 717
Cdd:pfam02463 539 eNYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADED 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 718 QLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQ 797
Cdd:pfam02463 619 DKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQ 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 798 DTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIaeimKMSGDNSSQLTKMNDELRLKE 877
Cdd:pfam02463 699 LEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEE----KSRLKKEEKEEEKSELSLKEK 774
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 878 RSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSE 957
Cdd:pfam02463 775 ELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEE 854
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 958 TKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKSLTYLLTSAKKEIEVMSEELRGLKSEKQLyaQ 1037
Cdd:pfam02463 855 ELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILL--K 932
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1038 EANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSVNETLHLEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEIN 1117
Cdd:pfam02463 933 YEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAII 1012
|
810
....*....|..
gi 1720414365 1118 AAQEELLKMHME 1129
Cdd:pfam02463 1013 EETCQRLKEFLE 1024
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
2103-2119 |
1.54e-07 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 49.00 E-value: 1.54e-07
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
677-895 |
1.62e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.93 E-value: 1.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 677 QSEVIGNFTSQLSAVKEKLL----DLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKEL 752
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAelekELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 753 VLTGLQDSLNQVNQvkeTLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFK 832
Cdd:COG4942 98 ELEAQKEELAELLR---ALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720414365 833 EKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENAS 895
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
872-1709 |
2.06e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 56.52 E-value: 2.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 872 ELRLKERSVEELqLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKheeekkeLEEKLLELEKKMETSYNQCQDLKAKY 951
Cdd:pfam02463 164 GSRLKRKKKEAL-KKLIEETENLAELIIDLEELKLQELKLKEQAKKA-------LEYYQLKEKLELEEEYLLYLDYLKLN 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 952 EKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKSLTylltsakKEIEVMSEELRGLKSE 1031
Cdd:pfam02463 236 EERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLA-------KEEEELKSELLKLERR 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1032 KQLYAQEANALKLEKGSLLSKLIEVETKITllqEDQQKLWSVNETLHLEKERVSEEKQVAEKRYQQEHRDRESLVAEREK 1111
Cdd:pfam02463 309 KVDDEEKLKESEKEKKKAEKELKKEKEEIE---ELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESER 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1112 LLKEINAAQEELLKMHMENDSLEASKVSMQVLIEELRFCKDKLMAMSEKARAEKEHLEGQVKKL-TAENLVLVKDKDDVI 1190
Cdd:pfam02463 386 LSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEkEELEKQELKLLKDEL 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1191 QKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENLLQTNRDLQFEKDTLRQGQEKLSASLEAT 1270
Cdd:pfam02463 466 ELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAI 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1271 LQVKQLLSTEAETLRTQLDCASKALRKAELDMRQLQTSNSSLTKLLEEIKTCRAITDSECIQlLHEKESLAASERTLLAE 1350
Cdd:pfam02463 546 STAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQ-LDKATLEADEDDKRAKV 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1351 KEELLSENRIITEKLSK-----QSEEVARLEMGLNEKITYLTSEKEVACQKVAKLKKQQDSLLKEKSALELQNGDLLADR 1425
Cdd:pfam02463 625 VEGILKDTELTKLKESAkakesGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKK 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1426 ESSIKTIgdLRRKYDQEATNRRIVMQEKMKLLGNIDALKKELQERKKENQELTSSK------CDLSLLLKEAQDAKKNLE 1499
Cdd:pfam02463 705 EQREKEE--LKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKkeekeeEKSELSLKEKELAEEREK 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1500 KEHTSMIQAKDNLNAELKTCCCEKNMLLRDGLNLQEECQKLNEEIREIQQTLILEKEARAKESETSLYENNKLHGRVV-L 1578
Cdd:pfam02463 783 TEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEeE 862
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1579 LEEEIQRLRVCSEQLQTENFTLTQEKTNSEQKVEEIIKEKELLSAETAQLAANIETLKSDFAalsKSKLELQELHSCLTK 1658
Cdd:pfam02463 863 ITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIK---EEAEILLKYEEEPEE 939
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|.
gi 1720414365 1659 ILDDLRLNHEVALTERAEVLQDNKNLLAEKREMMLRNEEALKEKEKLEESY 1709
Cdd:pfam02463 940 LLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERY 990
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
613-1066 |
2.17e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 56.18 E-value: 2.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 613 EMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQhlveMEDTLNKLQEAeikVKELEVLQAKYTEQSEVIGNFTSQLSAVK 692
Cdd:TIGR04523 222 ELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQ----LNQLKDEQNKI---KKQLSEKQKELEQNNKKIKELEKQLNQLK 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 693 EKLLDLDALRKAN--SEGKLELETLRQQLEGAEKQ--------------IKNLETERNAESSKANSITKELQEKELVLTG 756
Cdd:TIGR04523 295 SEISDLNNQKEQDwnKELKSELKNQEKKLEEIQNQisqnnkiisqlneqISQLKKELTNSESENSEKQRELEEKQNEIEK 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 757 LQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDD 836
Cdd:TIGR04523 375 LKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 837 REDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAA 916
Cdd:TIGR04523 455 IIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKK 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 917 RKHEeekkeleekllelekkmETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKmLADTEDKLKAAQEANRDLMQDME- 995
Cdd:TIGR04523 535 EKES-----------------KISDLEDELNKDDFELKKENLEKEIDEKNKEIEE-LKQTQKSLKKKQEEKQELIDQKEk 596
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414365 996 -------ELKTQADKAKSLTYLLTSAKKEIEVMSEELRGLKSEKQLYAQEANALKLEKGSLLSKLIEVETKITLLQED 1066
Cdd:TIGR04523 597 ekkdlikEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTK 674
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
338-1031 |
2.86e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 56.23 E-value: 2.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 338 ELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARTKELEQSLLFEKTKADKLQ 417
Cdd:TIGR02169 319 DAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLK 398
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 418 RELEDTRvatvSEKSRIMELEKDLALRAQEVAELRRRLESSKPPGDVDMsLSLLQEISALQEKLEAIHTDhqgemtslke 497
Cdd:TIGR02169 399 REINELK----RELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEK-EDKALEIKKQEWKLEQLAAD---------- 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 498 hfgarEEAFQKEIKALHTATEKLSKENESLRSKLDHANKEnsdvialwKSKLETAIASHQQAMEELKVSFSKGIGT---- 573
Cdd:TIGR02169 464 -----LSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQ--------ARASEERVRGGRAVEEVLKASIQGVHGTvaql 530
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 574 -----------DSAEFAELKTQIERLRLDYQHEIESLQSKQ-------------DSERSAHAKEMETMQAKLMKIIkEKE 629
Cdd:TIGR02169 531 gsvgeryataiEVAAGNRLNNVVVEDDAVAKEAIELLKRRKagratflplnkmrDERRDLSILSEDGVIGFAVDLV-EFD 609
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 630 DSLEAVKA----------RLDSAEDQ----HLVEME-DTLNK---LQEAEIKVKELEVLQAKYTEQSEvignftsQLSAV 691
Cdd:TIGR02169 610 PKYEPAFKyvfgdtlvveDIEAARRLmgkyRMVTLEgELFEKsgaMTGGSRAPRGGILFSRSEPAELQ-------RLRER 682
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 692 KEKL-LDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKET 770
Cdd:TIGR02169 683 LEGLkRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKE 762
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 771 LEKELQTLKEKFASTSEEAVSAQTRMQDTvnKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLEN 850
Cdd:TIGR02169 763 LEARIEELEEDLHKLEEALNDLEARLSHS--RIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQE 840
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 851 DIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEvtLKAEQSQQQaaRKHEEEKKELEEKL 930
Cdd:TIGR02169 841 QRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDE--LEAQLRELE--RKIEELEAQIEKKR 916
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 931 LELEKKMETSYNQCQDLKAkYEKASSETKTKHEEI--LQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKSLT 1008
Cdd:TIGR02169 917 KRLSELKAKLEALEEELSE-IEDPKGEDEEIPEEElsLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKR 995
|
730 740
....*....|....*....|...
gi 1720414365 1009 YLLTSAKKEIEVMSEELRGLKSE 1031
Cdd:TIGR02169 996 AKLEEERKAILERIEEYEKKKRE 1018
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1685-2061 |
3.49e-07 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 55.85 E-value: 3.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1685 LAEKREMMLRNEEALKEKEKLEESYFILQkeiSQLAQTNSHISANLLESQSENRTLRKDKSKLTLKIRELETLHSFTAAq 1764
Cdd:COG5022 805 LLGSRKEYRSYLACIIKLQKTIKREKKLR---ETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQRVELA- 880
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1765 taedamqimEQMTKEKTETLASLEDTKQTNARLQNEL---------DTLKENNLKTvEELNKSKELL---SVENQKMEEF 1832
Cdd:COG5022 881 ---------ERQLQELKIDVKSISSLKLVNLELESEIielkkslssDLIENLEFKT-ELIARLKKLLnniDLEEGPSIEY 950
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1833 KK-----EIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLR------ 1901
Cdd:COG5022 951 VKlpelnKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEvaelqs 1030
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1902 ESEFRKDADEEKASLQKSISLTSALLtekdAELEKLRNEVTVLRGENATAKSLHSVVQTLESDKVKL-ELKVKNLELqlk 1980
Cdd:COG5022 1031 ASKIISSESTELSILKPLQKLKGLLL----LENNQLQARYKALKLRRENSLLDDKQLYQLESTENLLkTINVKDLEV--- 1103
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1981 eNKRQLSSSSGNTDAQAEEDERAQESQQMIDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGEDLNSYDSDDQEKQSKK 2060
Cdd:COG5022 1104 -TNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPFAALSEKRL 1182
|
.
gi 1720414365 2061 K 2061
Cdd:COG5022 1183 Y 1183
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1276-1842 |
4.30e-07 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 55.13 E-value: 4.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1276 LLSTEAETLRTQLDCASKalRKAELDMRqlqtsnsslTKLLEEIKTCRAITDSECIQLLHEKESLAASERTLLAEKEELL 1355
Cdd:pfam05557 31 ELEKKASALKRQLDRESD--RNQELQKR---------IRLLEKREAEAEEALREQAELNRLKKKYLEALNKKLNEKESQL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1356 SENRIITEKLSKQSEEVARLEMGLNEKITYLTSEKEVACQKVAKLKKQQDSLLKEKSALELQNgDLLADRESSIKtigDL 1435
Cdd:pfam05557 100 ADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQQ-SSLAEAEQRIK---EL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1436 RRKYDQEATNRRIVMQEKMKLLgNIDALKKELQERKKENQELTSSKCDLSLLLKEAQDAKKNLEKEHTSMIQA------K 1509
Cdd:pfam05557 176 EFEIQSQEQDSEIVKNSKSELA-RIPELEKELERLREHNKHLNENIENKLLLKEEVEDLKRKLEREEKYREEAatleleK 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1510 DNLNAELKTCcceKNMLLRDGLNLQEEcQKLNEEIREIQQTLILEKEarakESETSLYENNKLHGRVVLLEEEIQRLRVC 1589
Cdd:pfam05557 255 EKLEQELQSW---VKLAQDTGLNLRSP-EDLSRRIEQLQQREIVLKE----ENSSLTSSARQLEKARRELEQELAQYLKK 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1590 SEQLQTENftltqeKTNSEQKvEEIIKEKELLSAETAQLAANIETLKSDFaALSKSKLELQELHSCLTKILDDLRlNHEV 1669
Cdd:pfam05557 327 IEDLNKKL------KRHKALV-RRLQRRVLLLTKERDGYRAILESYDKEL-TMSNYSPQLLERIEEAEDMTQKMQ-AHNE 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1670 ALTERAEVLQDNKNLLAEKREMMLRNEEALKEKEKLEESYFIlQKEISQLAQTNSHISA---------NLLESQSENRTL 1740
Cdd:pfam05557 398 EMEAQLSVAEEELGGYKQQAQTLERELQALRQQESLADPSYS-KEEVDSLRRKLETLELerqrlreqkNELEMELERRCL 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1741 RKDKSKLTLKIRELETLHSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLkenNLKTVEELNKSKE 1820
Cdd:pfam05557 477 QGDYDPKKTKVLHLSMNPAAEAYQQRKNQLEKLQAEIERLKRLLKKLEDDLEQVLRLPETTSTM---NFKEVLDLRKELE 553
|
570 580
....*....|....*....|...
gi 1720414365 1821 LLSVENQKMEE-FKKEIETLKQA 1842
Cdd:pfam05557 554 SAELKNQRLKEvFQAKIQEFRDV 576
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
336-1214 |
4.31e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 55.61 E-value: 4.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 336 VLELEAKMDQLRTMVEA--ADREKVELLNQLEEEK--RKVEDLQFRVEEESITKGDLETQTKLEHARTKELEQSLLFEKT 411
Cdd:pfam12128 188 MHSKEGKFRDVKSMIVAilEDDGVVPPKSRLNRQQveHWIRDIQAIAGIMKIRPEFTKLQQEFNTLESAELRLSHLHFGY 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 412 KADKLQRELEDTRVATVSE--KSRIMELEKDLAlraQEVAELRRRLESSKppgdvdmslsllQEISALQEKLEAIHTDH- 488
Cdd:pfam12128 268 KSDETLIASRQEERQETSAelNQLLRTLDDQWK---EKRDELNGELSAAD------------AAVAKDRSELEALEDQHg 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 489 ---QGEMTSLKEH------FGAREEAFQKEIKALHTATEKLSKENESLRSKLDhanKENSDVIALWKSKLE--------- 550
Cdd:pfam12128 333 aflDADIETAAADqeqlpsWQSELENLEERLKALTGKHQDVTAKYNRRRSKIK---EQNNRDIAGIKDKLAkireardrq 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 551 -TAIASHQQAME-ELKVSFSKGIGTDSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAhaKEMETMQAKLMKIIKEK 628
Cdd:pfam12128 410 lAVAEDDLQALEsELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENFD--ERIERAREEQEAANAEV 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 629 EDsLEAVKARLDSAEDQHLVemedtlnKLQEAEIKVKELEvlqakyteqsevignftSQLSAVKEKLLDldalrkanSEG 708
Cdd:pfam12128 488 ER-LQSELRQARKRRDQASE-------ALRQASRRLEERQ-----------------SALDELELQLFP--------QAG 534
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 709 KLeLETLRQQLEGAEKQI-KNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVnQVKETLEKElQTLKEKFASTSE 787
Cdd:pfam12128 535 TL-LHFLRKEAPDWEQSIgKVISPELLHRTDLDPEVWDGSVGGELNLYGVKLDLKRI-DVPEWAASE-EELRERLDKAEE 611
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 788 EAVSAQTRMQdtvnklhQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKmsgdnssqlt 867
Cdd:pfam12128 612 ALQSAREKQA-------AAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKALA---------- 674
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 868 kmnDELRLKERSVEELqlkltkanenasflqksigEVTLKAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYNQCQDL 947
Cdd:pfam12128 675 ---ERKDSANERLNSL-------------------EAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEGALDAQLA 732
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 948 KAKYEKASSETKTKHEeiLQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAksltylltsAKKEIEVMSEElrg 1027
Cdd:pfam12128 733 LLKAAIAARRSGAKAE--LKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERI---------AVRRQEVLRYF--- 798
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1028 lKSEKQLYAQEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSvnetlHLEKERVSEEKqvaekryqQEHRDRESLVA 1107
Cdd:pfam12128 799 -DWYQETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRA-----KLEMERKASEK--------QQVRLSENLRG 864
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1108 EREkLLKEINAaqeelLKMHMENDSLEASKVSMQVLIEELrfcKDKLMAMSEKARAEKEHLEGQVKKLTAENLVLVKDKD 1187
Cdd:pfam12128 865 LRC-EMSKLAT-----LKEDANSEQAQGSIGERLAQLEDL---KLKRDYLSESVKKYVEHFKNVIADHSGSGLAETWESL 935
|
890 900
....*....|....*....|....*..
gi 1720414365 1188 DVIQKLQSAYEELVKDQKALVQEIEDL 1214
Cdd:pfam12128 936 REEDHYQNDKGIRLLDYRKLVPYLEQW 962
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
338-884 |
5.25e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.53 E-value: 5.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 338 ELEAKMDQLRTMVEaadREKVELLNQLEEEKRKVEDLQFRVEEESitKGDLETQTKLEHARTKELEQSLLFEKTKADKLQ 417
Cdd:PTZ00121 1363 EEKAEAAEKKKEEA---KKKADAAKKKAEEKKKADEAKKKAEEDK--KKADELKKAAAAKKKADEAKKKAEEKKKADEAK 1437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 418 RELEDTRVAtvsEKSRIMELEKDLALRAQEVAELRRRLESSKPPGdvdmslsllqeisalQEKLEAIHTDHQGEMTSLKE 497
Cdd:PTZ00121 1438 KKAEEAKKA---DEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKA---------------EEAKKADEAKKKAEEAKKKA 1499
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 498 HFGAREEAFQKEIKALHTATEKlsKENESLRsKLDHANKENSDVIALWKSKLETAIASHQ--QAMEELKVSFSKGIGTDS 575
Cdd:PTZ00121 1500 DEAKKAAEAKKKADEAKKAEEA--KKADEAK-KAEEAKKADEAKKAEEKKKADELKKAEElkKAEEKKKAEEAKKAEEDK 1576
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 576 AEF---AELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQHLVEMED 652
Cdd:PTZ00121 1577 NMAlrkAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAE 1656
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 653 TLNKLQEAEIKVKELE----VLQAKYTEQSEviGNFTSQLSAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKN 728
Cdd:PTZ00121 1657 EENKIKAAEEAKKAEEdkkkAEEAKKAEEDE--KKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEE 1734
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 729 LETERNAESSKANSITKELQEKelvltglqdslNQVNQVKETLEKELQTLKEKFASTSEEAVSAQ--TRMQDTVNKLHQK 806
Cdd:PTZ00121 1735 AKKEAEEDKKKAEEAKKDEEEK-----------KKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEdeKRRMEVDKKIKDI 1803
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 807 EEQFNVLSSELEKLRENLTDMEAKF----KEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEE 882
Cdd:PTZ00121 1804 FDNFANIIEGGKEGNLVINDSKEMEdsaiKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEE 1883
|
..
gi 1720414365 883 LQ 884
Cdd:PTZ00121 1884 IE 1885
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1158-1971 |
5.90e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.07 E-value: 5.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1158 SEKARAEKEHLEGQVKKLTAENLVLVKDKDDVIQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKA 1237
Cdd:TIGR02169 186 IERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEK 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1238 ERENLLQTNRDLQFEKDTL-----RQGQEKLsasLEATLQVKQLLSTEAETLRTQLDcASKALRKAELDMRQLQTSNSSL 1312
Cdd:TIGR02169 266 RLEEIEQLLEELNKKIKDLgeeeqLRVKEKI---GELEAEIASLERSIAEKERELED-AEERLAKLEAEIDKLLAEIEEL 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1313 TKLLEEIKTCRAitdseciQLLHEKESLAASERTLLA----------------------------EKEELLSENRIITEK 1364
Cdd:TIGR02169 342 EREIEEERKRRD-------KLTEEYAELKEELEDLRAeleevdkefaetrdelkdyrekleklkrEINELKRELDRLQEE 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1365 LSKQSEEVARLEM---GLNEKITYLTSEKEVACQKVAKLKKQQDSLLKEKSALELQNGDLLADRESSIKTIGDLRRKYDQ 1441
Cdd:TIGR02169 415 LQRLSEELADLNAaiaGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAE 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1442 EATNRRIVMQEKMKLLGNIDALKKELQERKKENQELTSSKCDLSLLLKEA-------------QDAKKNLE--KEHTSMI 1506
Cdd:TIGR02169 495 AEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEVAagnrlnnvvveddAVAKEAIEllKRRKAGR 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1507 QAKDNLNaELKTCCCEKNMLLRDG-----LNLQEECQKLNEEIREI-QQTLILEKEARAKES---------ETSLYE--- 1568
Cdd:TIGR02169 575 ATFLPLN-KMRDERRDLSILSEDGvigfaVDLVEFDPKYEPAFKYVfGDTLVVEDIEAARRLmgkyrmvtlEGELFEksg 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1569 --------NNKLHGRVVLLEEEIQRLRVCSEQLQTENFTLTQEKTNSEQKVEEIIKEKELLSAETAQLAANIETLKSDfa 1640
Cdd:TIGR02169 654 amtggsraPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQE-- 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1641 aLSKSKLELQELHSCLTKIlddlrlnhEVALTERAEVLQDNKNLLAEKREMMLRNEEALKEKEK--LEESYFILQKEISQ 1718
Cdd:TIGR02169 732 -EEKLKERLEELEEDLSSL--------EQEIENVKSELKELEARIEELEEDLHKLEEALNDLEArlSHSRIPEIQAELSK 802
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1719 LAQTNSHISANLLESQSENRTLRKDKSKLTLKIRELETLHSFTAAQTAEDAMQIMEQMTKektetlasLEDTKQTNARLQ 1798
Cdd:TIGR02169 803 LEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGK--------KEELEEELEELE 874
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1799 NELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVTSHQKLE 1878
Cdd:TIGR02169 875 AALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLE 954
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1879 EERSVLNNQLLEMKKSLPSNTLRESEFR---KDADEEKASLQKSISLTSALLtEKDAELEKLRNEVtVLRGENATAKSLH 1955
Cdd:TIGR02169 955 DVQAELQRVEEEIRALEPVNMLAIQEYEevlKRLDELKEKRAKLEEERKAIL-ERIEEYEKKKREV-FMEAFEAINENFN 1032
|
890
....*....|....*.
