|
Name |
Accession |
Description |
Interval |
E-value |
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
154-910 |
0e+00 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 1052.11 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 154 LQTQLKEVLRENDLLRKDVEVKESKLSSSMNSIKTFWSPELKKERALRKDEASKITIWKEQYRVVQEENQHMQMTIQALQ 233
Cdd:pfam10174 1 LQAQLRDLQRENELLRRELDIKESKLGSSMNSIKTFWSPELKKERALRKEEAARISVLKEQYRVTQEENQHLQLTIQALQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 234 DELRIQRDLNQLFQQD--SSSRTGEPCVA--ELTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESI 309
Cdd:pfam10174 81 DELRAQRDLNQLLQQDftTSPVDGEDKFStpELTEENFRRLQSEHERQAKELFLLRKTLEEMELRIETQKQTLGARDESI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 310 KKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENNMLREEMHRRFENAPDSAKTKALQTVIEMKDS 389
Cdd:pfam10174 161 KKLLEMLQSKGLPKKSGEEDWERTRRIAEAEMQLGHLEVLLDQKEKENIHLREELHRRNQLQPDPAKTKALQTVIEMKDT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 390 KISSMERGLRDLEEEIQMLKSNGALSSEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKLETLTNQFS 469
Cdd:pfam10174 241 KISSLERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESELLALQTKLETLTNQNS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 470 DSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQ 549
Cdd:pfam10174 321 DCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQ 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 550 KKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDL 629
Cdd:pfam10174 401 KKIENLQEQLRDKDKQLAGLKERVKSLQTDSSNTDTALTTLEEALSEKERIIERLKEQREREDRERLEELESLKKENKDL 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 630 REKVSLLQGDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARASPEMSDRI 709
Cdd:pfam10174 481 KEKVSALQPELTEKESSLIDLKEHASSLASSGLKKDSKLKSLEIAVEQKKEECSKLENQLKKAHNAEEAVRTNPEINDRI 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 710 QQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELE----RQVKDQNKKVANLKHKEQVEKKKSAQMLEE 785
Cdd:pfam10174 561 RLLEQEVARYKEESGKAQAEVERLLGILREVENEKNDKDKKIAELEsltlRQMKEQNKKVANIKHGQQEMKKKGAQLLEE 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 786 ARRREDSLSDSSQQLQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISE 865
Cdd:pfam10174 641 ARRREDNLADNSQQLQLEELMGALEKTRQELDATKARLSSTQQSLAEKDGHLTNLRAERRKQLEEILEMKQEALLAAISE 720
|
730 740 750 760
....*....|....*....|....*....|....*....|....*.
gi 1720416781 866 KDANIALLELSSS-KKKTQEEVAALKREKDRLVQQLKQQTQNRMKL 910
Cdd:pfam10174 721 KDANIALLELSSSkKKKTQEEVMALKREKDRLVHQLKQQTQNRMKL 766
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
203-919 |
3.18e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.97 E-value: 3.18e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 203 DEASKITIWKEQYRVVQEENQHMQMTIQALQDELR-IQRDLNQLFQQdsssrtgepcvAELTEEnFQRLHAEHERQAKEL 281
Cdd:TIGR02168 162 EEAAGISKYKERRKETERKLERTRENLDRLEDILNeLERQLKSLERQ-----------AEKAER-YKELKAELRELELAL 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 282 FLLRktleemelrIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTR-RLAEAEMHVHHLES-LLEQKEKENNM 359
Cdd:TIGR02168 230 LVLR---------LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRlEVSELEEEIEELQKeLYALANEISRL 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 360 LREEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSSEEREEEMKQMEVYRSHSKFMKNK 439
Cdd:TIGR02168 301 EQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQ 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 440 IGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLtaKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQD 519
Cdd:TIGR02168 381 LETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEI--EELLKKLEEAELKELQAELEELEEELEELQEELER 458
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 520 MAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSlQADTTNTDTALTTLEEALADKER 599
Cdd:TIGR02168 459 LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKN-QSGLSGILGVLSELISVDEGYEA 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 600 TIE-----RLKEQRDRDEREKQEEIDTYKKDLKDLR---EKVSLLQGDLSEKEASLLDIKEHASSLASSGLKKDSRLK-- 669
Cdd:TIGR02168 538 AIEaalggRLQAVVVENLNAAKKAIAFLKQNELGRVtflPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRka 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 670 ------------TLEIALEQKKEECLKM-----ESQLKKAHEATLEARASPEMSD-----RIQQLEREISRYKDESSKAQ 727
Cdd:TIGR02168 618 lsyllggvlvvdDLDNALELAKKLRPGYrivtlDGDLVRPGGVITGGSAKTNSSIlerrrEIEELEEKIEELEEKIAELE 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 728 TEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQ-----------------VEKKKSAQMLEEARRRE 790
Cdd:TIGR02168 698 KALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEqleeriaqlskelteleAEIEELEERLEEAEEEL 777
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 791 DSLSDSSQQLQ--VEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA 868
Cdd:TIGR02168 778 AEAEAEIEELEaqIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESL 857
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|.
gi 1720416781 869 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDH 919
Cdd:TIGR02168 858 AAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELES 908
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
399-918 |
2.40e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 84.22 E-value: 2.40e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 399 RDLEEEIQMLKSNGALSseEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVL 478
Cdd:COG1196 216 RELKEELKELEAELLLL--KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYEL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 479 KESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQ 558
Cdd:COG1196 294 LAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 559 LRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQG 638
Cdd:COG1196 374 LAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAE 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 639 DLSEKEASLLDIKEHASSLAsSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARASPEMSDRIQQLEREISr 718
Cdd:COG1196 454 LEEEEEALLELLAELLEEAA-LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIG- 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 719 ykDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKD----------------QNKKVANLKHKEQVEKKKSAQM 782
Cdd:COG1196 532 --VEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAgratflpldkiraraaLAAALARGAIGAAVDLVASDLR 609
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 783 LEEARRREDSLSDSSQQLQVEELLMA---MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEAL 859
Cdd:COG1196 610 EADARYYVLGDTLLGRTLVAARLEAAlrrAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLA 689
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 1720416781 860 LAAISEKDANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDD 918
Cdd:COG1196 690 EEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELL 748
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
378-902 |
1.24e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 81.91 E-value: 1.24e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 378 KALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSSEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLAL 457
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRREL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 458 QTKLETLTNQfsdskqhIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDM 537
Cdd:COG1196 315 EERLEELEEE-------LAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEE 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 538 LDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQE 617
Cdd:COG1196 388 LLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAE 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 618 EIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLASSG---LKKDSRLKTLEIALEQKKEECL----------- 683
Cdd:COG1196 468 LLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKaalLLAGLRGLAGAVAVLIGVEAAYeaaleaalaaa 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 684 ------KMESQLKKAHEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQ 757
Cdd:COG1196 548 lqnivvEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTL 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 758 VKDQ----NKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMAMEKVKQELESMKAKLSSTQQSLAEK 833
Cdd:COG1196 628 VAARleaaLRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEER 707
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720416781 834 ETHLTNLRAERRKHLEEVLEMKQEALLAAISEK--DANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQ 902
Cdd:COG1196 708 ELAEAEEERLEEELEEEALEEQLEAEREELLEEllEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
230-823 |
2.04e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 81.52 E-value: 2.04e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 230 QALQDELRiQRDLNQLFQQDsssrtgepcvaELTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESI 309
Cdd:COG1196 216 RELKEELK-ELEAELLLLKL-----------RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELEL 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 310 KKLLEMLQSKGLSAKATEEDHERTRRLAEAemhvhhLESLLEQKEKENNMLREEMHRrfenapDSAKTKALQTVIEMKDS 389
Cdd:COG1196 284 EEAQAEEYELLAELARLEQDIARLEERRRE------LEERLEELEEELAELEEELEE------LEEELEELEEELEEAEE 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 390 KISSMERGLRDLEEEIQMLKSngALSSEEREEEmkqmevyrshskfmknkigQVKQELSRKDTELLALQTKLETLTNQFS 469
Cdd:COG1196 352 ELEEAEAELAEAEEALLEAEA--ELAEAEEELE-------------------ELAEELLEALRAAAELAAQLEELEEAEE 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 470 DSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQ 549
Cdd:COG1196 411 ALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAA 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 550 KKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTD---TALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKD- 625
Cdd:COG1196 491 ARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAvavLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAk 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 626 ------LKDLREKVSLLQGDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEA 699
Cdd:COG1196 571 agratfLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVT 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 700 RASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKS 779
Cdd:COG1196 651 LEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQL 730
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 1720416781 780 AQMLEEARRR--EDSLSDSSQQLQVEELLMAMEKVKQELESMKAKL 823
Cdd:COG1196 731 EAEREELLEEllEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
195-902 |
4.14e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.49 E-value: 4.14e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 195 KKERALRKD-EASKITIWKEQYRVVQEENQHMQMTIQALQDELR-IQRDLNQLFQQDSSSRTGepcvaelteenFQRLHA 272
Cdd:TIGR02168 213 ERYKELKAElRELELALLVLRLEELREELEELQEELKEAEEELEeLTAELQELEEKLEELRLE-----------VSELEE 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 273 EHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGlsaKATEEDHERTRRLAEAEMHVHHLESLLEQ 352
Cdd:TIGR02168 282 EIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELE---SKLDELAEELAELEEKLEELKEELESLEA 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 353 KEKENNMLREEMHRRFEnapdsaktkALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNgaLSSEEREEEMKQMEVYRSH 432
Cdd:TIGR02168 359 ELEELEAELEELESRLE---------ELEEQLETLRSKVAQLELQIASLNNEIERLEAR--LERLEDRRERLQQEIEELL 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 433 SKFMKNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETmLNK 512
Cdd:TIGR02168 428 KKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEG-FSE 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 513 KTKQIQDMAEEKGTQAGEIHDL----------------KDMLDVKERKVNVLQKKIE----------------------- 553
Cdd:TIGR02168 507 GVKALLKNQSGLSGILGVLSELisvdegyeaaieaalgGRLQAVVVENLNAAKKAIAflkqnelgrvtflpldsikgtei 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 554 --NLQEQLRDKEKQMSSLKERVK--------------------SLQADTTNTDTALTTLEEALAD--------------- 596
Cdd:TIGR02168 587 qgNDREILKNIEGFLGVAKDLVKfdpklrkalsyllggvlvvdDLDNALELAKKLRPGYRIVTLDgdlvrpggvitggsa 666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 597 --------KERTIERLKEQRDR---DEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLASSGLKKD 665
Cdd:TIGR02168 667 ktnssileRRREIEELEEKIEEleeKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLE 746
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 666 SRLKTLEIALEQKKEECLKMESQLKKAHEATLEARAspemsdRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKN 745
Cdd:TIGR02168 747 ERIAQLSKELTELEAEIEELEERLEEAEEELAEAEA------EIEELEAQIEQLKEELKALREALDELRAELTLLNEEAA 820
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 746 DKDKKIAELERQVKDQNKKVANLkhkEQVEKKKSAQMLEEARRREDS-LSDSSQQLQVEELLMAMEKVKQELESMKAKLS 824
Cdd:TIGR02168 821 NLRERLESLERRIAATERRLEDL---EEQIEELSEDIESLAAEIEELeELIEELESELEALLNERASLEEALALLRSELE 897
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 825 STQQSLAEKETHLTNLRAER---RKHLEEV------LEMKQEALLAAISEkDANIALLELSSSKKKTQEEVAALKREKDR 895
Cdd:TIGR02168 898 ELSEELRELESKRSELRRELeelREKLAQLelrlegLEVRIDNLQERLSE-EYSLTLEEAEALENKIEDDEEEARRRLKR 976
|
....*..
gi 1720416781 896 LVQQLKQ 902
Cdd:TIGR02168 977 LENKIKE 983
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
299-896 |
4.36e-14 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 77.03 E-value: 4.36e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 299 KQTLNARDESIKKLLemlqskglsaKATEEDHERTR----RLAEAEMHVHHLESLLEQKEKENNMLREEMHRrfenapds 374
Cdd:PRK03918 171 IKEIKRRIERLEKFI----------KRTENIEELIKekekELEEVLREINEISSELPELREELEKLEKEVKE-------- 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 375 akTKALQTVIEMKDSKISSMERGLRDLEEEIQMLksngalssEEREEEMKqmevyrSHSKFMKNKIGQVKqELSRKDTEL 454
Cdd:PRK03918 233 --LEELKEEIEELEKELESLEGSKRKLEEKIREL--------EERIEELK------KEIEELEEKVKELK-ELKEKAEEY 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 455 LalqtKLETLTNQFSDSKQHIEVLKESLtakEQRAAILQTEVDalrlRLEEKETMLNKKTKQIQDMAEEKGtQAGEIHDL 534
Cdd:PRK03918 296 I----KLSEFYEEYLDELREIEKRLSRL---EEEINGIEERIK----ELEEKEERLEELKKKLKELEKRLE-ELEERHEL 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 535 KDMLDVKERKVNVLQKKIENLQeqLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKE-------- 606
Cdd:PRK03918 364 YEEAKAKKEELERLKKRLTGLT--PEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKakgkcpvc 441
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 607 QRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKehasslasSGLKKDSRLKTLEIALEQKKEeclkME 686
Cdd:PRK03918 442 GRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELE--------KVLKKESELIKLKELAEQLKE----LE 509
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 687 SQLKKAHEATLEARASP--EMSDRIQQLEREISRYKDEsskaqtevdrlLEILKEVENEKNDKDKKIAELERQVKDQNKK 764
Cdd:PRK03918 510 EKLKKYNLEELEKKAEEyeKLKEKLIKLKGEIKSLKKE-----------LEKLEELKKKLAELEKKLDELEEELAELLKE 578
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 765 VANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLqvEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRA-- 842
Cdd:PRK03918 579 LEELGFESVEELEERLKELEPFYNEYLELKDAEKEL--EREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKky 656
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 1720416781 843 --ERRKHLEEVLEMKQEALLAAISEKDANIALL-ELSSSKKKTQEEVAALKREKDRL 896
Cdd:PRK03918 657 seEEYEELREEYLELSRELAGLRAELEELEKRReEIKKTLEKLKEELEEREKAKKEL 713
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
388-730 |
5.18e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 73.56 E-value: 5.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 388 DSKIssmERGLRDLEEEIQMLKSNGALSSEEREEeMKQMEVYRSHS-KFMKNKIGQVKQELSRKDTELLALQTKLETLTN 466
Cdd:TIGR02169 169 DRKK---EKALEELEEVEENIERLDLIIDEKRQQ-LERLRREREKAeRYQALLKEKREYEGYELLKEKEALERQKEAIER 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 467 QFSDSKQHIEVLKEsltakeqraailqtEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQ--------AGEIHDLKDML 538
Cdd:TIGR02169 245 QLASLEEELEKLTE--------------EISELEKRLEEIEQLLEELNKKIKDLGEEEQLRvkekigelEAEIASLERSI 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 539 DVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERL--KEQRDRDE-REK 615
Cdd:TIGR02169 311 AEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVdkEFAETRDElKDY 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 616 QEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEA 695
Cdd:TIGR02169 391 REKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQE 470
|
330 340 350
....*....|....*....|....*....|....*.
gi 1720416781 696 TLEARAS-PEMSDRIQQLEREISRYKDESSKAQTEV 730
Cdd:TIGR02169 471 LYDLKEEyDRVEKELSKLQRELAEAEAQARASEERV 506
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
390-894 |
6.71e-13 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 73.13 E-value: 6.71e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 390 KISSMERGLRDLEEEIQMLKSNGALSSEER---EEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKLETLTN 466
Cdd:TIGR04523 167 QKEELENELNLLEKEKLNIQKNIDKIKNKLlklELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTT 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 467 QFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKgtQAGEIHDLKDMLDVKErkvn 546
Cdd:TIGR04523 247 EISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQK--EQDWNKELKSELKNQE---- 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 547 vlqKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDrderEKQEEIDTYKKDL 626
Cdd:TIGR04523 321 ---KKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQ----SYKQEIKNLESQI 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 627 KDLREKVSLLQGDLSEKEASLLDIKEHASSLassgLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEatlearaspEMS 706
Cdd:TIGR04523 394 NDLESKIQNQEKLNQQKDEQIKKLQQEKELL----EKEIERLKETIIKNNSEIKDLTNQDSVKELIIK---------NLD 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 707 DRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEA 786
Cdd:TIGR04523 461 NTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKI 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 787 RRREDSLSDSSQQL-------QVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEAL 859
Cdd:TIGR04523 541 SDLEDELNKDDFELkkenlekEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELE 620
|
490 500 510
....*....|....*....|....*....|....*
gi 1720416781 860 LAAISEKDANIALLELSSSKKKTQEEVAALKREKD 894
Cdd:TIGR04523 621 KAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIK 655
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
708-902 |
1.01e-12 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 70.95 E-value: 1.01e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 708 RIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEAR 787
Cdd:COG4942 28 ELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 788 RREDSLSDSSQQ------------LQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEvLEMK 855
Cdd:COG4942 108 ELLRALYRLGRQpplalllspedfLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAE-LEEE 186
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1720416781 856 QEALLAAISEKDANIAllELSSSKKKTQEEVAALKREKDRLVQQLKQ 902
Cdd:COG4942 187 RAALEALKAERQKLLA--RLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
495-868 |
1.52e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.02 E-value: 1.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 495 EVDALRLRLEEKETMLNKKTKQIQDMAEEKgTQAGEIHDLKDMLdvKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVK 574
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLERLRRER-EKAERYQALLKEK--REYEGYELLKEKEALERQKEAIERQLASLEEELE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 575 SLQADTTNTDTALTTLEEALADKERTIERLKEqrdrderekqEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEha 654
Cdd:TIGR02169 255 KLTEEISELEKRLEEIEQLLEELNKKIKDLGE----------EEQLRVKEKIGELEAEIASLERSIAEKERELEDAEE-- 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 655 sslassglkkdsRLKTLEIALEQKKEEclkmesqlkkaheatlearaspemsdrIQQLEREISRYKDESSKAQTEVDRLL 734
Cdd:TIGR02169 323 ------------RLAKLEAEIDKLLAE---------------------------IEELEREIEEERKRRDKLTEEYAELK 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 735 EILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQL-----QVEELLMAM 809
Cdd:TIGR02169 364 EELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIagieaKINELEEEK 443
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1720416781 810 EKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKhLEEVLEMKQEALLAAISEKDA 868
Cdd:TIGR02169 444 EDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDR-VEKELSKLQRELAEAEAQARA 501
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
333-746 |
2.10e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 71.64 E-value: 2.10e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 333 TRRLAEAEMHVHHLESLleqkEKENNMLREEMhRRFENAPDSAKtkalqtviemkdSKISSMERGLRDLEEEIQMLKSNG 412
Cdd:TIGR02169 670 RSEPAELQRLRERLEGL----KRELSSLQSEL-RRIENRLDELS------------QELSDASRKIGEIEKEIEQLEQEE 732
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 413 ALSSEEREEEMKQMEVyrshskfMKNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIevLKESLTAKEQRAAIL 492
Cdd:TIGR02169 733 EKLKERLEELEEDLSS-------LEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARL--SHSRIPEIQAELSKL 803
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 493 QTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKER 572
Cdd:TIGR02169 804 EEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESR 883
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 573 VKSLQadttntdtalttleealADKERTIERLKEQRDRdEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKE 652
Cdd:TIGR02169 884 LGDLK-----------------KERDELEAQLRELERK-IEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEE 945
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 653 HASSLASsglkkdsrlktleiaLEQKKEECLKMESQLKKAHEATLEAraspemsdrIQQLEREISRYKDESSKAQT---E 729
Cdd:TIGR02169 946 IPEEELS---------------LEDVQAELQRVEEEIRALEPVNMLA---------IQEYEEVLKRLDELKEKRAKleeE 1001
|
410
....*....|....*..
