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Conserved domains on  [gi|1907068048|ref|XP_036019108|]
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adhesion G protein-coupled receptor B3 isoform X3 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmB2_BAI3 cd15989
brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 ...
835-1127 0e+00

brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


:

Pssm-ID: 320655 [Multi-domain]  Cd Length: 293  Bit Score: 569.32  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  835 ESSGTPSVTLIVGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFF 914
Cdd:cd15989      1 ESSGTPSVTLIVGCGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKGICTMTTAFLHFF 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  915 FLASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGGLLYAFVGPAAA 994
Cdd:cd15989     81 FLASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVAISMGFTKAKGYGTPHYCWLSLEGGLLYAFVGPAAA 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  995 VVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCGVVSTTALSATTASNAMASLWSSCVVLPLLAL 1074
Cdd:cd15989    161 VVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCGVVSTTALSATTASNAMASLWSSCVVLPLLAL 240
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1907068048 1075 TWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRN 1127
Cdd:cd15989    241 TWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRN 293
AGRB_N super family cl41168
Adhesion GPCR B N-terminal region; This region is found at the N-terminus of various adhesion ...
30-201 1.21e-63

Adhesion GPCR B N-terminal region; This region is found at the N-terminus of various adhesion G-protein coupled receptor B proteins. This region contains 10 cysteine residues that probably form disulphide bonds.


The actual alignment was detected with superfamily member pfam19188:

Pssm-ID: 465991  Cd Length: 177  Bit Score: 214.26  E-value: 1.21e-63
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048   30 CSTLVKGVIYGSYSVSEMFPKNFTNCTWTLENPDPTKYSIYLKFSKKDLSCSNFSLLAYQFDHFSHEKIKDLLRKNH--S 107
Cdd:pfam19188    3 CSTLVQGVLYGSFSLRDLFPTNASGCSWTLENPDPTKYTLYLKFTKPTQSCLPFSPRLLQFDHYLENTTRTYLGRESfdE 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  108 IMQLCSSKNAFVFLQYDKNFIQIRRVFPTDFPGLQKKVEEDQKSFFEFLVLNKVSPSQFGCHVLCTWLESCLKSENGrTE 187
Cdd:pfam19188   83 VVELCDASSPFSFLEFDKNFVQLCLLAEPRGDPESVVPGPSGDFKVEVLVINNENPSQFTCGVLCRWLEECLSASTS-SR 161
                          170
                   ....*....|....
gi 1907068048  188 SCGIMYTKCTCPQH 201
Cdd:pfam19188  162 PCGIMQTPCICPGT 175
GAIN pfam16489
GPCR-Autoproteolysis INducing (GAIN) domain; The GAIN a domain of alpha-helices and ...
557-757 6.12e-46

GPCR-Autoproteolysis INducing (GAIN) domain; The GAIN a domain of alpha-helices and beta-strands that is found in cell-adhesion GPCRs and precedes the GPS motif where the autoproteolysis occurs, family, pfam01825. The full GAIN domain, comprises the GPS and the GAIN, in cell-adhesion GPCRs, and is the functional unit for autoproteolysis. The GPS motif at the end of the GAIN domain is an ancient domain that exists in primitive ancestor organizms, and the full GAIN + GPS is conserved in all cell-adhesion GPCRs and all PKD1-related proteins.


:

Pssm-ID: 465137  Cd Length: 205  Bit Score: 164.36  E-value: 6.12e-46
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  557 GMSQVTKTLLDLTQRKNFYAGDLLVSVEILRNVTDTFKRASYIPASDGVQNFFQIVSNLLDEENKEKWEDAQQIYPGSIE 636
Cdd:pfam16489    1 GAKELARELRNATRHGPLYGGDVLTAVELLSQLFDLLATQDATLSNAFLENFVQTVSNLLDPENRESWEDLQQTERGTAA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  637 --LMQVIEDFIHIVGMGMMDFQNSYLMTGNVVASIQKL--PAASVLTDINFPMKGRKGmvdwarNSEDRVVIPKSIFtpv 712
Cdd:pfam16489   81 tkLLRTLEEYALLLAQNMKYLTPFTIVTPNIVLSVDRLdtHNFKGARFPRFPMKGERP------KDEDSVKLPPKAF--- 151
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907068048  713 ssKELDESSVFVLGAVLYKNLDLILPTLRNY-----------TVVNSKVIVVTIRP 757
Cdd:pfam16489  152 --KPPDSNGTVVVVFILYRNLGSLLPPSSRYdpdrrslrlprRVVNSPVVSASVHS 205
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
311-361 3.37e-16

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


:

Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 73.78  E-value: 3.37e-16
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 1907068048   311 WEEWSPWSLCSFTCGRGQRTRTRSCT--PPQYGGRPCEGPETHHKPCNIALCP 361
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCCspPPQNGGGPCTGEDVETRACNEQPCP 53
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
779-830 7.21e-15

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


:

Pssm-ID: 197639  Cd Length: 49  Bit Score: 70.11  E-value: 7.21e-15
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|..
gi 1907068048   779 NPYCVLWDdsksnESLGTWSTQGCKTVLTDASHTKCLCDRLSTFAILAQQPR 830
Cdd:smart00303    2 NPICVFWD-----ESSGEWSTRGCELLETNGTHTTCSCNHLTTFAVLMDVPP 48
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
366-415 5.50e-14

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


:

Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 67.61  E-value: 5.50e-14
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|..
gi 1907068048   366 WQEWSSWSHCSVTCSNGTQQRSRQCT--AAAHGGSECRGPWAESRECYNPEC 415
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCCspPPQNGGGPCTGEDVETRACNEQPC 52
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
259-306 8.44e-14

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


:

Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 67.23  E-value: 8.44e-14
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|..
gi 1907068048   259 EWSQWSACSVTCGQGSQVRTRTCVSPY----GTHCSGPLRESRVCnNTALCP 306
Cdd:smart00209    3 EWSEWSPCSVTCGGGVQTRTRSCCSPPpqngGGPCTGEDVETRAC-NEQPCP 53
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
421-471 1.57e-11

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


:

Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 60.68  E-value: 1.57e-11
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 1907068048   421 WNQWGHWSGCSKSCDGGWERRMRTCQGAAVT--GQQCEGTGEEVRRCSEQRCP 471
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQngGGPCTGEDVETRACNEQPCP 53
HormR smart00008
Domain present in hormone receptors;
473-539 6.91e-11

Domain present in hormone receptors;


:

Pssm-ID: 214468  Cd Length: 70  Bit Score: 59.45  E-value: 6.91e-11
                            10        20        30        40        50        60        70
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907068048   473 PYEICPEDYLISMVWKRTPAGDLAFNQCPLNATG-----TTSRRCSLSLhgvaSWEQ--PSFARCISNEYRHLQ 539
Cdd:smart00008    1 TDLGCPATWDGIICWPQTPAGQLVEVPCPKYFSGfsyktGASRNCTENG----GWSPpfPNYSNCTSNDYEELK 70
 
Name Accession Description Interval E-value
7tmB2_BAI3 cd15989
brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 ...
835-1127 0e+00

brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320655 [Multi-domain]  Cd Length: 293  Bit Score: 569.32  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  835 ESSGTPSVTLIVGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFF 914
Cdd:cd15989      1 ESSGTPSVTLIVGCGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKGICTMTTAFLHFF 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  915 FLASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGGLLYAFVGPAAA 994
Cdd:cd15989     81 FLASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVAISMGFTKAKGYGTPHYCWLSLEGGLLYAFVGPAAA 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  995 VVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCGVVSTTALSATTASNAMASLWSSCVVLPLLAL 1074
Cdd:cd15989    161 VVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCGVVSTTALSATTASNAMASLWSSCVVLPLLAL 240
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1907068048 1075 TWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRN 1127
Cdd:cd15989    241 TWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRN 293
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
839-1106 1.25e-71

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 239.87  E-value: 1.25e-71
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  839 TPSVTLIVGSGLSCLALITLAVVYAALwRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSI--------CTTTTAF 910
Cdd:pfam00002    3 SLKVIYTVGYSLSLVALLLAIAIFLLF-RKLHCTRNYIHLNLFASFILRALLFLVGDAVLFNKQDldhcswvgCKVVAVF 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  911 LHFFFLASFCWVLTEAWQSYMA-VTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTrTKGYGTDHYCWLSLEGGLLYAFV 989
Cdd:pfam00002   82 LHYFFLANFFWMLVEGLYLYTLlVEVFFSERKYFWWYLLIGWGVPALVVGIWAGVD-PKGYGEDDGCWLSNENGLWWIIR 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  990 GPAAAVVLVNMVIGILVFNKLVSRDGILDKKLKHRAgqmsephsgltlkcakcgvvsttalsattasNAMASLWSSCVVL 1069
Cdd:pfam00002  161 GPILLIILVNFIIFINIVRILVQKLRETNMGKSDLK-------------------------------QYRRLAKSTLLLL 209
                          250       260       270
                   ....*....|....*....|....*....|....*....
gi 1907068048 1070 PLLALTWMSAVLAMTDKR--SILFQILFAVFDSLQGFVI 1106
Cdd:pfam00002  210 PLLGITWVFGLFAFNPENtlRVVFLYLFLILNSFQGFFV 248
AGRB_N pfam19188
Adhesion GPCR B N-terminal region; This region is found at the N-terminus of various adhesion ...
30-201 1.21e-63

Adhesion GPCR B N-terminal region; This region is found at the N-terminus of various adhesion G-protein coupled receptor B proteins. This region contains 10 cysteine residues that probably form disulphide bonds.


Pssm-ID: 465991  Cd Length: 177  Bit Score: 214.26  E-value: 1.21e-63
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048   30 CSTLVKGVIYGSYSVSEMFPKNFTNCTWTLENPDPTKYSIYLKFSKKDLSCSNFSLLAYQFDHFSHEKIKDLLRKNH--S 107
Cdd:pfam19188    3 CSTLVQGVLYGSFSLRDLFPTNASGCSWTLENPDPTKYTLYLKFTKPTQSCLPFSPRLLQFDHYLENTTRTYLGRESfdE 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  108 IMQLCSSKNAFVFLQYDKNFIQIRRVFPTDFPGLQKKVEEDQKSFFEFLVLNKVSPSQFGCHVLCTWLESCLKSENGrTE 187
Cdd:pfam19188   83 VVELCDASSPFSFLEFDKNFVQLCLLAEPRGDPESVVPGPSGDFKVEVLVINNENPSQFTCGVLCRWLEECLSASTS-SR 161
                          170
                   ....*....|....
gi 1907068048  188 SCGIMYTKCTCPQH 201
Cdd:pfam19188  162 PCGIMQTPCICPGT 175
GAIN pfam16489
GPCR-Autoproteolysis INducing (GAIN) domain; The GAIN a domain of alpha-helices and ...
557-757 6.12e-46

GPCR-Autoproteolysis INducing (GAIN) domain; The GAIN a domain of alpha-helices and beta-strands that is found in cell-adhesion GPCRs and precedes the GPS motif where the autoproteolysis occurs, family, pfam01825. The full GAIN domain, comprises the GPS and the GAIN, in cell-adhesion GPCRs, and is the functional unit for autoproteolysis. The GPS motif at the end of the GAIN domain is an ancient domain that exists in primitive ancestor organizms, and the full GAIN + GPS is conserved in all cell-adhesion GPCRs and all PKD1-related proteins.


Pssm-ID: 465137  Cd Length: 205  Bit Score: 164.36  E-value: 6.12e-46
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  557 GMSQVTKTLLDLTQRKNFYAGDLLVSVEILRNVTDTFKRASYIPASDGVQNFFQIVSNLLDEENKEKWEDAQQIYPGSIE 636
Cdd:pfam16489    1 GAKELARELRNATRHGPLYGGDVLTAVELLSQLFDLLATQDATLSNAFLENFVQTVSNLLDPENRESWEDLQQTERGTAA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  637 --LMQVIEDFIHIVGMGMMDFQNSYLMTGNVVASIQKL--PAASVLTDINFPMKGRKGmvdwarNSEDRVVIPKSIFtpv 712
Cdd:pfam16489   81 tkLLRTLEEYALLLAQNMKYLTPFTIVTPNIVLSVDRLdtHNFKGARFPRFPMKGERP------KDEDSVKLPPKAF--- 151
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907068048  713 ssKELDESSVFVLGAVLYKNLDLILPTLRNY-----------TVVNSKVIVVTIRP 757
Cdd:pfam16489  152 --KPPDSNGTVVVVFILYRNLGSLLPPSSRYdpdrrslrlprRVVNSPVVSASVHS 205
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
311-361 3.37e-16

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 73.78  E-value: 3.37e-16
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 1907068048   311 WEEWSPWSLCSFTCGRGQRTRTRSCT--PPQYGGRPCEGPETHHKPCNIALCP 361
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCCspPPQNGGGPCTGEDVETRACNEQPCP 53
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
779-830 7.21e-15

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


Pssm-ID: 197639  Cd Length: 49  Bit Score: 70.11  E-value: 7.21e-15
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|..
gi 1907068048   779 NPYCVLWDdsksnESLGTWSTQGCKTVLTDASHTKCLCDRLSTFAILAQQPR 830
Cdd:smart00303    2 NPICVFWD-----ESSGEWSTRGCELLETNGTHTTCSCNHLTTFAVLMDVPP 48
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
366-415 5.50e-14

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 67.61  E-value: 5.50e-14
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|..
gi 1907068048   366 WQEWSSWSHCSVTCSNGTQQRSRQCT--AAAHGGSECRGPWAESRECYNPEC 415
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCCspPPQNGGGPCTGEDVETRACNEQPC 52
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
259-306 8.44e-14

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 67.23  E-value: 8.44e-14
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|..
gi 1907068048   259 EWSQWSACSVTCGQGSQVRTRTCVSPY----GTHCSGPLRESRVCnNTALCP 306
Cdd:smart00209    3 EWSEWSPCSVTCGGGVQTRTRSCCSPPpqngGGPCTGEDVETRAC-NEQPCP 53
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
780-825 1.76e-13