gi 1720414365 1956 SVVQTLESDKVKLELK 1971
Cdd:TIGR02169 1033 EIFAELSGGTGELILE 1048
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
949-1522 |
7.72e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 54.84 E-value: 7.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 949 AKYEKASSETKTKHEEiLQNLQKMLADTE----DKLKAAQEANRDLMQDMEELKTQ-ADKAKSLTYLLTSAKKEIEVMSE 1023
Cdd:pfam12128 244 TKLQQEFNTLESAELR-LSHLHFGYKSDEtliaSRQEERQETSAELNQLLRTLDDQwKEKRDELNGELSAADAAVAKDRS 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1024 ELRGLKSEKQLYAQ---EANALKLEK-GSLLSKLIEVETKITLLQEDQQKLWSVNETLhlEKERVSEEKQVAEKRYQQEH 1099
Cdd:pfam12128 323 ELEALEDQHGAFLDadiETAAADQEQlPSWQSELENLEERLKALTGKHQDVTAKYNRR--RSKIKEQNNRDIAGIKDKLA 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1100 RDREslvaEREKLLKEINA---AQEELLKMHMENDSLEASKVSMQVL--IEELRFCKDKLMAMSE-------------KA 1161
Cdd:pfam12128 401 KIRE----ARDRQLAVAEDdlqALESELREQLEAGKLEFNEEEYRLKsrLGELKLRLNQATATPElllqlenfderieRA 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1162 RAEKEHLEGQVKKLTAENLVLVKDKDDVIQKLQSAYEELVKDQKALVQE-----------IEDLTTEKKSAAEKQMSLDN 1230
Cdd:pfam12128 477 REEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELelqlfpqagtlLHFLRKEAPDWEQSIGKVIS 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1231 TCLTLK------------AERENLLQTNRDLQ--------FEKDTLRQGQEKLSASLEATLQVKQLLSTEAETLRTQLDC 1290
Cdd:pfam12128 557 PELLHRtdldpevwdgsvGGELNLYGVKLDLKridvpewaASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEK 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1291 ASK-------ALRKAELDMRQLQTSNSSLT-KLLEEIKTCRAITDSECIQLLHEKESLAASERTLLAEKEELLSENRiiT 1362
Cdd:pfam12128 637 ASReetfartALKNARLDLRRLFDEKQSEKdKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREAR--T 714
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1363 EKLSKQSEEVARLEMGLNEKITYLTSEKEVACQKVAKLKKQQDSLLKEKSALELQNGDLLADRESSIKTIGDLRRKyDQE 1442
Cdd:pfam12128 715 EKQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVR-RQE 793
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1443 ATNRRIVMQEKMKLlgNIDALKKELQERKKENQELtssKCDLSLLLKEAQDAKKNLEKEHTSMIQAKDNLNAELKTCCCE 1522
Cdd:pfam12128 794 VLRYFDWYQETWLQ--RRPRLATQLSNIERAISEL---QQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCE 868
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
954-2031 |
8.55e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 54.35 E-value: 8.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 954 ASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMeelKTQADKAKSLTYLLTSAKKEIEVMSEELRGlKSEKQ 1033
Cdd:pfam15921 128 AMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDS---NTQIEQLRKMMLSHEGVLQEIRSILVDFEE-ASGKK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1034 LYAQEANALKLEK--GSLLSKLI-EVETKITLLQedqQKLWSVNETLhlekERVSEEKQVAEKRYQQEHRDR-ESLVAER 1109
Cdd:pfam15921 204 IYEHDSMSTMHFRslGSAISKILrELDTEISYLK---GRIFPVEDQL----EALKSESQNKIELLLQQHQDRiEQLISEH 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1110 EKllkEINAAQEELLKMHMENDSLEAskvsmqvlieelrfckdKLMAMSEKARAEKEHLEGQVKKLTAENLVLVKDKDDV 1189
Cdd:pfam15921 277 EV---EITGLTEKASSARSQANSIQS-----------------QLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREA 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1190 IQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAErenLLQTNRDLQFEKD-TLRQGQEKLSASLE 1268
Cdd:pfam15921 337 KRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLAD---LHKREKELSLEKEqNKRLWDRDTGNSIT 413
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1269 ATLQVKQLLSTEAETLRtqLDCASKALR-----KAELDMRQLQTSNSSLTKLleeiktcraitDSECIQLLHEKESLAAS 1343
Cdd:pfam15921 414 IDHLRRELDDRNMEVQR--LEALLKAMKsecqgQMERQMAAIQGKNESLEKV-----------SSLTAQLESTKEMLRKV 480
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1344 ERTLLAEKEELLSENRIITEkLSKQSEEVARLEMGLNEKITYLTSEKEVACQKVAKLKKQQDSLLK---EKSALELQNGD 1420
Cdd:pfam15921 481 VEELTAKKMTLESSERTVSD-LTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNvqtECEALKLQMAE 559
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1421 LLADRESSIKTIGDLRRKYDQEATNRRIVMQEKMKLlgnidalKKELQERKKENQELTSSKCDLSLLLKEAQDAKKNLEK 1500
Cdd:pfam15921 560 KDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQL-------EKEINDRRLELQEFKILKDKKDAKIRELEARVSDLEL 632
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1501 EHTSMIQAKDNLNAELKTCCCEKNMLLRDGLNLQEECQKLNEEIReiqqtlILEKEARAKESETSLyENNKLhgrvvlle 1580
Cdd:pfam15921 633 EKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYE------VLKRNFRNKSEEMET-TTNKL-------- 697
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1581 eEIQRLRVCSEQLQTENfTLTQEKTNSEQKVEEIIKEKELLSAETAQ---LAANIETLKSDFAALSKSKLELQELHSclt 1657
Cdd:pfam15921 698 -KMQLKSAQSELEQTRN-TLKSMEGSDGHAMKVAMGMQKQITAKRGQidaLQSKIQFLEEAMTNANKEKHFLKEEKN--- 772
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1658 kilddlrlnhevALTERAEVLQDNKNLLAEKREMMLRNEEALKEKEKLEEsyFILQKEISQLAQTNSHIsanllesQSEN 1737
Cdd:pfam15921 773 ------------KLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANME--VALDKASLQFAECQDII-------QRQE 831
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1738 RTLRKDKSKLTLKIRELETlhsftAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQN---ELDTLKENNLKTVEE 1814
Cdd:pfam15921 832 QESVRLKLQHTLDVKELQG-----PGYTSNSSMKPRLLQPASFTRTHSNVPSSQSTASFLSHhsrKTNALKEDPTRDLKQ 906
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1815 LnkSKELLSVENQkmeefkkeietlkqaaaQKSQQLSALQEENVklAEELGRTRDEVTS---HQKLEEERSVLNNQLLEM 1891
Cdd:pfam15921 907 L--LQELRSVINE-----------------EPTVQLSKAEDKGR--APSLGALDDRVRDciiESSLRSDICHSSSNSLQT 965
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1892 KKSLPSNTLRESEFRKDADEekaslqksISLTSALLTEKDAELEKLRNEVTVLRGENATAKSLHSVVQTLESDKVKLELK 1971
Cdd:pfam15921 966 EGSKSSETCSREPVLLHAGE--------LEDPSSCFTFPSTASPSVKNSASRSFHSSPKKSPVHSLLTSSAEGSIGSSSQ 1037
|
1050 1060 1070 1080 1090 1100
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720414365 1972 VKNlelqlkenKRQLSSSSGNTDAQAEEDERAQES----QQMIDFLNSVIVDLQRKNQDLKMKV 2031
Cdd:pfam15921 1038 YRS--------AKTIHSPDSVKDSQSLPIETTGKTcrklQNRLESLQTLVEDLQLKNQAMSSMI 1093
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
766-1633 |
9.24e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 54.28 E-value: 9.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 766 QVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLT---DMEAKFKEKDDREDQLV 842
Cdd:TIGR00606 203 QEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSkimKLDNEIKALKSRKKQME 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 843 KAKEKLENDIAEIMKMSGDNSSQLTKMND-ELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKHEE 921
Cdd:TIGR00606 283 KDNSELELKMEKVFQGTDEQLNDLYHNHQrTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEH 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 922 EKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEA-----------NRDL 990
Cdd:TIGR00606 363 IRARDSLIQSLATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQadeirdekkglGRTI 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 991 MQDMEELKTQADKAKSLTYL---LTSAKKEIEVMSEELRglKSEKQLYAQEANA----LKLEKGSLLSKLIEVETKITLL 1063
Cdd:TIGR00606 443 ELKKEILEKKQEELKFVIKElqqLEGSSDRILELDQELR--KAERELSKAEKNSltetLKKEVKSLQNEKADLDRKLRKL 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1064 QEDQQKL----WSVNETLHLEKERVSEEKQVAEKRYQQEHR---------DRESLVAEREKLLKEINAAQEELLKMHMEN 1130
Cdd:TIGR00606 521 DQEMEQLnhhtTTRTQMEMLTKDKMDKDEQIRKIKSRHSDEltsllgyfpNKKQLEDWLHSKSKEINQTRDRLAKLNKEL 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1131 DSLEASK----VSMQVLIEELRFCKDKLMAM--SEKARAEKEHLEGQVKKLTAENLVL----------VKDKDDVIQKLQ 1194
Cdd:TIGR00606 601 ASLEQNKnhinNELESKEEQLSSYEDKLFDVcgSQDEESDLERLKEEIEKSSKQRAMLagatavysqfITQLTDENQSCC 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1195 SAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENLLQTNRDLQFEKDTLRQGQEKLSASLEATLQVK 1274
Cdd:TIGR00606 681 PVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDI 760
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1275 QLLSTEAETLRTQLDCASKALRKAELdmrqLQTSNSSLTKLLEEIKTCRAITDSECIQLlhEKESLAASERTLLAEKEEL 1354
Cdd:TIGR00606 761 QRLKNDIEEQETLLGTIMPEEESAKV----CLTDVTIMERFQMELKDVERKIAQQAAKL--QGSDLDRTVQQVNQEKQEK 834
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1355 LSENRIITEKLskqsEEVARLEMGLNEKITYLTSEkevaCQKVAKLKKQQDSLLKEKSALELQNGDLLADRESSIKTIGD 1434
Cdd:TIGR00606 835 QHELDTVVSKI----ELNRKLIQDQQEQIQHLKSK----TNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKD 906
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1435 LRRKYDQEATNRRIVMQEKMKLLGNIDALKKELQERKKE-NQELTSSKCDLSLLLKEAQDAKKNLEKEHTSMIqakDNLN 1513
Cdd:TIGR00606 907 AKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDiKEKVKNIHGYMKDIENKIQDGKDDYLKQKETEL---NTVN 983
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1514 AELKTCCCEKNMLLRDGLNLQE--ECQKLNEEIREIQQTL-ILEKEARAKESETSLYENNKLHGRVVLLEEEIQRLRVCS 1590
Cdd:TIGR00606 984 AQLEECEKHQEKINEDMRLMRQdiDTQKIQERWLQDNLTLrKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEENI 1063
|
890 900 910 920
....*....|....*....|....*....|....*....|....*.
gi 1720414365 1591 EQL-QTENFTLTQEKTNSEQKV--EEIIKEKELLSAETAQLAANIE 1633
Cdd:TIGR00606 1064 DLIkRNHVLALGRQKGYEKEIKhfKKELREPQFRDAEEKYREMMIV 1109
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
632-822 |
1.02e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 54.15 E-value: 1.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 632 LEAVKARLDSAEDQhlvemedtlnkLQEAEIKVKELEVLQAKYTEQSEVIGNFTSQ------LSAVKEKLLDLDALRKAN 705
Cdd:COG4913 612 LAALEAELAELEEE-----------LAEAEERLEALEAELDALQERREALQRLAEYswdeidVASAEREIAELEAELERL 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 706 SEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELqtLKEKFAST 785
Cdd:COG4913 681 DASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL--LEERFAAA 758
|
170 180 190
....*....|....*....|....*....|....*..
gi 1720414365 786 SEEAVSAQTRmQDTVNKLHQKEEQFNVLSSELEKLRE 822
Cdd:COG4913 759 LGDAVERELR-ENLEERIDALRARLNRAEEELERAMR 794
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
361-879 |
1.21e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.89 E-value: 1.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 361 LNQLEEEKRKVEDLQFRVEE-ESITKGDLE-TQTKLEHARTKELEQSLLFEKTKADKLQRELEDTRvatvSEKSRIMELE 438
Cdd:PRK02224 161 LGKLEEYRERASDARLGVERvLSDQRGSLDqLKAQIEEKEEKDLHERLNGLESELAELDEEIERYE----EQREQARETR 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 439 KDLALRAQEVAELRRRLESskppgdvdmslsLLQEISALQEKLEAIHTDhqgemtslkehfgarEEAFQKEIKALHTATE 518
Cdd:PRK02224 237 DEADEVLEEHEERREELET------------LEAEIEDLRETIAETERE---------------REELAEEVRDLRERLE 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 519 KLSKENESLRSKLDHANKEnSDVIALWKSKLETAIASHQQAMEELKVSFSkgigtdsaefaELKTQIERLRldyqHEIES 598
Cdd:PRK02224 290 ELEEERDDLLAEAGLDDAD-AEAVEARREELEDRDEELRDRLEECRVAAQ-----------AHNEEAESLR----EDADD 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 599 LQSKQDSERSAhAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQhlveMEDTLNKLQEAEikvKELEVLQAKYTEQS 678
Cdd:PRK02224 354 LEERAEELREE-AAELESELEEAREAVEDRREEIEELEEEIEELRER----FGDAPVDLGNAE---DFLEELREERDELR 425
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 679 EVIGNFTSQLSAVKEKLLDLDALRKA-----------NSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSItKEL 747
Cdd:PRK02224 426 EREAELEATLRTARERVEEAEALLEAgkcpecgqpveGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERA-EDL 504
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 748 QEKElvltglqDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDM 827
Cdd:PRK02224 505 VEAE-------DRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAEL 577
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 1720414365 828 EAKFKEKDDREDQLVKAKEKLEnDIAEIMKMSG---DNSSQLTKMNDELR--LKERS 879
Cdd:PRK02224 578 NSKLAELKERIESLERIRTLLA-AIADAEDEIErlrEKREALAELNDERRerLAEKR 633
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
711-917 |
1.58e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.84 E-value: 1.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 711 ELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAV 790
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 791 SAQTRMQDTVNKLHQKEEQ----FNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQL 866
Cdd:COG4942 101 AQKEELAELLRALYRLGRQpplaLLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1720414365 867 TKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAAR 917
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1045-1789 |
1.93e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 53.43 E-value: 1.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1045 EKGSLLSKLIEVETKITLLQEDQQKLWSVNETLHLEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEELL 1124
Cdd:TIGR00618 164 EKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHA 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1125 KMHMENDSLEASKVSMQVLIEELRFCKDklmAMSEKARAEKEHLEGQVKKLTAENLVLVKDKDDVIQKLQSAYEELVKDQ 1204
Cdd:TIGR00618 244 YLTQKREAQEEQLKKQQLLKQLRARIEE---LRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKM 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1205 KALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENLLQTNRDLQF-----EKDTLRQGQEKLSASLEATLQVKQLLST 1279
Cdd:TIGR00618 321 RSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIreiscQQHTLTQHIHTLQQQKTTLTQKLQSLCK 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1280 EAETLRTQLDCASkALRKAELDMRQLQTSNSSLTKLLEEIKTCRAITDSECIQLLHEKESLAASERTLLAEKEELLSENR 1359
Cdd:TIGR00618 401 ELDILQREQATID-TRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKE 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1360 IITEKLSKQSEEVARLEMGLNEKityltsEKEVACQKVAKLKKQQDSLLKEKSALELQNGDllaDRESSIKTIGDLRRKY 1439
Cdd:TIGR00618 480 QIHLQETRKKAVVLARLLELQEE------PCPLCGSCIHPNPARQDIDNPGPLTRRMQRGE---QTYAQLETSEEDVYHQ 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1440 DQEATNRRIVMQEKMKLlgnidalkkELQERKKENQELTSSKCDLSLLLKEAQDAKKNLEKehtsmiqakdnlNAELKTC 1519
Cdd:TIGR00618 551 LTSERKQRASLKEQMQE---------IQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEK------------LSEAEDM 609
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1520 CCEKNMLLRDGLNLQEECQKLNEEIREIQQTLILEKEARAKESETSLYENNKLHGRVV--LLEEEIQRLRVCSEQLQTEN 1597
Cdd:TIGR00618 610 LACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIrvLPKELLASRQLALQKMQSEK 689
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1598 FTLTQEKtnseqkvEEIIKEKELLSAETAQLAANIETLKSDFAALSKSKLELQELHSCLTKILDDLRLNHEVALTERAEV 1677
Cdd:TIGR00618 690 EQLTYWK-------EMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEA 762
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1678 lQDNKNLLAEKREMMLRNEEALK-EKEKLEESYFILQKEISQL-AQTNSHISANLLESQSENRTLRKDKSKLTLKIREL- 1754
Cdd:TIGR00618 763 -HFNNNEEVTAALQTGAELSHLAaEIQFFNRLREEDTHLLKTLeAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKs 841
|
730 740 750
....*....|....*....|....*....|....*.
gi 1720414365 1755 ETLHSFTAAQTA-EDAMQIMEQMTKEKTETLASLED 1789
Cdd:TIGR00618 842 ATLGEITHQLLKyEECSKQLAQLTQEQAKIIQLSDK 877
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
705-1515 |
3.20e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.84 E-value: 3.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 705 NSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFAS 784
Cdd:PTZ00121 1055 NHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEAR 1134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 785 TSEEAVSAQ-TRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNS 863
Cdd:PTZ00121 1135 KAEDARKAEeARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKA 1214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 864 SQLTKMNDELRLKE-RSVEELQLK---LTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLELEKKME- 938
Cdd:PTZ00121 1215 EEARKAEDAKKAEAvKKAEEAKKDaeeAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADe 1294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 939 ----TSYNQCQDLKAKYEKA--SSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKSLTYLLT 1012
Cdd:PTZ00121 1295 akkaEEKKKADEAKKKAEEAkkADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKE 1374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1013 SAKKEIEVMSEelrglKSEKQLYAQEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSVNETLHLEKERVSEEKQVAE 1092
Cdd:PTZ00121 1375 EAKKKADAAKK-----KAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEA 1449
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1093 KRYQQEHRDRESLV--AEREKLLKEINAAQEELLKMHMENDSLEASKVSMQVL--IEELRFCKDKLMAMSEKARAEKEHL 1168
Cdd:PTZ00121 1450 KKKAEEAKKAEEAKkkAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAkkAAEAKKKADEAKKAEEAKKADEAKK 1529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1169 EGQVKKLTAENLVLVKDKDDVIQKLqsayEELVKdqkalVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENLLQTNRD 1248
Cdd:PTZ00121 1530 AEEAKKADEAKKAEEKKKADELKKA----EELKK-----AEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKL 1600
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1249 LQFEKdtlRQGQEKLSASLEATLQVKQLLSTEAETLRTQLDCASKALRKAELDMRQLQTSNSSLTKLLEEIKTCRAITDS 1328
Cdd:PTZ00121 1601 YEEEK---KMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKA 1677
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1329 ECIQLLHEKESLAASERTLLAEKEELLSENRIITEKLSKQSEEVARLEMGLNEKITYLTSEKEVACQKVAKLKKQQDsll 1408
Cdd:PTZ00121 1678 EEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEE--- 1754
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1409 KEKSALELQNGDLLADRESSIKTIGDLRRKYDQEATNRRIVMQEKMKllgNIDALKKELQERKKENQE-LTSSKCDLSLL 1487
Cdd:PTZ00121 1755 EKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIK---DIFDNFANIIEGGKEGNLvINDSKEMEDSA 1831
|
810 820
....*....|....*....|....*...
gi 1720414365 1488 LKEAQDAKKNLEKEHTSMIQAKDNLNAE 1515
Cdd:PTZ00121 1832 IKEVADSKNMQLEEADAFEKHKFNKNNE 1859
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
634-855 |
3.58e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 52.61 E-value: 3.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 634 AVKARLDSAEDQ--HLVEMEDTLNKLQEaeiKVKELEVLQAKYTEqsevignftsqLSAVKEKLLDLDALRKAnsegkLE 711
Cdd:COG4913 222 DTFEAADALVEHfdDLERAHEALEDARE---QIELLEPIRELAER-----------YAAARERLAELEYLRAA-----LR 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 712 LETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQV-NQVKETLEKELQTLKEKFastsEEAV 790
Cdd:COG4913 283 LWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNgGDRLEQLEREIERLEREL----EERE 358
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720414365 791 SAQTRMQDTVNKLHQK----EEQFNVLSSELEKLRENLTDMEAKFKEK----DDREDQLVKAKEKLENDIAEI 855
Cdd:COG4913 359 RRRARLEALLAALGLPlpasAEEFAALRAEAAALLEALEEELEALEEAlaeaEAALRDLRRELRELEAEIASL 431
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1527-1981 |
4.02e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 52.35 E-value: 4.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1527 LRDGLN-LQEECQKLNEEIREIQQTLILEKEARAKESETsLYENNKLHGRVVLLEEEIQRLRVCSEQLQTENFTLTQEKT 1605
Cdd:PRK02224 204 LHERLNgLESELAELDEEIERYEEQREQARETRDEADEV-LEEHEERREELETLEAEIEDLRETIAETEREREELAEEVR 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1606 NSEQKVEEIIKEKELLSAETAQLAANIETLKSDFAALSKSKLELQElhSCLTKILDDLRLNHEV-ALTERAEVLQD-NKN 1683
Cdd:PRK02224 283 DLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRD--RLEECRVAAQAHNEEAeSLREDADDLEErAEE 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1684 LLAEKREMMLRNEEALKEKEKLEESYFILQKEISQLAQTNSHISANLLESQSENRTLRKDKSKLTLKIRELETLHSfTAA 1763
Cdd:PRK02224 361 LREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLR-TAR 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1764 QTAEDAMQIMEQ-------MTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQ------KME 1830
Cdd:PRK02224 440 ERVEEAEALLEAgkcpecgQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRierleeRRE 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1831 EFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVTS-HQKLEEERSV---LNNQLLEMKKSLPS-NTLRES-E 1904
Cdd:PRK02224 520 DLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEaEEEAEEAREEvaeLNSKLAELKERIESlERIRTLlA 599
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720414365 1905 FRKDADEEKASLQKSISLTSALLTEKDAELEKLRNEVTVLRGENATAKslhsvVQTLESDKVKLELKVKNLELQLKE 1981
Cdd:PRK02224 600 AIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEAR-----IEEAREDKERAEEYLEQVEEKLDE 671
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
709-916 |
4.16e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 52.22 E-value: 4.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 709 KLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKeLVLTGLQDSLNQVNQvketlekELQTLKEKFASTSEE 788
Cdd:PRK11281 79 KEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLST-LSLRQLESRLAQTLD-------QLQNAQNDLAEYNSQ 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 789 AVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLEndiaeimKMSGDNSSQLTk 868
Cdd:PRK11281 151 LVSLQTQPERAQAALYANSQRLQQIRNLLKGGKVGGKALRPSQRVLLQAEQALLNAQNDLQ-------RKSLEGNTQLQ- 222
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1720414365 869 mndELRLKERsvEELQLKLTKANENASFLQKSIGEVTLkaEQSQQQAA 916
Cdd:PRK11281 223 ---DLLQKQR--DYLTARIQRLEHQLQLLQEAINSKRL--TLSEKTVQ 263
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
402-993 |
4.28e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 52.22 E-value: 4.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 402 LEQSLLFEKtkADKLQ---RELEDTRVATVSEKSRIMELE--KDLALRAQEVAELRRRLESSKPPGDVDMSLSLLQEISA 476
Cdd:COG4913 218 LEEPDTFEA--ADALVehfDDLERAHEALEDAREQIELLEpiRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 477 LQEKLEAIHTDHQGEMTSLKehfgAREEAFQKEIKALHTATEKLSKEN-ESLRSKLDHANKEnsdvialwKSKLETAIAS 555
Cdd:COG4913 296 ELEELRAELARLEAELERLE----ARLDALREELDELEAQIRGNGGDRlEQLEREIERLERE--------LEERERRRAR 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 556 HQQAMEELKVSFSkgigTDSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAHAKemetmqakLMKIIKEKEDSLEAV 635
Cdd:COG4913 364 LEALLAALGLPLP----ASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRD--------LRRELRELEAEIASL 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 636 KARlDSAEDQHLVEMEDTLNklQEAEIKVKEL----EVLQAKYTEQS-----E-VIGNF-TSQLsaVKEKLLDlDALRKA 704
Cdd:COG4913 432 ERR-KSNIPARLLALRDALA--EALGLDEAELpfvgELIEVRPEEERwrgaiErVLGGFaLTLL--VPPEHYA-AALRWV 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 705 NSEgKLELetlRQQLEGAEKQIKNLETERnaesSKANSITKELQEKELVLTG-LQDSLNQVNQVK--ETLEkELQtlKEK 781
Cdd:COG4913 506 NRL-HLRG---RLVYERVRTGLPDPERPR----LDPDSLAGKLDFKPHPFRAwLEAELGRRFDYVcvDSPE-ELR--RHP 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 782 FASTseeaVSAQTRMQDTvnkLHQK----------------EEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAK 845
Cdd:COG4913 575 RAIT----RAGQVKGNGT---RHEKddrrrirsryvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQERR 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 846 EKLEN---------DIAEIMKMSGDNSSQLTKM---NDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQ 913
Cdd:COG4913 648 EALQRlaeyswdeiDVASAEREIAELEAELERLdasSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEE 727
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 914 QAARKHEEEKKELEEKLLELEkkmetsynqcQDLKAKYEKASSETKTKheEILQNLQKMLADTEDKLKAAQEANRDLMQD 993
Cdd:COG4913 728 ELDELQDRLEAAEDLARLELR----------ALLEERFAAALGDAVER--ELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1600-1852 |
4.90e-06 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 51.83 E-value: 4.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1600 LTQEKTNSEQKVEEIIKEKELLSAETAQLAANIETLKSDFAALSKSKLELQELHSCLTKILDDLRLNHEvalTERAEVLQ 1679
Cdd:PLN02939 147 LNQARLQALEDLEKILTEKEALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQLEKLRNELLIRGA---TEGLCVHS 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1680 DNKNLLAEKRE-MMLRNE-EALKEK----EKLEESYFILQKEISQLAQTNSHISANLLESQSenrtlrkDKSKL-TLKI- 1751
Cdd:PLN02939 224 LSKELDVLKEEnMLLKDDiQFLKAElievAETEERVFKLEKERSLLDASLRELESKFIVAQE-------DVSKLsPLQYd 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1752 ---RELETLHSF--TAAQTAEDAMQIMEQMT--KEKTETL-ASLEDTKQTnaRLQNELDTLKENNLKTVEE-LNKS-KEL 1821
Cdd:PLN02939 297 cwwEKVENLQDLldRATNQVEKAALVLDQNQdlRDKVDKLeASLKEANVS--KFSSYKVELLQQKLKLLEErLQASdHEI 374
|
250 260 270
....*....|....*....|....*....|....