gi 1720416781 730 VDRLLEILKEVENEKND 746
Cdd:TIGR02169 1002 RKAILERIEEYEKKKRE 1018
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
212-769 |
2.87e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 71.30 E-value: 2.87e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 212 KEQYRVVQEENQH-MQMTIQALQDELRI-----QRDLNQLFQQDSSSRTGEPCVAELTEENFQRLHAEHERQAKELFLLR 285
Cdd:pfam15921 244 EDQLEALKSESQNkIELLLQQHQDRIEQlisehEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLE 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 286 KTLEEMELRIETQKQTLNARDESIKKLLEMLQSKgLSAKATEEDhERTRRLAEAEMHVHHLESLLEQKEKENNMLREEMH 365
Cdd:pfam15921 324 STVSQLRSELREAKRMYEDKIEELEKQLVLANSE-LTEARTERD-QFSQESGNLDDQLQKLLADLHKREKELSLEKEQNK 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 366 RRFE-NAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSSEEREEEMKQMEVYRSHSKFMKNKIGQVK 444
Cdd:pfam15921 402 RLWDrDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVV 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 445 QELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAI-----------------LQTEVDALRLRLEEKE 507
Cdd:pfam15921 482 EELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLklqelqhlknegdhlrnVQTECEALKLQMAEKD 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 508 TMLNKKTKQIQDMAE---EKGTQAGEIHDLKDMLdvkERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTD 584
Cdd:pfam15921 562 KVIEILRQQIENMTQlvgQHGRTAGAMQVEKAQL---EKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLV 638
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 585 talttleEALADKERTIERLKEQRDrderEKQEEIDTYKKDLKDLREKVSLLQGDLSEK----EASLLDIKEHASSLASS 660
Cdd:pfam15921 639 -------NAGSERLRAVKDIKQERD----QLLNEVKTSRNELNSLSEDYEVLKRNFRNKseemETTTNKLKMQLKSAQSE 707
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 661 GLKKDSRLKTLEIALEQKKEECLKMESQLKkAHEATLEAraspeMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEV 740
Cdd:pfam15921 708 LEQTRNTLKSMEGSDGHAMKVAMGMQKQIT-AKRGQIDA-----LQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTV 781
|
570 580
....*....|....*....|....*....
gi 1720416781 741 ENEKNDKDKKIAELERQVKDQNKKVANLK 769
Cdd:pfam15921 782 ATEKNKMAGELEVLRSQERRLKEKVANME 810
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
273-913 |
2.93e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 71.25 E-value: 2.93e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 273 EHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKgLSAKATEEDHERTRRLAEAEMHVHHLESLLEQ 352
Cdd:TIGR02169 234 ALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKK-IKDLGEEEQLRVKEKIGELEAEIASLERSIAE 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 353 KEKENNMLREEMhrrfenAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSSEEREEEMKQMEVYRSH 432
Cdd:TIGR02169 313 KERELEDAEERL------AKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDE 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 433 SKFMKNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNK 512
Cdd:TIGR02169 387 LKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSK 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 513 KTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIEN---LQEQLRDKEK-------QMSSLKER-VKSLQADTT 581
Cdd:TIGR02169 467 YEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGgraVEEVLKASIQgvhgtvaQLGSVGERyATAIEVAAG 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 582 NTDTALTTLEEALAdkERTIERLKEQRD-----------RDEREKQEEIDT-----YKKDLKDLREKVS----------- 634
Cdd:TIGR02169 547 NRLNNVVVEDDAVA--KEAIELLKRRKAgratflplnkmRDERRDLSILSEdgvigFAVDLVEFDPKYEpafkyvfgdtl 624
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 635 ------------------LLQGDLSEKEASLL---DIKEHASSLASSGLKKDSRLKTLEIALEQKKEECL-KMESQLKKA 692
Cdd:TIGR02169 625 vvedieaarrlmgkyrmvTLEGELFEKSGAMTggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQsELRRIENRL 704
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 693 HEATLEARASPEM----SDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANL 768
Cdd:TIGR02169 705 DELSQELSDASRKigeiEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDL 784
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 769 K----HKEQVEKKKSAQMLEEARRRedslsdssqqlqVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAER 844
Cdd:TIGR02169 785 EarlsHSRIPEIQAELSKLEEEVSR------------IEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSI 852
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720416781 845 RKHLEEvLEMKQEALLAAISEKDAniALLELSSSKKKtqeevaaLKREKDRLVQQLKQQTQNRMKLMAD 913
Cdd:TIGR02169 853 EKEIEN-LNGKKEELEEELEELEA--ALRDLESRLGD-------LKKERDELEAQLRELERKIEELEAQ 911
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
344-784 |
2.11e-11 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 68.12 E-value: 2.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 344 HHLESLLEQKEKENNMLREEMHRRFEnapdsaKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSSEEREEEM 423
Cdd:TIGR04523 200 ELLLSNLKKKIQKNKSLESQISELKK------QNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQ 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 424 KQMEVYRSHSKFMKNKIGQVKQELS------------RKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAI 491
Cdd:TIGR04523 274 KELEQNNKKIKELEKQLNQLKSEISdlnnqkeqdwnkELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTN 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 492 LQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKE 571
Cdd:TIGR04523 354 SESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKE 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 572 RVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEK---EASLL 648
Cdd:TIGR04523 434 TIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKkelEEKVK 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 649 DIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKaheATLEARASpEMSDRIQQLEREISRYKDESSKAQT 728
Cdd:TIGR04523 514 DLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKK---ENLEKEID-EKNKEIEELKQTQKSLKKKQEEKQE 589
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1720416781 729 EVDRLLEILKEVENEKNDKDKKIAELERQVKD---QNKKVANLKHKEQVEKKKSAQMLE 784
Cdd:TIGR04523 590 LIDQKEKEKKDLIKEIEEKEKKISSLEKELEKakkENEKLSSIIKNIKSKKNKLKQEVK 648
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
153-900 |
2.19e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 68.17 E-value: 2.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 153 DLQTQLKEVLRENDLLRK---DVEVKESKLSSSMNSIKTFWSPELKKERALRKDEASKItiwKEQYRVVQEENQHMQMTI 229
Cdd:TIGR02169 234 ALERQKEAIERQLASLEEeleKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRV---KEKIGELEAEIASLERSI 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 230 QALQDELR-IQRDLNQLFQQ-DSSSRTGEPCVAELTEENFQR--LHAEHERQAKELFLLRKTLEEMELRIETQKQTLNAR 305
Cdd:TIGR02169 311 AEKERELEdAEERLAKLEAEiDKLLAEIEELEREIEEERKRRdkLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDY 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 306 DESIKKLL-EMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENNMLREEMHRRFENAPD-SAKTKALQTV 383
Cdd:TIGR02169 391 REKLEKLKrEINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQlAADLSKYEQE 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 384 IEMKDSKISSMERGLRDLEEEIQMLKSNGALSSEEREEEMKQMEVYRSHskfMKNKIGQVKQELSRKDTELLALQTKLET 463
Cdd:TIGR02169 471 LYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKAS---IQGVHGTVAQLGSVGERYATAIEVAAGN 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 464 LTNQF-----SDSKQHIEVLKESltaKEQRAAILQTEvdalRLRLEEKETMLNKKTKQIQ---DMAE-EKGTQAGEIHDL 534
Cdd:TIGR02169 548 RLNNVvveddAVAKEAIELLKRR---KAGRATFLPLN----KMRDERRDLSILSEDGVIGfavDLVEfDPKYEPAFKYVF 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 535 KDML---DVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRD 611
Cdd:TIGR02169 621 GDTLvveDIEAARRLMGKYRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRI 700
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 612 ER---EKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQ 688
Cdd:TIGR02169 701 ENrldELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEA 780
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 689 LkkaheATLEARASPEmsdRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANL 768
Cdd:TIGR02169 781 L-----NDLEARLSHS---RIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSI 852
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 769 KHKEQVEKKKSAQMLEEARRRedslsdssqQLQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKEThltnlRAERRKHL 848
Cdd:TIGR02169 853 EKEIENLNGKKEELEEELEEL---------EAALRDLESRLGDLKKERDELEAQLRELERKIEELEA-----QIEKKRKR 918
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|..
gi 1720416781 849 EEVLEMKQEALLAAISEKDANIALLELSSSKKKTQEEVAALKREKDRLVQQL 900
Cdd:TIGR02169 919 LSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRAL 970
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
391-901 |
3.33e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 67.40 E-value: 3.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 391 ISSMERGLRDLEEEIQMLKsngaLSSEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKLETLtnqfSD 470
Cdd:PRK03918 157 LDDYENAYKNLGEVIKEIK----RRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKL----EK 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 471 SKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEekgtQAGEIHDLKDmldvKERKVNVLQK 550
Cdd:PRK03918 229 EVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEE----KVKELKELKE----KAEEYIKLSE 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 551 KIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDE-----REKQEEIDTYKKD 625
Cdd:PRK03918 301 FYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHElyeeaKAKKEELERLKKR 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 626 LK-----DLREKVSLLQGDLSEKEASLLDIKEHASSLAssglKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEAR 700
Cdd:PRK03918 381 LTgltpeKLEKELEELEKAKEEIEEEISKITARIGELK----KEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEE 456
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 701 ASPEMSDriqqLEREISRYKDESSKAQTEVDRLLEILKEveNEKNDKDKKIAELERQVKDQNKKVanlkHKEQVEKKksA 780
Cdd:PRK03918 457 YTAELKR----IEKELKEIEEKERKLRKELRELEKVLKK--ESELIKLKELAEQLKELEEKLKKY----NLEELEKK--A 524
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 781 QMLEEARRREDSLSdsSQQLQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEmkqeall 860
Cdd:PRK03918 525 EEYEKLKEKLIKLK--GEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLK------- 595
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 1720416781 861 aaiSEKDANIALLELSSSKKKTQEEVAALKREKDRLVQQLK 901
Cdd:PRK03918 596 ---ELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFE 633
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
160-804 |
2.16e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 65.16 E-value: 2.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 160 EVLRENDLLRKDVEVKESKLSSSMNSIKTFwSPELKKERALRKDEASKItiwkEQYRVVQEENQHMQMTIQALQDELRIQ 239
Cdd:PTZ00121 1179 EAARKAEEVRKAEELRKAEDARKAEAARKA-EEERKAEEARKAEDAKKA----EAVKKAEEAKKDAEEAKKAEEERNNEE 1253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 240 RDLNQLFQQDSSSRTGEPCVAELTEENFQRLHAEHERQAKELfllrKTLEEMELRIETQKQTLNARD-ESIKKLLEMLQS 318
Cdd:PTZ00121 1254 IRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEA----KKAEEKKKADEAKKKAEEAKKaDEAKKKAEEAKK 1329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 319 KGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENNMLREEMHRRfenAPDSAKTKALQTviemkdSKISSMERGL 398
Cdd:PTZ00121 1330 KADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKK---KADAAKKKAEEK------KKADEAKKKA 1400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 399 RDLEEEIQMLKSNGALSSEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTEllalQTKLETLTNQFSDSKQHIEVL 478
Cdd:PTZ00121 1401 EEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEE----AKKAEEAKKKAEEAKKADEAK 1476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 479 KESLTAKE-----QRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEE--KGTQAGEIHDLKDMLDVKE----RKVNV 547
Cdd:PTZ00121 1477 KKAEEAKKadeakKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEakKAEEAKKADEAKKAEEKKKadelKKAEE 1556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 548 LQK--KIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEidtykkd 625
Cdd:PTZ00121 1557 LKKaeEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAE------- 1629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 626 lkDLREKVSLLQGDLSE--KEASLLDIKEHASSLASSGLKKDSRLKtleialEQKKEECLKMESQLKKAHEATLEARASP 703
Cdd:PTZ00121 1630 --EEKKKVEQLKKKEAEekKKAEELKKAEEENKIKAAEEAKKAEED------KKKAEEAKKAEEDEKKAAEALKKEAEEA 1701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 704 EMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEkndkDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQML 783
Cdd:PTZ00121 1702 KKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEE----DKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEK 1777
|
650 660
....*....|....*....|.
gi 1720416781 784 EEARRREDSLSDSSQQLQVEE 804
Cdd:PTZ00121 1778 EAVIEEELDEEDEKRRMEVDK 1798
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
384-896 |
3.74e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 64.29 E-value: 3.74e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 384 IEMKDSK-----ISSMERGLRDLEEEIQMLKSNGALSSEEREEEMKQMEVYRSHskfmKNKIGQVKQELSRKDTELLALQ 458
Cdd:PRK02224 196 IEEKEEKdlherLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEER----REELETLEAEIEDLRETIAETE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 459 TKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEketmLNKKTKQIQDMAEEKGTQAGE-------- 530
Cdd:PRK02224 272 REREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREE----LEDRDEELRDRLEECRVAAQAhneeaesl 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 531 ---IHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLqadttntdtalttlEEALADKERTIERLKEQ 607
Cdd:PRK02224 348 redADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEEL--------------RERFGDAPVDLGNAEDF 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 608 RDrderEKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIK-----------EHASSLAssglKKDSRLKTLEIALE 676
Cdd:PRK02224 414 LE----ELREERDELREREAELEATLRTARERVEEAEALLEAGKcpecgqpvegsPHVETIE----EDRERVEELEAELE 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 677 QKKEECLKMESQLKKAHEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELER 756
Cdd:PRK02224 486 DLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEE 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 757 QVKDQNKKVANLKHKeqvekkksaqmLEEARRREDSLSDssqqlqVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETH 836
Cdd:PRK02224 566 EAEEAREEVAELNSK-----------LAELKERIESLER------IRTLLAAIADAEDEIERLREKREALAELNDERRER 628
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720416781 837 LTNLRaERRKHLEEvlEMKQEALLAAISEKD------ANIA--LLELSSSKKKTQEEVAALKREKDRL 896
Cdd:PRK02224 629 LAEKR-ERKRELEA--EFDEARIEEAREDKEraeeylEQVEekLDELREERDDLQAEIGAVENELEEL 693
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
277-629 |
5.24e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 63.92 E-value: 5.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 277 QAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLqskglsAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKE 356
Cdd:TIGR02168 675 RRREIEELEEKIEELEEKIAELEKALAELRKELEELEEEL------EQLRKELEELSRQISALRKDLARLEAEVEQLEER 748
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 357 NNMLREEMhrrfenapdsaktKALQTVIEMKDSKISSMERGLRDLEEEIqmlksngalssEEREEEMKQmevyrshskfM 436
Cdd:TIGR02168 749 IAQLSKEL-------------TELEAEIEELEERLEEAEEELAEAEAEI-----------EELEAQIEQ----------L 794
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 437 KNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQ 516
Cdd:TIGR02168 795 KEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESE 874
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 517 IQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALAD 596
Cdd:TIGR02168 875 LEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLE 954
|
330 340 350
....*....|....*....|....*....|...