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


Pssm-ID: 460350  Cd Length: 44  Bit Score: 65.79  E-value: 1.76e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 1907068048  780 PYCVLWDDSksNESLGTWSTQGCKTVLTDASHTKCLCDRLSTFAIL 825
Cdd:pfam01825    1 PQCVFWDFT--NSTTGRWSTEGCTTVSLNDTHTVCSCNHLTSFAVL 44
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
313-360 4.81e-13

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 64.99  E-value: 4.81e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 1907068048  313 EWSPWSLCSFTCGRGQRTRTRS-CTPPQYGGRPCeGPETHHKPCNIALC 360
Cdd:pfam19028    5 EWSEWSECSVTCGGGVQTRTRTvIVEPQNGGRPC-PELLERRPCNLPPC 52
TSP_1 pfam00090
Thrombospondin type 1 domain;
259-300 8.60e-13

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 63.98  E-value: 8.60e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 1907068048  259 EWSQWSACSVTCGQGSQVRTRTCVS--PYGTHCSGPLRESRVCN 300
Cdd:pfam00090    2 PWSPWSPCSVTCGKGIQVRQRTCKSpfPGGEPCTGDDIETQACK 45
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
421-471 1.57e-11

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 60.68  E-value: 1.57e-11
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 1907068048   421 WNQWGHWSGCSKSCDGGWERRMRTCQGAAVT--GQQCEGTGEEVRRCSEQRCP 471
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQngGGPCTGEDVETRACNEQPCP 53
TSP_1 pfam00090
Thrombospondin type 1 domain;
367-415 6.59e-11

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 58.58  E-value: 6.59e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 1907068048  367 QEWSSWSHCSVTCSNGTQQRSRQCTAAAHGGSECRGPWAESRECYNPEC 415
Cdd:pfam00090    1 SPWSPWSPCSVTCGKGIQVRQRTCKSPFPGGEPCTGDDIETQACKMDKC 49
HormR smart00008
Domain present in hormone receptors;
473-539 6.91e-11

Domain present in hormone receptors;


Pssm-ID: 214468  Cd Length: 70  Bit Score: 59.45  E-value: 6.91e-11
                            10        20        30        40        50        60        70
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907068048   473 PYEICPEDYLISMVWKRTPAGDLAFNQCPLNATG-----TTSRRCSLSLhgvaSWEQ--PSFARCISNEYRHLQ 539
Cdd:smart00008    1 TDLGCPATWDGIICWPQTPAGQLVEVPCPKYFSGfsyktGASRNCTENG----GWSPpfPNYSNCTSNDYEELK 70
TSP_1 pfam00090
Thrombospondin type 1 domain;
424-470 1.04e-06

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 47.03  E-value: 1.04e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1907068048  424 WGHWSGCSKSCDGGWERRMRTCQGAAVTGQQCEGTGEEVRRCSEQRC 470
Cdd:pfam00090    3 WSPWSPCSVTCGKGIQVRQRTCKSPFPGGEPCTGDDIETQACKMDKC 49
HRM pfam02793
Hormone receptor domain; This extracellular domain contains four conserved cysteines that ...
474-533 2.69e-05

Hormone receptor domain; This extracellular domain contains four conserved cysteines that probably for disulphide bridges. The domain is found in a variety of hormone receptors. It may be a ligand binding domain.


Pssm-ID: 397086  Cd Length: 64  Bit Score: 43.13  E-value: 2.69e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907068048  474 YEICPEDYLISMVWKRTPAGDLAFNQCP-----LNATGTTSRRCslSLHGvaSWEQPS---FARCISN 533
Cdd:pfam02793    1 GLGCPRTWDGILCWPRTPAGETVEVPCPdyfsgFDPRGNASRNC--TEDG--TWSEHPpsnYSNCTSN 64
PTZ00087 PTZ00087
thrombosponding-related protein; Provisional
259-299 1.28e-04

thrombosponding-related protein; Provisional


Pssm-ID: 185438  Cd Length: 340  Bit Score: 46.09  E-value: 1.28e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 1907068048  259 EWSQWSACSVTCGQ--GSQVRTRTCVSPYGTHCSGPLRESRVC 299
Cdd:PTZ00087   235 EWGEWSNCSMECDHpdNVQIRERKCAHPSGDCFKGDLKETRPC 277
PTZ00441 PTZ00441
sporozoite surface protein 2 (SSP2); Provisional
296-363 1.32e-04

sporozoite surface protein 2 (SSP2); Provisional


Pssm-ID: 240420 [Multi-domain]  Cd Length: 576  Bit Score: 46.50  E-value: 1.32e-04
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907068048  296 SRVC---NNTALCpvhGVWEEWSPwslCSFTCGRGQRTRTRSCTPpqyggrpcEGPETH-HKPCNIALCPVD 363
Cdd:PTZ00441   228 AKVCtevERTASC---GPWDEWTP---CSVTCGKGTHSRSRPILH--------EGCTTHmVEECEEEECPVE 285
PTZ00087 PTZ00087
thrombosponding-related protein; Provisional
366-413 8.33e-03

thrombosponding-related protein; Provisional


Pssm-ID: 185438  Cd Length: 340  Bit Score: 40.31  E-value: 8.33e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1907068048  366 WQEWSSWSHCSVTCS--NGTQQRSRQCtaaAHGGSEC-RGPWAESRECYNP 413
Cdd:PTZ00087   233 YTEWGEWSNCSMECDhpDNVQIRERKC---AHPSGDCfKGDLKETRPCQVP 280
 
Name Accession Description Interval E-value
7tmB2_BAI3 cd15989
brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 ...
835-1127 0e+00

brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320655 [Multi-domain]  Cd Length: 293  Bit Score: 569.32  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  835 ESSGTPSVTLIVGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFF 914
Cdd:cd15989      1 ESSGTPSVTLIVGCGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKGICTMTTAFLHFF 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  915 FLASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGGLLYAFVGPAAA 994
Cdd:cd15989     81 FLASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVAISMGFTKAKGYGTPHYCWLSLEGGLLYAFVGPAAA 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  995 VVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCGVVSTTALSATTASNAMASLWSSCVVLPLLAL 1074
Cdd:cd15989    161 VVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCGVVSTTALSATTASNAMASLWSSCVVLPLLAL 240
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1907068048 1075 TWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRN 1127
Cdd:cd15989    241 TWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRN 293
7tmB2_BAI2 cd15988
brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 ...
837-1125 1.05e-171

brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320654 [Multi-domain]  Cd Length: 291  Bit Score: 515.27  E-value: 1.05e-171
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  837 SGTPSVTLIVGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFL 916
Cdd:cd15988      1 TGSPSVPLMIGCAVSCMALLILLAIYAAFWRFIRSERSIILLNFCLSILASNILILVGQSQTLSKGVCTMTAAFLHFFFL 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  917 ASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGGLLYAFVGPAAAVV 996
Cdd:cd15988     81 SSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKGYGTASYCWLSLEGGLLYAFVGPAAVIV 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  997 LVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCGVVSTTALSATTASNAMASLWSSCVVLPLLALTW 1076
Cdd:cd15988    161 LVNMLIGIIVFNKLMSRDGISDKSKKQRAGSEAEPCSSLLLKCSKCGVVSSAAMSSATASSAMASLWSSCVVLPLLALTW 240
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*....
gi 1907068048 1077 MSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRL 1125
Cdd:cd15988    241 MSAVLAMTDRRSILFQVLFAVFNSVQGFVIITVHCFLRREVQDVVKCQM 289
7tmB2_BAI_Adhesion_VII cd15251
brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 ...
837-1127 7.89e-171

brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediate direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320379  Cd Length: 253  Bit Score: 511.41  E-value: 7.89e-171
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  837 SGTPSVTLIVGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFL 916
Cdd:cd15251      1 AGSPSVTLIVGCGVSCLALLTLLAIYAAFWRYIRSERSIILINFCLSIISSNILILVGQTQTLNKGVCTMTAAFLHFFFL 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  917 ASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGGLLYAFVGPAAAVV 996
Cdd:cd15251     81 SSFCWVLTEAWQSYMAVTGRMRTRLIRKRFLCLGWGLPALVVAVSVGFTRTKGYGTSSYCWLSLEGGLLYAFVGPAAAVV 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  997 LVNMVIGILVFNKLVSRDGILDkklkhragqmsephsgltlkcakcgvvsttalsattasNAMASLWSSCVVLPLLALTW 1076
Cdd:cd15251    161 LVNMVIGILVFNKLVSRDGISD--------------------------------------NAMASLWSSCVVLPLLALTW 202
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1907068048 1077 MSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRN 1127
Cdd:cd15251    203 MSAVLAMTDRRSVLFQILFAVFDSLQGFVIVMVHCILRREVQDAVKCRMGV 253
7tmB2_BAI1 cd15990
brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 ...
834-1133 4.14e-132

brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320656  Cd Length: 267  Bit Score: 408.99  E-value: 4.14e-132
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  834 MESSGTPSVTLIVGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHF 913
Cdd:cd15990      1 MEKALLPSVTLIVGCGVSSLTLLLLIIIYVSVWRYIRSERSVILINFCLSIISSNALILIGQTQTRNKVVCTLVAAFLHF 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  914 FFLASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGGLLYAFVGPAA 993
Cdd:cd15990     81 FFLSSFCWVLTEAWQSYMAVTGRLRNRIIRKRFLCLGWGLPALVVAISVGFTKAKGYGTVNYCWLSLEGGLLYAFVGPAA 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  994 AVVLVNMVIGILVFNKLVSRDGILDKKLKHRAGqmsephsgltlkcakcgvvsttalsattasnamASLWSSCVVLPLLA 1073
Cdd:cd15990    161 AVVLVNMVIGILVFNKLVSKDGITDKKLKERAG---------------------------------ASLWSSCVVLPLLA 207
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1074 LTWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRNCQDPIN 1133
Cdd:cd15990    208 LTWMSAVLAITDRRSALFQILFAVFDSLEGFVIVMVHCILRREVQDAVKCRVVDRQEEGN 267
7tmB2_Adhesion cd15040
adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G ...
841-1121 8.23e-78

adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G protein-coupled receptors; The B2 subfamily of class B GPCRs consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320168 [Multi-domain]  Cd Length: 253  Bit Score: 257.89  E-value: 8.23e-78
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  841 SVTLIVGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFC 920
Cdd:cd15040      5 SIITYIGCGLSLLGLLLTIITYILFRKLRKRKPTKILLNLCLALLLANLLFLFGINSTDNPVLCTAVAALLHYFLLASFM 84
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  921 WVLTEAWQSYMAVTG--KIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLV 998
Cdd:cd15040     85 WMLVEALLLYLRLVKvfGTYPRHFILKYALIGWGLPLIIVIITLAVDPDSYGNSSGYCWLSNGNGLYYAFLGPVLLIILV 164
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  999 NMVIGILVFNKLVSRDGILDKKLKhragqmsephsgltlkcakcgvvsttalsattaSNAMASLWSSCVVLPLLALTWMS 1078
Cdd:cd15040    165 NLVIFVLVLRKLLRLSAKRNKKKR---------------------------------KKTKAQLRAAVSLFFLLGLTWIF 211
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|...
gi 1907068048 1079 AVLAMTDKRSIlFQILFAVFDSLQGFVIVMVHCILRREVQDAF 1121
Cdd:cd15040    212 GILAIFGARVV-FQYLFAIFNSLQGFFIFIFHCLRNKEVRKAW 253
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
839-1106 1.25e-71

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 239.87  E-value: 1.25e-71
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  839 TPSVTLIVGSGLSCLALITLAVVYAALwRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSI--------CTTTTAF 910
Cdd:pfam00002    3 SLKVIYTVGYSLSLVALLLAIAIFLLF-RKLHCTRNYIHLNLFASFILRALLFLVGDAVLFNKQDldhcswvgCKVVAVF 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  911 LHFFFLASFCWVLTEAWQSYMA-VTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTrTKGYGTDHYCWLSLEGGLLYAFV 989
Cdd:pfam00002   82 LHYFFLANFFWMLVEGLYLYTLlVEVFFSERKYFWWYLLIGWGVPALVVGIWAGVD-PKGYGEDDGCWLSNENGLWWIIR 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  990 GPAAAVVLVNMVIGILVFNKLVSRDGILDKKLKHRAgqmsephsgltlkcakcgvvsttalsattasNAMASLWSSCVVL 1069
Cdd:pfam00002  161 GPILLIILVNFIIFINIVRILVQKLRETNMGKSDLK-------------------------------QYRRLAKSTLLLL 209
                          250       260       270
                   ....*....|....*....|....*....|....*....
gi 1907068048 1070 PLLALTWMSAVLAMTDKR--SILFQILFAVFDSLQGFVI 1106
Cdd:pfam00002  210 PLLGITWVFGLFAFNPENtlRVVFLYLFLILNSFQGFFV 248
AGRB_N pfam19188
Adhesion GPCR B N-terminal region; This region is found at the N-terminus of various adhesion ...
30-201 1.21e-63

Adhesion GPCR B N-terminal region; This region is found at the N-terminus of various adhesion G-protein coupled receptor B proteins. This region contains 10 cysteine residues that probably form disulphide bonds.