gi 1720414365 1822 LS---VENQKMEEFKKEIETLKQAAAQKSQQLSA 1852
Cdd:PLN02939 375 HSyiqLYQESIKEFQDTLSKLKEESKKRSLEHPA 408
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
698-854 |
5.25e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 49.92 E-value: 5.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 698 LDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKE--TLEKEL 775
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEyeALQKEI 98
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720414365 776 QTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLtdmEAKFKEKDDREDQLVKAKEKLENDIAE 854
Cdd:COG1579 99 ESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAEL---DEELAELEAELEELEAEREELAAKIPP 174
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
338-1314 |
5.33e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 51.97 E-value: 5.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 338 ELEAKMDQLRTMVEAADREKVELlNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARTKELEQSLLFEKTKADKLQ 417
Cdd:TIGR00606 225 QITSKEAQLESSREIVKSYENEL-DPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQL 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 418 RELEDTRVATVSEKSR-IMELEKDLALRAQEvaelRRRLESSKPPGDVDMSLSLLQEiSALQEKLEAIHTDHQGEMTSLK 496
Cdd:TIGR00606 304 NDLYHNHQRTVREKEReLVDCQRELEKLNKE----RRLLNQEKTELLVEQGRLQLQA-DRHQEHIRARDSLIQSLATRLE 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 497 EHFGAREEAFQKEIKALHTatekLSKENESLRSKLdhankensdvIALWKSKLETAIASHQQAMEELKVSFSKGIGTDSA 576
Cdd:TIGR00606 379 LDGFERGPFSERQIKNFHT----LVIERQEDEAKT----------AAQLCADLQSKERLKQEQADEIRDEKKGLGRTIEL 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 577 EFAELKTQIERLRldyqHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQHLVEMEDTLNK 656
Cdd:TIGR00606 445 KKEILEKKQEELK----FVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKL 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 657 LQEAEIKVKELEVLqakyteqsevignfTSQLSAVKEKLLDLDALRKANSEGKLELETlrqqLEGAEKQIKNLETERNAE 736
Cdd:TIGR00606 521 DQEMEQLNHHTTTR--------------TQMEMLTKDKMDKDEQIRKIKSRHSDELTS----LLGYFPNKKQLEDWLHSK 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 737 SSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKF--ASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLS 814
Cdd:TIGR00606 583 SKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLfdVCGSQDEESDLERLKEEIEKSSKQRAMLAGAT 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 815 SELEKLRENLTDMEAKFKEKDDREdqlVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENA 894
Cdd:TIGR00606 663 AVYSQFITQLTDENQSCCPVCQRV---FQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSII 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 895 SFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLELEKkmETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMla 974
Cdd:TIGR00606 740 DLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPE--EESAKVCLTDVTIMERFQMELKDVERKIAQQAAKL-- 815
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 975 DTEDKLKAAQEANRDLMQDMEELKTQADKAKSLTYLLTSAKKEIEVMSEELRGLKSEK-QLYAQEANALKLEKgsllskl 1053
Cdd:TIGR00606 816 QGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKlQIGTNLQRRQQFEE------- 888
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1054 iEVETKITLLQEdqqklwsVNETLHLEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEELLKMHMENDSL 1133
Cdd:TIGR00606 889 -QLVELSTEVQS-------LIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDI 960
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1134 EAskvsmQVLIEELRFCKDKLMAMSeKARAEKEHLEGQVKKLTAENLVLVKDKDDviqklQSAYEELVKDQKALVQEIED 1213
Cdd:TIGR00606 961 EN-----KIQDGKDDYLKQKETELN-TVNAQLEECEKHQEKINEDMRLMRQDIDT-----QKIQERWLQDNLTLRKRENE 1029
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1214 LTTEKKSAAEKQMSLDNTCLTLKAERENLLQTNRDLQFEKDTLRQGQEKLSAsleatlqvKQLLSTEAETLRTQLDCASK 1293
Cdd:TIGR00606 1030 LKEVEEELKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYE--------KEIKHFKKELREPQFRDAEE 1101
|
970 980
....*....|....*....|.
gi 1720414365 1294 ALRKAELDMRQLQTSNSSLTK 1314
Cdd:TIGR00606 1102 KYREMMIVMRTTELVNKDLDI 1122
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1000-1224 |
5.44e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.92 E-value: 5.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1000 QADKAKSLTYLLTSAKKEIEVMSEELRGLKSEKQLYAQEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSVNETLHL 1079
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1080 EKERVSEE-KQVAEKRYQQEHRDRESLV---------AEREKLLKEINAAQEELLkmhmenDSLEASKVSMQVLIEELRF 1149
Cdd:COG4942 98 ELEAQKEElAELLRALYRLGRQPPLALLlspedfldaVRRLQYLKYLAPARREQA------EELRADLAELAALRAELEA 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720414365 1150 CKDKLMAMSEKARAEKEHLEgqvkKLTAENLVLVKDKDDVIQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEK 1224
Cdd:COG4942 172 ERAELEALLAELEEERAALE----ALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
362-914 |
7.40e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 51.17 E-value: 7.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 362 NQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARTKELEQSLLFEKTKADKL------------------------- 416
Cdd:TIGR04523 47 NELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLnsdlskinseikndkeqknklevel 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 417 ---QRELEDTRVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKppgdvDMSLSLLQEISALQEKLEAIHTDHqgemt 493
Cdd:TIGR04523 127 nklEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELE-----NELNLLEKEKLNIQKNIDKIKNKL----- 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 494 SLKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSD---VIALWKSKLETAIASHQQAMEELK------ 564
Cdd:TIGR04523 197 LKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEkttEISNTQTQLNQLKDEQNKIKKQLSekqkel 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 565 VSFSKGIGTDSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAED 644
Cdd:TIGR04523 277 EQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSES 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 645 qhlvemeDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDalrKANSEGKLELETLRQQLEGAEK 724
Cdd:TIGR04523 357 -------ENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQE---KLNQQKDEQIKKLQQEKELLEK 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 725 QIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKekfastseeavsaqtrmqdtvNKLH 804
Cdd:TIGR04523 427 EIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIK---------------------QNLE 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 805 QKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELR--LKERSVEE 882
Cdd:TIGR04523 486 QKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKkeNLEKEIDE 565
|
570 580 590
....*....|....*....|....*....|..
gi 1720414365 883 LQLKLTKANENASFLQKSIGEVTLKAEQSQQQ 914
Cdd:TIGR04523 566 KNKEIEELKQTQKSLKKKQEEKQELIDQKEKE 597
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
613-1413 |
1.10e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 50.94 E-value: 1.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 613 EMETMQAKLMKIIKEKEDSLEAVKARLDSAED---QHLVEMEDTLNKLQEAEIKVKELEVLQAKYteqsevignftsQLS 689
Cdd:pfam01576 58 EAEEMRARLAARKQELEEILHELESRLEEEEErsqQLQNEKKKMQQHIQDLEEQLDEEEAARQKL------------QLE 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 690 AV----KEKLLDLDALRKANSEGKLELEtlRQQLEgaeKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVN 765
Cdd:pfam01576 126 KVtteaKIKKLEEDILLLEDQNSKLSKE--RKLLE---ERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEE 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 766 QVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQfnvLSSELEKLRENLTDMEAKFKEKDDREDQLVKAK 845
Cdd:pfam01576 201 KGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEE---LQAALARLEEETAQKNNALKKIRELEAQISELQ 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 846 EKLENDIA---EIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEE 922
Cdd:pfam01576 278 EDLESERAarnKAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQA 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 923 KKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKT-------------KHEEILQNLQKMLADTE-------DKLKA 982
Cdd:pfam01576 358 LEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTlqqakqdsehkrkKLEGQLQELQARLSESErqraelaEKLSK 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 983 AQEANRDLMQDMEELKTQADK-AKSLTYLLTSAKKEIEVMSEELRglksEKQLYAQEANALKLEKGSLLSKLIEVETKit 1061
Cdd:pfam01576 438 LQSELESVSSLLNEAEGKNIKlSKDVSSLESQLQDTQELLQEETR----QKLNLSTRLRQLEDERNSLQEQLEEEEEA-- 511
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1062 lLQEDQQKLWSVNETLHLEKERVSEEKQVAE------KRYQQE----HRDRESLVAEREKLLKEINAAQEELLKMHMEND 1131
Cdd:pfam01576 512 -KRNVERQLSTLQAQLSDMKKKLEEDAGTLEaleegkKRLQRElealTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLD 590
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1132 S-------LEASKVSMQVLIEELRFCKDKLMAMSEKARAE---------------------KEHLEGQVKKLTAENLVLV 1183
Cdd:pfam01576 591 HqrqlvsnLEKKQKKFDQMLAEEKAISARYAEERDRAEAEareketralslaraleealeaKEELERTNKQLRAEMEDLV 670
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1184 KDKDDV------IQKLQSAYEELVKDQKALVQEIEDlttEKKSAAEKQMSLDNTCLTLKAERENLLQTNRDLQFEKDTLR 1257
Cdd:pfam01576 671 SSKDDVgknvheLERSKRALEQQVEEMKTQLEELED---ELQATEDAKLRLEVNMQALKAQFERDLQARDEQGEEKRRQL 747
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1258 QGQ-EKLSASLE-------ATLQVKQLLSTEAETLRTQLDCASKALRKAELDMRQLQTSNSSLTKLLEEIKTCRA---IT 1326
Cdd:pfam01576 748 VKQvRELEAELEderkqraQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDeilAQ 827
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1327 DSEC--------IQLLHEKESLAASER---TLLAEKEELLSENRIITEKLSKQSEEVARLE---MGLNEKITYLTSEKEV 1392
Cdd:pfam01576 828 SKESekklknleAELLQLQEDLAASERarrQAQQERDELADEIASGASGKSALQDEKRRLEariAQLEEELEEEQSNTEL 907
|
890 900
....*....|....*....|.
gi 1720414365 1393 ACQKVAKLKKQQDSLLKEKSA 1413
Cdd:pfam01576 908 LNDRLRKSTLQVEQLTTELAA 928
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1488-1989 |
1.16e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.79 E-value: 1.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1488 LKEAQDAKKNLEKEHTSMIQAKDNLNAELKTCCCEKNMLLRDGLNLQEECQKLNEEIREIQQTL------ILEKEARAKE 1561
Cdd:TIGR04523 49 LKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIkndkeqKNKLEVELNK 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1562 SETSLYENNKLHGRVVlleEEIQRLRVCSEQLQTENFTLTQEKTNSEqkveeiiKEKELLSAETAQLAANIETLKSDFAA 1641
Cdd:TIGR04523 129 LEKQKKENKKNIDKFL---TEIKKKEKELEKLNNKYNDLKKQKEELE-------NELNLLEKEKLNIQKNIDKIKNKLLK 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1642 LSKSKLELQ---ELHSCLTKILDDLRlNHEVALTERAEVLQDNKNllaEKREMMLRNEEALKE-KEKLEESYFILQKEIS 1717
Cdd:TIGR04523 199 LELLLSNLKkkiQKNKSLESQISELK-KQNNQLKDNIEKKQQEIN---EKTTEISNTQTQLNQlKDEQNKIKKQLSEKQK 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1718 QLAQTNSHIS---ANLLESQSENRTLRKDKSKLTLKireleTLHSFTAAQTAEdamqiMEQMTKEKTETLASLEDTKQTN 1794
Cdd:TIGR04523 275 ELEQNNKKIKeleKQLNQLKSEISDLNNQKEQDWNK-----ELKSELKNQEKK-----LEEIQNQISQNNKIISQLNEQI 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1795 ARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETL--------------KQAAAQKSQQLSALQEENVKL 1860
Cdd:TIGR04523 345 SQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLesqindleskiqnqEKLNQQKDEQIKKLQQEKELL 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1861 AEELGRTRDEVTSHQK----LEEERSVLNNQLLEMKKSLPSNTLRESEFRKDADEEKASLQKsislTSALLTEKDAELEK 1936
Cdd:TIGR04523 425 EKEIERLKETIIKNNSeikdLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQ----KQKELKSKEKELKK 500
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 1720414365 1937 LRNEVTVLRGENATAK----SLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSS 1989
Cdd:TIGR04523 501 LNEEKKELEEKVKDLTkkisSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKE 557
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
757-1008 |
1.26e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.76 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 757 LQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDD 836
Cdd:COG4942 25 AEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 837 REDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMndeLRLKERSVEELQLKLTKanenasfLQKSIGEVTLKAEQSQQQAA 916
Cdd:COG4942 105 ELAELLRALYRLGRQPPLALLLSPEDFLDAVRR---LQYLKYLAPARREQAEE-------LRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 917 RKheeekkeleekllelekkmETSYNQCQDLKAKYEKAssetKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEE 996
Cdd:COG4942 175 EL-------------------EALLAELEEERAALEAL----KAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
250
....*....|..
gi 1720414365 997 LKTQADKAKSLT 1008
Cdd:COG4942 232 LEAEAAAAAERT 243
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1459-1984 |
1.37e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 50.29 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1459 NIDALKKELQERKKENQELTSSKCDLSLLLKEAQDAKKNLEKEHTSMIQAKDNLNAELKTCcceknmllrdgLNLQEECQ 1538
Cdd:PRK01156 184 NIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNEL-----------SSLEDMKN 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1539 KLNEEIREIQQTLILEKEARAKESETSLYENNKLHGRVVLLEEEIQRLRVCSEQLqtENFTLTQEKTNSE-QKVEEIIKE 1617
Cdd:PRK01156 253 RYESEIKTAESDLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYKNDI--ENKKQILSNIDAEiNKYHAIIKK 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1618 KELLSAETAQLaaniETLKSDFAALSKSKLELQELHS----------CLTKILDDLRLNHEVALTERAEVLqdnKNLLAE 1687
Cdd:PRK01156 331 LSVLQKDYNDY----IKKKSRYDDLNNQILELEGYEMdynsylksieSLKKKIEEYSKNIERMSAFISEIL---KIQEID 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1688 KREMMLRNEEALKEKEKLEESYFILQKEISQLAQTNSHIS--ANLLESQS------------ENRTLRK----DKSKLTL 1749
Cdd:PRK01156 404 PDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSrnMEMLNGQSvcpvcgttlgeeKSNHIINhyneKKSRLEE 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1750 KIRELETLHSfTAAQTAEDAMQIMEQMTKEKTETLAS----LEDTKQTNARLQNELDTLKENNLKTVEELNKSKEL-LSV 1824
Cdd:PRK01156 484 KIREIEIEVK-DIDEKIVDLKKRKEYLESEEINKSINeynkIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLkLED 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1825 ENQKMEEFKK--------EIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVTSH-QKLEEERSVLNNQ--LLEMKK 1893
Cdd:PRK01156 563 LDSKRTSWLNalavisliDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSiREIENEANNLNNKynEIQENK 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1894 SLPSNTLRESEFRKDADEEKASLQKSISLTSALLTEKDAELEKLRNEvtvLRGENATAKSLHSVVQTLESDKVKLELKVK 1973
Cdd:PRK01156 643 ILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKA---LDDAKANRARLESTIEILRTRINELSDRIN 719
|
570
....*....|.
gi 1720414365 1974 NLELQLKENKR 1984
Cdd:PRK01156 720 DINETLESMKK 730
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1344-2049 |
1.52e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 50.36 E-value: 1.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1344 ERTLLAEKEELLSENRIITEKLSKQSEEVARLEMGLNEKITYLTSEKEVACQKVAKLKKQQDSLLKEKSALELQNGDLLA 1423
Cdd:pfam02463 172 KEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1424 DRESSIKTIGDLRRKYDQEATNRRIVMQEKMKLLGNIDALKKELQERKKENQELTSSKCDLSLLLKEAQDAKKNLEKEHT 1503
Cdd:pfam02463 252 EIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELK 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1504 SMIQAKDNLNAELKTccCEKNMLLRDGLNLQEECQKLNEEIREIQQTLILEKEARAKESETSLYENNKLhgrvvLLEEEI 1583
Cdd:pfam02463 332 KEKEEIEELEKELKE--LEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELE-----LKSEEE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1584 QRLRVCSEQLQTENFTLTQEKTNSEQKVEEIIKEKELLSAETAQLAANIETLKSDFAALSKS---------KLELQELHS 1654
Cdd:pfam02463 405 KEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELElkksedllkETQLVKLQE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1655 CLTKILDDLRLNHEVALTERAE--------------------------------------------VLQDNKNLLAEKRE 1690
Cdd:pfam02463 485 QLELLLSRQKLEERSQKESKARsglkvllalikdgvggriisahgrlgdlgvavenykvaistaviVEVSATADEVEERQ 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1691 MMLRNEEALKEKEKLEESYFILQKEISQLAQTNSHISANLLESQSENRTLRKDKSKLTLKIRELETLHSFTAAQTAEDAM 1770
Cdd:pfam02463 565 KLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAK 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1771 QIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQL 1850
Cdd:pfam02463 645 ESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLA 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1851 SALQEENVKLAEELGRTRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESEFRKDADEEKASLQKSISLTSALLTEK 1930
Cdd:pfam02463 725 DRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELR 804
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1931 DAELEKLRNEVTVLRGENATAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDAQAEEDERAQESQQMI 2010
Cdd:pfam02463 805 ALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKL 884
|
730 740 750
....*....|....*....|....*....|....*....