gi 1720416781 597 kerTIERLKEQRDRDEREKQEEIDTYKKDLKDL 629
Cdd:TIGR02168 955 ---EAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
150-902 |
5.78e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 63.60 E-value: 5.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 150 TIMDLQTQLKEVLRENDLLrKDVEVKESKLSSSMNSIKTFWSPELKKERALRKDEASKITIWKEQYRVVQEENQHMQMTI 229
Cdd:pfam15921 111 SVIDLQTKLQEMQMERDAM-ADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEI 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 230 QALQDELRiQRDLNQLFQQDSssrtgepcvaeLTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTLNArdESI 309
Cdd:pfam15921 190 RSILVDFE-EASGKKIYEHDS-----------MSTMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKS--ESQ 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 310 KKLLEMLQSkglsakateedhertrrlaeaemHVHHLESLLEQKEKENNMLREEMHRRFENApdSAKTKALQTVIEMKDS 389
Cdd:pfam15921 256 NKIELLLQQ-----------------------HQDRIEQLISEHEVEITGLTEKASSARSQA--NSIQSQLEIIQEQARN 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 390 KISSMERGLRDLEEEIQMLKSN---GALSSEEREEEM-KQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKLETLT 465
Cdd:pfam15921 311 QNSMYMRQLSDLESTVSQLRSElreAKRMYEDKIEELeKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKRE 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 466 NQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEkgtQAGEIHDLKDMLDvkerKV 545
Cdd:pfam15921 391 KELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMER---QMAAIQGKNESLE----KV 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 546 NVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEeIDTYKKD 625
Cdd:pfam15921 464 SSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQH-LKNEGDH 542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 626 LKDLREKVSLLQGDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEEC---------LKMESQLKKAHEAT 696
Cdd:pfam15921 543 LRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEIndrrlelqeFKILKDKKDAKIRE 622
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 697 LEARASPEMSDRIQQLEREISRYKDESSKAQtEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEK 776
Cdd:pfam15921 623 LEARVSDLELEKVKLVNAGSERLRAVKDIKQ-ERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQL 701
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 777 KKSAQMLEEARRREDSLSDSSQQlqVEELLMAMEKvkqELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQ 856
Cdd:pfam15921 702 KSAQSELEQTRNTLKSMEGSDGH--AMKVAMGMQK---QITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQ 776
|
730 740 750 760
....*....|....*....|....*....|....*....|....*.
gi 1720416781 857 EALLAAISEKDANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQ 902
Cdd:pfam15921 777 ELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAE 822
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
268-916 |
6.18e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 63.60 E-value: 6.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 268 QRLHAEHERQAKELFLLRKT-------LEEMELRIETQKQTLNARDESIKKLLEMLQS---KGLSAKATEEDhertrRLA 337
Cdd:pfam15921 92 RRLNESNELHEKQKFYLRQSvidlqtkLQEMQMERDAMADIRRRESQSQEDLRNQLQNtvhELEAAKCLKED-----MLE 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 338 EAEMHVHHLESLLEQKEKENNMLREEMhRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKsnGALSSE 417
Cdd:pfam15921 167 DSNTQIEQLRKMMLSHEGVLQEIRSIL-VDFEEASGKKIYEHDSMSTMHFRSLGSAISKILRELDTEISYLK--GRIFPV 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 418 EREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESltAKEQRA------AI 491
Cdd:pfam15921 244 EDQLEALKSESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQ--ARNQNSmymrqlSD 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 492 LQTEVDALRLRLEEKETMLNKKTKQIQ------------------DMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKK-- 551
Cdd:pfam15921 322 LESTVSQLRSELREAKRMYEDKIEELEkqlvlanseltearterdQFSQESGNLDDQLQKLLADLHKREKELSLEKEQnk 401
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 552 ------------IENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTleeALADKERTIERLKEQRDRDEREKQ--- 616
Cdd:pfam15921 402 rlwdrdtgnsitIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMA---AIQGKNESLEKVSSLTAQLESTKEmlr 478
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 617 ---EEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLASS---GLKKDSRLKTLEIALEQKKEECLKMESQLK 690
Cdd:pfam15921 479 kvvEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRvdlKLQELQHLKNEGDHLRNVQTECEALKLQMA 558
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 691 KAHEATLEARASPE-MSDRIQQLEREISRYKDESSKAQTEV-DRLLEiLKEVENEKNDKDKKIAELERQVKD---QNKKV 765
Cdd:pfam15921 559 EKDKVIEILRQQIEnMTQLVGQHGRTAGAMQVEKAQLEKEInDRRLE-LQEFKILKDKKDAKIRELEARVSDlelEKVKL 637
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 766 ANLKHKE----QVEKKKSAQMLEEARRREDSLSDSSQQLQV---------EELLMAMEKVKQELESMKAKLSSTQQSLAE 832
Cdd:pfam15921 638 VNAGSERlravKDIKQERDQLLNEVKTSRNELNSLSEDYEVlkrnfrnksEEMETTTNKLKMQLKSAQSELEQTRNTLKS 717
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 833 KE---THLTNLRAERRKHLE------EVLEMKQEALLAAISekDANIALLELSSSKKKTQEEVAALKREKDRLVQQLK-- 901
Cdd:pfam15921 718 MEgsdGHAMKVAMGMQKQITakrgqiDALQSKIQFLEEAMT--NANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEvl 795
|
730
....*....|....*
gi 1720416781 902 QQTQNRMKLMADNYE 916
Cdd:pfam15921 796 RSQERRLKEKVANME 810
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
387-909 |
8.51e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 63.24 E-value: 8.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 387 KDSKISSMERGLRD--LEEEIQMLKSNGALSSEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKLETL 464
Cdd:PTZ00121 1077 KDFDFDAKEDNRADeaTEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEI 1156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 465 TNQFSDSKQHIEVLK--ESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAE-EKGTQAGEIHDLKDMLDVK 541
Cdd:PTZ00121 1157 ARKAEDARKAEEARKaeDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEaRKAEDAKKAEAVKKAEEAK 1236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 542 ERKVNVLQ-KKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEAlaDKERTIERLKEQRDRDEREKQEEID 620
Cdd:PTZ00121 1237 KDAEEAKKaEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEK--KKADEAKKAEEKKKADEAKKKAEEA 1314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 621 TYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEAR 700
Cdd:PTZ00121 1315 KKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKAD 1394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 701 ASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHK-EQVEKKKS 779
Cdd:PTZ00121 1395 EAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKaEEAKKADE 1474
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 780 AQMLEEARRREDSLSDSSQQL--QVEELLMAMEKVKQELESMKAKLSSTQQSL--AEKETHLTNLR-AERRKHLEEV--- 851
Cdd:PTZ00121 1475 AKKKAEEAKKADEAKKKAEEAkkKADEAKKAAEAKKKADEAKKAEEAKKADEAkkAEEAKKADEAKkAEEKKKADELkka 1554
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720416781 852 -----LEMKQEALLAAISEKDANIALL---ELSSSKKKTQEEVAALKREKDRL-VQQLKQQTQNRMK 909
Cdd:PTZ00121 1555 eelkkAEEKKKAEEAKKAEEDKNMALRkaeEAKKAEEARIEEVMKLYEEEKKMkAEEAKKAEEAKIK 1621
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
275-872 |
9.23e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 62.77 E-value: 9.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 275 ERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKE 354
Cdd:PRK03918 227 EKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYL 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 355 KENNMLREEMHRRfenapdSAKTKALQTVIEMKDSKISSMERgLRDLEEEIQMLKSNGALSSEEREEEMKQMEVYRSHSK 434
Cdd:PRK03918 307 DELREIEKRLSRL------EEEINGIEERIKELEEKEERLEE-LKKKLKELEKRLEELEERHELYEEAKAKKEELERLKK 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 435 FMKNK-IGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLtaKEQRAAILQTEVDALRLRLEEKETMLNKK 513
Cdd:PRK03918 380 RLTGLtPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAI--EELKKAKGKCPVCGRELTEEHRKELLEEY 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 514 TKQIQDMAEEKGTqageihdlkdmLDVKERKVNVLQKKIENlqeqLRDKEKQMSSLKErvkslqadttntdtalttleea 593
Cdd:PRK03918 458 TAELKRIEKELKE-----------IEEKERKLRKELRELEK----VLKKESELIKLKE---------------------- 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 594 ladkerTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEhasslassgLKKdsRLKTLEI 673
Cdd:PRK03918 501 ------LAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEE---------LKK--KLAELEK 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 674 ALEQKKEECLKMESQLKKAHEATLEaraspEMSDRIQQLEREISRY------KDESSKAQTEVDRLLEILKEVENEKNDK 747
Cdd:PRK03918 564 KLDELEEELAELLKELEELGFESVE-----ELEERLKELEPFYNEYlelkdaEKELEREEKELKKLEEELDKAFEELAET 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 748 DKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQM--------LEEARRREDSLSDSSQQLqvEELLMAMEKVKQELESM 819
Cdd:PRK03918 639 EKRLEELRKELEELEKKYSEEEYEELREEYLELSRelaglraeLEELEKRREEIKKTLEKL--KEELEEREKAKKELEKL 716
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 1720416781 820 KAKLSSTQQsLAEKETHLTNLRAERRkhLEEVLEMKQEALLAAISEKDANIAL 872
Cdd:PRK03918 717 EKALERVEE-LREKVKKYKALLKERA--LSKVGEIASEIFEELTEGKYSGVRV 766
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
437-645 |
9.60e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 61.70 E-value: 9.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 437 KNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQ 516
Cdd:COG4942 33 QQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRA 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 517 IQDMAEEKGTQ----AGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEE 592
Cdd:COG4942 113 LYRLGRQPPLAlllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEA 192
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1720416781 593 ALADKERTIERLKeqrdRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEA 645
Cdd:COG4942 193 LKAERQKLLARLE----KELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
268-902 |
2.70e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 61.60 E-value: 2.70e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 268 QRLHAEHERQAKELFLLRKTLEEMELRIETQK-QTLNARDESIKKL-LEMLQSKGLSAKATEEDHERTRRLAEAEMHVHH 345
Cdd:TIGR00606 464 QQLEGSSDRILELDQELRKAERELSKAEKNSLtETLKKEVKSLQNEkADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKD 543
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 346 LESLLEQKEKENNMLREEMhrrFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSSEEREEEMKQ 425
Cdd:TIGR00606 544 KMDKDEQIRKIKSRHSDEL---TSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQ 620
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 426 MEVYRSH------SKFMKNKIGQVKQELSRKDTELLALQTKletlTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDAL 499
Cdd:TIGR00606 621 LSSYEDKlfdvcgSQDEESDLERLKEEIEKSSKQRAMLAGA----TAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEF 696
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 500 RLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMldvKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQAD 579
Cdd:TIGR00606 697 ISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPG---RQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETL 773
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 580 TTNTDTALTTLEEALADKErTIERLKEQRDRDEREKQEEIDtyKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLAS 659
Cdd:TIGR00606 774 LGTIMPEEESAKVCLTDVT-IMERFQMELKDVERKIAQQAA--KLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRK 850
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 660 SGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEAtleARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKE 739
Cdd:TIGR00606 851 LIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQF---EEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEE 927
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 740 VENEKNDKDKKIaelERQVKDQNKKVANLK-HKEQVEKKKSAQMLEEARRREDSLSDSSQQLqvEELLMAMEKVKQELES 818
Cdd:TIGR00606 928 LISSKETSNKKA---QDKVNDIKEKVKNIHgYMKDIENKIQDGKDDYLKQKETELNTVNAQL--EECEKHQEKINEDMRL 1002
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 819 MKAKLSSTQQSLAEKETHLTnlraeRRKHLEEVLEMKQEalLAAISEKDANIALLELSSSKKKTQEEVAALKREKDRLVQ 898
Cdd:TIGR00606 1003 MRQDIDTQKIQERWLQDNLT-----LRKRENELKEVEEE--LKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALG 1075
|
....
gi 1720416781 899 QLKQ 902
Cdd:TIGR00606 1076 RQKG 1079
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
176-645 |
5.23e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.44 E-value: 5.23e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 176 ESKLSSSMNSIKTFwspELKKERAL-RKDEASKITIWKEQYR----VVQEENQHMQMTI-------QALQDELRIQRDLN 243
Cdd:PRK02224 212 ESELAELDEEIERY---EEQREQAReTRDEADEVLEEHEERReeleTLEAEIEDLRETIaetererEELAEEVRDLRERL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 244 QLFQQDSSSRTGEpcvAELTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEmlQSKGLSA 323
Cdd:PRK02224 289 EELEEERDDLLAE---AGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEE--RAEELRE 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 324 KATEEDHErtrrLAEAEMHVHHLESLLEQKEKENNMLREemhrRFENAPDS--AKTKALQTVIEMKD---SKISSMERGL 398
Cdd:PRK02224 364 EAAELESE----LEEAREAVEDRREEIEELEEEIEELRE----RFGDAPVDlgNAEDFLEELREERDelrEREAELEATL 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 399 RDLEEEI----------------QMLK-SNGALSSEEREEEMKQMEVYRSHskfMKNKIGQVKQELSRKdTELLALQTKL 461
Cdd:PRK02224 436 RTARERVeeaealleagkcpecgQPVEgSPHVETIEEDRERVEELEAELED---LEEEVEEVEERLERA-EDLVEAEDRI 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 462 ETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVK 541
Cdd:PRK02224 512 ERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESL 591
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 542 ERKVNV-------------LQKKIENLQEQLRDKEKQMSSLKERVKSLQADT-----TNTDTALTTLEEALADKERTIER 603
Cdd:PRK02224 592 ERIRTLlaaiadaedeierLREKREALAELNDERRERLAEKRERKRELEAEFdeariEEAREDKERAEEYLEQVEEKLDE 671
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 1720416781 604 LKEQRDRDE------REKQEEIDTYKKDLKDLREKVSLLQGDLSEKEA 645
Cdd:PRK02224 672 LREERDDLQaeigavENELEELEELRERREALENRVEALEALYDEAEE 719
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
273-722 |
1.12e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 59.31 E-value: 1.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 273 EHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQ 352
Cdd:PRK03918 294 EYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEE 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 353 KEKENNMLREEMHRRFENAPDSAKTKALQTVIEMKD--SKISSMERGLRDLEEEIQMLKSN-------GALSSEEREEEM 423
Cdd:PRK03918 374 LERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKitARIGELKKEIKELKKAIEELKKAkgkcpvcGRELTEEHRKEL 453
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 424 kqMEVYRSHSKfmknKIGQVKQELSRKDTELLALQTKLETLTNQFSdskqhiEVLKESLTAKEQRAAILQTEVdalrLRL 503
Cdd:PRK03918 454 --LEEYTAELK----RIEKELKEIEEKERKLRKELRELEKVLKKES------ELIKLKELAEQLKELEEKLKK----YNL 517
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 504 EEketmLNKKTKQIQDMAEEKGTQAGEIHDLKDMLdvkeRKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNT 583
Cdd:PRK03918 518 EE----LEKKAEEYEKLKEKLIKLKGEIKSLKKEL----EKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEE 589
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 584 DTALTTLEE-------ALADKERTIERLKEQRDRDERE---KQEEIDTYKKDLKDLREKVSLLQGDLSEKEASllDIKEH 653
Cdd:PRK03918 590 LEERLKELEpfyneylELKDAEKELEREEKELKKLEEEldkAFEELAETEKRLEELRKELEELEKKYSEEEYE--ELREE 667
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720416781 654 ASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARASPEMSDRIQQLEREISRYKDE 722
Cdd:PRK03918 668 YLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKAL 736
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
288-867 |
1.31e-08 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 59.14 E-value: 1.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 288 LEEMELRIETQKQTLNARDESIKKLLEMLQSKGL---SAKATEEDHERTRRLAEAEmhVHHLESLLEQKEKENNMLREEM 364
Cdd:PRK01156 164 LERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLeleNIKKQIADDEKSHSITLKE--IERLSIEYNNAMDDYNNLKSAL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 365 HRrfenapdsakTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSngalsSEEREEEMKQMEVYRSHSKF-----MKNK 439
Cdd:PRK01156 242 NE----------LSSLEDMKNRYESEIKTAESDLSMELEKNNYYKE-----LEERHMKIINDPVYKNRNYIndyfkYKND 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 440 IGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKEsltakeqraailQTEVDALRLRLEEKETMLNKKTKQIQD 519
Cdd:PRK01156 307 IENKKQILSNIDAEINKYHAIIKKLSVLQKDYNDYIKKKSR------------YDDLNNQILELEGYEMDYNSYLKSIES 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 520 MAEEKGTQAGEIHDLKD----MLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEE--- 592
Cdd:PRK01156 375 LKKKIEEYSKNIERMSAfiseILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGqsv 454
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 593 ----ALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQgdlseKEASLLDIKEHASSLASSGLKKDSR- 667
Cdd:PRK01156 455 cpvcGTTLGEEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLK-----KRKEYLESEEINKSINEYNKIESARa 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 668 -LKTLEIALEQKKEECLKME---SQLKKAHEATLEARASPEMSDRIQ----QLEREISRYKDESSKAQTEVDRLLEILKE 739
Cdd:PRK01156 530 dLEDIKIKINELKDKHDKYEeikNRYKSLKLEDLDSKRTSWLNALAVisliDIETNRSRSNEIKKQLNDLESRLQEIEIG 609
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 740 VENEKNDKDKKIAELERQVKD--------QNKKVANLKHKEQVEKKKSaQMLEEARRREDSLSDSSQQLQVEELLMAMEK 811
Cdd:PRK01156 610 FPDDKSYIDKSIREIENEANNlnnkyneiQENKILIEKLRGKIDNYKK-QIAEIDSIIPDLKEITSRINDIEDNLKKSRK 688
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 1720416781 812 VKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEevlemKQEALLAAISEKD 867
Cdd:PRK01156 689 ALDDAKANRARLESTIEILRTRINELSDRINDINETLE-----SMKKIKKAIGDLK 739
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
480-732 |
1.32e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 58.24 E-value: 1.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 480 ESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQL 559
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 560 RDKEKQmssLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDerekQEEIDTYKKDLKDLREKVSLLQGD 639
Cdd:COG4942 100 EAQKEE---LAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPAR----REQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 640 LSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKkaheatlearaspEMSDRIQQLEREISRY 719
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAE-------------ELEALIARLEAEAAAA 239
|
250
....*....|...