Pssm-ID: 465991  Cd Length: 177  Bit Score: 214.26  E-value: 1.21e-63
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048   30 CSTLVKGVIYGSYSVSEMFPKNFTNCTWTLENPDPTKYSIYLKFSKKDLSCSNFSLLAYQFDHFSHEKIKDLLRKNH--S 107
Cdd:pfam19188    3 CSTLVQGVLYGSFSLRDLFPTNASGCSWTLENPDPTKYTLYLKFTKPTQSCLPFSPRLLQFDHYLENTTRTYLGRESfdE 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  108 IMQLCSSKNAFVFLQYDKNFIQIRRVFPTDFPGLQKKVEEDQKSFFEFLVLNKVSPSQFGCHVLCTWLESCLKSENGrTE 187
Cdd:pfam19188   83 VVELCDASSPFSFLEFDKNFVQLCLLAEPRGDPESVVPGPSGDFKVEVLVINNENPSQFTCGVLCRWLEECLSASTS-SR 161
                          170
                   ....*....|....
gi 1907068048  188 SCGIMYTKCTCPQH 201
Cdd:pfam19188  162 PCGIMQTPCICPGT 175
7tmB2_GPR133-like_Adhesion_V cd15933
orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of ...
845-1121 5.32e-57

orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group V adhesion GPCRs include orphan receptors GPR133, GPR144, and closely related proteins. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the G(s) protein, leading to activation of adenylate cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320599 [Multi-domain]  Cd Length: 252  Bit Score: 197.94  E-value: 5.32e-57
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  845 IVGSGLSCLALITLAVVYAALwRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLT 924
Cdd:cd15933      9 YIGCGISIACLALTLIIFLVL-RVLSSDRFQIHKNLCVALLLAQILLLAGEWAEGNKVACKVVAILLHFFFMAAFSWMLV 87
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  925 EAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFtRTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVIGI 1004
Cdd:cd15933     88 EGLHLYLMIVKVFNYKSKMRYYYFIGWGLPAIIVAISLAI-LFDDYGSPNVCWLSLDDGLIWAFVGPVIFIITVNTVILI 166
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1005 LVFNKLVSRDGILDKKLKHRAGQMSephsgltlkcakcgvvsttalsatTASNAMAslwsscVVLPLLALTWMSAVLAMT 1084
Cdd:cd15933    167 LVVKITVSLSTNDAKKSQGTLAQIK------------------------STAKASV------VLLPILGLTWLFGVLVVN 216
                          250       260       270
                   ....*....|....*....|....*....|....*..
gi 1907068048 1085 DKrSILFQILFAVFDSLQGFVIVMVHCILRREVQDAF 1121
Cdd:cd15933    217 SQ-TIVFQYIFVILNSLQGLMIFLFHCVLNSEVRSAF 252
7tm_classB cd13952
class B family of seven-transmembrane G protein-coupled receptors; The class B of ...
845-1121 6.57e-57

class B family of seven-transmembrane G protein-coupled receptors; The class B of seven-transmembrane GPCRs is classified into three major subfamilies: subfamily B1 (secretin-like receptor family), B2 (adhesion family), and B3 (Methuselah-like family). The class B receptors have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi or prokaryotes. The B1 subfamily comprises receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the subfamily B1 receptors preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The subfamily B2 consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Furthermore, the subfamily B3 includes Methuselah (Mth) protein, which was originally identified in Drosophila as a GPCR affecting stress resistance and aging, and its closely related proteins.


Pssm-ID: 410627 [Multi-domain]  Cd Length: 260  Bit Score: 198.20  E-value: 6.57e-57
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  845 IVGSGLSCLALITLAVVYAALWRYiRSERSIILINFCLSIISSNILILVGQTQTHNKS--ICTTTTAFLHFFFLASFCWV 922
Cdd:cd13952      9 YIGCSLSLVGLLLTIITYLLFPKL-RNLRGKILINLCLSLLLAQLLFLIGQLLTSSDRpvLCKALAILLHYFLLASFFWM 87
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  923 LTEAWQSYMAVTGKIRTRlIRKRFL---CLGWGLPALVVATSVGFTRT----KGYGTDHYCWLSLEGGLLYAFVGPAAAV 995
Cdd:cd13952     88 LVEAFDLYRTFVKVFGSS-ERRRFLkysLYGWGLPLLIVIITAIVDFSlygpSPGYGGEYCWLSNGNALLWAFYGPVLLI 166
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  996 VLVNMVIGILVFNKLVSRDGILDKKLKHRagqmsephsgltlkcakcgvvsttalsattasNAMASLWSSCVVLPLLALT 1075
Cdd:cd13952    167 LLVNLVFFILTVRILLRKLRETPKQSERK--------------------------------SDRKQLRAYLKLFPLMGLT 214
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*.
gi 1907068048 1076 WMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAF 1121
Cdd:cd13952    215 WIFGILAPFVGGSLVFWYLFDILNSLQGFFIFLIFCLKNKEVRRLL 260
GAIN pfam16489
GPCR-Autoproteolysis INducing (GAIN) domain; The GAIN a domain of alpha-helices and ...
557-757 6.12e-46

GPCR-Autoproteolysis INducing (GAIN) domain; The GAIN a domain of alpha-helices and beta-strands that is found in cell-adhesion GPCRs and precedes the GPS motif where the autoproteolysis occurs, family, pfam01825. The full GAIN domain, comprises the GPS and the GAIN, in cell-adhesion GPCRs, and is the functional unit for autoproteolysis. The GPS motif at the end of the GAIN domain is an ancient domain that exists in primitive ancestor organizms, and the full GAIN + GPS is conserved in all cell-adhesion GPCRs and all PKD1-related proteins.


Pssm-ID: 465137  Cd Length: 205  Bit Score: 164.36  E-value: 6.12e-46
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  557 GMSQVTKTLLDLTQRKNFYAGDLLVSVEILRNVTDTFKRASYIPASDGVQNFFQIVSNLLDEENKEKWEDAQQIYPGSIE 636
Cdd:pfam16489    1 GAKELARELRNATRHGPLYGGDVLTAVELLSQLFDLLATQDATLSNAFLENFVQTVSNLLDPENRESWEDLQQTERGTAA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  637 --LMQVIEDFIHIVGMGMMDFQNSYLMTGNVVASIQKL--PAASVLTDINFPMKGRKGmvdwarNSEDRVVIPKSIFtpv 712
Cdd:pfam16489   81 tkLLRTLEEYALLLAQNMKYLTPFTIVTPNIVLSVDRLdtHNFKGARFPRFPMKGERP------KDEDSVKLPPKAF--- 151
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907068048  713 ssKELDESSVFVLGAVLYKNLDLILPTLRNY-----------TVVNSKVIVVTIRP 757
Cdd:pfam16489  152 --KPPDSNGTVVVVFILYRNLGSLLPPSSRYdpdrrslrlprRVVNSPVVSASVHS 205
7tmB2_latrophilin-like_invertebrate cd15440
invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane ...
846-1118 1.01e-42

invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; This subgroup includes latrophilin-like proteins that are found in invertebrates such as insects and worms. Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of vertebrate latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320556 [Multi-domain]  Cd Length: 259  Bit Score: 157.04  E-value: 1.01e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALItLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTE 925
Cdd:cd15440     10 IGCIISIVCLL-LAFITFTCFRNLQCDRNTIHKNLCLCLLIAEIVFLLGIDQTENRTLCGVIAGLLHYFFLAAFSWMLLE 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  926 AWQSYM---AVTGKIRTRliRKRFLCLGWGLPALVVATSVGFTRTkGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVi 1002
Cdd:cd15440     89 GFQLYVmlvEVFEPEKSR--IKWYYLFGYGLPALIVAVSAGVDPT-GYGTEDHCWLSTENGFIWSFVGPVIVVLLANLV- 164
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1003 gILVFNKLVSrdgildkkLKHRagqmsephsgltlkcakcgvvSTTALSATTASNAMASLW--SSCVVLPLLALTWMSAV 1080
Cdd:cd15440    165 -FLGMAIYVM--------CRHS---------------------SRSASKKDASKLKNIRGWlkGSIVLVVLLGLTWTFGL 214
                          250       260       270
                   ....*....|....*....|....*....|....*...
gi 1907068048 1081 LAMtDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQ 1118
Cdd:cd15440    215 LFI-NQESIVMAYIFTILNSLQGLFIFIFHCVLNEKVR 251
7tmB2_EMR cd15439
epidermal growth factor-like module-containing mucin-like hormone receptors, member of the ...
840-1122 6.02e-42

epidermal growth factor-like module-containing mucin-like hormone receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4) and the leukocyte cell-surface antigen CD97, are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying number of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of EMR2, alternative splicing results in four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320555 [Multi-domain]  Cd Length: 263  Bit Score: 155.19  E-value: 6.02e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  840 PSVTLI--VGSGLSCLALItLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLA 917
Cdd:cd15439      2 LALTVItyVGLIISLLCLF-LAILTFLLCRSIRNTSTSLHLQLSLCLFLADLLFLVGIDRTDNKVLCSIIAGFLHYLFLA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  918 SFCWVLTEAWQSYMAV-----TGKIRTRLIRKRFLCL-GWGLPALVVATSVGfTRTKGYGTDHYCWLSLEGGLLYAFVGP 991
Cdd:cd15439     81 CFAWMFLEAVHLFLTVrnlkvVNYFSSHRFKKRFMYPvGYGLPAVIVAISAA-VNPQGYGTPKHCWLSMEKGFIWSFLGP 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  992 AAAVVLVNMVIGILVFNKLVSRDGILDKKlkhragqmsephsgltlkcakcgvVSTTALSATTASNAMASLWsscvvlpL 1071
Cdd:cd15439    160 VCVIIVINLVLFCLTLWILREKLSSLNAE------------------------VSTLKNTRLLTFKAIAQLF-------I 208
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1907068048 1072 LALTWMSAVLaMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15439    209 LGCTWILGLF-QVGPVATVMAYLFTITNSLQGVFIFLVHCLLNRQVREEYR 258
7tmB2_CELSR_Adhesion_IV cd15441
cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 ...
837-1126 9.57e-42

cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuron migration and axon guidance in the CNS.


Pssm-ID: 320557 [Multi-domain]  Cd Length: 254  Bit Score: 154.33  E-value: 9.57e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  837 SGTPSVTLIVGSGLScLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFL 916
Cdd:cd15441      1 VLLLKIVTYIGIGIS-LVLLVIAFLVLSCLRGLQSNSNSIHKNLVACLLLAELLFLLGINQTENLFPCKLIAILLHYFYL 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  917 ASFCWVLTEAWQSYMAVTgkiRTRLIRK---RF-LCLGWGLPALVVATSVGFtRTKGYGTDHYCWLSLEGGLLYAFVGPA 992
Cdd:cd15441     80 SAFSWLLVESLHLYRMLT---EPRDINHghmRFyYLLGYGIPAIIVGLSVGL-RPDGYGNPDFCWLSVNETLIWSFAGPI 155
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  993 AAVVLVNMVIGILVFnklvsrdgildkklkhragqmsepHSGLTLKCAKCGVVSTTALsattasnamasLWSSCVVLPLL 1072
Cdd:cd15441    156 AFVIVITLIIFILAL------------------------RASCTLKRHVLEKASVRTD-----------LRSSFLLLPLL 200
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1907068048 1073 ALTWMSAVLAMTDKrSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLR 1126
Cdd:cd15441    201 GATWVFGLLAVNED-SELLHYLFAGLNFLQGLFIFLFYCIFNKKVRRELKNALL 253
7tmB2_CD97 cd15438
CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
842-1122 6.46e-41

CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320554 [Multi-domain]  Cd Length: 261  Bit Score: 152.22  E-value: 6.46e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  842 VTLIVGSGLS-CLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFC 920
Cdd:cd15438      4 LTLITKVGLSvSLFCLFLCILTFLFCRSIRGTRNTIHLHLCLSLFLAHLIFLLGINNTNNQVACAVVAGLLHYFFLAAFC 83
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  921 WVLTEAWQSYMAVTGKIRTRLIRKRFLCL-GWGLPALVVATSVGFTrTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVN 999
Cdd:cd15438     84 WMSLEGVELYLMVVQVFNTQSLKKRYLLLiGYGVPLVIVAISAAVN-SKGYGTQRHCWLSLERGFLWSFLGPVCLIILVN 162
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1000 MVIGILVFNKLVSRDGILDKKLKhragqmsephsgltlKCAKCGVVSTTALSAttasnamaslwsscvvLPLLALTWMSA 1079
Cdd:cd15438    163 AIIFVITVWKLAEKFSSINPDME---------------KLRKIRALTITAIAQ----------------LCILGCTWIFG 211
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|...
gi 1907068048 1080 VLAMTDkRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15438    212 FFQFSD-STLVMSYLFTILNSLQGLFIFLLHCLLSKQVREEYS 253
7tmB2_Latrophilin_Adhesion_I cd15252
Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of ...
846-1126 3.41e-39

Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; Group I adhesion GPCRs consist of latrophilins (also called lectomedins or latrotoxin receptors) and ETL (EGF-TM7-latrophilin-related protein. These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320380 [Multi-domain]  Cd Length: 257  Bit Score: 146.88  E-value: 3.41e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALItLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTE 925
Cdd:cd15252     10 VGIIISLVCLA-ICIFTFWFFRGLQSDRTTIHKNLCISLFLAELVFLIGINTTTNKIFCSVIAGLLHYFFLAAFAWMFIE 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  926 AWQSYMAVTGKIRTR-LIRKRFLCLGWGLPALVVATSVGFTrTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMV-IG 1003
Cdd:cd15252     89 GIQLYLMLVEVFENEgSRHKNFYIFGYGSPAVIVGVSAALG-YRYYGTTKVCWLSTENYFIWSFIGPATLIILLNLIfLG 167
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1004 ILVFnklvsrdgildKKLKHRAGQMSEpHSGLtlkcakcgvvsttalsattaSNAMASLWSSCVVLPLLALTWMSAVLAM 1083
Cdd:cd15252    168 VAIY-----------KMFRHTAGLKPE-VSCL--------------------ENIRSWARGAIALLFLLGLTWIFGVLHI 215
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|...
gi 1907068048 1084 tDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLR 1126
Cdd:cd15252    216 -NHASVVMAYLFTVSNSLQGMFIFLFHCVLSRKVRKEYYKLFR 257
7tmB2_GPR133 cd15256
orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G ...
846-1122 1.52e-36

orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR133 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR144. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320384 [Multi-domain]  Cd Length: 260  Bit Score: 139.29  E-value: 1.52e-36
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALITLAVVYAALWRY--IRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVL 923
Cdd:cd15256     10 VGCSLSIFCLAITLVTFAVLSSVstIRNQRYHIHANLSFAVLVAQILLLISFRFEPGTLPCKIMAILLHFFFLSAFAWML 89
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  924 TEAWQSYMAVTGKIRTRLIRKRFLC-LGWGLPALVVATSVGFTrTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNmvI 1002
Cdd:cd15256     90 VEGLHLYSMVIKVFGSEESKHFYYYgIGWGSPLLICIISLTSA-LDSYGESDNCWLSLENGAIWAFVAPALFVIVVN--I 166
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1003 GILV-FNKLVSRDGILDKKLKhragqmsephsgltlkcakcGVVSTTALSATTASnamaslwsscVVLPLLALTWMSAVL 1081
Cdd:cd15256    167 GILIaVTRVISRISADNYKVH--------------------GDANAFKLTAKAVA----------VLLPILGSSWVFGVL 216
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|.
gi 1907068048 1082 AMtDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15256    217 AV-NTHALVFQYMFAIFNSLQGFFIFLFHCLLNSEVRAAFK 256
7tmB2_ETL cd15437
Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; ...
853-1125 2.99e-33

Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; member of the class B2 family of seven-transmembrane G protein-coupled receptors; ETL (EGF-TM7-latrophilin-related protein) belongs to Group I adhesion GPCRs, which also include latrophilins (also called lectomedins or latrotoxin receptors). All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. ETL, for instance, contains EGF-like repeats, which also present in other EGF-TM7 adhesion GPCRs, such as Cadherin EGF LAG seven-pass G-type receptors (CELSR1-3), EGF-like module receptors (EMR1-3), CD97, and Flamingo. ETL is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320553 [Multi-domain]  Cd Length: 258  Bit Score: 130.00  E-value: 2.99e-33
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  853 LALITLAVVYAALW--RYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTEAWQSY 930
Cdd:cd15437     14 ISLICLSMCIFTFWffSEIQSTRTTIHKNLCCSLFLAELIFLIGINMNANKLFCSIIAGLLHYFFLAAFAWMCIEGIHLY 93
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  931 MAVTGKIRTR-LIRKRFLCLGWGLPALVVATSVGFTrTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVN-MVIGILVFn 1008
Cdd:cd15437     94 LIVVGVIYNKgFLHKNFYIFGYGSPAVVVGISAALG-YKYYGTTKVCWLSTENNFIWSFIGPACLIILVNlLAFGVIIY- 171
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1009 klvsrdgildKKLKHRAGQMSEphsgltlkcakcgvVSTTALSATTASNAMASLWsscvvlpLLALTWMSAVLAMTDKrS 1088
Cdd:cd15437    172 ----------KVFRHTAMLKPE--------------VSCYENIRSCARGALALLF-------LLGATWIFGVLHVVYG-S 219
                          250       260       270
                   ....*....|....*....|....*....|....*..
gi 1907068048 1089 ILFQILFAVFDSLQGFVIVMVHCILRREVQDAFrCRL 1125
Cdd:cd15437    220 VVTAYLFTISNAFQGMFIFIFLCVLSRKIQEEY-YRL 255
7tmB2_Latrophilin-1 cd16007
Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled ...
853-1127 5.67e-33

Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320673 [Multi-domain]  Cd Length: 258  Bit Score: 129.27  E-value: 5.67e-33
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  853 LALITLAVVYAAL--WRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTEAWQSY 930
Cdd:cd16007     14 ISLVCLAICISTFcfLRGLQTDRNTIHKNLCINLFLAELLFLIGIDKTQYQIACPIFAGLLHFFFLAAFSWLCLEGVQLY 93
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  931 MAVTGKIRTRLIRKRFLCL-GWGLPALVVATSVGFTrTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVIGILVFNK 1009
Cdd:cd16007     94 LMLVEVFESEYSRKKYYYLcGYCFPALVVGISAAID-YRSYGTEKACWLRVDNYFIWSFIGPVSFVIVVNLVFLMVTLHK 172
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1010 LVSRDGILdkklkhragqmsEPHSgltlkcAKCGVVSTTALSATTasnamaslwsscvVLPLLALTWMSAVLaMTDKRSI 1089
Cdd:cd16007    173 MIRSSSVL------------KPDS------SRLDNIKSWALGAIT-------------LLFLLGLTWAFGLL-FINKESV 220
                          250       260       270
                   ....*....|....*....|....*....|....*...
gi 1907068048 1090 LFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRN 1127
Cdd:cd16007    221 VMAYLFTTFNAFQGMFIFIFHCALQKKVHKEYSKCLRH 258
7tmB2_GPR116-like_Adhesion_VI cd15932
orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of ...
840-1122 1.16e-32

orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group VI adhesion GPCRs consist of orphan receptors GPR110, GPR111, GPR113, GPR115, GPR116, and closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR110 possesses a SEA box in the N-terminal has been identified as an oncogene over-expressed in lung and prostate cancer. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain. GPR112 has extremely long N-terminus (about 2,400 amino acids) containing a number of Ser/Thr-rich glycosylation sites and a pentraxin (PTX) domain. GPR116 has two C2-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320598 [Multi-domain]  Cd Length: 268  Bit Score: 128.58  E-value: 1.16e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  840 PSVTLI--VGSGLSCLALITLAVVYAALWRYI-RSE----RSIILINFCLSIISSNILILVG---QTQTHNKSICTTTTA 909
Cdd:cd15932      2 PALDYItyVGLGISILSLVLCLIIEALVWKSVtKNKtsymRHVCLVNIALSLLIADIWFIIGaaiSTPPNPSPACTAATF 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  910 FLHFFFLASFCWVLTEA----WQSYMAVTGKIRTRLIRKRFlCLGWGLPALVVATSVGFTR-TKGYGTDHYCWLSL-EGG 983
Cdd:cd15932     82 FIHFFYLALFFWMLTLGlllfYRLVLVFHDMSKSTMMAIAF-SLGYGCPLIIAIITVAATApQGGYTRKGVCWLNWdKTK 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  984 LLYAFVGPAAAVVLVNMVIGILVFNKLVsRDGILDKKLKHRagqmsephsgltlkcakcgvvsttalsattaSNAMASLW 1063
Cdd:cd15932    161 ALLAFVIPALAIVVVNFIILIVVIFKLL-RPSVGERPSKDE-------------------------------KNALVQIG 208
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1064 SSCVVL-PLLALTWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15932    209 KSVAILtPLLGLTWGFGLGTMIDPKSLAFHIIFAILNSFQGFFILVFGTLLDSKVREALL 268
7tmB2_EMR_Adhesion_II cd15931
EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of ...
840-1122 3.03e-32

EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. On the other hand, EMR2 generates four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320597 [Multi-domain]  Cd Length: 262  Bit Score: 127.25  E-value: 3.03e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  840 PSVTLI--VGSGLSCLALItLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLA 917
Cdd:cd15931      2 PFLEWInrVGVIVSLFCLG-LAIFTFLLCRWIPKINTTAHLHLCLCLSMSHTLFLAGIEYVENELACTVMAGLLHYLFLA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  918 SFCWVLTEAWQSYMAV-----TGKIRTRLIRKRFLCL-GWGLPALVVATSvGFTRTKGYGTDHYCWLSLEGGLLYAFVGP 991
Cdd:cd15931     81 SFVWMLLEALQLHLLVrrltkVQVIQRDGLPRPLLCLiGYGVPFLIVGVS-ALVYSDGYGEAKMCWLSQERGFNWSFLGP 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  992 AAAVVLVNMVIgilvfnkLVSRDGILDKKLKHRAGQMSephsglTLKcakcgvvSTTALSATtasnAMASLWsscvvlpL 1071
Cdd:cd15931    160 VIAIIGINWIL-------FCATLWCLRQTLSNMNSDIS------QLK-------DTRLLTFK----AVAQLF-------I 208
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1907068048 1072 LALTWMSAvLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15931    209 LGCTWVLG-LFQTNPVALVFQYLFTILNSLQGAFLFLVHCLLNKEVREEYI 258
7tmB2_CELSR1 cd15991
Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of ...
850-1122 3.72e-31

Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320657 [Multi-domain]  Cd Length: 254  Bit Score: 123.80  E-value: 3.72e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  850 LSCLALItLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTEAWQS 929
Cdd:cd15991     14 LSLVALL-ITFILLVLIRTLRSNLHSIHKNLVAALFFSELIFLIGINQTENPFVCTVVAILLHYFYMSTFAWMFVEGLHI 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  930 YMAVTGKIRTRLIRKRFL-CLGWGLPALVVATSVGFTrTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVIGILVFN 1008
Cdd:cd15991     93 YRMLTEVRNINTGHMRFYyVVGWGIPAIITGLAVGLD-PQGYGNPDFCWLSVQDTLIWSFAGPIGIVVIINTVIFVLAAK 171
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1009 KLVSRdgildkklKHRAGQmsephsgltlkcaKCGVVSTtalsattasnamasLWSSCVVLPLLALTWMSAVLAMtDKRS 1088
Cdd:cd15991    172 ASCGR--------RQRYFE-------------KSGVISM--------------LRTAFLLLLLISATWLLGLMAV-NSDT 215
                          250       260       270
                   ....*....|....*....|....*....|....
gi 1907068048 1089 ILFQILFAVFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15991    216 LSFHYLFAIFSCLQGIFIFFFHCIFNKEVRKHLK 249
7tmB2_Latrophilin cd15436
Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
842-1123 5.80e-31

Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320552 [Multi-domain]  Cd Length: 258  Bit Score: 123.36  E-value: 5.80e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  842 VTLIVGSGLScLALITLAVVYAAL--WRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASF 919
Cdd:cd15436      4 LFVITWVGIV-ISLVCLLICIFTFcfFRGLQTDRNTIHKNLCINLFIAELLFLIGINRTQYTIACPIFAGLLHFFFLAAF 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  920 CWVLTEAWQSYMAVTGKIRTRLIRKRFLCL-GWGLPALVVATSVGFTrTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLV 998
Cdd:cd15436     83 CWLCLEGVQLYLLLVEVFESEYSRRKYFYLcGYSFPALVVAVSAAID-YRSYGTEKACWLRVDNYFIWSFIGPVTFVITL 161
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  999 NMVIGILVFNKLVSRDGILdkklkhragqmsePHSGLTLKCAKCGVVSTTALsattasnamaslwsscvvLPLLALTWMS 1078
Cdd:cd15436    162 NLVFLVITLHKMVSHSDLL-------------KPDSSRLDNIKSWALGAIAL------------------LFLLGLTWSF 210
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*.
gi 1907068048 1079 AVLAMtDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAF-RC 1123
Cdd:cd15436    211 GLMFI-NEESVVMAYLFTIFNAFQGVFIFIFHCALQKKVRKEYsKC 255
7tmB2_GPR113 cd15253
orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G ...
840-1125 1.11e-30

orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR113 is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR115, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain, and is primarily expressed in a subset of taste receptor cells. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320381 [Multi-domain]  Cd Length: 271  Bit Score: 122.95  E-value: 1.11e-30
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  840 PSVTLI--VGSGLSCLALITLAVVYAALWR-YIRSE----RSIILINFCLSIISSNILILVGQ--TQTHNKSICTTTTAF 910
Cdd:cd15253      2 FWLDFLsqVGLGASILALLLCLGIYRLVWRsVVRNKisyfRHMTLVNIAFSLLLADTCFLGATflSAGHESPLCLAAAFL 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  911 LHFFFLASFCWVLTEA---WQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKG-YGTDHYCWLSLEGGLLY 986
Cdd:cd15253     82 CHFFYLATFFWMLVQAlmlFHQLLFVFHQLAKRSVLPLMVTLGYLCPLLIAAATVAYYYPKRqYLHEGACWLNGESGAIY 161
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  987 AFVGPAAAVVLVNMVIGILVFNKLvSRDGIldkklkhragqmSEPHSGLTLKcakcgvvsttalsattasnAMASLWSSC 1066
Cdd:cd15253    162 AFSIPVLAIVLVNLLVLFVVLMKL-MRPSV------------SEGPPPEERK-------------------ALLSIFKAL 209
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1067 VVL-PLLALTWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRL 1125
Cdd:cd15253    210 LVLtPVFGLTWGLGVATLTGESSQVSHYGFAILNAFQGVFILLFGCLMDKKVREALLKRL 269
7tmB2_Latrophilin-3 cd16005
Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled ...
846-1126 1.94e-30

Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320671 [Multi-domain]  Cd Length: 258  Bit Score: 121.59  E-value: 1.94e-30
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALItLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTE 925
Cdd:cd16005     10 VGILLSLVCLL-ICIFTFCFFRGLQSDRNTIHKNLCISLFVAELLFLIGINRTDQPIACAVFAALLHFFFLAAFTWMFLE 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  926 AWQSYMAVTGKIRTRLIRKR-FLCLGWGLPALVVATSVGfTRTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVIGI 1004
Cdd:cd16005     89 GVQLYIMLVEVFESEHSRRKyFYLVGYGMPALIVAVSAA-VDYRSYGTDKVCWLRLDTYFIWSFIGPATLIIMLNVIFLG 167
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1005 LVFNKLVSRDGILdkklkhragqmsEPHSGLTLKCaKCGVVSTTALsattasnamaslwsscvvLPLLALTWMSAVLAMt 1084
Cdd:cd16005    168 IALYKMFHHTAIL------------KPESGCLDNI-KSWVIGAIAL------------------LCLLGLTWAFGLMYI- 215
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|..
gi 1907068048 1085 DKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLR 1126
Cdd:cd16005    216 NESTVIMAYLFTIFNSLQGMFIFIFHCVLQKKVRKEYGKCLR 257
7tmB2_GPR144 cd15255
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
846-1122 4.16e-30

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR144 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR133. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320383 [Multi-domain]  Cd Length: 263  Bit Score: 121.11  E-value: 4.16e-30
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALITLAVVYAALwRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTE 925
Cdd:cd15255     10 IGCGVSLCALIVTFILFLAV-GVPKSERTTVHKNLIFALAAAEFLLMFSEWAKGNQVACWAVTALLHLFFLAAFSWMLVE 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  926 A---WQSYMAVTGKIRTRLirKRFLCLGWGLPALVVATSVGFTRTKgYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVI 1002
Cdd:cd15255     89 GlllWSKVVAVNMSEDRRM--KFYYVTGWGLPVVIVAVTLATSFNK-YVADQHCWLNVQTDIIWAFVGPVLFVLTVNTFV 165
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1003 GILVFNKLVSRdgildkklKHRAGQMSEPHSGLTLKcakcgvvsttalsatTASNAMASLWSSCVVLPLLALTWMSAVLA 1082
Cdd:cd15255    166 LFRVVMVTVSS--------ARRRAKMLTPSSDLEKQ---------------IGIQIWATAKPVLVLLPVLGLTWLCGVLV 222
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|
gi 1907068048 1083 MTdkrSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15255    223 HL---SDVWAYVFITLNSFQGLYIFLVYAIYNSEVRNAIQ 259
7tmB2_Latrophilin-2 cd16006
Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled ...
850-1121 1.39e-28

Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320672 [Multi-domain]  Cd Length: 258  Bit Score: 116.55  E-value: 1.39e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  850 LSCLALITLAVVYaalWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTEAWQS 929
Cdd:cd16006     16 LVCLAICIFTFCF---FRGLQSDRNTIHKNLCINLFIAEFIFLIGIDKTEYKIACPIFAGLLHFFFLAAFAWMCLEGVQL 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  930 YMAVTGKIRTRLIRKRFLCL-GWGLPALVVATSVGFTrTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVIGILVFN 1008
Cdd:cd16006     93 YLMLVEVFESEYSRKKYYYVaGYLFPATVVGVSAAID-YKSYGTEKACWLRVDNYFIWSFIGPVTFIILLNLIFLVITLC 171
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1009 KLVSRDGILdkklkhragqmsEPHSgltlkcAKCGVVSTTALSATtasnamaslwsscVVLPLLALTWMSAVLAMTDKrS 1088
Cdd:cd16006    172 KMVKHSNTL------------KPDS------SRLENIKSWVLGAF-------------ALLCLLGLTWSFGLLFINEE-T 219
                          250       260       270
                   ....*....|....*....|....*....|...
gi 1907068048 1089 ILFQILFAVFDSLQGFVIVMVHCILRREVQDAF 1121
Cdd:cd16006    220 IVMAYLFTIFNAFQGMFIFIFHCALQKKVRKEY 252
7tmB2_CELSR2 cd15992
Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of ...
853-1122 3.56e-27

Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320658  Cd Length: 255  Bit Score: 112.22  E-value: 3.56e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  853 LALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTEAWQSYMA 932
Cdd:cd15992     16 LGFLLLTFLFLLCLRALRSNKTSIRKNGATALFLSELVFILGINQADNPFACTVIAILLHFFYLCTFSWLFLEGLHIYRM 95
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  933 VTG--KIRTRLIRKRFLcLGWGLPALVVATSVGFTrTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVIGILVFNKL 1010
Cdd:cd15992     96 LSEvrDINYGPMRFYYL-IGWGVPAFITGLAVGLD-PEGYGNPDFCWLSIYDTLIWSFAGPVAFAVSMNVFLYILSSRAS 173
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1011 VS--RDGILDKKLkhragqmsePHSGLTlkcakcgvvsttalsattasnamaslwSSCVVLPLLALTWMSAVLAMtDKRS 1088
Cdd:cd15992    174 CSaqQQSFEKKKG---------PVSGLR---------------------------TAFTVLLLVSVTCLLALLSV-NSDV 216
                          250       260       270
                   ....*....|....*....|....*....|....
gi 1907068048 1089 ILFQILFAVFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15992    217 ILFHYLFAGFNCLQGPFIFLSHVVLLKEVRKALK 250
7tmB2_CELSR3 cd15993
Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of ...
850-1122 5.45e-26

Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuronal migration and axon guidance in the CNS. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320659 [Multi-domain]  Cd Length: 254  Bit Score: 108.78  E-value: 5.45e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  850 LSCLALITLAVVYAALwRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTEAWQS 929
Cdd:cd15993     14 ASLAALVLTFSVLTCL-RGLKSNTRGIHSNIAAALFLSELLFLLGINRTENQFLCTVVAILLHYFFLSTFAWLFVQGLHI 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  930 Y-MAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTrTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVIGILVFN 1008
Cdd:cd15993     93 YrMQTEARNVNFGAMRFYYAIGWGVPAIITGLAVGLD-PEGYGNPDFCWISIHDKLVWSFAGPIVVVIVMNGVMFLLVAR 171
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1009 KLVSrdgildkklkhrAGQMsephsgltlKCAKCGVVSTtalsattasnamasLWSSCVVLPLLALTWMSAVLAMTDkrS 1088
Cdd:cd15993    172 MSCS------------PGQK---------ETKKTSVLMT--------------LRSSFLLLLLISATWLFGLLAVNN--S 214
                          250       260       270
                   ....*....|....*....|....*....|....*
gi 1907068048 1089 IL-FQILFAVFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15993    215 VLaFHYLHAILCCLQGLAVLLLFCVLNEEVQEAWK 249
7tmB2_GPR126-like_Adhesion_VIII cd15258
orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family ...
846-1118 3.09e-25

orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Group VIII adhesion GPCRs include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, GPR114, and GPR126. GPR56 is involved in the regulation of oligodendrocyte development and myelination in the central nervous system via coupling to G(12/13) proteins, which leads to the activation of RhoA GTPase. GPR126, on the other hand, is required for Schwann cells, but not oligodendrocyte myelination in the peripheral nervous system. Gpr64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320386 [Multi-domain]  Cd Length: 267  Bit Score: 106.73  E-value: 3.09e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILV--GQTQTHNKSICTTTTAFLHFFFLASFCWVL 923
Cdd:cd15258     10 VGCGISAIFLAITILTYIAFRKLRRDYPSKIHMNLCAALLLLNLAFLLssWIASFGSDGLCIAVAVALHYFLLACLTWMG 89
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  924 TEAWQSYMAVtGKIRTRLIRKRFL---CLGWGLPALVVaTSVGFTRTKGYGT-----------DHYCWLSLEGGLLYAFV 989
Cdd:cd15258     90 LEAFHLYLLL-VKVFNTYIRRYILklcLVGWGLPALLV-TLVLSVRSDNYGPitipngegfqnDSFCWIRDPVVFYITVV 167
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  990 GPAAAVVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLkcakcgvvsttalsattasnamaslwsscvvl 1069
Cdd:cd15258    168 GYFGLTFLFNMVMLATVLVQICRLREKAQATPRKRALHDLLTLLGLTF-------------------------------- 215
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*....
gi 1907068048 1070 pLLALTWMSAVLAMTDKRsILFQILFAVFDSLQGFVIVMVHCILRREVQ 1118
Cdd:cd15258    216 -LLGLTWGLAFFAWGPFN-LPFLYLFAIFNSLQGFFIFIWYCSMKENVR 262
7tmB2_GPR112 cd15997
Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane ...
843-1125 6.09e-25

Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR112 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR114, and GPR126. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320663  Cd Length: 269  Bit Score: 105.90  E-value: 6.09e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  843 TLI--VGSGLSCLAL-ITLaVVYAALWRYIRSERSIILINFCLSIISSNILILVGQ--TQTHNKSICTTTTAFLHFFFLA 917
Cdd:cd15997      5 TLItyLGCGISSIFLgITL-VTYLAFEKLRRDYPSKILINLCTALLMLNLVFLLNSwlSSFNNYGLCITVAAFLHYFLLA 83
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  918 SFCWVLTEAWQSYMAVTgKIRTRLIRK---RFLCLGWGLPALVVATsVGFTRTKGYGT----------DHYCWLSLEGGL 984
Cdd:cd15997     84 SFTWMGLEAVHMYFALV-KVFNIYIPNyilKFCIAGWGIPAVVVAL-VLAINKDFYGNelssdslhpsTPFCWIQDDVVF 161
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  985 LYAFVGPAAAVVLVNMVIGILVFNKLVSRdgildKKLKHRAGQMSEPHSGLTlkcakcgvvSTTALSAttasnamaslws 1064
Cdd:cd15997    162 YISVVAYFCLIFLCNISMFITVLIQIRSM-----KAKKPSRNWKQGFLHDLK---------SVASLTF------------ 215
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907068048 1065 scvvlpLLALTWMSAVLAMTDKRsILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRL 1125
Cdd:cd15997    216 ------LLGLTWGFAFFAWGPVR-IFFLYLFSICNTLQGFFIFVFHCLMKENVRKQWRIHL 269
7tmB2_GPR111_115 cd15994
orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of ...
846-1122 4.94e-24

orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR111 and GPR115 are highly homologous orphan receptors that belong to group VI adhesion-GPCRs along with GPR110, GPR113, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS. Both GPR111 and GPR5 are present only in land-living animals and are predominantly expressed in the developing skin.


Pssm-ID: 320660 [Multi-domain]  Cd Length: 267  Bit Score: 103.38  E-value: 4.94e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALITLAVVYAALW-RYIRSE----RSIILINFCLSIISSNILILVG---QTQTHNKSICTTTTAFLHFFFLA 917
Cdd:cd15994     10 IGLGLSIFSLALCLTIEAVVWsHVTKTEitymRHVCIVNIATSLLIADVWFILAsivHNTALNYPLCVAATFFLHFFYLS 89
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  918 SFCWVLTEAW---QSYMAVTGKI-RTRLIRKRFlCLGWGLPALVVATSVGFTR-TKGYGTDHYCWLSL-EGGLLYAFVGP 991
Cdd:cd15994     90 LFFWMLTKALlilYGILLVFFKItKSVFIATAF-SIGYGCPLVIAVLTVAITEpKKGYLRPEACWLNWdETKALLAFIIP 168
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  992 AAAVVLVNMVIGILVFNKlVSRDGILDKKLKHragqmsephsgltlkcakcgVVSTTALSATTAsnamaslwsscVVLPL 1071
Cdd:cd15994    169 ALSIVVVNLIVVGVVVVK-TQRSSIGESCKQD--------------------VSNIIRISKNVA-----------ILTPL 216
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1907068048 1072 LALTWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15994    217 LGLTWGFGLATIIDSRSLPFHIIFALLNAFQGFFILLFGTILDRKIRIALY 267
7tmB3_Methuselah-like cd15039
Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G ...
845-1117 7.77e-23

Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G protein-coupled receptors; The subfamily B3 of class B GPCRs consists of Methuselah (Mth) and its closely related proteins found in bilateria. Mth was originally identified in Drosophila as a GPCR affecting stress resistance and aging. In addition to the seven transmembrane helices, Mth contains an N-terminal extracellular domain involved in ligand binding, and a third intracellular loop (IC3) required for the specificity of G-protein coupling. Drosophila Mth mutants showed an increase in average lifespan by 35% and greater resistance to a variety of stress factors, including starvation, high temperature, and paraquat-induced oxidative toxicity. Moreover, mutations in two endogenous peptide ligands of Methuselah, Stunted A and B, showed an increased in lifespan and resistance to oxidative stress induced by dietary paraquat. These results strongly suggest that the Stunted-Methuselah system plays important roles in stress response and aging.


Pssm-ID: 410632 [Multi-domain]  Cd Length: 270  Bit Score: 99.99  E-value: 7.77e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  845 IVGSGLSCLALITLAVVYAalwrYIRSERSI---ILINFCLSIISSNILILVGQTQTHNK-SICTTTTAFLHFFFLASFC 920
Cdd:cd15039      9 LIGLIISLVFLLLTLAVYA----LLPELRNLhgkCLMCLVLSLFVAYLLLLIGQLLSSGDsTLCVALGILLHFFFLAAFF 84
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  921 WVLTEAWQSYMAVTGKIRTRL---IRKRFL---CLGWGLPALVVATSVGFTRTK-------GYGtDHYCWLSLEGGLLYA 987
Cdd:cd15039     85 WLNVMSFDIWRTFRGKRSSSSrskERKRFLrysLYAWGVPLLLVAVTIIVDFSPntdslrpGYG-EGSCWISNPWALLLY 163
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  988 FVGPAAAVVLVNMVIGILVFNKLVSRdgildKKLKHRAGQMSEPHSGLTLKCAKCGVVsttalsattasnamaslwsscv 1067
Cdd:cd15039    164 FYGPVALLLLFNIILFILTAIRIRKV-----KKETAKVQSRLRSDKQRFRLYLKLFVI---------------------- 216
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1068 vlplLALTWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVhCILRREV 1117
Cdd:cd15039    217 ----MGVTWILEIISWFVGGSSVLWYIFDILNGLQGVFIFLI-FVCKRRV 261
7tmB2_GPR116_Ig-Hepta cd15254
The immunoglobulin-repeat-containing receptor Ig-hepta/GPR116, member of the class B2 family ...
846-1120 1.40e-22