gi 1720414365 2011 DFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGEDLNSY 2049
Cdd:pfam02463 885 KDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERI 923
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1659-1999 |
1.94e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.07 E-value: 1.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1659 ILDDLRLNHEVALTERAEVLQdNKNLLAEKREmmLRNEEALKEKEKLEESYFILQKEISQLAQTNSHISANLLESQSENR 1738
Cdd:TIGR02169 192 IIDEKRQQLERLRREREKAER-YQALLKEKRE--YEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLE 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1739 TLRKDKSKLTLKIRELetlhsftaaqTAEDAMQIMEQMTkektETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKS 1818
Cdd:TIGR02169 269 EIEQLLEELNKKIKDL----------GEEEQLRVKEKIG----ELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKL 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1819 KELLSVENQKMEEFKKEIETLKQAAAQKSQQLSAL----QEENVKLAEELGRTRDEVTSHQKLEEERsvlnNQLLEMKKS 1894
Cdd:TIGR02169 335 LAEIEELEREIEEERKRRDKLTEEYAELKEELEDLraelEEVDKEFAETRDELKDYREKLEKLKREI----NELKRELDR 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1895 LPSNTLRESEFRKDADEEKASLQKSISLTSALLTEKDAELEKLRNEVTVLRGENATAKSLHSVVQTlESDKVKLELKVKN 1974
Cdd:TIGR02169 411 LQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKE-EYDRVEKELSKLQ 489
|
330 340
....*....|....*....|....*
gi 1720414365 1975 LELQLKENKRQLSSSSGNTDAQAEE 1999
Cdd:TIGR02169 490 RELAEAEAQARASEERVRGGRAVEE 514
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1793-2017 |
2.09e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 49.91 E-value: 2.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1793 TNARLQNELDTLKENNLKTVEE------LNKSKELLsvenQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELG- 1865
Cdd:PRK11281 37 TEADVQAQLDALNKQKLLEAEDklvqqdLEQTLALL----DKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDe 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1866 --RTRDEVTSHQKLEEERSVLNNQLLEMKKSLpsntlresefrKDADEEKASLQKSISLTSALLTEKDAELEKLRNEvtv 1943
Cdd:PRK11281 113 etRETLSTLSLRQLESRLAQTLDQLQNAQNDL-----------AEYNSQLVSLQTQPERAQAALYANSQRLQQIRNL--- 178
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414365 1944 LRGENATAKSLHSvvqtleSDKVKLELKVKNLELQLKENKRQLSSSSGNTD-AQAEED---ERAQESQQMIDFLNSVI 2017
Cdd:PRK11281 179 LKGGKVGGKALRP------SQRVLLQAEQALLNAQNDLQRKSLEGNTQLQDlLQKQRDyltARIQRLEHQLQLLQEAI 250
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
658-1159 |
2.12e-05 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 49.75 E-value: 2.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 658 QEAEIKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAES 737
Cdd:pfam07111 63 QQAELISRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELDALAVAEKAGQAEAEGLRAALAGAEMVRKNLEEGSQREL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 738 SKANSITKElqEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSEL 817
Cdd:pfam07111 143 EEIQRLHQE--QLSSLTQAHEEALSSLTSKAEGLEKSLNSLETKRAGEAKQLAEAQKEAELLRKQLSKTQEELEAQVTLV 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 818 EKLRENLTDM---EAKFKEKDDREDQLVKAKEKLENDIAEI---MKMSGDNSSQLTKM----NDELRLKERSVEELQLKL 887
Cdd:pfam07111 221 ESLRKYVGEQvppEVHSQTWELERQELLDTMQHLQEDRADLqatVELLQVRVQSLTHMlalqEEELTRKIQPSDSLEPEF 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 888 TKANEN--ASFLQKSIG-EVTLKAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYNQC-QDLKAKYEKASSETKT--- 960
Cdd:pfam07111 301 PKKCRSllNRWREKVFAlMVQLKAQDLEHRDSVKQLRGQVAELQEQVTSQSQEQAILQRAlQDKAAEVEVERMSAKGlqm 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 961 ---KHEEILQNLQKMLADTEDKLK----AAQEANRDLMQDMEELKTQADKAKSLTYLLTSAKKEIEVmseeLRGLKSEKQ 1033
Cdd:pfam07111 381 elsRAQEARRRQQQQTASAEEQLKfvvnAMSSTQIWLETTMTRVEQAVARIPSLSNRLSYAVRKVHT----IKGLMARKV 456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1034 LYAQeanaLKLEKGSLLSKLIEVETKITLLQEDqqklwsvnetLHLEKERVSEEKQVAEKRYQQE-HRDRESLVAEREKL 1112
Cdd:pfam07111 457 ALAQ----LRQESCPPPPPAPPVDADLSLELEQ----------LREERNRLDAELQLSAHLIQQEvGRAREQGEAERQQL 522
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 1720414365 1113 LK-------EINAAQEELLKMHMEndsLEASKVSMQVLIEELRFCKDKLMAMSE 1159
Cdd:pfam07111 523 SEvaqqleqELQRAQESLASVGQQ---LEVARQGQQESTEEAASLRQELTQQQE 573
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
353-1045 |
2.84e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 49.40 E-value: 2.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 353 ADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARTKELEQSLLFEKTKADKLQREledtrvaTVSEKS 432
Cdd:pfam01576 59 AEEMRARLAARKQELEEILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLE-------KVTTEA 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 433 RIMELEKDLALRAQEVAELRRrlESSKPPGDVDMSLSLLQEISALQEKLEAIHTDHQGEMTSLkehfgarEEAFQKEika 512
Cdd:pfam01576 132 KIKKLEEDILLLEDQNSKLSK--ERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDL-------EERLKKE--- 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 513 lhtatEKLSKENESLRSKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKgigtdSAEFAELKTQIERLRLDY 592
Cdd:pfam01576 200 -----EKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALAR-----LEEETAQKNNALKKIREL 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 593 QHEIESLQSKQDSERSAHAKEMET---MQAKLMKIIKEKEDSLE--AVKARLDSAEDQHLVEMEDTLnklqEAEIKVKEL 667
Cdd:pfam01576 270 EAQISELQEDLESERAARNKAEKQrrdLGEELEALKTELEDTLDttAAQQELRSKREQEVTELKKAL----EEETRSHEA 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 668 EVLQAKyTEQSEVIGNFTSQLSAVKEKLLDLD----ALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSI 743
Cdd:pfam01576 346 QLQEMR-QKHTQALEELTEQLEQAKRNKANLEkakqALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSES 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 744 TKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLkekfastSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLREN 823
Cdd:pfam01576 425 ERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKL-------SKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDE 497
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 824 LTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGE 903
Cdd:pfam01576 498 RNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNR 577
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 904 VTLKAEQS--QQQAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMLadteDKLK 981
Cdd:pfam01576 578 LQQELDDLlvDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKETRALSLARALEEAL----EAKE 653
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720414365 982 AAQEANRDLMQDMEELKTQADKAKSLTYLLTSAKKEIEVMSEELRGL--KSEKQLYAQEANALKLE 1045
Cdd:pfam01576 654 ELERTNKQLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQleELEDELQATEDAKLRLE 719
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1673-1866 |
3.10e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.61 E-value: 3.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1673 ERAEVLQDNKNLLAEKREMMLRNEEALKEKEKLEESYFILQKEISQLAQTNSHISANLLESQSENRTLRKDKSKLTLKIR 1752
Cdd:COG4942 28 ELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1753 E-------------LETLHSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSK 1819
Cdd:COG4942 108 EllralyrlgrqppLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEER 187
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1720414365 1820 ELLSvenQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGR 1866
Cdd:COG4942 188 AALE---ALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
524-1841 |
3.96e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 49.28 E-value: 3.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 524 NESLRSKLDHANKENSDVIALWKsKLETAIASHQQAMEELKVSFSKGIGTDSAEFAELKTQ---IERLRLDYQHEIESLQ 600
Cdd:TIGR01612 535 KAKLYKEIEAGLKESYELAKNWK-KLIHEIKKELEEENEDSIHLEKEIKDLFDKYLEIDDEiiyINKLKLELKEKIKNIS 613
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 601 SKQDSERSAhakemetmqAKLMKIIKEKEDSLEAVkARLDSAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKYTEQSev 680
Cdd:TIGR01612 614 DKNEYIKKA---------IDLKKIIENNNAYIDEL-AKISPYQVPEHLKNKDKIYSTIKSELSKIYEDDIDALYNELS-- 681
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 681 ignftsqlSAVKEKLLDldalrkaNSEGKLELETLRQQLEGAEKQIKNLETE------RNAESSKANSITKELQEKELVL 754
Cdd:TIGR01612 682 --------SIVKENAID-------NTEDKAKLDDLKSKIDKEYDKIQNMETAtvelhlSNIENKKNELLDIIVEIKKHIH 746
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 755 TGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNklhQKEEQFNVLSSELEKLRENLTDMEAKFKEK 834
Cdd:TIGR01612 747 GEINKDLNKILEDFKNKEKELSNKINDYAKEKDELNKYKSKISEIKN---HYNDQINIDNIKDEDAKQNYDKSKEYIKTI 823
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 835 DDREDQLVKAKEKLENDIAEIMK-----MSGDNS---------SQLTKMNDELRlKERSVEELQLKLTKANENASFLQ-- 898
Cdd:TIGR01612 824 SIKEDEIFKIINEMKFMKDDFLNkvdkfINFENNckekidsehEQFAELTNKIK-AEISDDKLNDYEKKFNDSKSLINei 902
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 899 -KSIGEV------------TLKAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEI 965
Cdd:TIGR01612 903 nKSIEEEyqnintlkkvdeYIKICENTKESIEKFHNKQNILKEILNKNIDTIKESNLIEKSYKDKFDNTLIDKINELDKA 982
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 966 LQNLQkmLADTEDKlkaaqeaNRDLMQDMEELKTQADKAKSLTYLLTSAKKEIEVMSEELRGLKSEKQLYAQEanalkle 1045
Cdd:TIGR01612 983 FKDAS--LNDYEAK-------NNELIKYFNDLKANLGKNKENMLYHQFDEKEKATNDIEQKIEDANKNIPNIE------- 1046
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1046 kgsllsklIEVETKITLLQEDQQKLWSVN-ETLHLE--KERVSEEKQVAEKRYQQEHRDRESLVAERE-KLLKEINAAQE 1121
Cdd:TIGR01612 1047 --------IAIHTSIYNIIDEIEKEIGKNiELLNKEilEEAEINITNFNEIKEKLKHYNFDDFGKEENiKYADEINKIKD 1118
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1122 ELLKMHMEND----SLEASKVSMQVLIEELRFCKDKLMAMSEKArAEKEHLEGQVKKLtaENLVLVKDKD----DVIQKL 1193
Cdd:TIGR01612 1119 DIKNLDQKIDhhikALEEIKKKSENYIDEIKAQINDLEDVADKA-ISNDDPEEIEKKI--ENIVTKIDKKkniyDEIKKL 1195
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1194 QSAYEELVKDQ------------------------------------KALVQEIEDLTTEKKSAAEKQMSLdNTCLTLKA 1237
Cdd:TIGR01612 1196 LNEIAEIEKDKtsleevkginlsygknlgklflekideekkksehmiKAMEAYIEDLDEIKEKSPEIENEM-GIEMDIKA 1274
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1238 ERENLLQTNRDLQFEKDTLRQGQEKLSASLEATLQVKQLLSTEAEtlrtqLDCASKALRKAELDMrqlQTSNSSLTKLLE 1317
Cdd:TIGR01612 1275 EMETFNISHDDDKDHHIISKKHDENISDIREKSLKIIEDFSEESD-----INDIKKELQKNLLDA---QKHNSDINLYLN 1346
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1318 EIKTCRAITDSECIQLLHE--KESLAASERTLLAEKEELLSenriiTEKLSKQSEEVARLEMgLNEKITYLTSEKEVAcQ 1395
Cdd:TIGR01612 1347 EIANIYNILKLNKIKKIIDevKEYTKEIEENNKNIKDELDK-----SEKLIKKIKDDINLEE-CKSKIESTLDDKDID-E 1419
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1396 KVAKLKKQQDSLLKEKSalelQNGDLLADRESSIKTIGDLRRKYDQEATNRRIVMQ-EKMKLLGNIDALKKELQERKKEn 1474
Cdd:TIGR01612 1420 CIKKIKELKNHILSEES----NIDTYFKNADENNENVLLLFKNIEMADNKSQHILKiKKDNATNDHDFNINELKEHIDK- 1494
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1475 qeltSSKCDlslllKEAQDAKKNLEKEHTSMIQAKDNLNAELKTcccEKNMLLRDGLN-LQEECQKLNEEIREIQQTLIL 1553
Cdd:TIGR01612 1495 ----SKGCK-----DEADKNAKAIEKNKELFEQYKKDVTELLNK---YSALAIKNKFAkTKKDSEIIIKEIKDAHKKFIL 1562
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1554 ekearakESETSLYENNKLHGRVVLLEEEIQRLRVCSE-----QLQTENFTLTQEK-TNSEQKVEEIIKEKELLSAETAQ 1627
Cdd:TIGR01612 1563 -------EAEKSEQKIKEIKKEKFRIEDDAAKNDKSNKaaidiQLSLENFENKFLKiSDIKKKINDCLKETESIEKKISS 1635
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1628 LAAN-------------------IETLKSDFAALSKSKLELQELHSCLTKILDDL---RLNHEVALTERAevlqdnknll 1685
Cdd:TIGR01612 1636 FSIDsqdtelkengdnlnslqefLESLKDQKKNIEDKKKELDELDSEIEKIEIDVdqhKKNYEIGIIEKI---------- 1705
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1686 aekremmlrNEEALKEKEKLEESYFILQKEISQLAqtnSHISANLLESQSENRTLRKDKSKLTLKIRELETLHSFTAAqt 1765
Cdd:TIGR01612 1706 ---------KEIAIANKEEIESIKELIEPTIENLI---SSFNTNDLEGIDPNEKLEEYNTEIGDIYEEFIELYNIIAG-- 1771
|
1370 1380 1390 1400 1410 1420 1430
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720414365 1766 aedamqIMEQMTKEKTetlaSLEDTKQTNARLQNELdtlkennLKTVEELNKSKELLsvENQKMEEFKKEIETLKQ 1841
Cdd:TIGR01612 1772 ------CLETVSKEPI----TYDEIKNTRINAQNEF-------LKIIEIEKKSKSYL--DDIEAKEFDRIINHFKK 1828
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
740-1321 |
4.90e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.48 E-value: 4.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 740 ANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEK 819
Cdd:TIGR04523 28 ANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSK 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 820 LRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQK 899
Cdd:TIGR04523 108 INSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQK 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 900 SIGEVTLKAEQSQQ-----QAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMLA 974
Cdd:TIGR04523 188 NIDKIKNKLLKLELllsnlKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKK 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 975 DTEDKLKAAQEANRDLMQDMEELKT------------QADKAKSLTYLLTSAKKEIEVMSEELRG-------LKSEKQLY 1035
Cdd:TIGR04523 268 QLSEKQKELEQNNKKIKELEKQLNQlkseisdlnnqkEQDWNKELKSELKNQEKKLEEIQNQISQnnkiisqLNEQISQL 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1036 AQEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSVNETLHLEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKE 1115
Cdd:TIGR04523 348 KKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKE 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1116 INAAQEELLKMHMENDSLEASKVSMQVLIEELRFCKD----KLMAMSEKARAEKEHLEGQVKKLTAENLVLVKDKDDVIQ 1191
Cdd:TIGR04523 428 IERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTREsletQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKE 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1192 kLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAE--RENLLQTNRDLQFEKDTLRQGQEKLSASLEA 1269
Cdd:TIGR04523 508 -LEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFElkKENLEKEIDEKNKEIEELKQTQKSLKKKQEE 586
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720414365 1270 TLQVKQLLSTE--------------AETLRTQLDCASKALRKAELDMRQLQTSNSSLTKLLEEIKT 1321
Cdd:TIGR04523 587 KQELIDQKEKEkkdlikeieekekkISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKE 652
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
334-540 |
5.08e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.98 E-value: 5.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 334 LHVLELEAKMDQLRTMVEAadREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARTKELEQSLLFEKTKA 413
Cdd:PTZ00121 1600 LYEEEKKMKAEEAKKAEEA--KIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKA 1677
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 414 DKLQRELEDTRVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKPPGDVDMSLSLLQEiSALQEKLEAIHTDHQGEMT 493
Cdd:PTZ00121 1678 EEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKK-EAEEDKKKAEEAKKDEEEK 1756
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1720414365 494 SLKEHFGAREEAFQKEIKALHTAT--EKLSKENESLRSKLDHANKENSD 540
Cdd:PTZ00121 1757 KKIAHLKKEEEKKAEEIRKEKEAVieEELDEEDEKRRMEVDKKIKDIFD 1805
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
415-878 |
1.17e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 47.64 E-value: 1.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 415 KLQRELEDTRVATVSEKSRIMELEKDLAlraqEVAELRRRLESskppgDVDMS---LSLLQEISALQEKLEAIHTDhQGE 491
Cdd:COG3096 289 ELRRELFGARRQLAEEQYRLVEMARELE----ELSARESDLEQ-----DYQAAsdhLNLVQTALRQQEKIERYQED-LEE 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 492 MTS-LKEHFGAREEAfQKEIKALHTATEKLSKENESLRSKLdhankensdvialwkskletaiASHQQAMEELkvsfskg 570
Cdd:COG3096 359 LTErLEEQEEVVEEA-AEQLAEAEARLEAAEEEVDSLKSQL----------------------ADYQQALDVQ------- 408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 571 igtdsaefaelktqiERLRLDYQheiESLQSKQDSERSAHAKEMETMQAklmkiikekEDSLEAVKARLDSAeDQHLVEM 650
Cdd:COG3096 409 ---------------QTRAIQYQ---QAVQALEKARALCGLPDLTPENA---------EDYLAAFRAKEQQA-TEEVLEL 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 651 EDTLNKLQEAEI---KVKELEVLQAKYTEQSEVIGNFTSQLSAVKEklLDLDALRKANSEGKL-ELETLRQQLEGAEKQI 726
Cdd:COG3096 461 EQKLSVADAARRqfeKAYELVCKIAGEVERSQAWQTARELLRRYRS--QQALAQRLQQLRAQLaELEQRLRQQQNAERLL 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 727 KNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEA---VSAQTRMQDTVNKL 803
Cdd:COG3096 539 EEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARApawLAAQDALERLREQS 618
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720414365 804 HQKEEQFNVLSSELEKLRENLTDMEAKfkekddrEDQLVKAKEKLENDIAEIMKMSGDNSSQLtkmndeLRLKER 878
Cdd:COG3096 619 GEALADSQEVTAAMQQLLEREREATVE-------RDELAARKQALESQIERLSQPGGAEDPRL------LALAER 680
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1687-1946 |
1.22e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.22 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1687 EKREMMLRNEEALKEKEKLEESYFILQKEISQLAQtnshisanLLESQSENRTLRKDKSKLTLKIRELETLHSFTAAQTA 1766
Cdd:COG4913 219 EEPDTFEAADALVEHFDDLERAHEALEDAREQIEL--------LEPIRELAERYAAARERLAELEYLRAALRLWFAQRRL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1767 EDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKEnnlktveelnkskELLSVENQKMEEFKKEIETLKQAAAQK 1846
Cdd:COG4913 291 ELLEAELEELRAELARLEAELERLEARLDALREELDELEA-------------QIRGNGGDRLEQLEREIERLERELEER 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1847 SQQLSALQEenvkLAEELGrtrdevtshQKLEEERSVLNNQLLEMKkslpsntlresEFRKDADEEKASLQKSISLTSAL 1926
Cdd:COG4913 358 ERRRARLEA----LLAALG---------LPLPASAEEFAALRAEAA-----------ALLEALEEELEALEEALAEAEAA 413
|
250 260
....*....|....*....|
gi 1720414365 1927 LTEKDAELEKLRNEVTVLRG 1946
Cdd:COG4913 414 LRDLRRELRELEAEIASLER 433
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1536-2038 |
1.24e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1536 ECQKLNEEIREIQQTLILEKEARAKESETSLYENNKLHGRVVLLEEEIQRLRVCSEQLQTENFTLTQEKTNSEQ--KVEE 1613
Cdd:PTZ00121 1221 EDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEakKAEE 1300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1614 IIKEKELlsAETAQLAANIETLKSDfAALSKSKLELQELHSCLTKILDDLRLNHEVALTERAEVLQDNKNLLAEKREMML 1693
Cdd:PTZ00121 1301 KKKADEA--KKKAEEAKKADEAKKK-AEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAK 1377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1694 RNEEALKEKEKLEESYFILQKEISQLAQTNSHI---------SANLLESQSENRTLRKDKSKLTLKIRELETLHSFTAAQ 1764
Cdd:PTZ00121 1378 KKADAAKKKAEEKKKADEAKKKAEEDKKKADELkkaaaakkkADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAK 1457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1765 TAEDAMQIMEQM-----TKEKTETLASLEDTKQTNARLQNELDTLKE--------NNLKTVEELNKSKELLSVEN-QKME 1830
Cdd:PTZ00121 1458 KAEEAKKKAEEAkkadeAKKKAEEAKKADEAKKKAEEAKKKADEAKKaaeakkkaDEAKKAEEAKKADEAKKAEEaKKAD 1537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1831 EFKKEIETLKQAAAQKSQQLSalQEENVKLAEELGRT-RDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESEFRKDA 1909
Cdd:PTZ00121 1538 EAKKAEEKKKADELKKAEELK--KAEEKKKAEEAKKAeEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKA 1615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1910 DEEKAslqKSISLTSALLTEKDAELEKLRNEVTVLRGENATAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSS 1989
Cdd:PTZ00121 1616 EEAKI---KAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAE 1692
|
490 500 510 520
....*....|....*....|....*....|....*....|....*....
gi 1720414365 1990 SgnTDAQAEEDERAQESQQMIDFLNSVIVDLQRKNQDLKMKVEMMSEAA 2038
Cdd:PTZ00121 1693 A--LKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEA 1739
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1080-1299 |
1.26e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 1.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1080 EKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEELLKMHMENDSLEASKVSMQVLIEELRfckdklmamsE 1159
Cdd:COG4942 28 ELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR----------A 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1160 KARAEKEHLEGQVKKL----TAENLVLVKDKDDVIQKLQSA--YEELVKDQKalvQEIEDLTTEKKSAAEKQMSLDNTCL 1233
Cdd:COG4942 98 ELEAQKEELAELLRALyrlgRQPPLALLLSPEDFLDAVRRLqyLKYLAPARR---EQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720414365 1234 TLKAERENLLQTNRDLQFEKDTLRQGQEKLSASLEATLQVKQLLSTEAETLRTQLDCASKALRKAE 1299
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
335-652 |
1.58e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.98 E-value: 1.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 335 HVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARTKELEQSLLFEKTKAD 414
Cdd:TIGR02169 703 RLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALN 782
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 415 KLQRELEDTRVATVSEKSRIMElekdlalraQEVAELRRRLEsskppgDVDMSLSLLQEISALQEKLEAIHTDHQGEMTS 494
Cdd:TIGR02169 783 DLEARLSHSRIPEIQAELSKLE---------EEVSRIEARLR------EIEQKLNRLTLEKEYLEKEIQELQEQRIDLKE 847
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 495 LKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIAlWKSKLETAIASHQQAMEELKVSFSKGIGTD 574
Cdd:TIGR02169 848 QIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEA-QLRELERKIEELEAQIEKKRKRLSELKAKL 926
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 575 SAEFAELKtQIERLRLDYQHEIESLQSKQD--SERSAHAKEMETMQAKLMKIIKEKEDsleaVKARLDSAEDQHLVEMED 652
Cdd:TIGR02169 927 EALEEELS-EIEDPKGEDEEIPEEELSLEDvqAELQRVEEEIRALEPVNMLAIQEYEE----VLKRLDELKEKRAKLEEE 1001
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
2063-2080 |
1.84e-04 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 40.14 E-value: 1.84e-04
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1532-1938 |
2.01e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 46.43 E-value: 2.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1532 NLQEECQKlneEIREIQQTLILEKEARAKESETSLYENNKLHGRVVLLEEEIQRLRVCSEQLQTENFTLTQEKTNSEQKV 1611
Cdd:pfam07888 34 NRLEECLQ---ERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1612 EEIIKEKELLSAETAQLAANIETLKSDFAALSKSKLELQelhscltkilddlrlnhevalTERAEVLQDNKNLLAEKREm 1691
Cdd:pfam07888 111 EELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERE---------------------TELERMKERAKKAGAQRKE- 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1692 mlrnEEAlkEKEKLEESYFILQKEISQLAQTNSHISANLLESQSENRTLRKDKSKLTLKireLETLHSFTAAqtaedamq 1771
Cdd:pfam07888 169 ----EEA--ERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQK---LTTAHRKEAE-------- 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1772 iMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSK-ELLSVENQKMEEFKKeietLKQAAAQKSQQL 1850
Cdd:pfam07888 232 -NEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDRTQAELHQARlQAAQLTLQLADASLA----LREGRARWAQER 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1851 SALQEENVKLAEELGRTRDEVTSHQK-LEEERSVLNNQLLEMKKSLPSNTLRESEFRKDADEEKASLQKSISLTSALLTE 1929
Cdd:pfam07888 307 ETLQQSAEADKDRIEKLSAELQRLEErLQEERMEREKLEVELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAE 386
|
....*....
gi 1720414365 1930 KDAELEKLR 1938
Cdd:pfam07888 387 KQELLEYIR 395
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1580-1947 |
2.02e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.60 E-value: 2.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1580 EEEIQRLRVCSEQLQTENFTLTQEKtnsEQKVEEIIKEKELLSAETAQLAANIETLKSDFAALSKSKLELQELHSCLTKI 1659
Cdd:TIGR02169 183 EENIERLDLIIDEKRQQLERLRRER---EKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEE 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1660 LDDLRLNHEVALTERAEVlqdnknllaEKREMMLRNEEALKEKEKLEESYfilqkeiSQLAQTNSHISANLLESQSENRT 1739
Cdd:TIGR02169 260 ISELEKRLEEIEQLLEEL---------NKKIKDLGEEEQLRVKEKIGELE-------AEIASLERSIAEKERELEDAEER 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1740 LRKDKSKLTLKIRELETLHsftaaqtaedamQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSK 1819
Cdd:TIGR02169 324 LAKLEAEIDKLLAEIEELE------------REIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYR 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1820 EllsvenqKMEEFKKEIETLKQaaaqksqQLSALQEENVKLAEELGRTRDEVTS----HQKLEEERSVLNNQLLEMKKSL 1895
Cdd:TIGR02169 392 E-------KLEKLKREINELKR-------ELDRLQEELQRLSEELADLNAAIAGieakINELEEEKEDKALEIKKQEWKL 457
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1720414365 1896 PSNtlreSEFRKDADEEKASLQKSISLTSALLTEKDAELEKLRNEVTVLRGE 1947
Cdd:TIGR02169 458 EQL----AADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEER 505
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1696-1879 |
2.07e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.30 E-value: 2.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1696 EEALKEKEKLEESYFILQKEISQLAQtnshisanllesqsENRTLRKDKSKLTLKIRELETLHsftAAQTAEDAMQIMEQ 1775
Cdd:COG4717 77 EEELKEAEEKEEEYAELQEELEELEE--------------ELEELEAELEELREELEKLEKLL---QLLPLYQELEALEA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1776 MTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQK-MEEFKKEIETLKQAAAQKSQQLSALQ 1854
Cdd:COG4717 140 ELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEeLQDLAEELEELQQRLAELEEELEEAQ 219
|
170 180
....*....|....*....|....*
gi 1720414365 1855 EENVKLAEELGRTRDEVTSHQKLEE 1879
Cdd:COG4717 220 EELEELEEELEQLENELEAAALEER 244
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1190-1653 |
2.86e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 2.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1190 IQKLQSAYEELVKDQ----KALVQEIEDLTTEKKSAAEKQmsldntcltlkAERENLLQTNRDLQFEKDTLRQGQEKLSA 1265
Cdd:COG4717 48 LERLEKEADELFKPQgrkpELNLKELKELEEELKEAEEKE-----------EEYAELQEELEELEEELEELEAELEELRE 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1266 SLEATLQVKQLLST--EAETLRTQLDCASKALRKAELDMRQLQTSNSSLTKLLEEIKTCRAITDSECIQLLHEKEslaAS 1343
Cdd:COG4717 117 ELEKLEKLLQLLPLyqELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATE---EE 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1344 ERTLLAEKEELLSENRIITEKLSKQSEEVARLEmglnEKITYLTSEKEVAcQKVAKLKKQQDSLLKEKSALELQ-NGDLL 1422
Cdd:COG4717 194 LQDLAEELEELQQRLAELEEELEEAQEELEELE----EELEQLENELEAA-ALEERLKEARLLLLIAAALLALLgLGGSL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1423 ADRESSIKTIGDL-------------RRKYDQEATNRRIVMQEKMKLLGNIDaLKKELQERKKENQELTSSKCDLSLLLK 1489
Cdd:COG4717 269 LSLILTIAGVLFLvlgllallflllaREKASLGKEAEELQALPALEELEEEE-LEELLAALGLPPDLSPEELLELLDRIE 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1490 EAQDAKKNLEKEHTSM--IQAKDNLNAELKTCCCEKNMLLRDGLNLQEECQKLNEEIREIQQTLILEKEARAKESETSLY 1567
Cdd:COG4717 348 ELQELLREAEELEEELqlEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDE 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1568 ENnkLHGRVVLLEEEIQRLRVCSEQLQTENFTLTQEKTN--SEQKVEEIIKEKELLSAETAQLAANIETLKSDFAALSKS 1645
Cdd:COG4717 428 EE--LEEELEELEEELEELEEELEELREELAELEAELEQleEDGELAELLQELEELKAELRELAEEWAALKLALELLEEA 505
|
....*...