gi 1720416781 720 KDESSKAQTEVDR 732
Cdd:COG4942 240 AERTPAAGFAALK 252
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
473-866 |
1.69e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 58.63 E-value: 1.69e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 473 QHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKgtqagEIHDLKDMLDVKERKVNVLQKKI 552
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQ-----ELEALEAELAELPERLEELEERL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 553 ENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREK 632
Cdd:COG4717 156 EELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENE 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 633 VSLLQ--GDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARASPEMSDRIQ 710
Cdd:COG4717 236 LEAAAleERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEE 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 711 QLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQ--VKDQNKKVANLKHKEQVEKKKS----AQMLE 784
Cdd:COG4717 316 LEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEElqLEELEQEIAALLAEAGVEDEEElraaLEQAE 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 785 EARRREDSLSDSSQQLQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAIS 864
Cdd:COG4717 396 EYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAELL 475
|
..
gi 1720416781 865 EK 866
Cdd:COG4717 476 QE 477
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
259-910 |
1.80e-08 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 58.83 E-value: 1.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 259 VAELTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAE 338
Cdd:TIGR00618 181 LALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQ 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 339 AEMHVHHLESLLEQKEKENNMLREEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSSEE 418
Cdd:TIGR00618 261 LLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSI 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 419 REEEMKQMEVYRSHSKFMK--NKIGQVKQELSRKDTE---LLALQTKLETLTNQFSDSKQHIE----------------- 476
Cdd:TIGR00618 341 EEQRRLLQTLHSQEIHIRDahEVATSIREISCQQHTLtqhIHTLQQQKTTLTQKLQSLCKELDilqreqatidtrtsafr 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 477 VLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQ 556
Cdd:TIGR00618 421 DLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQ 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 557 EQLRDKEKQMSSLKERVKSL------QADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDT--------- 621
Cdd:TIGR00618 501 EEPCPLCGSCIHPNPARQDIdnpgplTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSfsiltqcdn 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 622 -YKKDLKDLREKVSLLQgDLSEKEASLLDIKEHASSLASsgLKKDSRLKTLEIAL-EQKKEECLKMESQLKKAHEATLEA 699
Cdd:TIGR00618 581 rSKEDIPNLQNITVRLQ-DLTEKLSEAEDMLACEQHALL--RKLQPEQDLQDVRLhLQQCSQELALKLTALHALQLTLTQ 657
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 700 RASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDK----DKKIAELERQVKDQNKKVANLKHKEQVE 775
Cdd:TIGR00618 658 ERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLlrelETHIEEYDREFNEIENASSSLGSDLAAR 737
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 776 KKKSAQMLEEARRREDSLSDSS--QQLQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLE 853
Cdd:TIGR00618 738 EDALNQSLKELMHQARTVLKARteAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDED 817
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720416781 854 MKQEALLAAISEKDANIALLELSSSK----KKTQEEVAALKREKDRLVQQLKQQTQNRMKL 910
Cdd:TIGR00618 818 ILNLQCETLVQEEEQFLSRLEEKSATlgeiTHQLLKYEECSKQLAQLTQEQAKIIQLSDKL 878
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
536-752 |
4.29e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 56.70 E-value: 4.29e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 536 DMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREK 615
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 616 QEEIDTYKKDLKDL-------REKVSLLQGDLSEKEASLLDIKEHASSLAS--SGLKKD-SRLKTLEIALEQKKEECLKM 685
Cdd:COG4942 100 EAQKEELAELLRALyrlgrqpPLALLLSPEDFLDAVRRLQYLKYLAPARREqaEELRADlAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720416781 686 ESQLKKAHEATLEARAspEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA 752
Cdd:COG4942 180 LAELEEERAALEALKA--ERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
446-634 |
1.18e-07 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 53.78 E-value: 1.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 446 ELSRKDTELLALQTKLETLtnqfsdsKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLnkktKQIQDMAEEKG 525
Cdd:COG1579 11 DLQELDSELDRLEHRLKEL-------PAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEI----EEVEARIKKYE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 526 TQAGEIHDLKDMldvkerkvNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQAdttntdtALTTLEEALADKERTIERLK 605
Cdd:COG1579 80 EQLGNVRNNKEY--------EALQKEIESLKRRISDLEDEILELMERIEELEE-------ELAELEAELAELEAELEEKK 144
|
170 180
....*....|....*....|....*....
gi 1720416781 606 EQRDRDEREKQEEIDTYKKDLKDLREKVS 634
Cdd:COG1579 145 AELDEELAELEAELEELEAEREELAAKIP 173
|
|
| RBD-FIP |
pfam09457 |
FIP domain; The FIP domain is the Rab11-binding domain (RBD) at the C-terminus of a family of ... |
996-1036 |
4.31e-07 |
|
FIP domain; The FIP domain is the Rab11-binding domain (RBD) at the C-terminus of a family of Rab11-interacting proteins (FIPs). The Rab proteins constitute the largest family of small GTPases (>60 members in mammals). Among them Rab11 is a well characterized regulator of endocytic and recycling pathways. Rab11 associates with a broad range of post-Golgi organelles, including recycling endosomes.
Pssm-ID: 462805 [Multi-domain] Cd Length: 41 Bit Score: 47.33 E-value: 4.31e-07
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1720416781 996 TQEQLQNELEKVEGDNAELQEFANTILQQIADHCPDILEQV 1036
Cdd:pfam09457 1 SRDELQDALQKQEEENRRLEDYIDNILLRIMEHNPSILEVP 41
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
736-892 |
4.94e-07 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 53.63 E-value: 4.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 736 ILKEVENEKNDKdKKIAELErqVKDQNKKVANLKHKEQVEKKKSAQMLEEA-RRREDSLSDSSQQLqveellmamEKVKQ 814
Cdd:PRK12704 43 ILEEAKKEAEAI-KKEALLE--AKEEIHKLRNEFEKELRERRNELQKLEKRlLQKEENLDRKLELL---------EKREE 110
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720416781 815 ELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEallaaisekDANIALLElsSSKKKTQEEVAALKRE 892
Cdd:PRK12704 111 ELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAE---------EAKEILLE--KVEEEARHEAAVLIKE 177
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
335-873 |
6.01e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 53.57 E-value: 6.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 335 RLAEAEMHVHHLESLLEQKEKENNMLREEMHRRFENAPDSAKTKALQTViEMKDSKISsMERGL---RDLEEEIQMLKSN 411
Cdd:pfam05483 248 QITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTK-ELEDIKMS-LQRSMstqKALEEDLQIATKT 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 412 GALSSEEREEEMKQMEVYRSHSKF----MKNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEq 487
Cdd:pfam05483 326 ICQLTEEKEAQMEELNKAKAAHSFvvteFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKE- 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 488 raailqTEVDALRLRLEEKETMLNKKtKQIQDMAEEkgtQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMS 567
Cdd:pfam05483 405 ------VELEELKKILAEDEKLLDEK-KQFEKIAEE---LKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVE 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 568 SLK-----ERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEE-----IDTYKKDLKDLREKVSLLQ 637
Cdd:pfam05483 475 DLKtelekEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEErmlkqIENLEEKEMNLRDELESVR 554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 638 GDLSEK----EASLLDIKEHASSLASSGLKKDSRLKTLEialeqkkEECLKMESQLKKAheatlearaspemSDRIQQLE 713
Cdd:pfam05483 555 EEFIQKgdevKCKLDKSEENARSIEYEVLKKEKQMKILE-------NKCNNLKKQIENK-------------NKNIEELH 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 714 REISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAEL--ERQVKDQNKKVANLKHKEQVEKKKSaqMLEEARRRED 791
Cdd:pfam05483 615 QENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIidNYQKEIEDKKISEEKLLEEVEKAKA--IADEAVKLQK 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 792 SLsDSSQQLQVEELLMAMEKVKQ-----------ELESMKAKLSSTQQSLAEKETHLTNLRAERRKhLEEVLEMKQEALL 860
Cdd:pfam05483 693 EI-DKRCQHKIAEMVALMEKHKHqydkiieerdsELGLYKNKEQEQSSAKAALEIELSNIKAELLS-LKKQLEIEKEEKE 770
|
570
....*....|...
gi 1720416781 861 AAISEKDANIALL 873
Cdd:pfam05483 771 KLKMEAKENTAIL 783
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
641-913 |
7.88e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.53 E-value: 7.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 641 SEKEASLLDIKEHASSLASSGLKKDSRLKTLEiALEQKKEECLKMESQLKKaheatLEARASPEMSDRIQQLEREISRyk 720
Cdd:TIGR02169 170 RKKEKALEELEEVEENIERLDLIIDEKRQQLE-RLRREREKAERYQALLKE-----KREYEGYELLKEKEALERQKEA-- 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 721 desskAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVE-KKKSAQMLEEARRREDSLSDSSQQ 799
Cdd:TIGR02169 242 -----IERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRvKEKIGELEAEIASLERSIAEKERE 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 800 lqveellmaMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQE--ALLAAISEKDANIALL--EL 875
Cdd:TIGR02169 317 ---------LEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEEleDLRAELEEVDKEFAETrdEL 387
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1720416781 876 SSSKKK---TQEEVAALKREKDRLVQQLKQQTQNRMKLMAD 913
Cdd:TIGR02169 388 KDYREKlekLKREINELKRELDRLQEELQRLSEELADLNAA 428
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
445-642 |
1.00e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.00 E-value: 1.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 445 QELSRKDTELLALQTKLETLtnqfsdskQHIEVLKESLTAKEQRAAILQTEVDALRLrlEEKETMLNKKTKQIQDMAEEK 524
Cdd:COG4913 235 DDLERAHEALEDAREQIELL--------EPIRELAERYAAARERLAELEYLRAALRL--WFAQRRLELLEAELEELRAEL 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 525 GTQAGEIHDLKDMLDVKERKVNVLQ--------KKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALAD 596
Cdd:COG4913 305 ARLEAELERLEARLDALREELDELEaqirgnggDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAA 384
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1720416781 597 KERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSE 642
Cdd:COG4913 385 LRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIAS 430
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
437-661 |
1.15e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 52.14 E-value: 1.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 437 KNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEeketmlnkktKQ 516
Cdd:COG3883 22 QKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELG----------ER 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 517 IQDMAEEKGT--------QAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALT 588
Cdd:COG3883 92 ARALYRSGGSvsyldvllGSESFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKA 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720416781 589 TLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLASSG 661
Cdd:COG3883 172 ELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 244
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
346-765 |
1.56e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 52.33 E-value: 1.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 346 LESLLEQKEKENNMLREEMHRrfenapdsaKTKALQTVIEMKDSK---ISSMERGLRDLEEEIQMLKSngalSSEEREEE 422
Cdd:TIGR04523 347 LKKELTNSESENSEKQRELEE---------KQNEIEKLKKENQSYkqeIKNLESQINDLESKIQNQEK----LNQQKDEQ 413
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 423 MKQMEvyrshskfmknkigQVKQELSRKDTELLALQTKLET----LTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDA 498
Cdd:TIGR04523 414 IKKLQ--------------QEKELLEKEIERLKETIIKNNSeikdLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINK 479
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 499 LRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSlqa 578
Cdd:TIGR04523 480 IKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKK--- 556
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 579 dttntdtalTTLEEALADKERTIERLKEQRD---RDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHAS 655
Cdd:TIGR04523 557 ---------ENLEKEIDEKNKEIEELKQTQKslkKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENE 627
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 656 SLASSGLKKDSRLKTLEIALEQKKEECLKMESqlkKAHEATLEARASPEMSDRIQQL----EREISRYKDESSKAQT--- 728
Cdd:TIGR04523 628 KLSSIIKNIKSKKNKLKQEVKQIKETIKEIRN---KWPEIIKKIKESKTKIDDIIELmkdwLKELSLHYKKYITRMIrik 704
|
410 420 430
....*....|....*....|....*....|....*..
gi 1720416781 729 EVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKV 765
Cdd:TIGR04523 705 DLPKLEEKYKEIEKELKKLDEFSKELENIIKNFNKKF 741
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
593-824 |
1.86e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 1.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 593 ALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLE 672
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 673 IALEQKKEECLKM-------------------ESQLKKAHEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRL 733
Cdd:COG4942 97 AELEAQKEELAELlralyrlgrqpplalllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 734 LEILKEVENEKndkdkkiAELERQVKDQNKKVANLKHkeqvEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMAMEKVK 813
Cdd:COG4942 177 EALLAELEEER-------AALEALKAERQKLLARLEK----ELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
250
....*....|.
gi 1720416781 814 QELESMKAKLS 824
Cdd:COG4942 246 AGFAALKGKLP 256
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
484-850 |
4.45e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 51.13 E-value: 4.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 484 AKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKE 563
Cdd:pfam02463 150 MKPERRLEIEEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYL 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 564 KQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLqgdLSEK 643
Cdd:pfam02463 230 DYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSEL---LKLE 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 644 EASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEEclkmESQLKKAHEATLEARASPEMSDRIQQLEREISRYKDES 723
Cdd:pfam02463 307 RRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKEL----KELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLE 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 724 SKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANlKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVE 803
Cdd:pfam02463 383 SERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKK-EELEILEEEEESIELKQGKLTEEKEELEKQELKLL 461
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1720416781 804 ELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEE 850
Cdd:pfam02463 462 KDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSG 508
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
432-900 |
4.99e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 4.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 432 HSKFMKNKIGQVKQELSRKDTELLALQTKLETLtnqfsdsKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEE-KETML 510
Cdd:COG4913 261 AERYAAARERLAELEYLRAALRLWFAQRRLELL-------EAELEELRAELARLEAELERLEARLDALREELDElEAQIR 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 511 NKKTKQIQDMAEEkgtqageIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTdtalttl 590
Cdd:COG4913 334 GNGGDRLEQLERE-------IERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEE------- 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 591 EEALADKERTIERLKEQRDRDEREKQEEID-------TYKKDLKDLREkvsLLQGDLSEKEAS------LLDIKEHAS-- 655
Cdd:COG4913 400 LEALEEALAEAEAALRDLRRELRELEAEIAslerrksNIPARLLALRD---ALAEALGLDEAElpfvgeLIEVRPEEErw 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 656 ---------SLASS----------------GLKKDSRLKTLEIALEQKKEECL---------KMESQLKKAH---EATLE 698
Cdd:COG4913 477 rgaiervlgGFALTllvppehyaaalrwvnRLHLRGRLVYERVRTGLPDPERPrldpdslagKLDFKPHPFRawlEAELG 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 699 ARASPEMSDRIQQLERE--------------------ISRYKDES----SKAQTEVDRLLEILKEVENEKNDKDKKIAEL 754
Cdd:COG4913 557 RRFDYVCVDSPEELRRHpraitragqvkgngtrhekdDRRRIRSRyvlgFDNRAKLAALEAELAELEEELAEAEERLEAL 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 755 ERQVKDQNKKVANLKH-----KEQVEKKKSAQMLEEARRREDSLSDSSQQLqvEELLMAMEKVKQELESMKAKLSSTQQS 829
Cdd:COG4913 637 EAELDALQERREALQRlaeysWDEIDVASAEREIAELEAELERLDASSDDL--AALEEQLEELEAELEELEEELDELKGE 714
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720416781 830 LAEKETHLTNLRAERRKH---LEEVLEMKQEALLAAISEKDANIALLELSSSKKKT-QEEVAALKREKDRLVQQL 900
Cdd:COG4913 715 IGRLEKELEQAEEELDELqdrLEAAEDLARLELRALLEERFAAALGDAVERELRENlEERIDALRARLNRAEEEL 789
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
501-896 |
6.48e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 50.29 E-value: 6.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 501 LRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADT 580
Cdd:PRK01156 169 DKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 581 TNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEID-------------TYKKDLKDLREKVSLLQGDLS------ 641
Cdd:PRK01156 249 DMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIINDpvyknrnyindyfKYKNDIENKKQILSNIDAEINkyhaii 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 642 --------------EKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARASPE-MS 706
Cdd:PRK01156 329 kklsvlqkdyndyiKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDaIK 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 707 DRIQQLEREISRYKDESSKAQTEVDRLLEILKEVE--------------------------------NEKNDKDKKIAEL 754
Cdd:PRK01156 409 KELNEINVKLQDISSKVSSLNQRIRALRENLDELSrnmemlngqsvcpvcgttlgeeksnhiinhynEKKSRLEEKIREI 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 755 ERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRRedslsdssqqlqveellmaMEKVKQELESMKAKLSstqqSLAEKE 834
Cdd:PRK01156 489 EIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNK-------------------IESARADLEDIKIKIN----ELKDKH 545
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720416781 835 THLTNLRAERRKHLEEVLEMKQEALLAAISEkdanIALLELSSSKKKTQEEVAALKREKDRL 896
Cdd:PRK01156 546 DKYEEIKNRYKSLKLEDLDSKRTSWLNALAV----ISLIDIETNRSRSNEIKKQLNDLESRL 603
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
387-748 |
6.53e-06 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 50.43 E-value: 6.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 387 KDSKISSMERGLRDLEEEIQMLKS--NGAL-----SSEEREEEMKQMEvYRSHSKFMKNKIGQVKQELSRKDTELLALQT 459
Cdd:PTZ00108 997 KEYLLGKLERELARLSNKVRFIKHviNGELvitnaKKKDLVKELKKLG-YVRFKDIIKKKSEKITAEEEEGAEEDDEADD 1075
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 460 KLETLTNQ-------------FSDSKQHIEVLKESLTAKEQRAAILQ---------TEVDALRLRLEEKETMLNKKTKQI 517
Cdd:PTZ00108 1076 EDDEEELGaavsydyllsmpiWSLTKEKVEKLNAELEKKEKELEKLKnttpkdmwlEDLDKFEEALEEQEEVEEKEIAKE 1155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 518 QDMAEEKGTQAGEIHDLKDmLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADK 597
Cdd:PTZ00108 1156 QRLKSKTKGKASKLRKPKL-KKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTK 1234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 598 ERTIERLKEQRDRDEREKQEEI------DTYKKDLKDLREKVSLLQGDLSEKEAS--LLDIKEHASSLASSGLKKD-SRL 668
Cdd:PTZ00108 1235 PKKSSVKRLKSKKNNSSKSSEDndefssDDLSKEGKPKNAPKRVSAVQYSPPPPSkrPDGESNGGSKPSSPTKKKVkKRL 1314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 669 KTLEIALEQKKEECLKmESQLKKAHEATLEARASPEmsdriQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKD 748
Cdd:PTZ00108 1315 EGSLAALKKKKKSEKK-TARKKKSKTRVKQASASQS-----SRLLRRPRKKKSDSSSEDDDDSEVDDSEDEDDEDDEDDD 1388
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
565-796 |
6.86e-06 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 50.01 E-value: 6.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 565 QMSSL-KERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEK 643
Cdd:PHA02562 167 EMDKLnKDKIRELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 644 EASLLDIKEHASSLASSGLKKDSRLKTL--EIALEQKKEECL-----------KMESQLKKAHEATLEARaspEMSDRIQ 710
Cdd:PHA02562 247 VMDIEDPSAALNKLNTAAAKIKSKIEQFqkVIKMYEKGGVCPtctqqisegpdRITKIKDKLKELQHSLE---KLDTAID 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 711 QLEREISRYKDESSKA---QTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEAR 787
Cdd:PHA02562 324 ELEEIMDEFNEQSKKLlelKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKY 403
|
250
....*....|..