The immunoglobulin-repeat-containing receptor Ig-hepta/GPR116, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR116 (also known as Ig-hepta) is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR113, and GPR115. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR116 has four I-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. GPR116 is highly expressed in fetal and adult lung, and it has been shown to regulate lung surfactant levels as well as to stimulate breast cancer metastasis through a G(q)-p63-RhoGEF-Rho GTPase signaling pathway. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320382 [Multi-domain]  Cd Length: 275  Bit Score: 99.49  E-value: 1.40e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALITLAVVYAALWRYIRSERS-----IILINFCLSIISSNILILV-----GQTQTHNKSICTTTTAFLHFFF 915
Cdd:cd15254     10 IGLSISILSLAICIVIESLVWKSVTKNRTsymrhVCILNIAVSLLIADIWFIVvaaiqDQNYAVNGNVCVAATFFIHFFY 89
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  916 LASFCWVLTEAWQSYMAVTGKIR--TRLIRKRF-LCLGWGLPALVVATSVGFTRTK-GYGTDHYCWLSLEGG-LLYAFVG 990
Cdd:cd15254     90 LCVFFWMLALGLMLFYRLVFILHdtSKTIQKAVaFCLGYGCPLIISVITIAVTLPRdSYTRKKVCWLNWEDSkALLAFVI 169
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  991 PAAAVVLVNMVIGILVFNKlVSRDGILDKKLKHRAGQMsephsgltLKCAKcgvvsttalsattasnamaslwSSCVVLP 1070
Cdd:cd15254    170 PALIIVAVNSIITVVVIVK-ILRPSIGEKPSKQERSSL--------FQIIK----------------------SIGVLTP 218
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1071 LLALTWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDA 1120
Cdd:cd15254    219 LLGLTWGFGLATVIKGSSIVFHILFTLLNAFQGLFILVFGTLWDKKVQEA 268
7tmB2_GPR126 cd15996
orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G ...
846-1122 4.01e-22

orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR126 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, and GPR114. GPR126 is required in Schwann cells for proper differentiation and myelination via G-Protein Activation. GPR126 is believed to couple to G(s)-protein, which leads to activation of adenylate cyclase for cAMP production. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320662  Cd Length: 271  Bit Score: 98.04  E-value: 4.01e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILV-GQTQTHN-KSICTTTTAFLHFFFLASFCWVL 923
Cdd:cd15996     10 IGCGISAIFSAATLLTYIAFEKLRRDYPSKILMNLSTALLFLNLVFLLdGWIASFEiDELCITVAVLLHFFLLATFTWMG 89
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  924 TEAWQSYMAVTgKIRTRLIRK---RFLCLGWGLPALVVATSVGFTRT-----------KGYGTDHYCWLSLEGGLLYAFV 989
Cdd:cd15996     90 LEAIHMYIALV-KVFNTYIRRyilKFCIIGWGLPALIVSIVLASTNDnygygyygkdkDGQGGDEFCWIKNPVVFYVTCA 168
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  990 GPAAAVVLVNMVIGILVFNKLVSRDGildkKLKHRagqmsephsgltlkcakcgvvsttalsaTTASNAMASLWSSCVVL 1069
Cdd:cd15996    169 AYFGIMFLMNVAMFIVVMVQICGRNG----KRSNR----------------------------TLREEILRNLRSVVSLT 216
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1907068048 1070 PLLALTWMSAVLAMtDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15996    217 FLLGMTWGFAFFAW-GPVNLAFMYLFTIFNSLQGLFIFVFHCALKENVQKQWR 268
7tmB2_GPR64 cd15444
orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B ...
846-1122 4.11e-22

orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B secretin-like receptors of seven-transmembrane G protein-coupled receptors; GPR64 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR97, GPR112, GPR114, and GPR126. GPR64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320560 [Multi-domain]  Cd Length: 271  Bit Score: 97.97  E-value: 4.11e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQ---TQTHNKSICTTTTAFLHFFFLASFCWV 922
Cdd:cd15444     10 IGCGLSAIFLSVTLVTYIAFEKIRRDYPSKILIQLCVALLLLNLVFLLDSwiaLYKDIVGLCISVAVFLHYFLLVSFTWM 89
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  923 LTEAWQSYMAVTgKIRTRLIRK---RFLCLGWGLPALVVATSVGFTR------TKGY----GTDHYCWLSLEGGLLYAFV 989
Cdd:cd15444     90 GLEAFHMYLALV-KVFNTYIRKyilKFCIVGWGVPAVVVAIVLAVSKdnyglgSYGKspngSTDDFCWINNNIVFYITVV 168
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  990 GPAAAVVLVNMVIGILVFNKLvsrdgildkklkhragqmsephsgltlkcakCGVVSTTALSATTaSNAMASLWSSCVVL 1069
Cdd:cd15444    169 GYFCVIFLLNISMFIVVLVQL-------------------------------CRIKKQKQLGAQR-KTSLQDLRSVAGIT 216
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1907068048 1070 PLLALTWMSAVLAMtDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15444    217 FLLGITWGFAFFAW-GPVNLAFMYLFAIFNTLQGFFIFIFYCVAKENVRKQWR 268
7tmB2_GPR128 cd15257
orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G ...
846-1113 1.55e-19

orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR128 is an orphan receptor of the adhesion family (subclass B2) that belongs to the class B GPCRs. Expression of GPR128 was detected in the mouse intestinal mucosa and is thought to be involved in energy balance, as its knockout mice showed a decrease in body weight gain and an increase in intestinal contraction frequency compared to wild-type controls. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320385 [Multi-domain]  Cd Length: 303  Bit Score: 91.09  E-value: 1.55e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALItLAVVYAALWRYIRSER-SIILINFCLSIISSNILILVGQTQTHNK----------------------- 901
Cdd:cd15257     10 IGCVLSIAGLV-ITIIFHLHTRKLRKSSvTWVLLNLCSSLLLFNIIFTSGVENTNNDyeistvpdretntvllseeyvep 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  902 --SICTTTTAFLHFFFLASFCWVLTEAWQSYMAVtgkIRTRLIRKRFLCL-----GWGLPALVVATSVGFT--------- 965
Cdd:cd15257     89 dtDVCTAVAALLHYFLLVTFMWNAVYSAQLYLLL---IRMMKPLPEMFILqasaiGWGIPAVVVAITLGATyrfptslpv 165
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  966 RTKGYGTDHYCWL-------SLEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSRDgILDKKLKHRAgqmsephsgltlk 1038
Cdd:cd15257    166 FTRTYRQEEFCWLaaldknfDIKKPLLWGFLLPVGLILITNVILFIMTSQKVLKKN-NKKLTTKKRS------------- 231
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907068048 1039 cakcgvvsttalsattasnAMASLWSSCVVLPLLALTWMSA--VLAMTDKRSILFQILFAVFDSLQGFVIvmvhCIL 1113
Cdd:cd15257    232 -------------------YMKKIYITVSVAVVFGITWILGylMLVNNDLSKLVFSYIFCITNTTQGVQI----FIL 285
7tmB1_CRF-R1 cd15445
corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane ...
852-1126 1.16e-18

corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320561 [Multi-domain]  Cd Length: 265  Bit Score: 87.68  E-value: 1.16e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  852 CLALITLAVVYAALWRY--IRSERSIILINFCLSIISSNILILVGQT----QTHNKSI--CTTTTAFLHFFFLASFCWVL 923
Cdd:cd15445     13 CISLVALLVAFVLFLRLrsIRCLRNIIHWNLITAFILRNATWFVVQLtmspEVHQSNVvwCRLVTAAYNYFHVTNFFWMF 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  924 TEAWQSYMAVTGKIRTRLIRK-RFLCLGWGLP-ALVVATSVGftrtKGYGTDHYCWLSLEGGLL--YAFVGPAAAVVLVN 999
Cdd:cd15445     93 GEGCYLHTAIVLTYSTDKLRKwMFICIGWCIPfPIIVAWAIG----KLYYDNEKCWFGKRAGVYtdYIYQGPMILVLLIN 168
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1000 MvigILVFNklVSRdgILDKKLkhRAGQMSEphsglTLKCAKcgvvsttALSATTasnamaslwsscVVLPLLALTWMSA 1079
Cdd:cd15445    169 F---IFLFN--IVR--ILMTKL--RASTTSE-----TIQYRK-------AVKATL------------VLLPLLGITYMLF 215
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*....
gi 1907068048 1080 -VLAMTDKRSILFQILFAVF-DSLQGFVIVMVHCILRREVQDAFRCRLR 1126
Cdd:cd15445    216 fVNPGEDEISRIVFIYFNSFlESFQGFFVSVFYCFLNSEVRSAVRKRWH 264
7tmB1_CRF-R cd15264
corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane ...
842-1127 1.39e-18

corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320392 [Multi-domain]  Cd Length: 265  Bit Score: 87.47  E-value: 1.39e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  842 VTLI---VGSGLSCLALITLAVVYAALwRYIRSERSIILINFCLSIISSNIL------ILVGQTQTHNKSICTTTTAFLH 912
Cdd:cd15264      3 VALIiyyLGFSISLVALAVALIIFLYF-RSLRCLRNNIHCNLIVTFILRNVTwfimqnTLTEIHHQSNQWVCRLIVTVYN 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  913 FFFLASFCWVLTEAWQSYMAVTGKIRTRLIRK-RFLCLGWGLPA-LVVATSVGftrtKGYGTDHYCWLSLEGGLLYAFV- 989
Cdd:cd15264     82 YFQVTNFFWMFVEGLYLHTMIVWAYSADKIRFwYYIVIGWCIPCpFVLAWAIV----KLLYENEHCWLPKSENSYYDYIy 157
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  990 -GPAAAVVLVNMVIgilVFNKLVsrdgILDKKLkhRAGQMSEPHSgltlkcakcgvvSTTALSATTasnamaslwsscVV 1068
Cdd:cd15264    158 qGPILLVLLINFIF---LFNIVW----VLITKL--RASNTLETIQ------------YRKAVKATL------------VL 204
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907068048 1069 LPLLALTWMSAVLAMT-DKRSILFQILFAVF-DSLQGFVIVMVHCILRREVQDAFRCRLRN 1127
Cdd:cd15264    205 LPLLGITYMLFFINPGdDKTSRLVFIYFNTFlQSFQGLFVAVFYCFLNGEVRSAIRKKFSR 265
7tmB1_hormone_R cd15041
The subfamily B1 of hormone receptors (secretin-like), member of the class B family ...
845-1127 8.32e-17

The subfamily B1 of hormone receptors (secretin-like), member of the class B family seven-transmembrane G protein-coupled receptors; The B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of this subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. Moreover, the B1 subfamily receptors play key roles in hormone homeostasis and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression). Furthermore, the subfamilies B2 and B3 consist of receptors that are capable of interacting with epidermal growth factors (EGF) and the Drosophila melanogaster Methuselah gene product (Mth), respectively. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 341321 [Multi-domain]  Cd Length: 273  Bit Score: 82.27  E-value: 8.32e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  845 IVGSGLSCLALItLAVVYAALWRYIRSERSIILINFCLSIISSNILILV-------------GQTQTHNKS--ICTTTTA 909
Cdd:cd15041      9 LVGYSLSLVALL-PAIVIFLYFRSLRCTRIRLHINLFLSFILRAVFWIIwdllvvydrltssGVETVLMQNpvGCKLLSV 87
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  910 FLHFFFLASFCWVLTEAWQSYMAVT---GKIRTRLirKRFLCLGWGLPALVVATsvgFTRTKGYGTDHYCWLSL-EGGLL 985
Cdd:cd15041     88 LKRYFKSANYFWMLCEGLYLHRLIVvafFSEPSSL--KLYYAIGWGLPLVIVVI---WAIVRALLSNESCWISYnNGHYE 162
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  986 YAFVGPAAAVVLVNMV--IGILVfnklvsrdgILDKKLkhRAGQMSEPhsgltlkcakcgvvsttalsattaSNAMASLW 1063
Cdd:cd15041    163 WILYGPNLLALLVNLFflINILR---------ILLTKL--RSHPNAEP------------------------SNYRKAVK 207
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907068048 1064 SSCVVLPLLALTWMsavLAM-----TDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRN 1127
Cdd:cd15041    208 ATLILIPLFGIQYL---LTIyrppdGSEGELVYEYFNAILNSSQGFFVAVIYCFLNGEVQSELKRKWSR 273
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
311-361 3.37e-16

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 73.78  E-value: 3.37e-16
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 1907068048   311 WEEWSPWSLCSFTCGRGQRTRTRSCT--PPQYGGRPCEGPETHHKPCNIALCP 361
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCCspPPQNGGGPCTGEDVETRACNEQPCP 53
7tmB2_GPR124-like_Adhesion_III cd15259
orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of ...
846-1122 3.69e-16

orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group III adhesion GPCRs include orphan GPR123, GPR124, GPR125, and their closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. GPR123 is predominantly expressed in the CNS including thalamus, brain stem and regions containing large pyramidal cells. GPR124, also known as tumor endothelial marker 5 (TEM5), is highly expressed in tumor vessels and in the vasculature of the developing embryo. GPR124 is essentially required for proper angiogenic sprouting into neural tissue, CNS-specific vascularization, and formation of the blood-brain barrier. GPR124 also interacts with the PDZ domain of DLG1 (discs large homolog 1) through its PDZ-binding motif. Recently, studies of double-knockout mice showed that GPR124 functions as a co-activator of Wnt7a/Wnt7b-dependent beta-catenin signaling in brain endothelium. Furthermore, WNT7-stimulated beta-catenin signaling is regulated by GPR124's intracellular PDZ binding motif and leucine-rich repeats (LRR) in its N-terminal extracellular domain. GPR125 directly interacts with dishevelled (Dvl) via its intracellular C-terminus, and together, GPR125 and Dvl recruit a subset of planar cell polarity (PCP) components into membrane subdomains, a prerequisite for activation of Wnt/PCP signaling. Thus, GPR125 influences the noncanonical WNT/PCP pathway, which does not involve beta-catenin, through interacting with and modulating the distribution of Dvl.