gi 1720414365 1646 KLELQELH 1653
Cdd:COG4717 506 REEYREER 513
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1525-1955 |
3.09e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 3.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1525 MLLRDGLNLQEECQKLNEEIREIQQTLILEKEARAKESETSLYENNKLHGRVVLLEEEIQRLRVCSEQLQTENFTLTQEK 1604
Cdd:COG4717 46 MLLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1605 TNSE--QKVEEIIKEKELLSAETAQLAANIETLKSDFAALSKSKLELQELHSCLTKILDDLRLNHEVAL----TERAEVL 1678
Cdd:COG4717 126 QLLPlyQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELqdlaEELEELQ 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1679 QDNKNLLAEKREMMLRNEEALKEKEKLEESYFILQ-----KEISQLAQTNSHISANLLESQSENRTLRKDKSKLTLKIRE 1753
Cdd:COG4717 206 QRLAELEEELEEAQEELEELEEELEQLENELEAAAleerlKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1754 LETLHSFTAAQTAEDAMQIMEQMTKEKTETLASLEdtkqtnarLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFK 1833
Cdd:COG4717 286 LALLFLLLAREKASLGKEAEELQALPALEELEEEE--------LEELLAALGLPPDLSPEELLELLDRIEELQELLREAE 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1834 KEIETLKQAAAQKSQQlSALQEENVKLAEELGRTRDEVTSHQKLEEERSVLNNQLLEMKKSLpsNTLRESEFRKDADEEK 1913
Cdd:COG4717 358 ELEEELQLEELEQEIA-ALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGEL--EELLEALDEEELEEEL 434
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1720414365 1914 ASLQKSISLTSALLTEKDAELEKLRNEVTVLRGENATAKSLH 1955
Cdd:COG4717 435 EELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQ 476
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
507-1186 |
3.29e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.87 E-value: 3.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 507 QKEIKALHTATEKLSKENESLRSKLDHANKENSDVIA------LWKSKLETAIAS----------HQQAMEELKVSFSKG 570
Cdd:pfam05483 112 RKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKennatrHLCNLLKETCARsaektkkyeyEREETRQVYMDLNNN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 571 IGTDSAEFAELKTQIERLRLDYQHEIeslqsKQDSERSAHAKEmetmqaKLMKIIKEKEDSLEAVKARLDSAEDQhlveM 650
Cdd:pfam05483 192 IEKMILAFEELRVQAENARLEMHFKL-----KEDHEKIQHLEE------EYKKEINDKEKQVSLLLIQITEKENK----M 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 651 EDTLNKLQEAEIKVKELEvlqAKYTEQSEVIGNFTSQLSAVKEKLLDLD-ALRKANSEGKleleTLRQQLEGAEKQIKNL 729
Cdd:pfam05483 257 KDLTFLLEESRDKANQLE---EKTKLQDENLKELIEKKDHLTKELEDIKmSLQRSMSTQK----ALEEDLQIATKTICQL 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 730 ETERNAESSKANsitKELQEKELVLTGLQDSLNqvnqvkeTLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQ 809
Cdd:pfam05483 330 TEEKEAQMEELN---KAKAAHSFVVTEFEATTC-------SLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKF 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 810 FNVLSSELEKLRENLTDMEAKFKEKDDRE---DQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLK 886
Cdd:pfam05483 400 KNNKEVELEELKKILAEDEKLLDEKKQFEkiaEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTE 479
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 887 LTKANENASFLQKSIGEVTLKAEQSQQQAArKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEIL 966
Cdd:pfam05483 480 LEKEKLKNIELTAHCDKLLLENKELTQEAS-DMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFI 558
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 967 QNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKSLTYLLTSAKKEIEVMSEELRGLKSE-----KQLYAQE--A 1039
Cdd:pfam05483 559 QKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKgsaenKQLNAYEikV 638
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1040 NALKLEKGSLLSKLIEV----ETKITLLQEDQQKLWSVNETLHLEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKE 1115
Cdd:pfam05483 639 NKLELELASAKQKFEEIidnyQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDK 718
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720414365 1116 INAAQEELLKMHMENDSLEAS-KVSMQVlieELRFCKDKLMAMSEKARAEKEHLEgQVKKLTAENLVLVKDK 1186
Cdd:pfam05483 719 IIEERDSELGLYKNKEQEQSSaKAALEI---ELSNIKAELLSLKKQLEIEKEEKE-KLKMEAKENTAILKDK 786
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1053-2007 |
3.79e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 45.94 E-value: 3.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1053 LIEVETKITLLQEDQQKLWSVNETLHLEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEELLKMHMENDS 1132
Cdd:pfam01576 14 LQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHELESRLEEEEERSQQ 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1133 LEASKVSMQVLIEELRFCKDKLMAMSEKARAEKEHLEGQVKKLTAENLVLvkdkDDVIQKLQsayeelvKDQKALVQEIE 1212
Cdd:pfam01576 94 LQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLL----EDQNSKLS-------KERKLLEERIS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1213 DLTTEKKSAAEKQMSLDNtcltlkaerenllqtnrdlqfekdtLRQGQEKLSASLEATLQVKQLLSTEAETLRTQLDCAS 1292
Cdd:pfam01576 163 EFTSNLAEEEEKAKSLSK-------------------------LKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGES 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1293 KALRKAELDMR-QLQTSNSSLTKLLEEIKTCRAITDSECIQLLHEKESLAASERTLLAEKEELLSEnRIITEKLSKQ--- 1368
Cdd:pfam01576 218 TDLQEQIAELQaQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESE-RAARNKAEKQrrd 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1369 -SEEVARLEMGLNEKITYLTSEKEVACQKVAKLKKQQDSLLKEKSALELQNGDLladRESSIKTIGDLRRKYDQEATNRR 1447
Cdd:pfam01576 297 lGEELEALKTELEDTLDTTAAQQELRSKREQEVTELKKALEEETRSHEAQLQEM---RQKHTQALEELTEQLEQAKRNKA 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1448 IVMQEKMKLLGNIDALKKELQERKKENQELTSSKCDLSLLLKEAQDAKKNLEKEHTSMIQAKDNLNAELKTCCCEKNMLL 1527
Cdd:pfam01576 374 NLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAE 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1528 RDGLNLQEECQKLNEEIREIQQTLILEKEARAKESETSLYENNKLHGRVVLLEEEIQRLRVCSEQLQTenftLTQEKTNS 1607
Cdd:pfam01576 454 GKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLST----LQAQLSDM 529
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1608 EQKVEEIIKEKELLSAETAQLAANIETLKSDFAALSKSKLELQELHSCLTKILDDL--RLNHEVALTERAEVLQDN-KNL 1684
Cdd:pfam01576 530 KKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLlvDLDHQRQLVSNLEKKQKKfDQM 609
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1685 LAEKREMMLRN-------------------------EEALKEKEKLEESYFILQKEISQLAQTNSHISANLLESQSENRT 1739
Cdd:pfam01576 610 LAEEKAISARYaeerdraeaeareketralslaralEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKNVHELERSKRA 689
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1740 LRKDKSKLTLKIRELETlhSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQ-----NELDTLKENNLKTVEE 1814
Cdd:pfam01576 690 LEQQVEEMKTQLEELED--ELQATEDAKLRLEVNMQALKAQFERDLQARDEQGEEKRRQlvkqvRELEAELEDERKQRAQ 767
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1815 LNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVTSHQKLEEERS-VLNNQLLEMKK 1893
Cdd:pfam01576 768 AVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEILAQSKESEKKLkNLEAELLQLQE 847
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1894 SLPSNTLRESEFRKDADEEKASLQKSISLTSALLTEK-------------------DAELEKLRNEVTVLRGENATAK-- 1952
Cdd:pfam01576 848 DLAASERARRQAQQERDELADEIASGASGKSALQDEKrrleariaqleeeleeeqsNTELLNDRLRKSTLQVEQLTTEla 927
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|....*
gi 1720414365 1953 SLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDAQAEEDERAQESQ 2007
Cdd:pfam01576 928 AERSTSQKSESARQQLERQNKELKAKLQEMEGTVKSKFKSSIAALEAKIAQLEEQ 982
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
352-589 |
3.83e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 3.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 352 AADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARTKELEQSLLFEKTKADKLQRELEDTRVATVSEK 431
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 432 SRIMELEKDLA--LRAQEVAELRRRLE---SSKPPGDVDMSLSLLQEIS-ALQEKLEAIHTDHQgemtslkehfgaREEA 505
Cdd:COG4942 97 AELEAQKEELAelLRALYRLGRQPPLAlllSPEDFLDAVRRLQYLKYLApARREQAEELRADLA------------ELAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 506 FQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIAlwksKLETAIASHQQAMEELKvsfskgigtdsAEFAELKTQI 585
Cdd:COG4942 165 LRAELEAERAELEALLAELEEERAALEALKAERQKLLA----RLEKELAELAAELAELQ-----------QEAEELEALI 229
|
....
gi 1720414365 586 ERLR 589
Cdd:COG4942 230 ARLE 233
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
838-1275 |
3.92e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.53 E-value: 3.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 838 EDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGE----VTLKAEQSQQ 913
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEElreeLEKLEKLLQL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 914 QAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQD 993
Cdd:COG4717 128 LPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQR 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 994 MEELKTQADKAKSltyLLTSAKKEIEVMSEELRGLKSEKQLYAQEAN--------ALKLEKGSLLSKLIEVETKITLLQE 1065
Cdd:COG4717 208 LAELEEELEEAQE---ELEELEEELEQLENELEAAALEERLKEARLLlliaaallALLGLGGSLLSLILTIAGVLFLVLG 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1066 DQQKLWSVNETLHLEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEELLKMHMENDSLEASKVSM--QVL 1143
Cdd:COG4717 285 LLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELeeELQ 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1144 IEELRFCKDKLMAMS------------------EKARAEKEHLEGQVKKLTAENLVLVKDKDDviQKLQSAYEELVKDQK 1205
Cdd:COG4717 365 LEELEQEIAALLAEAgvedeeelraaleqaeeyQELKEELEELEEQLEELLGELEELLEALDE--EELEEELEELEEELE 442
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720414365 1206 ALVQEIEDLTTEKKSAAE--KQMSLDNTCLTLKAERENLLQTNRDLQFEKDTLRQGQEKLSASLEATLQVKQ 1275
Cdd:COG4717 443 ELEEELEELREELAELEAelEQLEEDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREERL 514
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1542-1976 |
4.08e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.80 E-value: 4.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1542 EEIREIQQTLILEKEARAKESETSLYENNKLHGRVVLLEEEIQRLRVCSEQLQTENFTLTQEKTNSEQKVEEIIKEKELL 1621
Cdd:PRK02224 289 EELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAEL 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1622 SAETAQLAANIETLKSDFAALSKSKLELQELHSCLTKILDDLRLNHEVALTERAEVLQDNKNLLAEKREMMLRNEEA--L 1699
Cdd:PRK02224 369 ESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAeaL 448
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1700 KEKEKLEESYFILqkEISQLAQTNSHISANLLESQSENRTLRKDKSKLTLKIRELETLHSFTA--------AQTAEDAMQ 1771
Cdd:PRK02224 449 LEAGKCPECGQPV--EGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDrierleerREDLEELIA 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1772 IMEQMTKEKTETLASLEDTKQtnaRLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQ------AAAQ 1845
Cdd:PRK02224 527 ERRETIEEKRERAEELRERAA---ELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERirtllaAIAD 603
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1846 KSQQLSALQEENVKLAEELGRTRDEVTS----HQKLEEERSVLNNQLLEMKKSLPSNTLRESEFRKDA-DEEKASLQKSI 1920
Cdd:PRK02224 604 AEDEIERLREKREALAELNDERRERLAEkrerKRELEAEFDEARIEEAREDKERAEEYLEQVEEKLDElREERDDLQAEI 683
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414365 1921 sltsALLTEKDAELEKLRNEVTVLRGENATAKSLHSVVQTLES--DKVKLELKVKNLE 1976
Cdd:PRK02224 684 ----GAVENELEELEELRERREALENRVEALEALYDEAEELESmyGDLRAELRQRNVE 737
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1283-1993 |
4.80e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 45.45 E-value: 4.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1283 TLRTQLDCASKALRKAeldmRQLQTSNSSLTKLLEEIKTCRAItdseciqllHEKESLAASE-----RTLLAEKEELlsE 1357
Cdd:COG5022 759 YLRRRYLQALKRIKKI----QVIQHGFRLRRLVDYELKWRLFI---------KLQPLLSLLGsrkeyRSYLACIIKL--Q 823
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1358 NRIITEKLSKQSEEVARLEMGLNEKITYLTSEKevacqkvakLKKQQDSLLKEKSALELQNGDLLADRESSIKTIGDLRR 1437
Cdd:COG5022 824 KTIKREKKLRETEEVEFSLKAEVLIQKFGRSLK---------AKKRFSLLKKETIYLQSAQRVELAERQLQELKIDVKSI 894
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1438 KY--------DQEAT----NRRIVMQEKMKLLGNIDA-LKKELQERKKENQ---ELTSSKCDLSLL-----LKEAQDAKK 1496
Cdd:COG5022 895 SSlklvnlelESEIIelkkSLSSDLIENLEFKTELIArLKKLLNNIDLEEGpsiEYVKLPELNKLHeveskLKETSEEYE 974
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1497 NLEKEHTSMIQAKDNLNAELKTCCCEKNMLLRDGLNLQEECQKLNEEIREIQQtlILEKEARAKESETSLYENNKLHGRV 1576
Cdd:COG5022 975 DLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAE--LQSASKIISSESTELSILKPLQKLK 1052
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1577 VLLEEEIQRLRVCSEQLQTEN--------FTLTQEKTNSEQKVeeiIKEKELLSAETaQLAANIETLKSDFAALSKSKLE 1648
Cdd:COG5022 1053 GLLLLENNQLQARYKALKLRRensllddkQLYQLESTENLLKT---INVKDLEVTNR-NLVKPANVLQFIVAQMIKLNLL 1128
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1649 LQELHSCLTKILDdlrlnhevalteraevLQDNKNLLAEKREMMLRNEEALKEKEKLEESYFILQKEISQLAqtNSHISA 1728
Cdd:COG5022 1129 QEISKFLSQLVNT----------------LEPVFQKLSVLQLELDGLFWEANLEALPSPPPFAALSEKRLYQ--SALYDE 1190
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1729 NLLESQSENRTLRKDKSKLTLKIRELETLHSFTAAQTAEdAMQIMEQMTKEKTETLASLEDTKQTNarlqneldtlkENN 1808
Cdd:COG5022 1191 KSKLSSSEVNDLKNELIALFSKIFSGWPRGDKLKKLISE-GWVPTEYSTSLKGFNNLNKKFDTPAS-----------MSN 1258
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1809 LKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENV--KLAEELGRTRDEVtSHQKLEEERSVLNN 1886
Cdd:COG5022 1259 EKLLSLLNSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRTKASSLrwKSATEVNYNSEEL-DDWCREFEISDVDE 1337
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1887 QLLEMKKSLPSNTLRESEfrkdadeekasLQKSISLTSALLTEKDAELEKLRNEVTVLRGENATAKslhSVVQTLESDKV 1966
Cdd:COG5022 1338 ELEELIQAVKVLQLLKDD-----------LNKLDELLDACYSLNPAEIQNLKSRYDPADKENNLPK---EILKKIEALLI 1403
|
730 740
....*....|....*....|....*..
gi 1720414365 1967 KLELKVKNLELQLKENKRQLSSSSGNT 1993
Cdd:COG5022 1404 KQELQLSLEGKDETEVHLSEIFSEEKS 1430
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
769-887 |
6.11e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 44.85 E-value: 6.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 769 ETLEKELQTLKEKfaSTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDR----EDQLVKA 844
Cdd:COG2433 376 LSIEEALEELIEK--ELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERierlERELSEA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1720414365 845 KEKLENDI---AEIMKMSGDNsSQLTKmndELRLKERSVEELQLKL 887
Cdd:COG2433 454 RSEERREIrkdREISRLDREI-ERLER---ELEEERERIEELKRKL 495
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1672-2032 |
6.39e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.03 E-value: 6.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1672 TERAEVLQDNKNLLAEKREMMLRNEEALKEKEKLEESyfilQKEISQLAQTNSHISANLLESQSENRTLRKDKSKLTLKI 1751
Cdd:PRK02224 213 SELAELDEEIERYEEQREQARETRDEADEVLEEHEER----REELETLEAEIEDLRETIAETEREREELAEEVRDLRERL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1752 RELETLHSFTAAQT------AEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVE------------ 1813
Cdd:PRK02224 289 EELEEERDDLLAEAglddadAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEEraeelreeaael 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1814 --ELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVTSHQ-KLEEERSVL--NNQL 1888
Cdd:PRK02224 369 esELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEaTLRTARERVeeAEAL 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1889 LEMKKSLPSNTLRESEFRKDADEEKaslqksisltSALLTEKDAELEKLRNEVTVLRGENATAKSLHSVVQTLESDKVKL 1968
Cdd:PRK02224 449 LEAGKCPECGQPVEGSPHVETIEED----------RERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERR 518
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720414365 1969 ELKVKNLELQ---LKENKRQLSSS---SGNTDAQAEE-DERAQESQQMIDFLNSVIVDLQRKNQDLKMKVE 2032
Cdd:PRK02224 519 EDLEELIAERretIEEKRERAEELrerAAELEAEAEEkREAAAEAEEEAEEAREEVAELNSKLAELKERIE 589
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1533-1732 |
6.88e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 6.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1533 LQEECQKLNEEIREIQQTLILEKEARAKESETslyennklhgRVVLLEEEIQRLRVCSEQLQTENFTLTQEKTNSEQKVE 1612
Cdd:COG4913 257 IRELAERYAAARERLAELEYLRAALRLWFAQR----------RLELLEAELEELRAELARLEAELERLEARLDALREELD 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1613 EIikEKELLSAETAQlaanIETLKSDFAALSKSKLELQELHSCLTKILDDLRL---NHEVALTERAEVLQDNKNLLAEKR 1689
Cdd:COG4913 327 EL--EAQIRGNGGDR----LEQLEREIERLERELEERERRRARLEALLAALGLplpASAEEFAALRAEAAALLEALEEEL 400
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1720414365 1690 EmMLRNE--EALKEKEKLEESYFILQKEISQLAQTNSHISANLLE 1732
Cdd:COG4913 401 E-ALEEAlaEAEAALRDLRRELRELEAEIASLERRKSNIPARLLA 444
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
338-784 |
6.92e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.76 E-value: 6.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 338 ELEAKMDQLrtmvEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLE--HARTKELEQSLLFEKTKADK 415
Cdd:COG4717 75 ELEEELKEA----EEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLplYQELEALEAELAELPERLEE 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 416 LQRELEDTRvatvseksrimELEKDLALRAQEVAELRRRLESSKppgdVDMSLSLLQEISALQEKLEAIHtdhqgemtsl 495
Cdd:COG4717 151 LEERLEELR-----------ELEEELEELEAELAELQEELEELL----EQLSLATEEELQDLAEELEELQ---------- 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 496 kehfgAREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSK------ 569
Cdd:COG4717 206 -----QRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTiagvlf 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 570 ---GIGTDSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQH 646
Cdd:COG4717 281 lvlGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELE 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 647 ----LVEMEDTLNKLQeAEIKVKELEVLQAKYTEQSEVIgNFTSQLSAVKEKLLDLDALRKANSEgKLELETLRQQLEGA 722
Cdd:COG4717 361 eelqLEELEQEIAALL-AEAGVEDEEELRAALEQAEEYQ-ELKEELEELEEQLEELLGELEELLE-ALDEEELEEELEEL 437
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720414365 723 EKQIKNLETERNAESSKANSITKELQEKElvltgLQDSLNQVNQVKETLEKELQTLKEKFAS 784
Cdd:COG4717 438 EEELEELEEELEELREELAELEAELEQLE-----EDGELAELLQELEELKAELRELAEEWAA 494
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1789-2065 |
7.01e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 45.07 E-value: 7.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1789 DTKQTNARLQNELDTLKENNLKTVEELNKSKELLSvenqkmEEFKKEIETLKQAAAQKSQQLSALQEENVKLAE-ELGRT 1867
Cdd:COG5022 814 SYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLI------QKFGRSLKAKKRFSLLKKETIYLQSAQRVELAErQLQEL 887
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1868 RDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESEFRKDADEEKASLQKSISLTSALLTE--KDAELEKLRNEVTVLR 1945
Cdd:COG5022 888 KIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEFKTELIARLKKLLNNIDLEEGPSIEyvKLPELNKLHEVESKLK 967
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1946 GENATAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDAQAEEDERAQESQQMIDFLNSVIVDLQRKNQ 2025
Cdd:COG5022 968 ETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKIISSESTELSILKP 1047
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1720414365 2026 DLKMKVEMMSEA-ALNGNGEDL-----NSYDSDDQEKQSKKKPRLF 2065
Cdd:COG5022 1048 LQKLKGLLLLENnQLQARYKALklrreNSLLDDKQLYQLESTENLL 1093
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1079-1289 |
7.48e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 7.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1079 LEKERVSEEKQVAEKRYQQEHRDRESLVAEREK--LLKEINAAQEELLKMHMENDSLEASKVSMQVLIEELRFckDKLMA 1156
Cdd:COG4913 218 LEEPDTFEAADALVEHFDDLERAHEALEDAREQieLLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRL--ELLEA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1157 MSEKARAEKEHLEGQVKKLTAEnlvlVKDKDDVIQKLQSAYEELVKDQKA-LVQEIEDLTTEKKSAAEKQMSLDNTC--- 1232
Cdd:COG4913 296 ELEELRAELARLEAELERLEAR----LDALREELDELEAQIRGNGGDRLEqLEREIERLERELEERERRRARLEALLaal 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414365 1233 -LTLKAERENLLQTNRDLQFEKDTLRQGQEKLSASLEATLQVKQLLSTEAETLRTQLD 1289
Cdd:COG4913 372 gLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIA 429
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
960-1492 |
8.93e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 44.33 E-value: 8.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 960 TKHEEILQNLQKMLADTEDKLKAAQEANRdlMQDmEELKTQADKAKSLTYLLTSAKKEIEVMSEELRGLKSEKQLYAQEA 1039
Cdd:pfam05483 250 TEKENKMKDLTFLLEESRDKANQLEEKTK--LQD-ENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTI 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1040 NALKLEKGSLLSKLIEVETKITLL-QEDQQKLWSVNETLHLEKERVsEEKQVAEKRYQQEHRDRESLVAEREKLLKEINA 1118
Cdd:pfam05483 327 CQLTEEKEAQMEELNKAKAAHSFVvTEFEATTCSLEELLRTEQQRL-EKNEDQLKIITMELQKKSSELEEMTKFKNNKEV 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1119 AQEELLKMHMENDSLEASKVSMQVLIEELRFCKDKLMAMSEKARAEKEHLEGQVKKLTAENLVLVKDKDDVIQKLQ---- 1194
Cdd:pfam05483 406 ELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEkekl 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1195 ------SAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENLLQTNRDLQFEKDTLRQGQEKLSASLE 1268
Cdd:pfam05483 486 knieltAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVK 565
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1269 ATLQVKQLLSTEAETLRTQLDCASKALRKAELDMR-QLQTSNSSLTKLLEEIKTCRAITDSECIQLLHEKESLAASERTL 1347
Cdd:pfam05483 566 CKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKkQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELEL 645
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1348 LAEKEELLSenriITEKLSKQSEEVARLEMGLNEKItyltSEKEVACQKVAKLKKQQDSLLKEKSALEL--------QNG 1419
Cdd:pfam05483 646 ASAKQKFEE----IIDNYQKEIEDKKISEEKLLEEV----EKAKAIADEAVKLQKEIDKRCQHKIAEMValmekhkhQYD 717
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720414365 1420 DLLADRESSIktigDLRRKYDQEATNRRIVMQEKMKLLGN-IDALKKELQERKKENQELTSSKCDLSLLLKEAQ 1492
Cdd:pfam05483 718 KIIEERDSEL----GLYKNKEQEQSSAKAALEIELSNIKAeLLSLKKQLEIEKEEKEKLKMEAKENTAILKDKK 787
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
612-1096 |
1.05e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.19 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 612 KEMETMQAKLMKIIKEKEDSLEAVKARLDSAED---QHLVEMEDTlnklQEAEIKVKELEVLQAKYTEQSEVIGNFTSQ- 687
Cdd:TIGR00618 388 KTTLTQKLQSLCKELDILQREQATIDTRTSAFRdlqGQLAHAKKQ----QELQQRYAELCAAAITCTAQCEKLEKIHLQe 463
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 688 ----LSAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANsitkELQEKELVLTGLQDSLNQ 763
Cdd:TIGR00618 464 saqsLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDID----NPGPLTRRMQRGEQTYAQ 539
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 764 VNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLREnLTDMEAKFKEKDDREDQLVK 843
Cdd:TIGR00618 540 LETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQD-LTEKLSEAEDMLACEQHALL 618
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 844 AKEKLENDIAEImkmsgdnSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQ--------KSIGEVTLKAEQSQQQA 915
Cdd:TIGR00618 619 RKLQPEQDLQDV-------RLHLQQCSQELALKLTALHALQLTLTQERVREHALSirvlpkelLASRQLALQKMQSEKEQ 691
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 916 ARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDME 995
Cdd:TIGR00618 692 LTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVT 771
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 996 ELKTQADKAKSLTYLLTSAKKEIEVMSEELRGLKSEKQLYAQEANALKLEKGSLLSKliEVETKITLLQEDQQKLWSVNE 1075
Cdd:TIGR00618 772 AALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQ--EEEQFLSRLEEKSATLGEITH 849
|
490 500
....*....|....*....|.