gi 1720416781 788 RRE---DSLSDS 796
Cdd:PHA02562 404 HRGivtDLLKDS 415
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
708-865 |
7.14e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 48.38 E-value: 7.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 708 RIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVAnlKHKEQVEKKKSAQMLEEAR 787
Cdd:COG1579 18 ELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIK--KYEEQLGNVRNNKEYEALQ 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 788 RREDSLSDSSQQL--QVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEmKQEALLAAISE 865
Cdd:COG1579 96 KEIESLKRRISDLedEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEA-EREELAAKIPP 174
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
344-846 |
7.63e-06 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 50.44 E-value: 7.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 344 HHLESLLEQKEKENNMLREEMHR--RFENAPDSA-----------KTKALQTVIEMKD----------SKISSMERGLRD 400
Cdd:TIGR01612 1129 HHIKALEEIKKKSENYIDEIKAQinDLEDVADKAisnddpeeiekKIENIVTKIDKKKniydeikkllNEIAEIEKDKTS 1208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 401 LEE----EIQMLKSNGALSSEEREEEMKQME-VYRSHSKFMKN--KIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQ 473
Cdd:TIGR01612 1209 LEEvkgiNLSYGKNLGKLFLEKIDEEKKKSEhMIKAMEAYIEDldEIKEKSPEIENEMGIEMDIKAEMETFNISHDDDKD 1288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 474 HievlkeSLTAKEQRAAILQTEVDALRLRLE-EKETMLNKKTKQIQDMAEEKGTQAGEIH----------------DLKD 536
Cdd:TIGR01612 1289 H------HIISKKHDENISDIREKSLKIIEDfSEESDINDIKKELQKNLLDAQKHNSDINlylneianiynilklnKIKK 1362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 537 MLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKslqadttnTDTALTTLEEALADKE--RTIERLKEQRDRDERE 614
Cdd:TIGR01612 1363 IIDEVKEYTKEIEENNKNIKDELDKSEKLIKKIKDDIN--------LEECKSKIESTLDDKDidECIKKIKELKNHILSE 1434
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 615 kQEEIDTYKKDLKDLREKVSLLQGDL-------------------SEKEASLLDIKEHASSLASSGLKKDSRLKTLE--- 672
Cdd:TIGR01612 1435 -ESNIDTYFKNADENNENVLLLFKNIemadnksqhilkikkdnatNDHDFNINELKEHIDKSKGCKDEADKNAKAIEknk 1513
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 673 IALEQKKEECLKMES-----------------------QLKKAH-EATLEARASPEmsdRIQQLEREISRYKDESSKAQT 728
Cdd:TIGR01612 1514 ELFEQYKKDVTELLNkysalaiknkfaktkkdseiiikEIKDAHkKFILEAEKSEQ---KIKEIKKEKFRIEDDAAKNDK 1590
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 729 EVDRLLEILKEVENEKNdKDKKIAELERQVKDqnkkvaNLKHKEQVEKKKSaqmleearrredSLSDSSQQLQVEELLMA 808
Cdd:TIGR01612 1591 SNKAAIDIQLSLENFEN-KFLKISDIKKKIND------CLKETESIEKKIS------------SFSIDSQDTELKENGDN 1651
|
570 580 590
....*....|....*....|....*....|....*...
gi 1720416781 809 MEKVKQELESMKAKlsstQQSLAEKETHLTNLRAERRK 846
Cdd:TIGR01612 1652 LNSLQEFLESLKDQ----KKNIEDKKKELDELDSEIEK 1685
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
598-801 |
1.24e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 598 ERTIERLKEQRD--RDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDikehasslassglkkdSRLKTLEIAL 675
Cdd:COG4913 241 HEALEDAREQIEllEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLE----------------AELEELRAEL 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 676 EQKKEECLKMESQLKKAHEATLEARASPEMS--DRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAE 753
Cdd:COG4913 305 ARLEAELERLEARLDALREELDELEAQIRGNggDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAA 384
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1720416781 754 LERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQ 801
Cdd:COG4913 385 LRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLE 432
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
533-903 |
1.33e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 49.29 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 533 DLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLqadttntDTALTTLEEALADKERTIERLKEQRDRDE 612
Cdd:PRK03918 169 EVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEI-------SSELPELREELEKLEKEVKELEELKEEIE 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 613 rEKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSlassgLKKDSRLKTLEIALEQKKEECLKMESQLKKA 692
Cdd:PRK03918 242 -ELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKE-----LKELKEKAEEYIKLSEFYEEYLDELREIEKR 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 693 HEatlearaspEMSDRIQQLEREISRYKDESSKaqtevdrlleiLKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKE 772
Cdd:PRK03918 316 LS---------RLEEEINGIEERIKELEEKEER-----------LEELKKKLKELEKRLEELEERHELYEEAKAKKEELE 375
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 773 QVEKKKSAQMLEEARRredslsdssqqlQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVL 852
Cdd:PRK03918 376 RLKKRLTGLTPEKLEK------------ELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGR 443
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1720416781 853 EMKQEALLAAISEKDANIAllELSSSKKKTQEEVAALKREKDRLVQQLKQQ 903
Cdd:PRK03918 444 ELTEEHRKELLEEYTAELK--RIEKELKEIEEKERKLRKELRELEKVLKKE 492
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
536-783 |
1.37e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 48.86 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 536 DMLDVKE-RKVNVLQK-KIENLQEQLRDKEKQMSSLKERVK-------SLQADTTNTDTALTTLEEALADKERTIERLKE 606
Cdd:PHA02562 158 DLLDISVlSEMDKLNKdKIRELNQQIQTLDMKIDHIQQQIKtynknieEQRKKNGENIARKQNKYDELVEEAKTIKAEIE 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 607 QRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLS--EKEASLL-----------DIKEHASSLAssglKKDSRLKTLEI 673
Cdd:PHA02562 238 ELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEqfQKVIKMYekggvcptctqQISEGPDRIT----KIKDKLKELQH 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 674 ALEQKKEECLKMESQLKKAHEATLEARaspEMSDRIQQLEREISRYKDESSKAQTEVDRLleilkevENEKNDKDKKIAE 753
Cdd:PHA02562 314 SLEKLDTAIDELEEIMDEFNEQSKKLL---ELKNKISTNKQSLITLVDKAKKVKAAIEEL-------QAEFVDNAEELAK 383
|
250 260 270
....*....|....*....|....*....|
gi 1720416781 754 LERQVKDQNKKVANLKhKEQVEKKKSAQML 783
Cdd:PHA02562 384 LQDELDKIVKTKSELV-KEKYHRGIVTDLL 412
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
725-1026 |
1.40e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 49.28 E-value: 1.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 725 KAQTEVDRLLEILKEVENEKN------DKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQM-LEEARRREDSLSDSS 797
Cdd:TIGR02168 183 RTRENLDRLEDILNELERQLKslerqaEKAERYKELKAELRELELALLVLRLEELREELEELQEeLKEAEEELEELTAEL 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 798 Q--QLQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRaERRKHLEEVLEMKQEALLaaisekdaniallEL 875
Cdd:TIGR02168 263 QelEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILR-ERLANLERQLEELEAQLE-------------EL 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 876 SSSKKKTQEEVAALKREKDRLvQQLKQQTQNRMKLMADNYEDDHfRSSRSNQTNHKPSPDQIIQPLLELDQNRSKLKLYI 955
Cdd:TIGR02168 329 ESKLDELAEELAELEEKLEEL-KEELESLEAELEELEAELEELE-SRLEELEEQLETLRSKVAQLELQIASLNNEIERLE 406
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720416781 956 GHLTALCHDRDPLILRGLTppasynADGEQAAWENELQKMTQEQLQNELEKVEGDNAELQEFANTILQQIA 1026
Cdd:TIGR02168 407 ARLERLEDRRERLQQEIEE------LLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELE 471
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
434-686 |
1.65e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 48.86 E-value: 1.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 434 KFMKNKIGQVKQELSRKDTELLALQTKLETLTNqfsdskqHIEVLKESltaKEQRAAILQTEVDALRLRLEEKETMLNKK 513
Cdd:PHA02562 170 KLNKDKIRELNQQIQTLDMKIDHIQQQIKTYNK-------NIEEQRKK---NGENIARKQNKYDELVEEAKTIKAEIEEL 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 514 TKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQE---------QLRDKEKQMSSLKERVKSLQADttntd 584
Cdd:PHA02562 240 TDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEKggvcptctqQISEGPDRITKIKDKLKELQHS----- 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 585 talttleealadkertIERLKEQRDrDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLASSGLKK 664
Cdd:PHA02562 315 ----------------LEKLDTAID-ELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDN 377
|
250 260
....*....|....*....|....
gi 1720416781 665 DSRLKTLEIALEQKKEEC--LKME 686
Cdd:PHA02562 378 AEELAKLQDELDKIVKTKseLVKE 401
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
445-577 |
1.86e-05 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 48.04 E-value: 1.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 445 QELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEK 524
Cdd:PRK09039 46 REISGKDSALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEGRAGELAQEL 125
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720416781 525 GTQAGEIHDlkdmldvKERKVNVLQKKIENLQEQL------------RDKEKQM----------SSLKERVKSLQ 577
Cdd:PRK09039 126 DSEKQVSAR-------ALAQVELLNQQIAALRRQLaaleaaldasekRDRESQAkiadlgrrlnVALAQRVQELN 193
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
260-903 |
3.25e-05 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 47.82 E-value: 3.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 260 AELTEENFQRLhaehERQAKELFLLRKTLEEMELRIETQKQTLNARdesikkllemlqskGLSAKATEEDHERTRR-LAE 338
Cdd:pfam07111 65 AELISRQLQEL----RRLEEEVRLLRETSLQQKMRLEAQAMELDAL--------------AVAEKAGQAEAEGLRAaLAG 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 339 AEMHVHHLESLLEQKEKENNMLREEMHrrfenapdSAKTKALQTVIEMKDSKISSMERGLRDLEeeiqmlksngalssEE 418
Cdd:pfam07111 127 AEMVRKNLEEGSQRELEEIQRLHQEQL--------SSLTQAHEEALSSLTSKAEGLEKSLNSLE--------------TK 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 419 REEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKL-ETLTNQFSDSKQHIE--VLKESLTAKEQRAAILQTE 495
Cdd:pfam07111 185 RAGEAKQLAEAQKEAELLRKQLSKTQEELEAQVTLVESLRKYVgEQVPPEVHSQTWELErqELLDTMQHLQEDRADLQAT 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 496 VDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEI-HDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQmssLKERVK 574
Cdd:pfam07111 265 VELLQVRVQSLTHMLALQEEELTRKIQPSDSLEPEFpKKCRSLLNRWREKVFALMVQLKAQDLEHRDSVKQ---LRGQVA 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 575 SLQADTTNTDTALTTLEEALADK--ERTIERLK--------EQRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKE 644
Cdd:pfam07111 342 ELQEQVTSQSQEQAILQRALQDKaaEVEVERMSakglqmelSRAQEARRRQQQQTASAEEQLKFVVNAMSSTQIWLETTM 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 645 ASLLDIKEHASSLA---SSGLKKDSRLKTL---EIALEQkkeecLKMESQLKKAHEATLEARASPEMSDRIQQLEREISR 718
Cdd:pfam07111 422 TRVEQAVARIPSLSnrlSYAVRKVHTIKGLmarKVALAQ-----LRQESCPPPPPAPPVDADLSLELEQLREERNRLDAE 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 719 YKDESSKAQTEVDRLLEilkEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSdSSQ 798
Cdd:pfam07111 497 LQLSAHLIQQEVGRARE---QGEAERQQLSEVAQQLEQELQRAQESLASVGQQLEVARQGQQESTEEAASLRQELT-QQQ 572
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 799 QLQVEELlmaMEKVKQELESMKAKLSSTQQSLAEKethltnlraeRRKHLEEVLEMKQEALLAAiSEKDANIALLELSSS 878
Cdd:pfam07111 573 EIYGQAL---QEKVAEVETRLREQLSDTKRRLNEA----------RREQAKAVVSLRQIQHRAT-QEKERNQELRRLQDE 638
|
650 660 670
....*....|....*....|....*....|
gi 1720416781 879 KKKTQEE-----VAALKREKDRLVQQLKQQ 903
Cdd:pfam07111 639 ARKEEGQrlarrVQELERDKNLMLATLQQE 668
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
707-888 |
3.69e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.13 E-value: 3.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 707 DRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEA 786
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARAL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 787 RRREDSLS---------------------------DSSQQLQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTN 839
Cdd:COG3883 96 YRSGGSVSyldvllgsesfsdfldrlsalskiadaDADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEA 175
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1720416781 840 LRAERRKHLEEvLEMKQEALLAAISEKDANIALLELSSSKKKTQEEVAA 888
Cdd:COG3883 176 QQAEQEALLAQ-LSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAA 223
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
352-905 |
5.58e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 47.53 E-value: 5.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 352 QKEKENNMLREEMH-RRFEN-APDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSSEEREEEMKQMEvy 429
Cdd:pfam12128 219 NRQQVEHWIRDIQAiAGIMKiRPEFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLD-- 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 430 rshsKFMKNKIGQVKQELSRKDTELLALQTKLETLTnqfSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETM 509
Cdd:pfam12128 297 ----DQWKEKRDELNGELSAADAAVAKDRSELEALE---DQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGK 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 510 LNKKTKQIQDMAEEKGTQ-AGEIHDLKDMLD-VKERKV-------NVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADT 580
Cdd:pfam12128 370 HQDVTAKYNRRRSKIKEQnNRDIAGIKDKLAkIREARDrqlavaeDDLQALESELREQLEAGKLEFNEEEYRLKSRLGEL 449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 581 TNTDTALTTLEEALADKERTIERLKEQRDRDE--REKQEEIDTYKKDLKDLREKVSL------------------LQGDL 640
Cdd:pfam12128 450 KLRLNQATATPELLLQLENFDERIERAREEQEaaNAEVERLQSELRQARKRRDQASEalrqasrrleerqsaldeLELQL 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 641 SEKEASLL--------DIKEHASSLASSGLKKDSRLKTLEIALEQKKEECL--------KMESQLKKAHEATLEARASP- 703
Cdd:pfam12128 530 FPQAGTLLhflrkeapDWEQSIGKVISPELLHRTDLDPEVWDGSVGGELNLygvkldlkRIDVPEWAASEEELRERLDKa 609
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 704 -----EMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVE--------NEKNDKDKKIAELERQVKDQNKKVANLKH 770
Cdd:pfam12128 610 eealqSAREKQAAAEEQLVQANGELEKASREETFARTALKNARldlrrlfdEKQSEKDKKNKALAERKDSANERLNSLEA 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 771 KEQVEKKKSAQMLEEARRredslsdssqqlQVEELLMAMEKVKQELES-MKAKLSSTQQSLAEKET----HLTNLRAERR 845
Cdd:pfam12128 690 QLKQLDKKHQAWLEEQKE------------QKREARTEKQAYWQVVEGaLDAQLALLKAAIAARRSgakaELKALETWYK 757
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720416781 846 KHL-----EEVLEMKQEALLAAISEKDANIALLE-------------LSSSKKKTQEEVAALKREKDRLVQQLKQQTQ 905
Cdd:pfam12128 758 RDLaslgvDPDVIAKLKREIRTLERKIERIAVRRqevlryfdwyqetWLQRRPRLATQLSNIERAISELQQQLARLIA 835
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
228-887 |
5.62e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 47.38 E-value: 5.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 228 TIQALQDELRIQRDLNQLFQQDSSsrtgepCVAELTEENFQRLHAEHERQakelfllrKTLEEMELRIETQKQTLNARDE 307
Cdd:COG5022 818 CIIKLQKTIKREKKLRETEEVEFS------LKAEVLIQKFGRSLKAKKRF--------SLLKKETIYLQSAQRVELAERQ 883
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 308 SIKKLLEMLQSKGLSAKATEEDhertrrlaeaemhvhhlESLLEQKEKENNMLREEMHRRfenapdSAKTKALQTVIEMK 387
Cdd:COG5022 884 LQELKIDVKSISSLKLVNLELE-----------------SEIIELKKSLSSDLIENLEFK------TELIARLKKLLNNI 940
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 388 DSKI-SSMERGLRDLEEEIQMLKSNGALSSEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKLETL-- 464
Cdd:COG5022 941 DLEEgPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLke 1020
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 465 TNQFSDSKQHIEVLKESLTAKEQRaailQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKgtqageihDLKDMLDVKERK 544
Cdd:COG5022 1021 LPVEVAELQSASKIISSESTELSI----LKPLQKLKGLLLLENNQLQARYKALKLRRENS--------LLDDKQLYQLES 1088
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 545 VNVLQKKIENLQEQLRDKEkqmSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDE-------REKQE 617
Cdd:COG5022 1089 TENLLKTINVKDLEVTNRN---LVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQleldglfWEANL 1165
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 618 EIDTYKKDLKDLREK----VSLLQGDLSEKEASLLDIKEHASSLAS---SGLKKDSRLKTL--EIALEQKKEECLKMESQ 688
Cdd:COG5022 1166 EALPSPPPFAALSEKrlyqSALYDEKSKLSSSEVNDLKNELIALFSkifSGWPRGDKLKKLisEGWVPTEYSTSLKGFNN 1245
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 689 LKKAhEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEIL-----------------KEVEN-EKNDKDKK 750
Cdd:COG5022 1246 LNKK-FDTPASMSNEKLLSLLNSIDNLLSSYKLEEEVLPATINSLLQYInvglfnalrtkasslrwKSATEvNYNSEELD 1324
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 751 IAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRRedSLSDSSQQLQVEELLMAMEKVKQEL---ESMKAKLSStq 827
Cdd:COG5022 1325 DWCREFEISDVDEELEELIQAVKVLQLLKDDLNKLDELL--DACYSLNPAEIQNLKSRYDPADKENnlpKEILKKIEA-- 1400
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720416781 828 QSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAIS--EKDANIALLELSSSKKKTQEEVA 887
Cdd:COG5022 1401 LLIKQELQLSLEGKDETEVHLSEIFSEEKSLISLDRNsiYKEEVLSSLSALLTKEKIALLDR 1462
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
436-763 |
5.84e-05 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 46.82 E-value: 5.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 436 MKNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTK 515
Cdd:COG4372 43 LQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQK 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 516 QIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERvkSLQADTTNTDTALTTLEEALA 595
Cdd:COG4372 123 ERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEA--EAEQALDELLKEANRNAEKEE 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 596 DKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIAL 675
Cdd:COG4372 201 ELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEI 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 676 EQKKEECLKMESQLKKAHEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELE 755
Cdd:COG4372 281 AALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVGLLDNDVLELLS 360
|
....*...