Pssm-ID: 320387 [Multi-domain]  Cd Length: 260  Bit Score: 80.11  E-value: 3.69e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALITLAVVYAALWRYIRSERSI--ILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWV- 922
Cdd:cd15259     10 AGAALCLLCLLATIITYIVFHRLIRISRKGrhMLVNLCLHLLLTCVVFVGGINRTANQLVCQAVGILLHYSTLCTLLWVg 89
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  923 ---------LTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGfTRTKGYGTDHYCWLSLEGGLLyAFVGPAA 993
Cdd:cd15259     90 vtarnmykqVTKTAKPPQDEDQPPRPPKPMLRFYLIGWGIPLIICGITAA-VNLDNYSTYDYCWLAWDPSLG-AFYGPAA 167
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  994 AVVLVNMVIGIlvfnklvsrdgildkklkhragqmsephsgltlkCAKCgvvsttALSATTASNaMASLWSSCVVLPLLA 1073
Cdd:cd15259    168 LIVLVNCIYFL----------------------------------RIYC------QLKGAPVSF-QSQLRGAVITLFLYV 206
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1907068048 1074 LTWMSAVLAMTDKR--SILFQILFAVFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15259    207 AMWACGALAVSQRYflDLVFSCLYGATCSSLGLFVLIHHCLSREDVRQSWR 257
7tmB2_GPR125 cd15999
G protein-coupled receptor 125, member of the class B2 family of seven-transmembrane G ...
853-1121 2.34e-15

G protein-coupled receptor 125, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR125 is an orphan receptor that has been classified as that belongs to the group III of adhesion GPCRs, which also includes orphan receptors GPR123 and GPR124. GPR125 directly interacts with dishevelled (Dvl) via its intracellular C-terminus, and together, GPR125 and Dvl recruit a subset of planar cell polarity (PCP) components into membrane subdomains, a prerequisite for activation of Wnt/PCP signaling. Thus, GPR125 influences the noncanonical WNT/PCP pathway, which does not involve beta-catenin, through interacting with and modulating the distribution of Dvl. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320665  Cd Length: 312  Bit Score: 78.75  E-value: 2.34e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  853 LALITLAVVYAALWRYIRSERSI--ILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTEAWQSY 930
Cdd:cd15999     17 LCLLTIIVSYIYHHSLVRISRKSwhMLVNLCFHIFLTCAVFVGGINQTRNASVCQAVGIILHYSTLATVLWVGVTARNIY 96
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  931 MAVTGKI-------------RTRLirkRFLCLGWGLPALVVATSVGfTRTKGYGTD---HYCWLSLEGGlLYAFVGPAAA 994
Cdd:cd15999     97 KQVTRKAkrcqdpdepppppRPML---RFYLIGGGIPIIVCGITAA-ANIKNYGSRpnaPYCWMAWEPS-LGAFYGPAGF 171
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  995 VVLVNMVIGILVFNKLvsrdgildKKLKHRAGQMSEP----------------HSGLTLKCAKCGVVSTTALSatTASNA 1058
Cdd:cd15999    172 IIFVNCMYFLSIFIQL--------KRHPERKYELKEPteeqqrlaasehgelnHQDSGSSSASCSLVSTSALE--NEHSF 241
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907068048 1059 MASLWSSCVVLPLLALTWMSAVLAMTD--KRSILFQILFAVFD-SLQGFVIVMvHCILRREVQDAF 1121
Cdd:cd15999    242 QAQLLGASLALFLYVALWIFGALAVSLyyPMDLVFSCLFGATClSLGAFLVVH-HCVNREDVRRAW 306
7tmB1_CRF-R2 cd15446
corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane ...
846-1124 3.31e-15

corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320562 [Multi-domain]  Cd Length: 264  Bit Score: 77.31  E-value: 3.31e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALITLAVVYAALwRYIRSERSIILINFCLSIISSNILILVGQTQTH-----NKSICTTTTAFLHFFFLASFC 920
Cdd:cd15446     10 LGHCISVGALVVAFLLFLCL-RSIRCLRNIIHWNLITTFILRNVMWFLLQMIDHnihesNEVWCRCITTIYNYFVVTNFF 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  921 WVLTEAWQSYMAVTGKIRTRLIRK-RFLCLGWGLPA-LVVATSVGftrtKGYGTDHYCWLSLEGGLL--YAFVGPAAAVV 996
Cdd:cd15446     89 WMFVEGCYLHTAIVMTYSTDKLRKwVFLFIGWCIPCpIIVAWAIG----KLYYENEQCWFGKEPGKYidYIYQGPVILVL 164
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  997 LVNMVigiLVFNklVSRdgILDKKLkhRAGQMSEphsglTLKCAKcgvvsttALSATTasnamaslwsscVVLPLLALTW 1076
Cdd:cd15446    165 LINFV---FLFN--IVR--ILMTKL--RASTTSE-----TIQYRK-------AVKATL------------VLLPLLGITY 211
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907068048 1077 MsaVLAMTDKRSILFQILFAVFD----SLQGFVIVMVHCILRREVQDAFRCR 1124
Cdd:cd15446    212 M--LFFVNPGEDDISQIVFIYFNsflqSFQGFFVSVFYCFLNGEVRSAARKR 261
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
779-830 7.21e-15

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


Pssm-ID: 197639  Cd Length: 49  Bit Score: 70.11  E-value: 7.21e-15
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|..
gi 1907068048   779 NPYCVLWDdsksnESLGTWSTQGCKTVLTDASHTKCLCDRLSTFAILAQQPR 830
Cdd:smart00303    2 NPICVFWD-----ESSGEWSTRGCELLETNGTHTTCSCNHLTTFAVLMDVPP 48
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
366-415 5.50e-14

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 67.61  E-value: 5.50e-14
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|..
gi 1907068048   366 WQEWSSWSHCSVTCSNGTQQRSRQCT--AAAHGGSECRGPWAESRECYNPEC 415
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCCspPPQNGGGPCTGEDVETRACNEQPC 52
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
259-306 8.44e-14

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 67.23  E-value: 8.44e-14
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|..
gi 1907068048   259 EWSQWSACSVTCGQGSQVRTRTCVSPY----GTHCSGPLRESRVCnNTALCP 306
Cdd:smart00209    3 EWSEWSPCSVTCGGGVQTRTRSCCSPPpqngGGPCTGEDVETRAC-NEQPCP 53
7tmB1_DH_R cd15263
insect diuretic hormone receptors, member of the class B family of seven-transmembrane G ...
852-1122 1.07e-13

insect diuretic hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes G protein-coupled receptors that specifically bind to insect diuretic hormones found in Manduca sexta (moth) and Acheta domesticus (the house cricket), among others. Insect diuretic hormone and their GPCRs play critical roles in the regulation of water and ion balance. Thus they are attractive targets for developing new insecticides. Activation of the diuretic hormone receptors stimulate adenylate cyclase, thereby increasing cAMP levels in Malpighian tube. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of Gs family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx.


Pssm-ID: 320391 [Multi-domain]  Cd Length: 272  Bit Score: 73.17  E-value: 1.07e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  852 CLALITLAVvyaALWRYI-----RSERSIILINFCLSIISSNI-----LILVGQTQTHNKSiCTTTTAFLHFFFLASFCW 921
Cdd:cd15263     13 SLSLVALSL---ALWIFLyfkdlRCLRNTIHTNLMFTYILADLtwiltLTLQVSIGEDQKS-CIILVVLLHYFHLTNFFW 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  922 VLTEAWQSYMAVTGKIRTRLIRKR-FLCLGWGLPALVV-----ATSVGFTRTKGYG-------------TDHYCWLsleg 982
Cdd:cd15263     89 MFVEGLYLYMLVVETFSGENIKLRvYAFIGWGIPAVVIviwaiVKALAPTAPNTALdpngllkhcpwmaEHIVDWI---- 164
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  983 gllyaFVGPAAAVVLVNMVIgilvfnkLVSRDGILDKKLKhragqmsephsgltlkcakcgvvsttalSATTASN----- 1057
Cdd:cd15263    165 -----FQGPAILVLAVNLVF-------LVRIMWVLITKLR----------------------------SANTVETqqyrk 204
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907068048 1058 -AMASLwsscVVLPLLALTWMSAVLAMTDKRS-ILFQILFAVFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15263    205 aAKALL----VLIPLLGITYILVIAGPTEGIAaNIFEYVRAVLLSTQGFTVALFYCFLNTEVRNTLR 267
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
780-825 1.76e-13

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


Pssm-ID: 460350  Cd Length: 44  Bit Score: 65.79  E-value: 1.76e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 1907068048  780 PYCVLWDDSksNESLGTWSTQGCKTVLTDASHTKCLCDRLSTFAIL 825
Cdd:pfam01825    1 PQCVFWDFT--NSTTGRWSTEGCTTVSLNDTHTVCSCNHLTSFAVL 44
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
313-360 4.81e-13

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 64.99  E-value: 4.81e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 1907068048  313 EWSPWSLCSFTCGRGQRTRTRS-CTPPQYGGRPCeGPETHHKPCNIALC 360
Cdd:pfam19028    5 EWSEWSECSVTCGGGVQTRTRTvIVEPQNGGRPC-PELLERRPCNLPPC 52
TSP_1 pfam00090
Thrombospondin type 1 domain;
259-300 8.60e-13

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 63.98  E-value: 8.60e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 1907068048  259 EWSQWSACSVTCGQGSQVRTRTCVS--PYGTHCSGPLRESRVCN 300
Cdd:pfam00090    2 PWSPWSPCSVTCGKGIQVRQRTCKSpfPGGEPCTGDDIETQACK 45
7tmB1_GHRHR2 cd15271
growth-hormone-releasing hormone receptor type 2, member of the class B family of ...
846-1126 1.43e-12

growth-hormone-releasing hormone receptor type 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor type 2 (GHRHR2) is found in non-mammalian vertebrates such as chicken and frog. It is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), vasoactive intestinal peptide, and mammalian growth hormone-releasing hormone. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Mammalian GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. Mammalian GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320399 [Multi-domain]  Cd Length: 267  Bit Score: 69.76  E-value: 1.43e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALITlAVVYAALWRYIRSERSIILINFCLSIISSNILILV-------GQTQTHnksiCTTTT-------AFL 911
Cdd:cd15271     10 VGYGTSLTSLIT-AVLIFCTFRKLHCTRNYIHINLFVSFILRALAVFIkdavlfaDESVDH----CTMSTvackaavTFF 84
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  912 HFFFLASFCWVLTEAW--QSYMAVTgKIRTRLIRKRFLCLGWGLPALVVATsvgFTRTKGYGTDHYCWLSLEGGLLYAFV 989
Cdd:cd15271     85 QFCVLANFFWLLVEGMylQTLLLLT-FTSDRKYFWWYILIGWGAPSVTVTV---WVLTRLQYDNRGCWDDLESRIWWIIK 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  990 GPAAAVVLVNMVIGIlvfNklVSRdgILDKKLKhragqmsEPHSGLTLKcakcgvvsttalsattaSNAMASLWSSCVVL 1069
Cdd:cd15271    161 TPILLSVFVNFLIFI---N--VIR--ILVQKLK-------SPDVGGNDT-----------------SHYMRLAKSTLLLI 209
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907068048 1070 PLLALTWMsaVLAMTDKRSILFQILF--AVFDSLQGFVIVMVHCILRREVQDAFRCRLR 1126
Cdd:cd15271    210 PLFGVHYV--VFAFFPEHVGVEARLYfeLVLGSFQGFIVALLYCFLNGEVQAEIKKRLG 266
7tmB1_NPR_B4_insect-like cd15260
insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of ...
845-1126 7.82e-12

insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Nilaparvata lugens (brown planthopper) and its closely related proteins from mollusks and annelid worms. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320388 [Multi-domain]  Cd Length: 267  Bit Score: 67.30  E-value: 7.82e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  845 IVGSGLSCLALITLAVVYAALwRYIRSERSIILINFCLSIISSNILILV--------GQTQTHNKSICTTTTAFLHFFFL 916
Cdd:cd15260      9 IGGYSVSLIALIISLAIFFSF-RSLRCTRITIHMNLFISFALNNLLWIVwyklvvdnPEVLLENPIWCQALHVLLQYFMV 87
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  917 ASFCWVLTEAWQSYMA-VTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHyCWLSlEGGLLYAFVGPAAAV 995
Cdd:cd15260     88 CNYFWMFCEGLYLHTVlVVAFISEKSLMRWFIAIGWGVPLVITAIYAGVRASLPDDTER-CWME-ESSYQWILIVPVVLS 165
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  996 VLVNMVIGILVFNKLVsrdgildKKLKhragQMSEPHSGLTLKcakcgvvstTALSATtasnamaslwssCVVLPLLALT 1075
Cdd:cd15260    166 LLINLIFLINIVRVLL-------TKLR----ATSPNPAPAGLR---------KAVRAT------------LILIPLLGLQ 213
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1907068048 1076 WMSAVL--AMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLR 1126
Cdd:cd15260    214 FLLIPFrpEPGAPLETIYQYVSALLTSLQGLCVAVLFCFCNGEVIAAIKRKWR 266
TSP_1 pfam00090
Thrombospondin type 1 domain;
313-360 1.34e-11

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 60.51  E-value: 1.34e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 1907068048  313 EWSPWSLCSFTCGRGQRTRTRSCTPPQYGGRPCEGPETHHKPCNIALC 360
Cdd:pfam00090    2 PWSPWSPCSVTCGKGIQVRQRTCKSPFPGGEPCTGDDIETQACKMDKC 49
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
421-471 1.57e-11

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 60.68  E-value: 1.57e-11
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 1907068048   421 WNQWGHWSGCSKSCDGGWERRMRTCQGAAVT--GQQCEGTGEEVRRCSEQRCP 471
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQngGGPCTGEDVETRACNEQPCP 53
TSP_1 pfam00090
Thrombospondin type 1 domain;
367-415 6.59e-11

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 58.58  E-value: 6.59e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 1907068048  367 QEWSSWSHCSVTCSNGTQQRSRQCTAAAHGGSECRGPWAESRECYNPEC 415
Cdd:pfam00090    1 SPWSPWSPCSVTCGKGIQVRQRTCKSPFPGGEPCTGDDIETQACKMDKC 49
HormR smart00008
Domain present in hormone receptors;
473-539 6.91e-11

Domain present in hormone receptors;


Pssm-ID: 214468  Cd Length: 70  Bit Score: 59.45  E-value: 6.91e-11
                            10        20        30        40        50        60        70
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907068048   473 PYEICPEDYLISMVWKRTPAGDLAFNQCPLNATG-----TTSRRCSLSLhgvaSWEQ--PSFARCISNEYRHLQ 539
Cdd:smart00008    1 TDLGCPATWDGIICWPQTPAGQLVEVPCPKYFSGfsyktGASRNCTENG----GWSPpfPNYSNCTSNDYEELK 70
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
368-415 1.55e-10

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 57.67  E-value: 1.55e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 1907068048  368 EWSSWSHCSVTCSNGTQQRSRQCTA-AAHGGSECrGPWAESRECYNPEC 415
Cdd:pfam19028    5 EWSEWSECSVTCGGGVQTRTRTVIVePQNGGRPC-PELLERRPCNLPPC 52
7tmB1_secretin cd15275
secretin receptor, member of the class B family of seven-transmembrane G protein-coupled ...
846-1118 5.54e-10

secretin receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Secretin receptor is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include vasoactive intestinal peptide (VIP), growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors, and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptor, which is expressed in the brain, pancreas, stomach, kidney, and liver.