gi 1720414365 1076 TLHLEKERVSEEKQVAEKRYQ 1096
Cdd:TIGR00618 850 QLLKYEECSKQLAQLTQEQAK 870
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1065-1377 |
1.10e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 44.12 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1065 EDQQKLWSVNETLHLEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEEllkmhmendsleaskvsmqVLI 1144
Cdd:PLN02939 114 EQQTNSKDGEQLSDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGK-------------------INI 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1145 EELRFCK-DKLMAMSEKARAEKEHLEGQVKKLTAENLVLVKDKDDVIQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAE 1223
Cdd:PLN02939 175 LEMRLSEtDARIKLAAQEKIHVEILEEQLEKLRNELLIRGATEGLCVHSLSKELDVLKEENMLLKDDIQFLKAELIEVAE 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1224 KqmslDNTCLTLKAERENLLQTNRDLQFekdTLRQGQEKLSASleATLQVKQLLStEAETLRTQLDCASKALRKAELDMR 1303
Cdd:PLN02939 255 T----EERVFKLEKERSLLDASLRELES---KFIVAQEDVSKL--SPLQYDCWWE-KVENLQDLLDRATNQVEKAALVLD 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1304 QLQTSNSSLTKL---LEEIKTCRaiTDSECIQLLHEKesLAASERTLLAEKEELLSENRI-------ITEKLSKQSEEVA 1373
Cdd:PLN02939 325 QNQDLRDKVDKLeasLKEANVSK--FSSYKVELLQQK--LKLLEERLQASDHEIHSYIQLyqesikeFQDTLSKLKEESK 400
|
....
gi 1720414365 1374 RLEM 1377
Cdd:PLN02939 401 KRSL 404
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
739-1098 |
1.14e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.74 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 739 KANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELE 818
Cdd:COG4372 11 ARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQ 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 819 KLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQ 898
Cdd:COG4372 91 AAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 899 KSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMLADTED 978
Cdd:COG4372 171 QELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEE 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 979 KLKAAQEANRDLMQDMEELKTQADKAKSLTYLLTSAKKEIEVMSEELRGLKSEKQLYAQEANALKLEKGSLLSKLIEVET 1058
Cdd:COG4372 251 LLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLEL 330
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1720414365 1059 KITLLQEDQQKLWSVNETLHLEKERVSEEKQVAEKRYQQE 1098
Cdd:COG4372 331 ALAILLAELADLLQLLLVGLLDNDVLELLSKGAEAGVADG 370
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
947-1416 |
1.15e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.99 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 947 LKAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKaksltylLTSAKKEIEVMSEELR 1026
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEE-------LEELEAELEELREELE 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1027 GLKSEKQLYA--QEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSVNETLHLEKERVSEEKQ----VAEKRYQQEHR 1100
Cdd:COG4717 120 KLEKLLQLLPlyQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEqlslATEEELQDLAE 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1101 DRESLVAEREKLLKEINAAQEELLKMHMENDSLEASKVSMQvLIEELRFCKDKLMAMSEKARAEKEHLEGQVKKLTAENL 1180
Cdd:COG4717 200 ELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAA-LEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1181 VLVkdkddVIQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENLLQTNRDLQFEKDTLRQGQ 1260
Cdd:COG4717 279 LFL-----VLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELL 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1261 EKLsASLEATLQVKQLLSTEAETLRTQLDCASKALRKAELDMRQLQtsnssltKLLEEIKTCRAITDSECIQLLHEKEsl 1340
Cdd:COG4717 354 REA-EELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQ-------ELKEELEELEEQLEELLGELEELLE-- 423
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414365 1341 AASERTLLAEKEELLSENRIITEKLSKQSEEVARLEmglnEKITYLTSEKEV--ACQKVAKLKKQQDSLLKEKSALEL 1416
Cdd:COG4717 424 ALDEEELEEELEELEEELEELEEELEELREELAELE----AELEQLEEDGELaeLLQELEELKAELRELAEEWAALKL 497
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1601-1863 |
1.28e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1601 TQEKTNSEQKVEEIIKEKELLSAETAQLAANIETLKSDFAALSKSKLELQELHScltkilddlrlnhevALTERAEVLQD 1680
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIR---------------ALEQELAALEA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1681 NKNLLAEKREMMLRNEEALKEKekleesyfiLQKEISQLAQTNSHISANLLESQSENRTLrkdkskltlkIRELETLHSF 1760
Cdd:COG4942 84 ELAELEKEIAELRAELEAQKEE---------LAELLRALYRLGRQPPLALLLSPEDFLDA----------VRRLQYLKYL 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1761 TAAQtaedaMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLK 1840
Cdd:COG4942 145 APAR-----REQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQ 219
|
250 260
....*....|....*....|...
gi 1720414365 1841 QAAAQKSQQLSALQEENVKLAEE 1863
Cdd:COG4942 220 QEAEELEALIARLEAEAAAAAER 242
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
717-1082 |
1.33e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 43.91 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 717 QQLEGAEKQIKNLETErNAESSKANSITKELQEKELVLT-GLQDSLNQVNQVKETLEKELQTLKEKfaSTSEEAVSAQTR 795
Cdd:COG5022 875 QRVELAERQLQELKID-VKSISSLKLVNLELESEIIELKkSLSSDLIENLEFKTELIARLKKLLNN--IDLEEGPSIEYV 951
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 796 MQDTVNKLHQKEeqfnvlsSELEKLRENLTDMeakFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSqLTKMNDELRL 875
Cdd:COG5022 952 KLPELNKLHEVE-------SKLKETSEEYEDL---LKKSTILVREGNKANSELKNFKKELAELSKQYGA-LQESTKQLKE 1020
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 876 KERSVEELQLKLTKANENASFL------QKSIGEVTLKAEQSQQQAarKHEEEKKELEEKLLELEKKMETSYNQCQDLKA 949
Cdd:COG5022 1021 LPVEVAELQSASKIISSESTELsilkplQKLKGLLLLENNQLQARY--KALKLRRENSLLDDKQLYQLESTENLLKTINV 1098
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 950 KYEKASSETKTKHEEILQNLQKMLADTeDKLKAAQEANRDLMQDMEELKTQADKAKSLTYLLTSAKKEIEVMSEELRGLK 1029
Cdd:COG5022 1099 KDLEVTNRNLVKPANVLQFIVAQMIKL-NLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPFAAL 1177
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1720414365 1030 SEKQLYaqEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSVN-ETLHLEKE 1082
Cdd:COG5022 1178 SEKRLY--QSALYDEKSKLSSSEVNDLKNELIALFSKIFSGWPRGdKLKKLISE 1229
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
666-1242 |
1.47e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 43.74 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 666 ELEVLQAKYTEQSEVIGNFTSQLSavkekllDLDALRKANSEGKLELETLRQQLEGAE-------KQIKNLETERNAESS 738
Cdd:PRK01156 160 EINSLERNYDKLKDVIDMLRAEIS-------NIDYLEEKLKSSNLELENIKKQIADDEkshsitlKEIERLSIEYNNAMD 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 739 KANSITKELQEkelvLTGLQDSLNQVNQVKETLEKELQTLKEKFAS-----------TSEEAVSAQTRMQDTVNKLHQKE 807
Cdd:PRK01156 233 DYNNLKSALNE----LSSLEDMKNRYESEIKTAESDLSMELEKNNYykeleerhmkiINDPVYKNRNYINDYFKYKNDIE 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 808 EQFNVLS---SELEKLREN---LTDMEA---KFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKER 878
Cdd:PRK01156 309 NKKQILSnidAEINKYHAIikkLSVLQKdynDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIER 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 879 SVEELQLKLTKANENASFLQKSIGEVTLKAEQ-SQQQAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSE 957
Cdd:PRK01156 389 MSAFISEILKIQEIDPDAIKKELNEINVKLQDiSSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVCGTTLGEEKSN 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 958 TKTKH-EEILQNLQKMLADTEDKLKAAQEANRDLMQdMEELKTQADKAKSLTY--LLTSAKKEIEVMSEELRGLKSEKQL 1034
Cdd:PRK01156 469 HIINHyNEKKSRLEEKIREIEIEVKDIDEKIVDLKK-RKEYLESEEINKSINEynKIESARADLEDIKIKINELKDKHDK 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1035 YaqeaNALKLEKGSLlsKLIEVETKITLLQEDQQKLWSVN-ETLHLEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLL 1113
Cdd:PRK01156 548 Y----EEIKNRYKSL--KLEDLDSKRTSWLNALAVISLIDiETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSI 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1114 KEInaaQEELLKMHMENDSLEASKVSMQVLIEELRFCKDKLMAMSEKARAEKEhLEGQVKKLTaENLVLVKDKDDVIQKL 1193
Cdd:PRK01156 622 REI---ENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKE-ITSRINDIE-DNLKKSRKALDDAKAN 696
|
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 1720414365 1194 QSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENL 1242
Cdd:PRK01156 697 RARLESTIEILRTRINELSDRINDINETLESMKKIKKAIGDLKRLREAF 745
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1088-1381 |
1.49e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 43.35 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1088 KQVAEKRYQQEHRDRESLVAEREKLLKEINAAQEELLKMHMENDSLEASKVSMQVLIEELRFCKDKLMAMSEKARAEKEH 1167
Cdd:pfam07888 54 NRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARIRE 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1168 LEGQVKKLTAENLvlvkDKDDVIQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSLdntCLTLKAERENLLQTNR 1247
Cdd:pfam07888 134 LEEDIKTLTQRVL----ERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSL---SKEFQELRNSLAQRDT 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1248 DLQFEKDTLRQGQEKLSASLEATLQVKQLLsteaETLRTQLDCASKALRKAELDMRQLQTSNSSLTKLLEEIKTCRAITD 1327
Cdd:pfam07888 207 QVLQLQDTITTLTQKLTTAHRKEAENEALL----EELRSLQERLNASERKVEGLGEELSSMAAQRDRTQAELHQARLQAA 282
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1720414365 1328 SECIQLLHEKESLAASERTLLAEKEELLSENRIITEKLSKQSEEVARLEMGLNE 1381
Cdd:pfam07888 283 QLTLQLADASLALREGRARWAQERETLQQSAEADKDRIEKLSAELQRLEERLQE 336
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
689-1019 |
1.51e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.35 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 689 SAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVK 768
Cdd:COG4372 31 EQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 769 ETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREdqLVKAKEKL 848
Cdd:COG4372 111 EELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAE--AEQALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 849 ENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEE 928
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAIL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 929 KLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKSLT 1008
Cdd:COG4372 269 VEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLV 348
|
330
....*....|.
gi 1720414365 1009 YLLTSAKKEIE 1019
Cdd:COG4372 349 GLLDNDVLELL 359
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
338-1552 |
1.65e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 43.89 E-value: 1.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 338 ELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQ----------FRVEEESITKGDLETQTKlehARTKELEQSLL 407
Cdd:TIGR01612 541 EIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEkeikdlfdkyLEIDDEIIYINKLKLELK---EKIKNISDKNE 617
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 408 FEKtKADKLQRELEDTRvATVSEKSRIMELEKDLALRAQEVAELRRRLESSKP-PGDVDmslSLLQEISALQEKLEAIHT 486
Cdd:TIGR01612 618 YIK-KAIDLKKIIENNN-AYIDELAKISPYQVPEHLKNKDKIYSTIKSELSKIyEDDID---ALYNELSSIVKENAIDNT 692
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 487 DHQGEMTSLKehfgAREEAFQKEIKALHTATEKLSKENeslrskLDHANKENSDVIALWKSKLETAIASH-QQAMEELKV 565
Cdd:TIGR01612 693 EDKAKLDDLK----SKIDKEYDKIQNMETATVELHLSN------IENKKNELLDIIVEIKKHIHGEINKDlNKILEDFKN 762
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 566 ---SFSKGIGTDSAEFAEL---KTQIERLRLDYQHE-----IESLQSKQDSERSA-HAKEMETMQAKLMKIIKE----KE 629
Cdd:TIGR01612 763 kekELSNKINDYAKEKDELnkyKSKISEIKNHYNDQinidnIKDEDAKQNYDKSKeYIKTISIKEDEIFKIINEmkfmKD 842
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 630 DSLEAV----------KARLDSAEDQhlveMEDTLNKLQeAEIKVKELEVLQAKYTEQSEVIGNFTsqlSAVKEKLLDLD 699
Cdd:TIGR01612 843 DFLNKVdkfinfenncKEKIDSEHEQ----FAELTNKIK-AEISDDKLNDYEKKFNDSKSLINEIN---KSIEEEYQNIN 914
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 700 ALRKANSEGKL------ELETLR-QQLEGAEKQIKNLETERNAESSKA-------NSITKELQEKELVLTGLqdSLNQVN 765
Cdd:TIGR01612 915 TLKKVDEYIKIcentkeSIEKFHnKQNILKEILNKNIDTIKESNLIEKsykdkfdNTLIDKINELDKAFKDA--SLNDYE 992
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 766 QVKETLEKELQTLKEKFASTSEEAVSAQtrmqdtvnkLHQKEEQFNVLSSELEKLRENLTDME-----AKFKEKDDREDQ 840
Cdd:TIGR01612 993 AKNNELIKYFNDLKANLGKNKENMLYHQ---------FDEKEKATNDIEQKIEDANKNIPNIEiaihtSIYNIIDEIEKE 1063
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 841 LVKAKEKLENdiaEIMKMSGDNSSQLTKMNDELRLKERS--VEELQLKLTkanENASFLQKSIGEVtlkaeqsqQQAARK 918
Cdd:TIGR01612 1064 IGKNIELLNK---EILEEAEINITNFNEIKEKLKHYNFDdfGKEENIKYA---DEINKIKDDIKNL--------DQKIDH 1129
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 919 HEEEKKELEEKLLELEKKMETSYNQCQDL--KAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEanrdlMQDMEE 996
Cdd:TIGR01612 1130 HIKALEEIKKKSENYIDEIKAQINDLEDVadKAISNDDPEEIEKKIENIVTKIDKKKNIYDEIKKLLNE-----IAEIEK 1204
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 997 LKTQADKAK--SLTYLLTSAKKEIEVMSEELRglKSEKQLYAQEANALKLEKGSLLSKLIEVETKITLLQEDQQKLWSVN 1074
Cdd:TIGR01612 1205 DKTSLEEVKgiNLSYGKNLGKLFLEKIDEEKK--KSEHMIKAMEAYIEDLDEIKEKSPEIENEMGIEMDIKAEMETFNIS 1282
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1075 ETLHlekervseekqvaEKRYQQEHRDRESLVAEREKLLK---------EINAAQEELLK------MHMENDSLEASKVS 1139
Cdd:TIGR01612 1283 HDDD-------------KDHHIISKKHDENISDIREKSLKiiedfseesDINDIKKELQKnlldaqKHNSDINLYLNEIA 1349
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1140 MQVLIEELRFCKDKLMAMSEKARAEKEHLEGQVKKLTAENLVLVKDKDDVIQKLQSAYEELVKDQKALVQEIEDLTTEKK 1219
Cdd:TIGR01612 1350 NIYNILKLNKIKKIIDEVKEYTKEIEENNKNIKDELDKSEKLIKKIKDDINLEECKSKIESTLDDKDIDECIKKIKELKN 1429
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1220 SAAEKQMSLDNTCLTLKAEREN--LLQTNRDLQFEKDTLRQGQEKLSASLEATLQVKQLLST--EAETLRTQLDCASKAL 1295
Cdd:TIGR01612 1430 HILSEESNIDTYFKNADENNENvlLLFKNIEMADNKSQHILKIKKDNATNDHDFNINELKEHidKSKGCKDEADKNAKAI 1509
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1296 RKAELDMRQLQtsnSSLTKLLE-----EIKTCRAITDSECIQLLHEKESlAASERTLLAEKEElLSENRIITEKLSKQsE 1370
Cdd:TIGR01612 1510 EKNKELFEQYK---KDVTELLNkysalAIKNKFAKTKKDSEIIIKEIKD-AHKKFILEAEKSE-QKIKEIKKEKFRIE-D 1583
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1371 EVARLEMGLNEKITYLTSEK--EVACQKVAKLKKQQDSLLKEKSALELQNGDLLAD-RESSIKTIGDLR---RKYDQEAT 1444
Cdd:TIGR01612 1584 DAAKNDKSNKAAIDIQLSLEnfENKFLKISDIKKKINDCLKETESIEKKISSFSIDsQDTELKENGDNLnslQEFLESLK 1663
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1445 NRRIVMQEKMKLLGNIDALKKELQ---ERKKENQEltsskcdLSLLLKEAQDAKKNLEKEHTSmiqaKDNLNAELKTCCC 1521
Cdd:TIGR01612 1664 DQKKNIEDKKKELDELDSEIEKIEidvDQHKKNYE-------IGIIEKIKEIAIANKEEIESI----KELIEPTIENLIS 1732
|
1290 1300 1310
....*....|....*....|....*....|.
gi 1720414365 1522 EKNMLLRDGLNLQEECQKLNEEIREIQQTLI 1552
Cdd:TIGR01612 1733 SFNTNDLEGIDPNEKLEEYNTEIGDIYEEFI 1763
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
613-785 |
1.81e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.22 E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 613 EMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQHlvemEDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNftsqlsaVK 692
Cdd:COG1579 21 RLEHRLKELPAELAELEDELAALEARLEAAKTEL----EDLEKEIKRLELEIEEVEARIKKYEEQLGNVRN-------NK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 693 EklldLDALRKansegklELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLE 772
Cdd:COG1579 90 E----YEALQK-------EIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAEL 158
|
170
....*....|...
gi 1720414365 773 KELQTLKEKFAST 785
Cdd:COG1579 159 EELEAEREELAAK 171
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
786-1177 |
1.93e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.41 E-value: 1.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 786 SEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREdQLVKAKEKLENDIAeimKMSGDnssq 865
Cdd:PRK04863 285 LEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHL-NLVQTALRQQEKIE---RYQAD---- 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 866 LTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEvtLKAEQSQQQAArkheeekkeleekllelEKKMETSYNQCQ 945
Cdd:PRK04863 357 LEELEERLEEQNEVVEEADEQQEENEARAEAAEEEVDE--LKSQLADYQQA-----------------LDVQQTRAIQYQ 417
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 946 DLKAKYEKASSETKTKHEEiLQNLQKMLADTEDKLKAAQEANRDLMQDM---EELKTQADKAKSltyLLTSAKKEIE--- 1019
Cdd:PRK04863 418 QAVQALERAKQLCGLPDLT-ADNAEDWLEEFQAKEQEATEELLSLEQKLsvaQAAHSQFEQAYQ---LVRKIAGEVSrse 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1020 ---VMSEELRGLKSEKQLyAQEANALKLEKGSLLSKLIEVETKITLLQEDQQK----------LWSVNETLHLEKERVSE 1086
Cdd:PRK04863 494 awdVARELLRRLREQRHL-AEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRlgknlddedeLEQLQEELEARLESLSE 572
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1087 EKQVAEKRYQQEHRDRESLVAEREKLLK---EINAAQEEL--LKMHMENDSLEASKVS--MQVLIEELRfckdKLMAMSE 1159
Cdd:PRK04863 573 SVSEARERRMALRQQLEQLQARIQRLAArapAWLAAQDALarLREQSGEEFEDSQDVTeyMQQLLERER----ELTVERD 648
|
410
....*....|....*...
gi 1720414365 1160 KARAEKEHLEGQVKKLTA 1177
Cdd:PRK04863 649 ELAARKQALDEEIERLSQ 666
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1756-1990 |
1.99e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1756 TLHSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKEnnlktveELNKSKELLSVENQKMEEFKKE 1835
Cdd:COG4942 12 ALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALER-------RIAALARRIRALEQELAALEAE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1836 IETLKQAAAQKSQQLSALQEENVKLAEELGRTRDE------VTSHQKLEEERSV-----LNNQLLEMKKSLPSNTLRESE 1904
Cdd:COG4942 85 LAELEKEIAELRAELEAQKEELAELLRALYRLGRQpplallLSPEDFLDAVRRLqylkyLAPARREQAEELRADLAELAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1905 FRKDADEEKASLQKSIsltsALLTEKDAELEKLRNEV-TVLRGENATAKSLHSVVQTLESDKVKLELKVKNLELQLKENK 1983
Cdd:COG4942 165 LRAELEAERAELEALL----AELEEERAALEALKAERqKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
....*..
gi 1720414365 1984 RQLSSSS 1990
Cdd:COG4942 241 ERTPAAG 247
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
1773-1955 |
2.04e-03 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 42.44 E-value: 2.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1773 MEQMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNkskellsvenQKMEEFKKEIETLKQAAAQKSQQLSA 1852
Cdd:pfam09787 49 LEELRQERDLLREEIQKLRGQIQQLRTELQELEAQQQEEAESSR----------EQLQELEEQLATERSARREAEAELER 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1853 LQEENVKLAEELGRTRDE-VTSHQKLEEERSVLNNQLleMKKSLPSNTLRESEFRKDADEEkaSLQKSISLTSALLTEKD 1931
Cdd:pfam09787 119 LQEELRYLEEELRRSKATlQSRIKDREAEIEKLRNQL--TSKSQSSSSQSELENRLHQLTE--TLIQKQTMLEALSTEKN 194
|
170 180
....*....|....*....|....*..
gi 1720414365 1932 A---ELEKLRNEVTVLRGENATAKSLH 1955
Cdd:pfam09787 195 SlvlQLERMEQQIKELQGEGSNGTSIN 221
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
344-522 |
2.21e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.08 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 344 DQLRTMVEAADREKVELLNQLEEEKRKVEDLQ-----FRVEEESItkgDLETQTKLEHARTKELEQSLL-------FEKT 411
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEaaleeFRQKNGLV---DLSEEAKLLLQQLSELESQLAearaelaEAEA 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 412 KADKLQRELEDTR--VATVSEKSRIMELEKDLALRAQEVAELRRRLESSKPpgDVdmsLSLLQEISALQEKLEAIHTDHQ 489
Cdd:COG3206 241 RLAALRAQLGSGPdaLPELLQSPVIQQLRAQLAELEAELAELSARYTPNHP--DV---IALRAQIAALRAQLQQEAQRIL 315
|
170 180 190
....*....|....*....|....*....|...