gi 1720416781 756 RQVKDQNK 763
Cdd:COG4372 361 KGAEAGVA 368
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
591-744 |
6.13e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 47.16 E-value: 6.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 591 EEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEkeaslldikehasslassglkKDSRLKT 670
Cdd:COG2433 387 EKELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEE---------------------KDERIER 445
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720416781 671 LEIALEQKKEEclkMESQLKKAHEATLEARaspemsdRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEK 744
Cdd:COG2433 446 LERELSEARSE---ERREIRKDREISRLDR-------EIERLERELEEERERIEELKRKLERLKELWKLEHSGE 509
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
398-818 |
7.39e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.68 E-value: 7.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 398 LRDLEEEIQMLKSNGALSSE---EREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDT--ELLALQTKLETLTNQFSDSK 472
Cdd:COG4717 73 LKELEEELKEAEEKEEEYAElqeELEELEEELEELEAELEELREELEKLEKLLQLLPLyqELEALEAELAELPERLEELE 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 473 QHIEVLKEsltaKEQRAAILQTEVDALRLRLEEKETMLNKKT-KQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKK 551
Cdd:COG4717 153 ERLEELRE----LEEELEELEAELAELQEELEELLEQLSLATeEELQDLAEELEELQQRLAELEEELEEAQEELEELEEE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 552 IENLQEQLRDKEKQMSSLKERVK--------SLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYK 623
Cdd:COG4717 229 LEQLENELEAAALEERLKEARLLlliaaallALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQ 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 624 KDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQ--LKKAHEATLEA-R 700
Cdd:COG4717 309 ALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAalLAEAGVEDEEElR 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 701 ASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEIL--KEVENEKNDKDKKIAELERQVKDQNKKVANLKHkeQVEKKK 778
Cdd:COG4717 389 AALEQAEEYQELKEELEELEEQLEELLGELEELLEALdeEELEEELEELEEELEELEEELEELREELAELEA--ELEQLE 466
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1720416781 779 SAQMLEEARRREDSLSDSSQQLQVEE-----LLMAMEKVKQELES 818
Cdd:COG4717 467 EDGELAELLQELEELKAELRELAEEWaalklALELLEEAREEYRE 511
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
373-726 |
8.00e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.89 E-value: 8.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 373 DSAKTKALQTVIEMKDSKissmERGLRDLEEEIQMLKSNGALSSEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDT 452
Cdd:pfam02463 168 KRKKKEALKKLIEETENL----AELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQ 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 453 ELLALqtkletlTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDalrlrlEEKETMLNKKTKQIQDMAEEKGTQAGEIH 532
Cdd:pfam02463 244 ELLRD-------EQEEIESSKQEIEKEEEKLAQVLKENKEEEKEK------KLQEEELKLLAKEEEELKSELLKLERRKV 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 533 DLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDE 612
Cdd:pfam02463 311 DDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAA 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 613 REKQE------EIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKME 686
Cdd:pfam02463 391 KLKEEelelksEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKS 470
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1720416781 687 SQLKKAHEATLEARASPEMSDRIQQLEREISRYKDESSKA 726
Cdd:pfam02463 471 EDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLK 510
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
609-804 |
1.07e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.98 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 609 DRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQ 688
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 689 LKKAH------EATLEARASPEMSDRIQQLER-------EISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELE 755
Cdd:COG3883 95 LYRSGgsvsylDVLLGSESFSDFLDRLSALSKiadadadLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELE 174
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1720416781 756 RQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEE 804
Cdd:COG3883 175 AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAA 223
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
549-822 |
1.19e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.27 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 549 QKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLK-EQRDRD-EREKQEEIDTYKKDL 626
Cdd:pfam17380 298 QERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRqEERKRElERIRQEEIAMEISRM 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 627 KDLrEKVSLLQGDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARASPEMS 706
Cdd:pfam17380 378 REL-ERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQ 456
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 707 DRIQQLER-----------EISRYKDESSKAQTEVDRLLEILKEVENEKN---DKDKKIAELERQVKDQNKKVANLKHKE 772
Cdd:pfam17380 457 ERQQQVERlrqqeeerkrkKLELEKEKRDRKRAEEQRRKILEKELEERKQamiEEERKRKLLEKEMEERQKAIYEEERRR 536
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1720416781 773 QVEKKKSAQMLEEARRR--EDSLSDSSQQLQVEELLMAMEKVKQELESMKAK 822
Cdd:pfam17380 537 EAEEERRKQQEMEERRRiqEQMRKATEERSRLEAMEREREMMRQIVESEKAR 588
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
688-896 |
1.23e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.06 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 688 QLKKAHEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLeiLKEVENEKNDKDKKIAELERQVKDQNKKVAN 767
Cdd:COG4913 236 DLERAHEALEDAREQIELLEPIRELAERYAAARERLAELEYLRAALR--LWFAQRRLELLEAELEELRAELARLEAELER 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 768 LKhkeqvekkksaQMLEEARRREDSLSDSSQQLQVEELlmamEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKH 847
Cdd:COG4913 314 LE-----------ARLDALREELDELEAQIRGNGGDRL----EQLEREIERLERELEERERRRARLEALLAALGLPLPAS 378
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1720416781 848 LEEVLEMKQEA--LLAAISEKDANI--ALLELSSSKKKTQEEVAALKREKDRL 896
Cdd:COG4913 379 AEEFAALRAEAaaLLEALEEELEALeeALAEAEAALRDLRRELRELEAEIASL 431
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
265-916 |
1.23e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.12 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 265 ENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKllEMLQSKGLSAKATEEDHERTRRLAEAEMHVH 344
Cdd:pfam02463 234 LNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKE--KKLQEEELKLLAKEEEELKSELLKLERRKVD 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 345 HLESLLEQKEKENNMLREEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSSEEREEEMK 424
Cdd:pfam02463 312 DEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAK 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 425 QMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKLETLtnqfsdskqhIEVLKESLTAKEQRAAILQTEVDALRLRLE 504
Cdd:pfam02463 392 LKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEI----------LEEEEESIELKQGKLTEEKEELEKQELKLL 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 505 EKETMLnkktKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRdkeKQMSSLKERVKSLQADTTNTD 584
Cdd:pfam02463 462 KDELEL----KKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLL---ALIKDGVGGRIISAHGRLGDL 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 585 TALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREkvslLQGDLSEKEASLLDIKEHASSLASSGLKK 664
Cdd:pfam02463 535 GVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLR----LLIPKLKLPLKSIAVLEIDPILNLAQLDK 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 665 DSRLKTLEIALEQKKEEclkmesQLKKAHEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEK 744
Cdd:pfam02463 611 ATLEADEDDKRAKVVEG------ILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEK 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 745 NDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMAMEkvkqELESMKAKLS 824
Cdd:pfam02463 685 AESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEE----EEEKSRLKKE 760
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 825 STQQSLAEKETHLTNLRAERRKHLEEVLEMKQEallaaisekdaniallelssSKKKTQEEVAALKREKDRLVQQLKQQT 904
Cdd:pfam02463 761 EKEEEKSELSLKEKELAEEREKTEKLKVEEEKE--------------------EKLKAQEEELRALEEELKEEAELLEEE 820
|
650
....*....|..
gi 1720416781 905 QNRMKLMADNYE 916
Cdd:pfam02463 821 QLLIEQEEKIKE 832
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
604-804 |
1.66e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 1.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 604 LKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSE--KEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEE 681
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEfrQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEAR 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 682 CLKMESQLKKAHEATLEARASPEMSD---RIQQLEREI----SRYKDESSK---AQTEVDRLL-EILKEVENEKNDKDKK 750
Cdd:COG3206 242 LAALRAQLGSGPDALPELLQSPVIQQlraQLAELEAELaelsARYTPNHPDviaLRAQIAALRaQLQQEAQRILASLEAE 321
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 751 IAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRRE------DSLSDSSQQLQVEE 804
Cdd:COG3206 322 LEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEvarelyESLLQRLEEARLAE 381
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
504-953 |
1.86e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.48 E-value: 1.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 504 EEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNT 583
Cdd:pfam05483 229 EEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 584 DTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLldikehasslassgLK 663
Cdd:pfam05483 309 MSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRL--------------EK 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 664 KDSRLKTLEIALEQKKEECLKMeSQLKKAHEATLEARASPEMSDriQQLEREISRYKDESSKAQTEVDRLLEILKEVENE 743
Cdd:pfam05483 375 NEDQLKIITMELQKKSSELEEM-TKFKNNKEVELEELKKILAED--EKLLDEKKQFEKIAEELKGKEQELIFLLQAREKE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 744 KNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEArrreDSLSDSSQQLQVEELLMAMEKVKQELESMKAKL 823
Cdd:pfam05483 452 IHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHC----DKLLLENKELTQEASDMTLELKKHQEDIINCKK 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 824 SSTQ-----QSLAEKETHLTNLRAERRKHLEEvlemKQEALLAAISEKDANIALLELSSSKKKTQEEVAALKrekdrlVQ 898
Cdd:pfam05483 528 QEERmlkqiENLEEKEMNLRDELESVREEFIQ----KGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENK------CN 597
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1720416781 899 QLKQQTQNRMKLMADNYEDDHFRSSRSNQTNHKPSPDQIIQPLLELDQNRSKLKL 953
Cdd:pfam05483 598 NLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKF 652
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
546-767 |
2.59e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 44.77 E-value: 2.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 546 NVLQKKIENLQEQ----LRDKEKQMSSLKErvkslqadttntdtalttleEALADKERTIERLKEQRDRDEREKQEEIdt 621
Cdd:PRK12704 27 KIAEAKIKEAEEEakriLEEAKKEAEAIKK--------------------EALLEAKEEIHKLRNEFEKELRERRNEL-- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 622 yKKDLKDLREKVSLLqgdlsEKEASLLDikehasslassglKKDSRLKTLEIALEQKKEECLKMESQLKKAHEatleara 701
Cdd:PRK12704 85 -QKLEKRLLQKEENL-----DRKLELLE-------------KREEELEKKEKELEQKQQELEKKEEELEELIE------- 138
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720416781 702 spemsDRIQQLEReISRYKDESSKAQtevdrlleILKEVENE-KNDKDKKIAELERQVKDQNKKVAN 767
Cdd:PRK12704 139 -----EQLQELER-ISGLTAEEAKEI--------LLEKVEEEaRHEAAVLIKEIEEEAKEEADKKAK 191
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
264-562 |
2.70e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.21 E-value: 2.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 264 EENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTL-NARDESIKKLLEMLQSKGLSAKATEED----HERTRRL-A 337
Cdd:pfam12128 610 EEALQSAREKQAAAEEQLVQANGELEKASREETFARTALkNARLDLRRLFDEKQSEKDKKNKALAERkdsaNERLNSLeA 689
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 338 EAEMHVHHLESLLEQKE---KENNMLREEMHRRFENAPDS-----------------AKTKALQTviEMKDS-------- 389
Cdd:pfam12128 690 QLKQLDKKHQAWLEEQKeqkREARTEKQAYWQVVEGALDAqlallkaaiaarrsgakAELKALET--WYKRDlaslgvdp 767
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 390 -KISSMERGLRDLEEEIQMLKSNGalsSEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQtkletltnqf 468
Cdd:pfam12128 768 dVIAKLKREIRTLERKIERIAVRR---QEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLARLI---------- 834
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 469 SDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMlnkktKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVL 548
Cdd:pfam12128 835 ADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATL-----KEDANSEQAQGSIGERLAQLEDLKLKRDYLSESV 909
|
330
....*....|....
gi 1720416781 549 QKKIENLQEQLRDK 562
Cdd:pfam12128 910 KKYVEHFKNVIADH 923
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
507-728 |
3.08e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 44.44 E-value: 3.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 507 ETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQ------ADT 580
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERReelgerARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 581 TNTDTALTTLEEALADKE------RTIERLKEQRDRDerekQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHA 654
Cdd:COG3883 95 LYRSGGSVSYLDVLLGSEsfsdflDRLSALSKIADAD----ADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAK 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720416781 655 SSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARASPEMSDRIQQLEREISRYKDESSKAQT 728
Cdd:COG3883 171 AELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 244
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
515-652 |
3.34e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.37 E-value: 3.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 515 KQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTleEAL 594
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEY--EAL 94
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720416781 595 ADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKE 652
Cdd:COG1579 95 QKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELA 152
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
420-904 |
3.48e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 44.73 E-value: 3.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 420 EEEMKQMEV-YRSHSKFMKNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAI---LQTE 495
Cdd:pfam05557 15 QNEKKQMELeHKRARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEAlnkKLNE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 496 VDALRLRLEEKETMLNKKTKQIQDMAE----EKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQ---LRDKEKQMSS 568
Cdd:pfam05557 95 KESQLADAREVISCLKNELSELRRQIQraelELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQqssLAEAEQRIKE 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 569 LkERVKSLQADTTNTDTALTTLEEALADKERTIERLkeqrdrdeREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEasll 648
Cdd:pfam05557 175 L-EFEIQSQEQDSEIVKNSKSELARIPELEKELERL--------REHNKHLNENIENKLLLKEEVEDLKRKLEREE---- 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 649 dikehasslassglKKDSRLKTLEIALEQKKEEclkMESQLKKAHEATLEARASPEMSDRIQQLEREISRYKDESSKAQT 728
Cdd:pfam05557 242 --------------KYREEAATLELEKEKLEQE---LQSWVKLAQDTGLNLRSPEDLSRRIEQLQQREIVLKEENSSLTS 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 729 EVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLE--EARRREDSLSDSSQQL--QVEE 804
Cdd:pfam05557 305 SARQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKERDGYRAilESYDKELTMSNYSPQLleRIEE 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 805 LLMAMEKVKQELESMKAKLsstqqSLAEKETHLTNLRAerrkhleEVLEMKQEALLAAISEKDANIALLELSSSKKKTQE 884
Cdd:pfam05557 385 AEDMTQKMQAHNEEMEAQL-----SVAEEELGGYKQQA-------QTLERELQALRQQESLADPSYSKEEVDSLRRKLET 452
|
490 500
....*....|....*....|...
gi 1720416781 885 ---EVAALKREKDRLVQQLKQQT 904
Cdd:pfam05557 453 lelERQRLREQKNELEMELERRC 475
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
599-913 |
3.82e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.75 E-value: 3.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 599 RTIERLKEQRDRDEREKQEEIDTYKKDL-------------KDLREKVSLLQGDLSEKEASLLDikeHASSLASSGLKKD 665
Cdd:PTZ00121 1027 EKIEELTEYGNNDDVLKEKDIIDEDIDGnhegkaeakahvgQDEGLKPSYKDFDFDAKEDNRAD---EATEEAFGKAEEA 1103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 666 SRLKTLEIALEQKKEECLKMESQLKKAHEA--------TLEARAS-----PEMSDRIQQLER-EISRYKDESSKAQtEVD 731
Cdd:PTZ00121 1104 KKTETGKAEEARKAEEAKKKAEDARKAEEArkaedarkAEEARKAedakrVEIARKAEDARKaEEARKAEDAKKAE-AAR 1182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 732 RLLEILKEVENEKNDKDKKI-----AELERQVKD-----QNKKVANLKHKEQVEKKKsaqmlEEARRREDsLSDSSQQLQ 801
Cdd:PTZ00121 1183 KAEEVRKAEELRKAEDARKAeaarkAEEERKAEEarkaeDAKKAEAVKKAEEAKKDA-----EEAKKAEE-ERNNEEIRK 1256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 802 VEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLR-AERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKK 880
Cdd:PTZ00121 1257 FEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKkAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKK 1336
|
330 340 350
....*....|....*....|....*....|...
gi 1720416781 881 KTQEEVAALKREKDRLVQQLKQQTQNRMKLMAD 913
Cdd:PTZ00121 1337 KAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAA 1369
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
392-738 |
4.32e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 44.12 E-value: 4.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 392 SSMERGLRDLEEEIQMLKSNGALSSEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKLETLTNQFSDS 471
Cdd:pfam07888 34 NRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEEL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 472 KQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKK 551
Cdd:pfam07888 114 SEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKE 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 552 IENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEeidtykkdlkdLRE 631
Cdd:pfam07888 194 FQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEE-----------LSS 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 632 KVSLLQGDLSEKEASLLDIKEHASSLASSGLK-KDSRLK------TLEIALEQKKEECLKMESQLKKAHEATLEARASPe 704
Cdd:pfam07888 263 MAAQRDRTQAELHQARLQAAQLTLQLADASLAlREGRARwaqereTLQQSAEADKDRIEKLSAELQRLEERLQEERMER- 341
|
330 340 350
....*....|....*....|....*....|....
gi 1720416781 705 msdriQQLEREISRYKDESSKAQTEVDRLLEILK 738
Cdd:pfam07888 342 -----EKLEVELGREKDCNRVQLSESRRELQELK 370
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
148-607 |
4.36e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 44.34 E-value: 4.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 148 DNTIMDLQTQLKEVLR---------ENDLLRKDVEVKESKLSSSMNSIKT-FWSPELKKERALRKDEASKITIWKEQYRV 217
Cdd:pfam15921 323 ESTVSQLRSELREAKRmyedkieelEKQLVLANSELTEARTERDQFSQESgNLDDQLQKLLADLHKREKELSLEKEQNKR 402
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 218 VQEENQHMQMTIQALQDEL--------RIQRDLNQLFQQDSSSRTGEPCVAELTEENFQRLHAEHERQAKELFLLRKTLE 289
Cdd:pfam15921 403 LWDRDTGNSITIDHLRRELddrnmevqRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVE 482
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 290 EMElrieTQKQTLNARDESIKKLLEMLQSKGLSAKATeeDHERTRRLAEAEMHVHHLESLLEQKEKENNMLREEMHRRFE 369
Cdd:pfam15921 483 ELT----AKKMTLESSERTVSDLTASLQEKERAIEAT--NAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQ 556
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 370 NAPDSAKTKALQTVIEMKDSKI--------------SSMERGLRDLEEEIQMLKsngaLSSEEREEEMKQMEVYRSHSKF 435
Cdd:pfam15921 557 MAEKDKVIEILRQQIENMTQLVgqhgrtagamqvekAQLEKEINDRRLELQEFK----ILKDKKDAKIRELEARVSDLEL 632
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 436 MKNKIGQVKQELSRK----DTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRaaiLQTEVDALRLRLEEKETMLN 511
Cdd:pfam15921 633 EKVKLVNAGSERLRAvkdiKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEE---METTTNKLKMQLKSAQSELE 709
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 512 KKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLE 591
Cdd:pfam15921 710 QTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMA 789
|
490
....*....|....*.
gi 1720416781 592 EALADKERTIERLKEQ 607
Cdd:pfam15921 790 GELEVLRSQERRLKEK 805
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
419-910 |
4.44e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 44.40 E-value: 4.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 419 REEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLA----LQTKLETLTNQFSDS----------KQHIEVLKESLTA 484
Cdd:pfam01576 3 QEEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEeknaLQEQLQAETELCAEAeemrarlaarKQELEEILHELES 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 485 K----EQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLR 560
Cdd:pfam01576 83 RleeeEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERIS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 561 DKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERT---IERLKEQRDRDEREKQEEIDTYKKDLKDLREKV---- 633
Cdd:pfam01576 163 EFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGrqeLEKAKRKLEGESTDLQEQIAELQAQIAELRAQLakke 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 634 -----------------SLLQGDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLkmESQLKKAHEAT 696
Cdd:pfam01576 243 eelqaalarleeetaqkNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELE--DTLDTTAAQQE 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 697 LEARASPEMSDRIQQLEREISRY----KDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHK- 771
Cdd:pfam01576 321 LRSKREQEVTELKKALEEETRSHeaqlQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAk 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 772 ---EQVEKKKSAQMLE------EARRREDSLSDSSQQLQVE-----ELLMAME----KVKQELESMKAKLSSTQQSLAEK 833
Cdd:pfam01576 401 qdsEHKRKKLEGQLQElqarlsESERQRAELAEKLSKLQSElesvsSLLNEAEgkniKLSKDVSSLESQLQDTQELLQEE 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 834 ETHLTNLRA------ERRKHLEEVLEMKQEALLAAisEKDANIALLELSSSKKKTQEEVAA----------LKREKDRLV 897
Cdd:pfam01576 481 TRQKLNLSTrlrqleDERNSLQEQLEEEEEAKRNV--ERQLSTLQAQLSDMKKKLEEDAGTlealeegkkrLQRELEALT 558
|
570
....*....|...
gi 1720416781 898 QQLKQQTQNRMKL 910
Cdd:pfam01576 559 QQLEEKAAAYDKL 571
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
707-909 |
4.63e-04 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 43.91 E-value: 4.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 707 DRIQQLEREISRYKDESSKAQTEVDRLLEILKEVEnEKNDKDKKIAELERQVKDqnkkvanLKHKEQVeKKKSAQ----- 781
Cdd:COG0497 165 RAWRALKKELEELRADEAERARELDLLRFQLEELE-AAALQPGEEEELEEERRR-------LSNAEKL-REALQEaleal 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 782 ---------MLEEARRREDSLSDSSQQLQ-----VEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKH 847
Cdd:COG0497 236 sggeggaldLLGQALRALERLAEYDPSLAelaerLESALIELEEAASELRRYLDSLEFDPERLEEVEERLALLRRLARKY 315
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720416781 848 ---LEEVLEMKQEAL--LAAISEKDANIALLElssskkktqEEVAALKREKDRLVQQLkqqTQNRMK 909
Cdd:COG0497 316 gvtVEELLAYAEELRaeLAELENSDERLEELE---------AELAEAEAELLEAAEKL---SAARKK 370
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
707-909 |
4.98e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.96 E-value: 4.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 707 DRIQQLE--REISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLE 784
Cdd:pfam17380 351 ERIRQEErkRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQE 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 785 EARRREdslsdssQQLQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLE------EVLEMKQEA 858
Cdd:pfam17380 431 EARQRE-------VRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRaeeqrrKILEKELEE 503
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1720416781 859 LLAAISEKDANIALLElssskKKTQEEVAALKREKDRLVQQLKQQTQNRMK 909
Cdd:pfam17380 504 RKQAMIEEERKRKLLE-----KEMEERQKAIYEEERRREAEEERRKQQEME 549
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
375-574 |
5.12e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 5.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 375 AKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSSEEREEEMKQMEVYRSHSKFMKNKIgqvkQELSRKDTEL 454
Cdd:COG4942 48 KEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRAL----YRLGRQPPLA 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 455 LALQTKletltnQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDL 534
Cdd:COG4942 124 LLLSPE------DFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAER 197
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1720416781 535 KDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVK 574
Cdd:COG4942 198 QKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
617-829 |
5.88e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 44.13 E-value: 5.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 617 EEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLASSGLKKDSrLKTLEIALEQKkeeclkmESQLKKAHEAT 696
Cdd:PRK11281 73 DKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLS-LRQLESRLAQT-------LDQLQNAQNDL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 697 LEA------------RASPEMSD---RIQQLEREISRYKDESSK-----------------AQTEVDRLL----EILKEV 740
Cdd:PRK11281 145 AEYnsqlvslqtqpeRAQAALYAnsqRLQQIRNLLKGGKVGGKAlrpsqrvllqaeqallnAQNDLQRKSlegnTQLQDL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 741 ENEKND-KDKKIAELERQVKD-QNkkVANLKHKEQVEKK-KSAQMLEEA-RRREDSL----SDSSQQLQvEELLMAMEK- 811
Cdd:PRK11281 225 LQKQRDyLTARIQRLEHQLQLlQE--AINSKRLTLSEKTvQEAQSQDEAaRIQANPLvaqeLEINLQLS-QRLLKATEKl 301
|
250 260
....*....|....*....|.
gi 1720416781 812 ---VKQELEsMKAKLSSTQQS 829
Cdd:PRK11281 302 ntlTQQNLR-VKNWLDRLTQS 321
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
209-421 |
7.00e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.46 E-value: 7.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 209 TIWKEQYRVVQEENQHMQMTIQALQDELRIQRDlnqlFQQDSSSRTGEPcVAELTE------ENFQRLHAEHERQAKELF 282
Cdd:PHA02562 170 KLNKDKIRELNQQIQTLDMKIDHIQQQIKTYNK----NIEEQRKKNGEN-IARKQNkydelvEEAKTIKAEIEELTDELL 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 283 LLRKTLEEME---LRIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENNM 359
Cdd:PHA02562 245 NLVMDIEDPSaalNKLNTAAAKIKSKIEQFQKVIKMYEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAIDE 324
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720416781 360 LREEMHRRFENapdSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSSEEREE 421
Cdd:PHA02562 325 LEEIMDEFNEQ---SKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAK 383
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
277-528 |
8.32e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 8.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 277 QAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQskglsaKATEEDHERTRRLAEAEMHVHHLESLLEQKEKE 356
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLA------ALERRIAALARRIRALEQELAALEAELAELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 357 NNMLREEMHRRFENapdsaktkalqtviemkdskissMERGLRDLEEEIQMLKSNGALSSEEREEEMKQMEVYRSHSKFM 436
Cdd:COG4942 92 IAELRAELEAQKEE-----------------------LAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPAR 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 437 KNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQ 516
Cdd:COG4942 149 REQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEAL 228
|
250
....*....|..
gi 1720416781 517 IQDMAEEKGTQA 528
Cdd:COG4942 229 IARLEAEAAAAA 240
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
272-744 |
8.56e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.22 E-value: 8.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 272 AEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGL---SAKATEEDHERTRRLAEAEMHVHHLES 348
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLyqeLEALEAELAELPERLEELEERLEELRE 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 349 LLEQKEKENNMLREEMHRRFEnapdsaktkALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSSEEREEEMKQMEV 428
Cdd:COG4717 161 LEEELEELEAELAELQEELEE---------LLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQ 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 429 YRShskfmKNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKesltakeqRAAILQTEVDALRLRLEEKET 508
Cdd:COG4717 232 LEN-----ELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAG--------VLFLVLGLLALLFLLLAREKA 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 509 MLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKslqadttntdtalt 588
Cdd:COG4717 299 SLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQ-------------- 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 589 tleeaLADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASslASSGLKKDSRL 668
Cdd:COG4717 365 -----LEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALD--EEELEEELEEL 437
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720416781 669 KTLEIALEQKKEECLKMESQLKKAHEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEK 744
Cdd:COG4717 438 EEELEELEEELEELREELAELEAELEQLEEDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREER 513
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
531-850 |
1.20e-03 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 42.69 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 531 IHDLKDMLDVKERKVNV-LQKKIENLQ-EQLRD----KEKQMSSLKERVKS-LQADTTNTDTALTTLEEALADKERTIE- 602
Cdd:NF033838 71 LSEIQKSLDKRKHTQNVaLNKKLSDIKtEYLYElnvlKEKSEAELTSKTKKeLDAAFEQFKKDTLEPGKKVAEATKKVEe 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 603 ---RLKEQRDRDERekQEEIDTYKKDLKDLREkvsllqGDLSEKEASLLDIKEHASslassGLKKDSRLKTLEIALEQKK 679
Cdd:NF033838 151 aekKAKDQKEEDRR--NYPTNTYKTLELEIAE------SDVEVKKAELELVKEEAK-----EPRDEEKIKQAKAKVESKK 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 680 EECLKMESQLKKAHEATLEARASPEMSDRIQQLEREISRYKDES-SKAQTEVDRLLEILKEVENEKNDKDKKIAE--LER 756
Cdd:NF033838 218 AEATRLEKIKTDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPkRRAKRGVLGEPATPDKKENDAKSSDSSVGEetLPS 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 757 QVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMAMEKVKQELESMKAKLSSTQ----QSLAE 832
Cdd:NF033838 298 PSLKPEKKVAEAEKKVEEAKKKAKDQKEEDRRNYPTNTYKTLELEIAESDVKVKEAELELVKEEAKEPRNEekikQAKAK 377
|
330 340
....*....|....*....|....
gi 1720416781 833 KE------THLTNLRAERRKHLEE 850
Cdd:NF033838 378 VEskkaeaTRLEKIKTDRKKAEEE 401
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
551-798 |
1.56e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 42.73 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 551 KIENLQEQLRDKEKQMSSLKER-VKSLQADTTNTDTALTTLEEALADKER-TIERLKEQRDRDEREKQEEIDTYKKdlKD 628
Cdd:PTZ00108 1103 KVEKLNAELEKKEKELEKLKNTtPKDMWLEDLDKFEEALEEQEEVEEKEIaKEQRLKSKTKGKASKLRKPKLKKKE--KK 1180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 629 LREKVSLLQGDLSEKEASLLDIKEHASSLASSGLKK---DSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARASPEM 705
Cdd:PTZ00108 1181 KKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKksnSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEF 1260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 706 SDRIQQLEREIsryKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQN------KKVANLKHKEQVEKKKS 779
Cdd:PTZ00108 1261 SSDDLSKEGKP---KNAPKRVSAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVKKRLegslaaLKKKKKSEKKTARKKKS 1337
|
250 260
....*....|....*....|....*...
gi 1720416781 780 AQMLEEA---------RRREDSLSDSSQ 798
Cdd:PTZ00108 1338 KTRVKQAsasqssrllRRPRKKKSDSSS 1365
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
536-781 |
1.64e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 536 DMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREK 615
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARAL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 616 QEEIDTYK--------KDLKDLREKVSLLQgDLSEKEASLLDikehasslassglkkdsRLKTLEIALEQKKEECLKMES 687
Cdd:COG3883 96 YRSGGSVSyldvllgsESFSDFLDRLSALS-KIADADADLLE-----------------ELKADKAELEAKKAELEAKLA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 688 QLKKAHEatlearaspEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVAN 767
Cdd:COG3883 158 ELEALKA---------ELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAA 228
|
250
....*....|....
gi 1720416781 768 LKHKEQVEKKKSAQ 781
Cdd:COG3883 229 AAAAAAAAAAAAAA 242
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
592-764 |
1.74e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 1.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 592 EALADKERTIERLKEQRDRdEREKQEEIDTYKKDLKDLREKVSLLQGDLS--EKEASLLDIKEHASSLASSGLKKDSRLK 669
Cdd:COG4717 71 KELKELEEELKEAEEKEEE-YAELQEELEELEEELEELEAELEELREELEklEKLLQLLPLYQELEALEAELAELPERLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 670 TLEI---ALEQKKEECLKMESQLKKAHE--ATLEARASPEMSDRIQQLEREISRykdesskAQTEVDRLLEILKEVENEK 744
Cdd:COG4717 150 ELEErleELRELEEELEELEAELAELQEelEELLEQLSLATEEELQDLAEELEE-------LQQRLAELEEELEEAQEEL 222
|
170 180
....*....|....*....|
gi 1720416781 745 NDKDKKIAELERQVKDQNKK 764
Cdd:COG4717 223 EELEEELEQLENELEAAALE 242
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
264-894 |
1.88e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.47 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 264 EENFQRLHAEHERQAKELFLLRKTLEEME---LRIETQKQTLNARdesIKKLlemlqskglsakateedHERTRRLAEAE 340
Cdd:pfam01576 88 EERSQQLQNEKKKMQQHIQDLEEQLDEEEaarQKLQLEKVTTEAK---IKKL-----------------EEDILLLEDQN 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 341 MHVHHLESLLEQK--EKENNMLREEmhrrfenapdsAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSSEE 418
Cdd:pfam01576 148 SKLSKERKLLEERisEFTSNLAEEE-----------EKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGE 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 419 REEEMKQMEVyrshskfMKNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVlkesltakeqraaiLQTEVDA 498
Cdd:pfam01576 217 STDLQEQIAE-------LQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRE--------------LEAQISE 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 499 LRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDV-------KERKVNVLQKKIEnlqEQLRDKEKQMSSLKE 571
Cdd:pfam01576 276 LQEDLESERAARNKAEKQRRDLGEELEALKTELEDTLDTTAAqqelrskREQEVTELKKALE---EETRSHEAQLQEMRQ 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 572 R----VKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREkvslLQGDLSEKEASL 647
Cdd:pfam01576 353 KhtqaLEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQE----LQARLSESERQR 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 648 LDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHE-ATLEARASPEMSDRIQQLEreisrykDESSKA 726
Cdd:pfam01576 429 AELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQElLQEETRQKLNLSTRLRQLE-------DERNSL 501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 727 QTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANL---KHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQ-- 801
Cdd:pfam01576 502 QEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALeegKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQqe 581
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 802 VEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKK 881
Cdd:pfam01576 582 LDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKETRALSLARALEEALEAKEELERTNKQ 661
|
650
....*....|...