gi 1720414365 490 GEMTSLKEHFGAREEAFQKEIKALHTATEKLSK 522
Cdd:COG3206 316 ASLEAELEALQAREASLQAQLAQLEARLAELPE 348
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
607-852 |
2.24e-03 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 43.09 E-value: 2.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 607 RSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNFTS 686
Cdd:pfam05667 231 LASRLTPEEYRKRKRTKLLKRIAEQLRSAALAGTEATSGASRSAQDLAELLSSFSGSSTTDTGLTKGSRFTHTEKLQFTN 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 687 QLSAVKEKLL----DLDALRKANSEgklELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLN 762
Cdd:pfam05667 311 EAPAATSSPPtkveTEEELQQQREE---ELEELQEQLEDLESSIQELEKEIKKLESSIKQVEEELEELKEQNEELEKQYK 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 763 ------------QVNQVKetLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQ----KEEQFNVLSSELEKLRENLTD 826
Cdd:pfam05667 388 vkkktldllpdaEENIAK--LQALVDASAQRLVELAGQWEKHRVPLIEEYRALKEaksnKEDESQRKLEEIKELREKIKE 465
|
250 260
....*....|....*....|....*.
gi 1720414365 827 MEAKFKEKDDREDQLVKAKEKLENDI 852
Cdd:pfam05667 466 VAEEAKQKEELYKQLVAEYERLPKDV 491
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1093-1549 |
2.26e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.22 E-value: 2.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1093 KRYQQEHRDRESLVAEREKLLKEINAAQEELLKMHMENDSLEASKVSMQVLIEELRFCKDKLMAMSE--KARAEKEHLEG 1170
Cdd:COG4717 67 ELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQEleALEAELAELPE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1171 QVKKLtaenlvlvKDKDDVIQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQMSldntclTLKAERENLLQTNRDLQ 1250
Cdd:COG4717 147 RLEEL--------EERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQ------DLAEELEELQQRLAELE 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1251 FEKDTLRQGQEKLSASLEAtLQVKQLLSTEAETLRTQldcasKALRKAELDMRQLQTSNSSLTKLLEEIKTCRAITDSEC 1330
Cdd:COG4717 213 EELEEAQEELEELEEELEQ-LENELEAAALEERLKEA-----RLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1331 IQLLHEKESLAASERTLLAEKEELLSENRIITEKLSKQSEEVARLEMGLNEKITYLTSEKEVACQKVAKLKKQQDSLLKE 1410
Cdd:COG4717 287 ALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLE 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1411 KSALELQNgdLLAdrESSIKTIGDLRRKYDQEatnrrivmQEKMKLLGNIDALKKELQERKKENQEL--TSSKCDLSLLL 1488
Cdd:COG4717 367 ELEQEIAA--LLA--EAGVEDEEELRAALEQA--------EEYQELKEELEELEEQLEELLGELEELleALDEEELEEEL 434
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720414365 1489 KEAQDAKKNLEKEHTSMIQAKDNLNAELKTccceknmLLRDGL--NLQEECQKLNEEIREIQQ 1549
Cdd:COG4717 435 EELEEELEELEEELEELREELAELEAELEQ-------LEEDGElaELLQELEELKAELRELAE 490
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1395-1644 |
2.62e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 2.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1395 QKVAKLKKQQDSLLKEKSALELQNGDLLADRESSIKTIGDLRRKYDQEATNRRIVMQEKMKLLGNIDALKKELQERKKEn 1474
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEE- 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1475 qeltsskcdLSLLLKEAQdakKNLEKEHTSMIQAKDNLNAelktccceknmLLRDGLNLQEECQKLNEEIREIQQTLile 1554
Cdd:COG4942 106 ---------LAELLRALY---RLGRQPPLALLLSPEDFLD-----------AVRRLQYLKYLAPARREQAEELRADL--- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1555 kearakesetslyenNKLHGRVVLLEEEIQRLRVCSEQLQTENFTLTQEKTNSEQKVEEIIKEKELLSAETAQLAANIET 1634
Cdd:COG4942 160 ---------------AELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEE 224
|
250
....*....|
gi 1720414365 1635 LKSDFAALSK 1644
Cdd:COG4942 225 LEALIARLEA 234
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
709-878 |
2.87e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 42.76 E-value: 2.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 709 KLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKelvltgLQDSLNQvnqvketLEKELQTLKEKFastsEE 788
Cdd:COG0542 403 RMEIDSKPEELDELERRLEQLEIEKEALKKEQDEASFERLAE------LRDELAE-------LEEELEALKARW----EA 465
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 789 AVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDredqlvkakeklENDIAEIM---------KMS 859
Cdd:COG0542 466 EKELIEEIQELKEELEQRYGKIPELEKELAELEEELAELAPLLREEVT------------EEDIAEVVsrwtgipvgKLL 533
|
170
....*....|....*....
gi 1720414365 860 GDNSSQLTKMNDElrLKER 878
Cdd:COG0542 534 EGEREKLLNLEEE--LHER 550
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
359-1505 |
2.95e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.85 E-value: 2.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 359 ELLNQLEEEKRKVEDLQFRVEEESitkgdleTQTKLEHARTKElEQSLLFEKTKAD-KLQRELEDTRVATVSEKSRIMEL 437
Cdd:pfam01576 5 EEMQAKEEELQKVKERQQKAESEL-------KELEKKHQQLCE-EKNALQEQLQAEtELCAEAEEMRARLAARKQELEEI 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 438 EKDLALRAQEVAELRRRLESSKPpgdvdmslSLLQEISALQEKLEAIHTDHQgEMTSLKEHFGAREEAFQKEIKALHTAT 517
Cdd:pfam01576 77 LHELESRLEEEEERSQQLQNEKK--------KMQQHIQDLEEQLDEEEAARQ-KLQLEKVTTEAKIKKLEEDILLLEDQN 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 518 EKLSKENESLRSKL----DHANKENSDVIALWKSKLEtaiasHQQAMEELKVSFSKGIGTdSAEFAELKTQIERLRLDYQ 593
Cdd:pfam01576 148 SKLSKERKLLEERIseftSNLAEEEEKAKSLSKLKNK-----HEAMISDLEERLKKEEKG-RQELEKAKRKLEGESTDLQ 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 594 HEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKArldsaedqhLVEMEDTLNKLQEaeikvkELEVLQAK 673
Cdd:pfam01576 222 EQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKK---------IRELEAQISELQE------DLESERAA 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 674 YTEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLELETLRQQLEGA-EKQIKNLETERNAESSKANSITKELQEKel 752
Cdd:pfam01576 287 RNKAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQEVTELKKAlEEETRSHEAQLQEMRQKHTQALEELTEQ-- 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 753 vltglqdsLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQfnvlsseLEKLRENLTDMEakfK 832
Cdd:pfam01576 365 --------LEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQ-------LQELQARLSESE---R 426
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 833 EKDDREDQLVKAKEKLENdIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGE--VTLKAEQ 910
Cdd:pfam01576 427 QRAELAEKLSKLQSELES-VSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDerNSLQEQL 505
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 911 SQQQAARKheeekkeleekllELEKKMETSYNQCQDLKAKYEKASS------ETKTKHEEILQNLQKMLADTEDKLKAAQ 984
Cdd:pfam01576 506 EEEEEAKR-------------NVERQLSTLQAQLSDMKKKLEEDAGtlealeEGKKRLQRELEALTQQLEEKAAAYDKLE 572
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 985 EANRDLMQDMEELKTQADKAKSLTYLLTSAKKEIEVMSEELRGL---------KSEKQLYAQEANALKLEKG--SLLSKL 1053
Cdd:pfam01576 573 KTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEEKAIsaryaeerdRAEAEAREKETRALSLARAleEALEAK 652
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1054 IEVETKITLLQEDQQKLWS----VNETLH-LEKERVSEEKQVAEKRYQQEHRDRESLVAEREKLLKEIN----AAQEElL 1124
Cdd:pfam01576 653 EELERTNKQLRAEMEDLVSskddVGKNVHeLERSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNmqalKAQFE-R 731
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1125 KMHMENDSLEASKVSMQVLIEELRFCKDKLMAMSEKARAEKEHLEGQVKKLTAENLVLVKDKDDVIQ---KLQSAYEELV 1201
Cdd:pfam01576 732 DLQARDEQGEEKRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKqlkKLQAQMKDLQ 811
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1202 KDQKALVQEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENLLQTNRDLQFEKDTLrqgQEKLSASLEAtlqvKQLLSTEA 1281
Cdd:pfam01576 812 RELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDEL---ADEIASGASG----KSALQDEK 884
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1282 ETLRTQLDCASKALRKAELDMRQLQTSNSSLTKLLEEIKTCRAITDSECIQLLHEKESLAASERTLLAEKEELLSENRii 1361
Cdd:pfam01576 885 RRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKLQEMEGTVK-- 962
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1362 teklSKQSEEVARLEmglnekityltsekevacQKVAKLKKQQDSLLKEKSAlelqNGDLLADRESSIKtigDLRRKYDQ 1441
Cdd:pfam01576 963 ----SKFKSSIAALE------------------AKIAQLEEQLEQESRERQA----ANKLVRRTEKKLK---EVLLQVED 1013
|
1130 1140 1150 1160 1170 1180
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720414365 1442 EATNRRIVMQEKMKLLGNIDALKKELQERKKENQELTSSKCDLSLLLKEAQDAKKNLEKEHTSM 1505
Cdd:pfam01576 1014 ERRHADQYKDQAEKGNSRMKQLKRQLEEAEEEASRANAARRKLQRELDDATESNESMNREVSTL 1077
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1457-1885 |
3.12e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 3.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1457 LGNIDALKKELQERKKENQELTSSKCDLSLL---LKEAQDAKKNLEKEHTSMIQAKDN---------LNAELKTCCCEKN 1524
Cdd:COG4717 70 LKELKELEEELKEAEEKEEEYAELQEELEELeeeLEELEAELEELREELEKLEKLLQLlplyqeleaLEAELAELPERLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1525 ML---LRDGLNLQEECQKLNEEIREIQQTLILEKE----ARAKESETSLYENNKLHGRVVLLEEEIQRLRVCSEQLQTEn 1597
Cdd:COG4717 150 ELeerLEELRELEEELEELEAELAELQEELEELLEqlslATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEE- 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1598 FTLTQEKTNSEQKVEEIIKEKELLSAETAQLAanIETLKSDFAALSKSKLELQELHSCLTKILDDLRLNHEVALTERAEV 1677
Cdd:COG4717 229 LEQLENELEAAALEERLKEARLLLLIAAALLA--LLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEE 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1678 LQdnknllAEKREMMLRNEEALKEKEKLEESYFILQKEISQLAQTNSHIsanllesQSENRTLRKDKSKLTLKIRELETL 1757
Cdd:COG4717 307 LQ------ALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEEL-------QELLREAEELEEELQLEELEQEIA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1758 HSFTAAQTAEDamqimeqmtkektETLASLEDTKQTNARLQNELDTLKENnlktVEELNKSKELLSVENQKmEEFKKEIE 1837
Cdd:COG4717 374 ALLAEAGVEDE-------------EELRAALEQAEEYQELKEELEELEEQ----LEELLGELEELLEALDE-EELEEELE 435
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1720414365 1838 TLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVTSHQKLEEERSVLN 1885
Cdd:COG4717 436 ELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQELEELKA 483
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1579-1766 |
3.22e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1579 LEEEIQRLRVCSEQLQTENFTLTQEKTNSEQKVEEIIKEKELLSAETAQLAANIETLKSDFAALSKSKLELQELHSCLTK 1658
Cdd:COG4942 32 LQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLR 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1659 ILDDLRLNHEVAL------------------------TERAEVLQDNKNLLAEKREMMLRNEEALKE-KEKLEESYFILQ 1713
Cdd:COG4942 112 ALYRLGRQPPLALllspedfldavrrlqylkylaparREQAEELRADLAELAALRAELEAERAELEAlLAELEEERAALE 191
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1720414365 1714 KEISQLAQTNSHISANLLESQSENRTLRKDKSKLTLKIRELETLHSFTAAQTA 1766
Cdd:COG4942 192 ALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1147-1676 |
3.42e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 3.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1147 LRFCKDKLMAMSEKARAEKEHLEGQVKKLTAENLVLVKDKDDVIQKLQSAYEELVKDQKALVQEIEDLTTEKKSAAEKQM 1226
Cdd:COG4717 40 LAFIRAMLLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELE 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1227 SLdntcltlkaerENLLQTNRDLQfekdtlrqgqeklsasleatlqvkqllstEAETLRTQLDCASKALRKAELDMRQLQ 1306
Cdd:COG4717 120 KL-----------EKLLQLLPLYQ-----------------------------ELEALEAELAELPERLEELEERLEELR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1307 TSNSSLTKLLEEIKTCRAITDSECIQLLHEKEslaASERTLLAEKEELLSENRIITEKLSKQSEEVARLEmglnEKITYL 1386
Cdd:COG4717 160 ELEEELEELEAELAELQEELEELLEQLSLATE---EELQDLAEELEELQQRLAELEEELEEAQEELEELE----EELEQL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1387 TSEKEVAcQKVAKLKKQQDSLLKEKSALELQ-NGDLLADRESSIKTIGDL-------------RRKYDQEATNRRIVMQE 1452
Cdd:COG4717 233 ENELEAA-ALEERLKEARLLLLIAAALLALLgLGGSLLSLILTIAGVLFLvlgllallflllaREKASLGKEAEELQALP 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1453 KMKLLGNIDaLKKELQERKKENQELTSSKCDLSLLLKEAQDAKKNLEKEHTSM--IQAKDNLNAELKTCCCEKNMLLRDG 1530
Cdd:COG4717 312 ALEELEEEE-LEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELqlEELEQEIAALLAEAGVEDEEELRAA 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1531 LNLQEECQKLNEEIREIQQTLILEKEARAKESETSLYENnklhgrvvlLEEEIQRLRVCSEQLQTENFTLTQEKTNSEQK 1610
Cdd:COG4717 391 LEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEE---------LEEELEELEEELEELEEELEELREELAELEAE 461
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720414365 1611 VEEIIKEKELlsaetAQLAANIETLKSDFAALSKSKLELQELHSCLTKILDDLRLNHEVALTERAE 1676
Cdd:COG4717 462 LEQLEEDGEL-----AELLQELEELKAELRELAEEWAALKLALELLEEAREEYREERLPPVLERAS 522
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
711-918 |
3.46e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 3.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 711 ELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLN----QVNQVKETLEKELQTLKEKFASTS 786
Cdd:COG3883 24 ELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAeaeaEIEERREELGERARALYRSGGSVS 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 787 E-EAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQ 865
Cdd:COG3883 104 YlDVLLGSESFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEAL 183
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1720414365 866 LTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARK 918
Cdd:COG3883 184 LAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAA 236
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
501-902 |
3.91e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.64 E-value: 3.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 501 ARE---EAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIALW-KSKLETAIASHQQAMEELkvsfskgigtdSA 576
Cdd:PRK04863 783 AREkriEQLRAEREELAERYATLSFDVQKLQRLHQAFSRFIGSHLAVAfEADPEAELRQLNRRRVEL-----------ER 851
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 577 EFAELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAvkARLDSAEDQHLVEMEDTLNK 656
Cdd:PRK04863 852 ALADHESQEQQQRSQLEQAKEGLSALNRLLPRLNLLADETLADRVEEIREQLDEAEEA--KRFVQQHGNALAQLEPIVSV 929
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 657 LQEAEikvKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLE-----LETLRQQLEGAEKQIKNLET 731
Cdd:PRK04863 930 LQSDP---EQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQRRAHFSYEDAAEMLAknsdlNEKLRQRLEQAEQERTRARE 1006
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 732 E-RNAESskansitkELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQtrmQDTVNK-LHQKEEQ 809
Cdd:PRK04863 1007 QlRQAQA--------QLAQYNQVLASLKSSYDAKRQMLQELKQELQDLGVPADSGAEERARAR---RDELHArLSANRSR 1075
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 810 FNVLSSELEKLRENLTDMEAKFK--EKD--DREDQLVKAKekleNDIAEIMKMSGDNSsqltkmnDELRLKERSVEELql 885
Cdd:PRK04863 1076 RNQLEKQLTFCEAEMDNLTKKLRklERDyhEMREQVVNAK----AGWCAVLRLVKDNG-------VERRLHRRELAYL-- 1142
|
410
....*....|....*..
gi 1720414365 886 kltKANENASFLQKSIG 902
Cdd:PRK04863 1143 ---SADELRSMSDKALG 1156
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
592-1975 |
4.01e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 42.73 E-value: 4.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 592 YQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQHLVEMEDTLNKLQEAEIKvkelevlq 671
Cdd:TIGR01612 472 FEEEWGSYDIKKDIDENSKQDNTVKLILMRMKDFKDIIDFMELYKPDEVPSKNIIGFDIDQNIKAKLYKEIE-------- 543
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 672 akyteqsevignftsqlSAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNL---ETERNAESSKANSITKELQ 748
Cdd:TIGR01612 544 -----------------AGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDLfdkYLEIDDEIIYINKLKLELK 606
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 749 EKELVLTGLQDSLNQVNQVKETLEKELQTLKEkFASTSEEAVSAQTRMQDTVnklhqkeeqFNVLSSELEKLRENltDME 828
Cdd:TIGR01612 607 EKIKNISDKNEYIKKAIDLKKIIENNNAYIDE-LAKISPYQVPEHLKNKDKI---------YSTIKSELSKIYED--DID 674
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 829 AKFKE-----KDDREDQlVKAKEKLEndiaeimkmsgDNSSQLTKMNDELRLKERSVEELQLKLTKANENasflqkSIGE 903
Cdd:TIGR01612 675 ALYNElssivKENAIDN-TEDKAKLD-----------DLKSKIDKEYDKIQNMETATVELHLSNIENKKN------ELLD 736
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 904 VTLKAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKTKHeeilqNLQKMLADTEDklkaa 983
Cdd:TIGR01612 737 IIVEIKKHIHGEINKDLNKILEDFKNKEKELSNKINDYAKEKDELNKYKSKISEIKNHY-----NDQINIDNIKD----- 806
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 984 qeanrdlmqdmEELKTQADKAKSLTYLLTSAKKEIEVMSEELRGLK----SEKQLYAQEANALKLEKGSLLSKLIEVETK 1059
Cdd:TIGR01612 807 -----------EDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKddflNKVDKFINFENNCKEKIDSEHEQFAELTNK 875
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1060 ITLLQEDQQkLWSVNETLHLEKERVSEEKQVAEKRYQQEHRdreslVAEREKLLKEINAAQEELLKMHMENDSLEA---- 1135
Cdd:TIGR01612 876 IKAEISDDK-LNDYEKKFNDSKSLINEINKSIEEEYQNINT-----LKKVDEYIKICENTKESIEKFHNKQNILKEilnk 949
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1136 --SKVSMQVLIEELRFCKDKLMAMSEKARAEKEHLEGQVKKLTAENLVLVKDKDDVIQKL-----QSAYEELVKDQKALV 1208
Cdd:TIGR01612 950 niDTIKESNLIEKSYKDKFDNTLIDKINELDKAFKDASLNDYEAKNNELIKYFNDLKANLgknkeNMLYHQFDEKEKATN 1029
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1209 QEIEDLTTEKKSAAEKQMSLDNTCLTLKAERENLLQTNRDLqFEKDTLRQGQEKLSASLEATLQVKqlLSTEAETLRTQL 1288
Cdd:TIGR01612 1030 DIEQKIEDANKNIPNIEIAIHTSIYNIIDEIEKEIGKNIEL-LNKEILEEAEINITNFNEIKEKLK--HYNFDDFGKEEN 1106
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1289 DCASKALRKAELDMRQLQTSNSSLTKLLEEIKTCRAITDSECIQLLHEKESLAasERTLLAEK-EELLSENRIITEKLSK 1367
Cdd:TIGR01612 1107 IKYADEINKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLEDVA--DKAISNDDpEEIEKKIENIVTKIDK 1184
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1368 QSEevarlemgLNEKITYLTSEkevacqkVAKLKKQQDSLLKEKSaLELQNGdlladressiKTIGDL-RRKYDQEATNR 1446
Cdd:TIGR01612 1185 KKN--------IYDEIKKLLNE-------IAEIEKDKTSLEEVKG-INLSYG----------KNLGKLfLEKIDEEKKKS 1238
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1447 RIVMQEKMKLLGNIDALKKELQERKKENQELTSSKCDLSLLlkeaqDAKKNLEKEHTSMIQAKDNLNAELKtcccEKNML 1526
Cdd:TIGR01612 1239 EHMIKAMEAYIEDLDEIKEKSPEIENEMGIEMDIKAEMETF-----NISHDDDKDHHIISKKHDENISDIR----EKSLK 1309
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1527 LRDGLNlqeECQKLNEEIREIQQTLIlekEARAKESETSLYENNKLHGRVVL----LEEEIQRLRVCSEQLQTENFTLTQ 1602
Cdd:TIGR01612 1310 IIEDFS---EESDINDIKKELQKNLL---DAQKHNSDINLYLNEIANIYNILklnkIKKIIDEVKEYTKEIEENNKNIKD 1383
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1603 EKTNSEQKVEEIIKEkellsaetaqlaANIETLKSDFaalsKSKLELQELHSCLTKILDdlrlnhevaltERAEVLQDNK 1682
Cdd:TIGR01612 1384 ELDKSEKLIKKIKDD------------INLEECKSKI----ESTLDDKDIDECIKKIKE-----------LKNHILSEES 1436
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1683 NllaekremmlrNEEALKEKEKLEESYFILQKEISQLAQTNSHIsanlLESQSENRTLRKDKSKLTLKIRELETLHSFTA 1762
Cdd:TIGR01612 1437 N-----------IDTYFKNADENNENVLLLFKNIEMADNKSQHI----LKIKKDNATNDHDFNINELKEHIDKSKGCKDE 1501
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1763 A----QTAEDAMQIMEQMTKEKTETLasledTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVE----NQKMEEFKK 1834
Cdd:TIGR01612 1502 AdknaKAIEKNKELFEQYKKDVTELL-----NKYSALAIKNKFAKTKKDSEIIIKEIKDAHKKFILEaeksEQKIKEIKK 1576
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1835 EIETLKQAAAQKSQ--------QLSALQEEN--VKLAEELGRTRDEVTSHQKLEEERSVL--NNQLLEMKKSLPS-NTLR 1901
Cdd:TIGR01612 1577 EKFRIEDDAAKNDKsnkaaidiQLSLENFENkfLKISDIKKKINDCLKETESIEKKISSFsiDSQDTELKENGDNlNSLQ 1656
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1902 esEFRKDADEEKaslqKSISLTSALLTEKDAELEKLRN---------EVTVLRGENATAKSLHsvvQTLESDKVKLELKV 1972
Cdd:TIGR01612 1657 --EFLESLKDQK----KNIEDKKKELDELDSEIEKIEIdvdqhkknyEIGIIEKIKEIAIANK---EEIESIKELIEPTI 1727
|
...
gi 1720414365 1973 KNL 1975
Cdd:TIGR01612 1728 ENL 1730
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
593-834 |
4.04e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 4.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 593 QHEIESLQSKQDSERSAhAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQhLVEMEDTLNKLQeaeikvKELEVLQA 672
Cdd:COG4942 26 EAELEQLQQEIAELEKE-LAALKKEEKALLKQLAALERRIAALARRIRALEQE-LAALEAELAELE------KEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 673 KYTEQSEVIGNFtsqlsavkeklldLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEkel 752
Cdd:COG4942 98 ELEAQKEELAEL-------------LRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAE--- 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 753 vLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFK 832
Cdd:COG4942 162 -LAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
..
gi 1720414365 833 EK 834
Cdd:COG4942 241 ER 242
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
581-766 |
4.10e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.31 E-value: 4.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 581 LKTQIERLR---LDYQHEIESLQSKQ-----DSERSAHAKEMETMQAKLMKI---IKEKEDSLEAVKARLDSAEDQHLVE 649
Cdd:COG3206 180 LEEQLPELRkelEEAEAALEEFRQKNglvdlSEEAKLLLQQLSELESQLAEAraeLAEAEARLAALRAQLGSGPDALPEL 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 650 MEDT-----LNKLQEAEIkvkELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLD-----LDALRKANSEGKLELETLRQQL 719
Cdd:COG3206 260 LQSPviqqlRAQLAELEA---ELAELSARYTPNHPDVIALRAQIAALRAQLQQeaqriLASLEAELEALQAREASLQAQL 336
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1720414365 720 EGAEKQIKNLeterNAESSKANSITKELQEKELVLTGLQDSLNQVNQ 766
Cdd:COG3206 337 AQLEARLAEL----PELEAELRRLEREVEVARELYESLLQRLEEARL 379
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
836-1045 |
4.11e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 4.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 836 DREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLK-AEQSQQQ 914
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEiAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 915 AARKHEEEKKELEEKLLELEKKMETSYNQCQDLKA----KYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDL 990
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAvrrlQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1720414365 991 MQDMEELKTQADKAKS-LTYLLTSAKKEIEVMSEELRGLKSEKQLYAQEANALKLE 1045
Cdd:COG4942 180 LAELEEERAALEALKAeRQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1152-1895 |
4.12e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.26 E-value: 4.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1152 DKLMAMSEKARAEKEHLEGQVKKLTAENLVLVKDKDDVIQKLQSAYEELVKDQKALV------QEIEDLTTEKKSAAEKQ 1225
Cdd:TIGR00618 176 DQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLRealqqtQQSHAYLTQKREAQEEQ 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1226 MSLDNTCLTLKAERENL--LQTNRDLQFEKDTLRQGQEKLSASLEATLQVKQLLSTEAETLRTQLDCASKALRKAELDMR 1303
Cdd:TIGR00618 256 LKKQQLLKQLRARIEELraQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVK 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1304 Q---LQTSNSSLTKLLEEIKTCRAITDSECIQLLHEKESLAASE--RTLLAEKEELLSENRIITEKLSKQSEEVArlemg 1378
Cdd:TIGR00618 336 QqssIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQhiHTLQQQKTTLTQKLQSLCKELDILQREQA----- 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1379 lneKITYLTSEKEVACQKVAKLKKQQDSLLKEKSALELQNGDLLADRESSIKTIGDLRRKYD----QEATNRRIVMQEKM 1454
Cdd:TIGR00618 411 ---TIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKereqQLQTKEQIHLQETR 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1455 KllgnidalKKELQERKKENQELTSSKCDLSLLLKEAQDAKKNLEKEhTSMIQAKDNLNAELKTcccEKNMLLRDGLNLQ 1534
Cdd:TIGR00618 488 K--------KAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPL-TRRMQRGEQTYAQLET---SEEDVYHQLTSER 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1535 EECQKLNEEIREIQQTLILEKEARAKESEtslyENNKLHGRVVLLEEEIQRLRVCSEQLQTENFTLtQEKTNSEQKVEEI 1614
Cdd:TIGR00618 556 KQRASLKEQMQEIQQSFSILTQCDNRSKE----DIPNLQNITVRLQDLTEKLSEAEDMLACEQHAL-LRKLQPEQDLQDV 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1615 IKEKELLSAETAQLAANIETLKSDFAAlsksklELQELHSCLTKILDDLRLNHEVALTERAevlQDNKNLLAEKREMMLR 1694
Cdd:TIGR00618 631 RLHLQQCSQELALKLTALHALQLTLTQ------ERVREHALSIRVLPKELLASRQLALQKM---QSEKEQLTYWKEMLAQ 701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1695 NEEALKEKEKLEESYFILQKEISQLaqtnshisanlleSQSENRTLRKDKSKLTLKIRELETLHSFTAAQTAEDAMQIME 1774
Cdd:TIGR00618 702 CQTLLRELETHIEEYDREFNEIENA-------------SSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNE 768
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1775 QMTKEkTETLASLEDTKQTNARLQNELDTLkennlktveeLNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQ 1854
Cdd:TIGR00618 769 EVTAA-LQTGAELSHLAAEIQFFNRLREED----------THLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRL 837
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 1720414365 1855 EENVKLAEELGRTRDEVTSHQKLEEERSVLNNQLLEMKKSL 1895
Cdd:TIGR00618 838 EEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQLSDKL 878
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1332-2061 |
4.29e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 42.34 E-value: 4.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1332 QLLHEKESLAASERTLLAEKEELLSENRIITEKLSKQSEEVARLEMGLNEKITYLTSEKEvacqKVAKLKKQQDSLLKEK 1411
Cdd:TIGR00606 210 KYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDN----EIKALKSRKKQMEKDN 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1412 SALELQNGDLLADRESSIKTIGDLRRKYDQEATNRRIVMQEKmkllgnIDALKKELQERKKENQELTSSKCDLSLLLK-- 1489
Cdd:TIGR00606 286 SELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDCQRE------LEKLNKERRLLNQEKTELLVEQGRLQLQADrh 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1490 EAQDAKKNLEKEHTSMIQAKDNLNAELKTCCCEKNMLLRDGLNLQEECQKLNEEIREIQQTLILEKEARAKESETSLYEN 1569
Cdd:TIGR00606 360 QEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLG 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1570 NKLHGRVVLLEEEIQRLRVCSEQLQTenftLTQEKTNSEQKVEEIIKEKELLSaeTAQLAANIETLKSDFAALSKSKLEL 1649
Cdd:TIGR00606 440 RTIELKKEILEKKQEELKFVIKELQQ----LEGSSDRILELDQELRKAERELS--KAEKNSLTETLKKEVKSLQNEKADL 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1650 QELHSCLTKILDDLRlNHEVALTERAEVLQDNKNLLAEKREMMLRNEEAL---------------------KEKEKLEES 1708
Cdd:TIGR00606 514 DRKLRKLDQEMEQLN-HHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELtsllgyfpnkkqledwlhsksKEINQTRDR 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1709 YFILQKEISQLAQTNSHISaNLLESQSENRTLRKDK-----------SKLTLKIRELETLHSFTAAQTAEDAM--QIMEQ 1775
Cdd:TIGR00606 593 LAKLNKELASLEQNKNHIN-NELESKEEQLSSYEDKlfdvcgsqdeeSDLERLKEEIEKSSKQRAMLAGATAVysQFITQ 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1776 MTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQE 1855
Cdd:TIGR00606 672 LTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRN 751
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1856 ENVKLAEELGRTRDEVTSHQKL-------EEERSVLNNQLLEMKKSLPSNTLRESEFRKDADEEKAS-LQKSISLTSALL 1927
Cdd:TIGR00606 752 KLQKVNRDIQRLKNDIEEQETLlgtimpeEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSdLDRTVQQVNQEK 831
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1928 TEKDAELEKLRNEVTVLRG----ENATAKSLHSVVQTLESDKVKLELKVKNLElQLKENKRQLSS--SSGNTDAQAEEDE 2001
Cdd:TIGR00606 832 QEKQHELDTVVSKIELNRKliqdQQEQIQHLKSKTNELKSEKLQIGTNLQRRQ-QFEEQLVELSTevQSLIREIKDAKEQ 910
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720414365 2002 RAQESQQMIDFLNSVIVDLQRKNQDLK---MKVEMMSEAALN--GNGEDLNSYDSDDQEKQSKKK 2061
Cdd:TIGR00606 911 DSPLETFLEKDQQEKEELISSKETSNKkaqDKVNDIKEKVKNihGYMKDIENKIQDGKDDYLKQK 975
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
334-772 |
4.32e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 42.33 E-value: 4.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 334 LHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEtqTKLEHARTKELEQsllfeKTKA 413
Cdd:PRK02224 314 ARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELE--SELEEAREAVEDR-----REEI 386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 414 DKLQRELEDTRVATVSEKSRIMELEKDLALRAQEVAELRRRLesskppGDVDMSLSLLQE-ISALQEKLEAIHTDHQGEM 492
Cdd:PRK02224 387 EELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRERE------AELEATLRTARErVEEAEALLEAGKCPECGQP 460
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 493 TSLKEHFGAREEAFQKeikalhtaTEKLSKENESLRSKLDHANKENSDVIALwkSKLETAIASHQQAMEELkvsfSKGIG 572
Cdd:PRK02224 461 VEGSPHVETIEEDRER--------VEELEAELEDLEEEVEEVEERLERAEDL--VEAEDRIERLEERREDL----EELIA 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 573 TDSAEFAELKTQIERLRldyqHEIESLQSKQDSERSAHAKEMETMQAKLMKiIKEKEDSLEAVKARLDSAEDqhlveMED 652
Cdd:PRK02224 527 ERRETIEEKRERAEELR----ERAAELEAEAEEKREAAAEAEEEAEEAREE-VAELNSKLAELKERIESLER-----IRT 596
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 653 TLNKLQEAEikvKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKAN--SEGKLELETLRQQLEGAEKQIKNLE 730
Cdd:PRK02224 597 LLAAIADAE---DEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEAriEEAREDKERAEEYLEQVEEKLDELR 673
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1720414365 731 TERNAESSKANSITKELQEkelvLTGLQDSLNQVNQVKETLE 772
Cdd:PRK02224 674 EERDDLQAEIGAVENELEE----LEELRERREALENRVEALE 711
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
355-795 |
4.36e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.20 E-value: 4.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 355 REKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARTKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRI 434
Cdd:PRK01156 346 SRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKV 425
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 435 MELEKDLALRAQEVAELRRRLESSKPPGDVDMSLSLLQEisalqEKLEAIhtdhqgemtslKEHFGAREEAFQKEIKALH 514
Cdd:PRK01156 426 SSLNQRIRALRENLDELSRNMEMLNGQSVCPVCGTTLGE-----EKSNHI-----------INHYNEKKSRLEEKIREIE 489
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 515 TATEKLSKENESLRSKLDHANKEnsdvialwksKLETAIASHQQaMEELKVSFSKgIGTDSAEFAELKTQIERLRLDYQH 594
Cdd:PRK01156 490 IEVKDIDEKIVDLKKRKEYLESE----------EINKSINEYNK-IESARADLED-IKIKINELKDKHDKYEEIKNRYKS 557
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 595 -EIESLQSKQDSERSAHAK----EMETMQAK---LMKIIKEKEDSLEAVKARL---DSAEDQHLVEMEDTLNKLqeaEIK 663
Cdd:PRK01156 558 lKLEDLDSKRTSWLNALAVisliDIETNRSRsneIKKQLNDLESRLQEIEIGFpddKSYIDKSIREIENEANNL---NNK 634
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 664 VKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLELETLRQQLEGA-------EKQIKNLETERNAE 736
Cdd:PRK01156 635 YNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAkanrarlESTIEILRTRINEL 714
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 737 SSKANSITKELQEKELVLTGLQDslnqVNQVKETLEKE-LQTLKEKFAStseEAVSAQTR 795
Cdd:PRK01156 715 SDRINDINETLESMKKIKKAIGD----LKRLREAFDKSgVPAMIRKSAS---QAMTSLTR 767
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
595-860 |
4.44e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.92 E-value: 4.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 595 EIESLQSKQDsersaHAKEMETMQAKLMKIIKEKEDsleAVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKY 674
Cdd:PHA02562 182 QIQTLDMKID-----HIQQQIKTYNKNIEEQRKKNG---ENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDP 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 675 TEQSEVIGNFTSQLSAvkeKLLDLDALRKANSEGKlELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEkelvL 754
Cdd:PHA02562 254 SAALNKLNTAAAKIKS---KIEQFQKVIKMYEKGG-VCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAIDE----L 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 755 TGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQdtvnklhQKEEQFNVLSSELEKLRENLTDmeaKFKEK 834
Cdd:PHA02562 326 EEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIE-------ELQAEFVDNAEELAKLQDELDK---IVKTK 395
|
250 260
....*....|....*....|....*..
gi 1720414365 835 DDredqlvKAKEKLENDIA-EIMKMSG 860
Cdd:PHA02562 396 SE------LVKEKYHRGIVtDLLKDSG 416
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
943-1129 |
5.26e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 5.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 943 QCQDLKAKYEKASSETKT--KHEEILQNLQKmLADTEDKLKAAQEANRDLMQDMEElktqadkaksltylLTSAKKEIEV 1020
Cdd:COG4913 625 ELAEAEERLEALEAELDAlqERREALQRLAE-YSWDEIDVASAEREIAELEAELER--------------LDASSDDLAA 689
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1021 MSEELRGLKSEKQLYAQEANALKLEKGSLLSKLIEVETKITLLQEDQQklwsvnetlHLEKERVSEEKQVAEKRYQQEHR 1100
Cdd:COG4913 690 LEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLE---------AAEDLARLELRALLEERFAAALG 760
|
170 180 190
....*....|....*....|....*....|....*
gi 1720414365 1101 D------RESLVAEREKLLKEINAAQEELLKMHME 1129
Cdd:COG4913 761 DaverelRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
504-794 |
5.34e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 41.87 E-value: 5.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 504 EAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGIGTDSAE----FA 579
Cdd:COG5185 242 ESELEDLAQTSDKLEKLVEQNTDLRLEKLGENAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKATESLEeqlaAA 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 580 ELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEdsLEAVKARLDSAEDQHLVEMEDTLNKLQE 659
Cdd:COG5185 322 EAEQELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVE--LSKSSEELDSFKDTIESTKESLDEIPQN 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 660 AEIKVKE-LEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESS 738
Cdd:COG5185 400 QRGYAQEiLATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSRLEEAYDEINRSVRSK 479
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1720414365 739 KANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQT 794
Cdd:COG5185 480 KEDLNEELTQIESRVSTLKATLEKLRAKLERQLEGVRSKLDQVAESLKDFMRARGY 535
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1244-1473 |
6.60e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 6.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1244 QTNRDLQFEKDTLRQGQEKLSASLEATLQVKQLLSTEAETLRTQLDCASKALRK-------AELDMRQLQTSNSSLTKLL 1316
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRAleqelaaLEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1317 EEIKTCRAitdseciqllhekESLAASERTLLAEKEELLSENRIITEkLSKQSEEVARLEMGLNEKITYLTSEKEVACQK 1396
Cdd:COG4942 100 EAQKEELA-------------ELLRALYRLGRQPPLALLLSPEDFLD-AVRRLQYLKYLAPARREQAEELRADLAELAAL 165
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720414365 1397 VAKLKKQQDSLLKEKSALELQNGDLLADRESSIKTIGDLRRKYDQEATNRRIVMQEKMKLLGNIDALKKELQERKKE 1473
Cdd:COG4942 166 RAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
1806-2061 |
7.19e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 41.48 E-value: 7.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1806 ENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSA-LQEENVKLAEELGRTRDEVTSHQKLEEERSVL 1884
Cdd:COG5185 232 EEALKGFQDPESELEDLAQTSDKLEKLVEQNTDLRLEKLGENAESSKrLNENANNLIKQFENTKEKIAEYTKSIDIKKAT 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1885 NNQLLEMKKSLPSNTLRESEfrKDADEEKASLQKSISLTSALLTEKDAELEKLRNEVTVLRGENATAKSLHSVVQTLESD 1964
Cdd:COG5185 312 ESLEEQLAAAEAEQELEESK--RETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVELSKSSEELDSFKDTIEST 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1965 KVKLELKVKNLELQLKENKRQLSSSSGNTDAQAEEDERAQESQqmidfLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGE 2044
Cdd:COG5185 390 KESLDEIPQNQRGYAQEILATLEDTLKAADRQIEELQRQIEQA-----TSSNEEVSKLLNELISELNKVMREADEESQSR 464
|
250
....*....|....*..
gi 1720414365 2045 DLNSYDSDDQEKQSKKK 2061
Cdd:COG5185 465 LEEAYDEINRSVRSKKE 481
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
546-763 |
7.20e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 7.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 546 KSKLETAIASHQQAMEELKvsfsKGIGTDSAEFAELKTQIERLrldyqheiESLQSKQDSERSAHAKEMETMQAKLMKII 625
Cdd:COG4942 29 LEQLQQEIAELEKELAALK----KEEKALLKQLAALERRIAAL--------ARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 626 KEKEDSLEAVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKAN 705
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414365 706 SEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQ 763
Cdd:COG4942 177 EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
389-611 |
7.71e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 7.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 389 ETQTKLE--HARTKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKPP----- 461
Cdd:COG4942 24 EAEAELEqlQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEleaqk 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 462 GDVDMSLSLLQEISALQEKLEAIHTDHQGEMTSLKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDV 541
Cdd:COG4942 104 EELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAEL 183
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 542 IALwKSKLETAIASHQQAMEELKVSFSKgigtDSAEFAELKTQIERLrldyQHEIESLQSKQDSERSAHA 611
Cdd:COG4942 184 EEE-RAALEALKAERQKLLARLEKELAE----LAAELAELQQEAEEL----EALIARLEAEAAAAAERTP 244
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1044-1804 |
8.04e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 41.36 E-value: 8.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1044 LEKGSLLSKLIEVETKITLLQEDQQKLwsvnETLHLEKERVSeekqvaekryqQEHRDRESLVAEREKLLKEINAAQEEL 1123
Cdd:pfam12128 227 IRDIQAIAGIMKIRPEFTKLQQEFNTL----ESAELRLSHLH-----------FGYKSDETLIASRQEERQETSAELNQL 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1124 LkmhmenDSLEASkvsMQVLIEELRFCKDKLMAMSEKARAEKEHLEGQVKKLTAENLVLVKDKDDVIQKLQSAYEELVKD 1203
Cdd:pfam12128 292 L------RTLDDQ---WKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQEQLPSWQSELENLEER 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1204 QKALVQEIEDLTtEKKSAAEKQMSLDNtcltlKAEREnllqtnrDLQFEKDTLRQGQEKLSASLEATLQ-VKQLLSTEAE 1282
Cdd:pfam12128 363 LKALTGKHQDVT-AKYNRRRSKIKEQN-----NRDIA-------GIKDKLAKIREARDRQLAVAEDDLQaLESELREQLE 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1283 TLRTQLDCASK--ALRKAELDMRQLQTSNSSLTKLLEEIKTCRA-ITDSECIQLLHEKESLAASERTLLAEKEELLSENR 1359
Cdd:pfam12128 430 AGKLEFNEEEYrlKSRLGELKLRLNQATATPELLLQLENFDERIeRAREEQEAANAEVERLQSELRQARKRRDQASEALR 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1360 IITEKLSKQSEEVARLEMGLNEK----ITYLTSEKEVACQKVAKL-------------------KKQQDSLLKEKSALEL 1416
Cdd:pfam12128 510 QASRRLEERQSALDELELQLFPQagtlLHFLRKEAPDWEQSIGKVispellhrtdldpevwdgsVGGELNLYGVKLDLKR 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1417 QNGDLLADRESSIKTIGDLRRKYDQEATNRRIVMQEKMKLL-GNIDALKKELQERKkenQELTSSKCDLSLLLKEAQDAK 1495
Cdd:pfam12128 590 IDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQAnGELEKASREETFAR---TALKNARLDLRRLFDEKQSEK 666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1496 KNLEKEHTSmiqAKDNLNAELKTCCCEKNMLLRDGLNLQEECQKLNEEIREIQQTLILE-------KEARAKESETSLYE 1568
Cdd:pfam12128 667 DKKNKALAE---RKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVvegaldaQLALLKAAIAARRS 743
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1569 NNKLH-------------------GRVVLLEEEIQRL------------------RVCSEQLQTENFTLTQEKTNSEQKV 1611
Cdd:pfam12128 744 GAKAElkaletwykrdlaslgvdpDVIAKLKREIRTLerkieriavrrqevlryfDWYQETWLQRRPRLATQLSNIERAI 823
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1612 EEIIKEKELLSAETAQLAANIETlksDFAALSKSKLELQELHSCLTKILDDLRLNHEVALTERAEvlQDNKNLLAEKREM 1691
Cdd:pfam12128 824 SELQQQLARLIADTKLRRAKLEM---ERKASEKQQVRLSENLRGLRCEMSKLATLKEDANSEQAQ--GSIGERLAQLEDL 898
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 1692 MLRNEEALKEKEKLEESY--FILQKEISQLAQTNSHISANlLESQSENRTLRKDKSKLTLKIRELETLHSFTAAQTAEDA 1769
Cdd:pfam12128 899 KLKRDYLSESVKKYVEHFknVIADHSGSGLAETWESLREE-DHYQNDKGIRLLDYRKLVPYLEQWFDVRVPQSIMVLREQ 977
|
810 820 830
....*....|....*....|....*....|....*.
gi 1720414365 1770 MQIMEQMTKEKTETLASLED-TKQTNARLQNELDTL 1804
Cdd:pfam12128 978 VSILGVDLTEFYDVLADFDRrIASFSRELQREVGEE 1013
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
400-918 |
9.17e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.05 E-value: 9.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 400 KELEQSLLFEKTKADKLQ--RELEDTRVATVSEKSRIMELEKDLAL--RAQEVAELRRRLESSKppGDVDmslSLLQEIS 475
Cdd:COG4913 238 ERAHEALEDAREQIELLEpiRELAERYAAARERLAELEYLRAALRLwfAQRRLELLEAELEELR--AELA---RLEAELE 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 476 ALQEKLEAIHTDHQGEMTSLKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIALWKsKLETAIAS 555
Cdd:COG4913 313 RLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFA-ALRAEAAA 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 556 HQQAMEELKVSFSKGIGTDSAEFAELKTQIERLrldyQHEIESLQSKqdseRSAHAKEMETMQAKLMKIIKEKEDSL--- 632
Cdd:COG4913 392 LLEALEEELEALEEALAEAEAALRDLRRELREL----EAEIASLERR----KSNIPARLLALRDALAEALGLDEAELpfv 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 633 -EAVKARLDSA-------------------EDQHL------VEMEDTLNKLQEAEIKVKELEVLQAKYTEQS---EVIGN 683
Cdd:COG4913 464 gELIEVRPEEErwrgaiervlggfaltllvPPEHYaaalrwVNRLHLRGRLVYERVRTGLPDPERPRLDPDSlagKLDFK 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 684 FTSQLSAVKEKLLDLDALRKANSEGKLELETLRQQLEG--------------------------AEKQIKNLETERNAes 737
Cdd:COG4913 544 PHPFRAWLEAELGRRFDYVCVDSPEELRRHPRAITRAGqvkgngtrhekddrrrirsryvlgfdNRAKLAALEAELAE-- 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 738 skansitkelqekelvltgLQDSLNQVNQVKETLEKELQTLKEKFA--STSEEAVSAQTRMQDTVNKLHQKEEQFNVL-- 813
Cdd:COG4913 622 -------------------LEEELAEAEERLEALEAELDALQERREalQRLAEYSWDEIDVASAEREIAELEAELERLda 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 814 -SSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANE 892
Cdd:COG4913 683 sSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDA 762
|
570 580
....*....|....*....|....*.
gi 1720414365 893 NASFLQKSIGEVTLKAEQSQQQAARK 918
Cdd:COG4913 763 VERELRENLEERIDALRARLNRAEEE 788
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
416-662 |
9.82e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 9.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 416 LQRELEDTRVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKPPGDVDMslsLLQEISALQEKLEAIhtdhQGEMTSL 495
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDLSEEAKL---LLQQLSELESQLAEA----RAELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 496 KehfgAREEAFQKEIKALHTATEKLSkeneslrskldhankeNSDVIAlwksKLETAIASHQQAMEELKVSFskgiGTDS 575
Cdd:COG3206 239 E----ARLAALRAQLGSGPDALPELL----------------QSPVIQ----QLRAQLAELEAELAELSARY----TPNH 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414365 576 AEFAELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMETMQAKL------MKIIKEKEDSLEAVKARLDSAEDQHlve 649
Cdd:COG3206 291 PDVIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLaqlearLAELPELEAELRRLEREVEVARELY--- 367
|
250
....*....|...
gi 1720414365 650 mEDTLNKLQEAEI 662
Cdd:COG3206 368 -ESLLQRLEEARL 379
|
|
| |