gi 1720416781 882 TQEEVAALKREKD 894
Cdd:pfam01576 662 LRAEMEDLVSSKD 674
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
335-898 |
1.99e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.47 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 335 RLAEAEMHVHHLESLLEQKEKENNMLREEMHRRFE--------NAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQ 406
Cdd:pfam01576 20 RQQKAESELKELEKKHQQLCEEKNALQEQLQAETElcaeaeemRARLAARKQELEEILHELESRLEEEEERSQQLQNEKK 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 407 MLKSNGALSSEEREEEMK-----QMEVYRSHSKFMKnkigqvkqelsrKDTELLALQTKLETLTNQFSDSKQHIEVLKES 481
Cdd:pfam01576 100 KMQQHIQDLEEQLDEEEAarqklQLEKVTTEAKIKK------------LEEDILLLEDQNSKLSKERKLLEERISEFTSN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 482 LTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDmldvkerKVNVLQKKIENLQEQLRD 561
Cdd:pfam01576 168 LAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQE-------QIAELQAQIAELRAQLAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 562 KEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQ---EEIDTYKKDLKDLREKVSLLQG 638
Cdd:pfam01576 241 KEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRdlgEELEALKTELEDTLDTTAAQQE 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 639 DLSEKEASLLDIKE--------HASSLASSGLKKDSRLKTLEIALEQKK--------------EECLKMESQLKKAHEAT 696
Cdd:pfam01576 321 LRSKREQEVTELKKaleeetrsHEAQLQEMRQKHTQALEELTEQLEQAKrnkanlekakqaleSENAELQAELRTLQQAK 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 697 LEARAS--------PEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQnkkvanl 768
Cdd:pfam01576 401 QDSEHKrkklegqlQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDT------- 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 769 khKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHL 848
Cdd:pfam01576 474 --QELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQ 551
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 1720416781 849 EEVlemkqEALLAAISEKDAniALLELSSSKKKTQEEVAALKREKDRLVQ 898
Cdd:pfam01576 552 REL-----EALTQQLEEKAA--AYDKLEKTKNRLQQELDDLLVDLDHQRQ 594
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
728-900 |
2.27e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.68 E-value: 2.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 728 TEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHkeqvEKKKSAQMLEEARRREDSLSDSSQQLQVEELLM 807
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEK----EIKRLELEIEEVEARIKKYEEQLGNVRNNKEYE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 808 AMEKvkqELESMKAKLSSTQQSLAEKETHLTNLRAErRKHLEEVLEMKQEALLAAISEKDANIAllelssskkKTQEEVA 887
Cdd:COG1579 93 ALQK---EIESLKRRISDLEDEILELMERIEELEEE-LAELEAELAELEAELEEKKAELDEELA---------ELEAELE 159
|
170
....*....|...
gi 1720416781 888 ALKREKDRLVQQL 900
Cdd:COG1579 160 ELEAEREELAAKI 172
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
662-852 |
2.73e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.68 E-value: 2.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 662 LKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARAspEMSDRIQQLEREISRYKDESSKAQTEVD--RLLEILKE 739
Cdd:COG4717 59 FKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELE--ELEEELEELEAELEELREELEKLEKLLQllPLYQELEA 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 740 VENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQL--QVEELLMAMEKVKQELE 817
Cdd:COG4717 137 LEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLaeELEELQQRLAELEEELE 216
|
170 180 190
....*....|....*....|....*....|....*
gi 1720416781 818 SMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVL 852
Cdd:COG4717 217 EAQEELEELEEELEQLENELEAAALEERLKEARLL 251
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
334-643 |
2.90e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 2.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 334 RRLAEAEMHVHHLESLLEQKEKEnnmlREEMHRRFEnapdsaktkALQTVIEMKDSKI--SSMERGLRDLEEEIQML-KS 410
Cdd:COG4913 617 AELAELEEELAEAEERLEALEAE----LDALQERRE---------ALQRLAEYSWDEIdvASAEREIAELEAELERLdAS 683
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 411 NGALSS--EEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKLETLTNQFS-DSKQHIEVLKESLTAKEQ 487
Cdd:COG4913 684 SDDLAAleEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARlELRALLEERFAAALGDAV 763
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 488 RAAI---LQTEVDALRLRLEEKETMLNKKTKQIQ----DMAEEKGTQAGEIHDLKDMLDvkerkvNVLQKKIENLQEQLR 560
Cdd:COG4913 764 ERELrenLEERIDALRARLNRAEEELERAMRAFNrewpAETADLDADLESLPEYLALLD------RLEEDGLPEYEERFK 837
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 561 DKEKQMSslKERVKSLQADTtntdtalttlEEALADKERTIERLKE-------QRDRD-----EREKQEEIDTYKKDLKD 628
Cdd:COG4913 838 ELLNENS--IEFVADLLSKL----------RRAIREIKERIDPLNDslkripfGPGRYlrleaRPRPDPEVREFRQELRA 905
|
330
....*....|....*
gi 1720416781 629 LREKVSLLQGDLSEK 643
Cdd:COG4913 906 VTSGASLFDEELSEA 920
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
630-844 |
3.74e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 3.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 630 REKVSLLQGDLSEKEASLLDIKEHASSLASSgLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARASPEMSDRI 709
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAE-LDALQERREALQRLAEYSWDEIDVASAEREIAELEAELERLDASSDDL 687
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 710 QQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVkDQNKKVANLKHKEQVEKKKSAQMLEEARRR 789
Cdd:COG4913 688 AALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRL-EAAEDLARLELRALLEERFAAALGDAVERE 766
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720416781 790 -EDSLSDSSQQLQ------VEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAER 844
Cdd:COG4913 767 lRENLEERIDALRarlnraEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRLEEDG 828
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
504-613 |
4.78e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.92 E-value: 4.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 504 EEKETMLNKKTKQIQDMAEEKGTQAG-EIHDLKDMLdvkERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTN 582
Cdd:PRK12704 38 EEAKRILEEAKKEAEAIKKEALLEAKeEIHKLRNEF---EKELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEK 114
|
90 100 110
....*....|....*....|....*....|..
gi 1720416781 583 TDTALTTLEEALADKERTIERL-KEQRDRDER 613
Cdd:PRK12704 115 KEKELEQKQQELEKKEEELEELiEEQLQELER 146
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
335-737 |
6.00e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 40.49 E-value: 6.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 335 RLAEAEMHVHHLESLLEQKEKENNMLREEMHRRFENAPD-----SAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLK 409
Cdd:pfam05557 3 ELIESKARLSQLQNEKKQMELEHKRARIELEKKASALKRqldreSDRNQELQKRIRLLEKREAEAEEALREQAELNRLKK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 410 SNGALSSEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKLEtltnqfsDSKQHIEVLKESLTAKEQRA 489
Cdd:pfam05557 83 KYLEALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELE-------ELQERLDLLKAKASEAEQLR 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 490 AILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAgEIHDLKDMldvkERKVNVLQKKIENLQEQLRDKEkqmsSL 569
Cdd:pfam05557 156 QNLEKQQSSLAEAEQRIKELEFEIQSQEQDSEIVKNSKS-ELARIPEL----EKELERLREHNKHLNENIENKL----LL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 570 KERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREK---------QEEIDTYKKDLKDLREKVSLLQGDL 640
Cdd:pfam05557 227 KEEVEDLKRKLEREEKYREEAATLELEKEKLEQELQSWVKLAQDTGlnlrspedlSRRIEQLQQREIVLKEENSSLTSSA 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 641 SEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALE--QKKEECLKMESQLKKA-----HEATLEARASPEMSDRIQQLE 713
Cdd:pfam05557 307 RQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRrlQRRVLLLTKERDGYRAilesyDKELTMSNYSPQLLERIEEAE 386
|
410 420
....*....|....*....|....
gi 1720416781 714 REISRYKDESSKAQTEVDRLLEIL 737
Cdd:pfam05557 387 DMTQKMQAHNEEMEAQLSVAEEEL 410
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
415-905 |
6.23e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 40.72 E-value: 6.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 415 SSEEREE---EMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAI 491
Cdd:TIGR00618 161 KSKEKKEllmNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQ 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 492 LQTEVDALRLRLEEKETmLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDvKERKVNVLQKKIENLQEQLRDKEKQMSSLKE 571
Cdd:TIGR00618 241 SHAYLTQKREAQEEQLK-KQQLLKQLRARIEELRAQEAVLEETQERIN-RARKAAPLAAHIKAVTQIEQQAQRIHTELQS 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 572 RVKSLqADTTNTDTALTTLEEALADKERTIERLKEQRD--RDEREKQEEIDTYKKDLKDLREKVSLLQGD---LSEKEAS 646
Cdd:TIGR00618 319 KMRSR-AKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIhiRDAHEVATSIREISCQQHTLTQHIHTLQQQkttLTQKLQS 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 647 LLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEEClkmesQLKKAHEATLEARASPEMSDRIQQ--LEREISRYKDESS 724
Cdd:TIGR00618 398 LCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQ-----ELQQRYAELCAAAITCTAQCEKLEkiHLQESAQSLKERE 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 725 KAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKV---ANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQ 801
Cdd:TIGR00618 473 QQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPnpaRQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLT 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 802 VE-ELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLE---MKQEALLAAISEKDANIALLELSS 877
Cdd:TIGR00618 553 SErKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEaedMLACEQHALLRKLQPEQDLQDVRL 632
|
490 500
....*....|....*....|....*...
gi 1720416781 878 SKKKTQEEVAALKREKDRLVQQLKQQTQ 905
Cdd:TIGR00618 633 HLQQCSQELALKLTALHALQLTLTQERV 660
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
725-916 |
6.25e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.39 E-value: 6.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 725 KAQTEVDRLLEILKE--VENEKNDKDKKIAELERQVKDQNKKVanlkhkEQVEKKksaqmLEEARRREDSLSDSSQQLQV 802
Cdd:COG3206 149 LAAAVANALAEAYLEqnLELRREEARKALEFLEEQLPELRKEL------EEAEAA-----LEEFRQKNGLVDLSEEAKLL 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 803 EellmamekvkQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEK--DANIALLELSSSKK 880
Cdd:COG3206 218 L----------QQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSPVIQQLRAQlaELEAELAELSARYT 287
|
170 180 190
....*....|....*....|....*....|....*.
gi 1720416781 881 KTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYE 916
Cdd:COG3206 288 PNHPDVIALRAQIAALRAQLQQEAQRILASLEAELE 323
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
666-823 |
6.34e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.53 E-value: 6.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 666 SRLKTLEIALEQKKEECLKMESQLKKahEATLEARAspEMSDRIQQLEREISRYKDESSKAQTevdRLLEILKEVENEKN 745
Cdd:PRK12704 31 AKIKEAEEEAKRILEEAKKEAEAIKK--EALLEAKE--EIHKLRNEFEKELRERRNELQKLEK---RLLQKEENLDRKLE 103
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720416781 746 DKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEarrredsLSDSSqQLQVEELL-MAMEKVKQELESMKAKL 823
Cdd:PRK12704 104 LLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQE-------LERIS-GLTAEEAKeILLEKVEEEARHEAAVL 174
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
276-851 |
6.57e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 40.54 E-value: 6.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 276 RQAKELFLLRKTLEEMELRIETQKQTLNAR-DESIKKLLEMLQ-----------SKGLSAKATEEDHERTRRLAEAEMHV 343
Cdd:pfam01576 324 KREQEVTELKKALEEETRSHEAQLQEMRQKhTQALEELTEQLEqakrnkanlekAKQALESENAELQAELRTLQQAKQDS 403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 344 HHLESLLEQKEKENNMLREEMHRRFENAPDsaKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSSEEREEEM 423
Cdd:pfam01576 404 EHKRKKLEGQLQELQARLSESERQRAELAE--KLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEET 481
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 424 KQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRL 503
Cdd:pfam01576 482 RQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQL 561
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 504 EEKETMLNKKTKQiqdmaeeKGTQAGEIHDLKDMLDVKERKVNVLQKKienlqeqlrdkekqmsslkervkslqadttnt 583
Cdd:pfam01576 562 EEKAAAYDKLEKT-------KNRLQQELDDLLVDLDHQRQLVSNLEKK-------------------------------- 602
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 584 dtaLTTLEEALADKERTIERLKEQRDRDE---REKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASLLDIKEHASSLASS 660
Cdd:pfam01576 603 ---QKKFDQMLAEEKAISARYAEERDRAEaeaREKETRALSLARALEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKN 679
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 661 GLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLeaRASPEMSDRIQQLEREIS-RYKDESSKAQTEVDRLLEILKE 739
Cdd:pfam01576 680 VHELERSKRALEQQVEEMKTQLEELEDELQATEDAKL--RLEVNMQALKAQFERDLQaRDEQGEEKRRQLVKQVRELEAE 757
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 740 VENEKNDKD-----KKIAELERQVKDQNKKVANLKHKEQVE--KKKSAQMLEEARRREDSlsdssqQLQVEELLMAMEKV 812
Cdd:pfam01576 758 LEDERKQRAqavaaKKKLELDLKELEAQIDAANKGREEAVKqlKKLQAQMKDLQRELEEA------RASRDEILAQSKES 831
|
570 580 590
....*....|....*....|....*....|....*....
gi 1720416781 813 KQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEV 851
Cdd:pfam01576 832 EKKLKNLEAELLQLQEDLAASERARRQAQQERDELADEI 870
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
474-742 |
6.78e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 40.30 E-value: 6.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 474 HIEVLKESLTAKEQRAAI-LQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAgeIHDLKDMLDVKERKVNVLQKKI 552
Cdd:PRK05771 32 HIEDLKEELSNERLRKLRsLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEEL--IKDVEEELEKIEKEIKELEEEI 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 553 ENLQEQLRDKEKQMSSLkERVKSLqadttntdtalTTLEEALADKERTIERLKE-QRDRDEREKQEEIDTYKKDLKDLRE 631
Cdd:PRK05771 110 SELENEIKELEQEIERL-EPWGNF-----------DLDLSLLLGFKYVSVFVGTvPEDKLEELKLESDVENVEYISTDKG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 632 KVSLLQGDLSEKEASLLDIkehassLASSGLKKD--SRLKTLEIALEQKKEEclkmESQLKKaheatlearaspemsdRI 709
Cdd:PRK05771 178 YVYVVVVVLKELSDEVEEE------LKKLGFERLelEEEGTPSELIREIKEE----LEEIEK----------------ER 231
|
250 260 270
....*....|....*....|....*....|...
gi 1720416781 710 QQLEREISRYKDESSKAQTEVDRLLEILKEVEN 742
Cdd:PRK05771 232 ESLLEELKELAKKYLEELLALYEYLEIELERAE 264
|
|
| PRK08475 |
PRK08475 |
F0F1 ATP synthase subunit B; Validated |
846-917 |
6.98e-03 |
|
F0F1 ATP synthase subunit B; Validated
Pssm-ID: 236272 [Multi-domain] Cd Length: 167 Bit Score: 38.46 E-value: 6.98e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720416781 846 KHLEEVlemkQEALLAAISEKDAniALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYED 917
Cdd:PRK08475 60 KRLEEI----QEKLKESKEKKED--ALKKLEEAKEKAELIVETAKKEAYILTQKIEKQTKDDIENLIKSFEE 125
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
694-909 |
7.23e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.39 E-value: 7.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 694 EATLEARASpEMSDRIQQLEREISRYKDESSKAQTEVDRLLEilkevENEKNDKDKKIAELERQVKDQNKKVANLKHKEQ 773
Cdd:COG3206 163 EQNLELRRE-EARKALEFLEEQLPELRKELEEAEAALEEFRQ-----KNGLVDLSEEAKLLLQQLSELESQLAEARAELA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 774 VEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVL- 852
Cdd:COG3206 237 EAEARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILa 316
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 853 --EMKQEALLAAISEKDANIALLELSSSK-KKTQEEVAALKREKDRLVQQLkQQTQNRMK 909
Cdd:COG3206 317 slEAELEALQAREASLQAQLAQLEARLAElPELEAELRRLEREVEVARELY-ESLLQRLE 375
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
448-805 |
7.46e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 40.33 E-value: 7.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 448 SRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQ 527
Cdd:COG5185 204 VNSIKESETGNLGSESTLLEKAKEIINIEEALKGFQDPESELEDLAQTSDKLEKLVEQNTDLRLEKLGENAESSKRLNEN 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 528 AGEihdlkdmldvkerkvnvLQKKIENLQEQLRDKEKQMSslKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQ 607
Cdd:COG5185 284 ANN-----------------LIKQFENTKEKIAEYTKSID--IKKATESLEEQLAAAEAEQELEESKRETETGIQNLTAE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 608 RDRDEREKQEEIDTYKKDLKDLREKVsllqgDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMES 687
Cdd:COG5185 345 IEQGQESLTENLEAIKEEIENIVGEV-----ELSKSSEELDSFKDTIESTKESLDEIPQNQRGYAQEILATLEDTLKAAD 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720416781 688 QLKKAHEATLEARAS--PEMSDRIQQLEREI--SRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNK 763
Cdd:COG5185 420 RQIEELQRQIEQATSsnEEVSKLLNELISELnkVMREADEESQSRLEEAYDEINRSVRSKKEDLNEELTQIESRVSTLKA 499
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1720416781 764 KVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEEL 805
Cdd:COG5185 500 TLEKLRAKLERQLEGVRSKLDQVAESLKDFMRARGYAHILAL 541
|
|
| |