Pssm-ID: 320403 [Multi-domain]  Cd Length: 271  Bit Score: 62.07  E-value: 5.54e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLScLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILV-----GQTQTHN-----KSICTTTTAFLHFFF 915
Cdd:cd15275     10 VGYSVS-LVSLAIALAILCSFRRLHCTRNYIHMQLFLSFILRAISIFIkdavlFSSEDDNhcdiyTVGCKVAMVFSNYCI 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  916 LASFCWVLTEAWQSYMAVTGKIRTRliRKR---FLCLGWGLPALVVatsVGFTRTKGYGTDHYCW-LSLEGGLLYAFVGP 991
Cdd:cd15275     89 MANYSWLLVEGLYLHSLLSISFFSE--RKHlwwYIALGWGSPLIFI---ISWAIARYLHENEGCWdTRRNAWIWWIIRGP 163
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  992 AAAVVLVNMV--IGILvfnklvsrdGILDKKLKHRAGQMSEphSGLTLKCAKcgvvsttalsattasnamaslwSSCVVL 1069
Cdd:cd15275    164 VILSIFVNFIlfLNIL---------RILMRKLRAPDMRGNE--FSQYKRLAK----------------------STLLLI 210
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907068048 1070 PLLALTWMSAVLAMTDKRSILFQI-LFA--VFDSLQGFVIVMVHCILRREVQ 1118
Cdd:cd15275    211 PLFGLHYILFAFFPEDVSSGTMEIwLFFelALGSFQGFVVAVLYCFLNGEVQ 262
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
257-300 5.81e-10

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 56.13  E-value: 5.81e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1907068048  257 VEEWSQWSACSVTCGQGSQVRTRTCVSPY---GTHCsGPLRESRVCN 300
Cdd:pfam19028    3 VSEWSEWSECSVTCGGGVQTRTRTVIVEPqngGRPC-PELLERRPCN 48
7tmB1_PTH-R_related cd15272
invertebrate parathyroid hormone-related receptors, member of the class B family of ...
840-1118 6.79e-10

invertebrate parathyroid hormone-related receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes parathyroid hormone (PTH)-related receptors found in invertebrates such as mollusks and annelid worms. The PTH family receptors are members of the B1 subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. The parathyroid hormone type 1 receptor (PTH1R) is found in all vertebrate species and is activated by two polypeptide ligands: parathyroid hormone (PTH), an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)- protein that in turn activates adenylyl cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple signaling pathways.


Pssm-ID: 320400 [Multi-domain]  Cd Length: 285  Bit Score: 62.02  E-value: 6.79e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  840 PSVTLI--VGSGLSCLALiTLAVVYAALWRYIRSERSIILINF--------CLSIISSNILI-LVGQTQTHNKSI----- 903
Cdd:cd15272      2 PSIRLMynIGYGLSLVSL-LIAVIIMLYFKKLHCPRNTIHINLfvsfilraVLSFIKENLLVqGVGFPGDVYYDSngvie 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  904 ---------CTTTTAFLHFFFLASFCWVLTEAWQSYMAV---TGKIRTRLirKRFLCLGWGLPALVVATSVGFTRTKgyg 971
Cdd:cd15272     81 fkdegshweCKLFFTMFNYILGANYMWIFVEGLYLHMLIfvaVFSENSRV--KWYILLGWLSPLLFVLPWVFVRATL--- 155
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  972 TDHYCW-LSLEGGLLYAFVGPAAAVVLVNMVIGI----LVFNKLVSRDGILDKKLKHRagqmsephsgltlKCAKcgvvS 1046
Cdd:cd15272    156 EDTLCWnTNTNKGYFWIIRGPIVISIAINFLFFInivrVLFTKLKASNTQESRPFRYR-------------KLAK----S 218
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907068048 1047 TTALSATTASNAMASLW-SSCVVLPLLALTWmsavlamtdkrsiLFQILFavFDSLQGFVIVMVHCILRREVQ 1118
Cdd:cd15272    219 TLVLIPLFGVHYMVFVVlPDSMSSDEAELVW-------------LYFEMF--FNSFQGFIVALLFCFLNGEVQ 276
7tmB2_GPR114 cd15443
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
845-1118 1.10e-09

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR114 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR97, GPR112, and GPR126. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320559 [Multi-domain]  Cd Length: 268  Bit Score: 60.92  E-value: 1.10e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  845 IVGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQ--TQTHNKSICTTTTAFLHFFFLASFCWV 922
Cdd:cd15443      9 IVGCSISAAASLLTILLHFFSRKQPKDSTTRIHMNLLGSLFLLNGSFLLSPplATSQSTWLCRAAAALLHYSLLCCLTWM 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  923 LTEAWQSYMaVTGKIRTRLIRKRF--LC-LGWGLPALVVATSVGFTR----------TKGYGTDHYCWLSLEGGLLYAFV 989
Cdd:cd15443     89 AIEGFHLYL-LLVKVYNIYIRRYVlkLCvLGWGLPALIVLLVLIFKReaygphtiptGTGYQNASMCWITSSKVHYVLVL 167
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  990 GPAAAVVLVNMVIGILVFNKLvsrdgildKKLKHRAGQMSEPhsgltlkcAKCGVVSTTALSAttasnamaslwsscvvl 1069
Cdd:cd15443    168 GYAGLTSLFNLVVLAWVVRML--------RRLRSRKQELGER--------ARRDWVTVLGLTC----------------- 214
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1070 pLLALTWMSAVLAMtdKRSILFQI-LFAVFDSLQGFVIVMVHCILRREVQ 1118
Cdd:cd15443    215 -LLGTTWALAFFSF--GVFLIPQLfLFTIINSLYGFFICLWYCTQRRRSD 261
7tmB2_GPR97 cd15442
orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G ...
846-1113 1.77e-09

orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR97 is an orphan receptor that has been classified into the group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR112, GPR114, and GPR126. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320558 [Multi-domain]  Cd Length: 277  Bit Score: 60.58  E-value: 1.77e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALITLAVVYAAL---WRYIRSERSI-ILINFCLSIISSNI--LILVGQTQTHNKSICTTTTAFLHFFFLASF 919
Cdd:cd15442     10 AGCGVSMVFLIFTIILYFFLrftYQKFKSEDAPkIHVNLSSSLLLLNLafLLNSGVSSRAHPGLCKALGGVTHYFLLCCF 89
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  920 CWVLTEAWQSYMAVTgKIRTRLIRKRF--LCL-GWGLPALVVATSvgfTRTKGYG-----------TDHYCWLSlEGGLL 985
Cdd:cd15442     90 TWMAIEAFHLYLLAI-KVFNTYIHHYFakLCLvGWGFPALVVTIT---GSINSYGaytimdmanrtTLHLCWIN-SKHLT 164
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  986 YAFV---GPAAAVVLVNMVIGILVFNKL--VSRDGILDKKLKHRAGqmsephsGLTLkcakcgvvsttalsattasnama 1060
Cdd:cd15442    165 VHYItvcGYFGLTFLFNTVVLGLVAWKIfhLQSATAGKEKCQAWKG-------GLTV----------------------- 214
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1907068048 1061 sLWSSCvvlpLLALTWMSAVLAMTdKRSILFQILFAVFDSLQGFVIVMVHCIL 1113
Cdd:cd15442    215 -LGLSC----LLGVTWGLAFFTYG-SMSVPTVYIFALLNSLQGLFIFIWFVIL 261
7tmB1_GLP2R cd15266
glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G ...
845-1124 1.99e-09

glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon-like peptide-2 receptor (GLP2R) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon receptor (GCGR) and GLP1R. GLP2R is activated by glucagon-like peptide 2, which is derived from the large proglucagon precursor. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. GLP2R belongs to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320394 [Multi-domain]  Cd Length: 280  Bit Score: 60.53  E-value: 1.99e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  845 IVGSGLScLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNK--------------------SIC 904
Cdd:cd15266      9 TIGYSLS-LISLSLALLILLLLRKLHCTRNYIHMNLFASFILRALAVLIKDIVLYSTyskrpddetgwisylseessTSC 87
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  905 TTTTAFLHFFFLASFCWVLTEAWQSY-MAVTGKIRTRLIRKRFLCLGWGLPALVVatsVGFTRTKGYGTDHYCWLSLEG- 982
Cdd:cd15266     88 RVAQVFMHYFVGANYFWLLVEGLYLHtLLVTAVLSERRLLKKYMLIGWGTPVLFV---VPWGVAKILLENTGCWGRNENm 164
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  983 GLLYAFVGPAAAVVLVNMVIGILVFNKLVSrdgildkKLKhrAGQMSepHSGLTLKCAKcgvvsttalsattasnamasl 1062
Cdd:cd15266    165 GIWWIIRGPILLCITVNFYIFLKILKLLLS-------KLK--AQQMR--FTDYKYRLAR--------------------- 212
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907068048 1063 wSSCVVLPLLALTWMsAVLAMTDKRSILFQILFAVF-----DSLQGFVIVMVHCILRREVQDAFRCR 1124
Cdd:cd15266    213 -STLVLIPLLGIHEV-VFSFITDEQVEGFSRHIRLFiqltlSSFQGFLVAVLYCFANGEVKAELKKR 277
7tmB2_GPR123 cd16000
G protein-coupled receptor 123, member of the class B2 family of seven-transmembrane G ...
851-1117 3.27e-09

G protein-coupled receptor 123, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR123 is an orphan receptor that has been classified as that belongs to the group III of adhesion GPCRs, and also includes orphan receptors GPR124 and GPR125. GPR123 is predominantly expressed in the CNS including thalamus, brain stem and regions containing large pyramidal cells, yet its biological function remains to be determined. Adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320666 [Multi-domain]  Cd Length: 275  Bit Score: 59.58  E-value: 3.27e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  851 SCLALITLAVvYAALWRYIRSERSI--------ILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWV 922
Cdd:cd16000     10 ACTAVMLLCL-FASIITYIVHHSTIrisrkgwhMLLNFCFHTALTFAVFAGGINRTKYPIICQAVGIVLHYSTLSTMLWI 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  923 LTEAWQSYMAVTGKIRT----------RLIRKRFLCLGWGLPALVVATSVGfTRTKGYGTDH----YCWLSLEGGlLYAF 988
Cdd:cd16000     89 GVTARNIYKQVTKKPHLcqdtdqppypKQPLLRFYLVSGGVPFIICGITAA-TNINNYGTEDedtpYCWMAWEPS-LGAF 166
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  989 VGPAAAVVLVNMVIGILVFNKLvsrdgildKKLKHRAGQMSEPHSgltlkcakcgvvsttalsattasnAMASLWSSCVV 1068
Cdd:cd16000    167 YGPVAFIVLVTCIYFLCTYVQL--------RRHPERKYELKNEHS------------------------FKAQLRAAAFT 214
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1907068048 1069 LPLLALTWMSAVLAMTDKR--SILFQILFAVFDSLQGFVIVMVHCILRREV 1117
Cdd:cd16000    215 LFLFTATWAFGALAVSQGHflDMIFSCLYGAFCVTLGLFILIHHCAKRDDV 265
7tmB1_Secretin_R-like cd15930
secretin receptor-like group of hormone receptors, member of the class B family of ...
846-1118 4.30e-09

secretin receptor-like group of hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group represents G protein-coupled receptors for structurally similar peptide hormones that include secretin, growth-hormone-releasing hormone (GHRH), pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptors, which are expressed in the brain, pancreas, stomach, kidney, and liver. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. All B1 subfamily GPCRs are able to increase intracellular cAMP levels by coupling to adenylate cyclase via a stimulatory Gs protein. However, depending on its cellular location, some members of subfamily B1 are also capable of coupling to additional G proteins such as G(i/o) and/or G(q) proteins, thereby leading to activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320596 [Multi-domain]  Cd Length: 268  Bit Score: 59.37  E-value: 4.30e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALITlAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQT---QTHNKSICTTTTA-------FLHFFF 915
Cdd:cd15930     10 VGYSLSLTSLTT-AMIILCLFRKLHCTRNYIHMNLFVSFILRAIAVFIKDAvlfSSEDVDHCFVSTVgckasmvFFQYCV 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  916 LASFCWVLTEAWqsYMAVTGKIRTRLIRKRF---LCLGWGLPALVVATsvgFTRTKGYGTDHYCW-LSLEGGLLYAFVGP 991
Cdd:cd15930     89 MANFFWLLVEGL--YLHTLLVISFFSERRYFwwyVLIGWGAPTVFVTV---WIVARLYFEDTGCWdINDESPYWWIIKGP 163
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  992 AAAVVLVNMVIGILVFNklvsrdgILDKKLkhRAGQMSEPHSGLTLKCAKcgvvsttalsattasnamaslwSSCVVLPL 1071
Cdd:cd15930    164 ILISILVNFVLFINIIR-------ILLQKL--RSPDIGGNESSQYKRLAR----------------------STLLLIPL 212
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*....
gi 1907068048 1072 LALTWMsaVLAMT-DKRSILFQILFA-VFDSLQGFVIVMVHCILRREVQ 1118
Cdd:cd15930    213 FGIHYI--VFAFFpENISLGIRLYFElCLGSFQGFVVAVLYCFLNGEVQ 259
7tmB1_GlucagonR-like cd15929
glucagon receptor-like subfamily, member of the class B family of seven-transmembrane G ...
846-1122 9.38e-09

glucagon receptor-like subfamily, member of the class B family of seven-transmembrane G protein-coupled receptors; This group represents the glucagon receptor family of G protein-coupled receptors, which includes glucagon receptor (GCGR), glucagon-like peptide-1 receptor (GLP1R), GLP2R, and closely related receptors. These receptors are activated by the members of the glucagon (GCG) peptide family including GCG, glucagon-like peptide 1 (GLP1), and GLP2, which are derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 341353 [Multi-domain]  Cd Length: 279  Bit Score: 58.21  E-value: 9.38e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALItLAVVYAALWRYIRSERSIILINFCLSIISSNILILV----------GQTQTHNKSI---------CTT 906
Cdd:cd15929     10 VGYSLSLAALV-LALAILLGLRKLHCTRNYIHANLFASFILRALSVLVkdallprrysQKGDQDLWSTllsnqaslgCRV 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  907 TTAFLHFFFLASFCWVLTEAWQSY--MAVTGKIRTRLIRkRFLCLGWGLPALVVatsVGFTRTKGYGTDHYCWLSLEG-G 983
Cdd:cd15929     89 AQVLMQYCVAANYYWLLVEGLYLHtlLVLAVFSERSIFR-LYLLLGWGAPVLFV---VPWGIVKYLYENTGCWTRNDNmA 164
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  984 LLYAFVGPAAAVVLVNMVIGILVFNKLVSrdgildkklKHRAGQMSepHSGLTLKCAKcgvvsttalsattasnamaslw 1063
Cdd:cd15929    165 YWWIIRLPILLAILINFFIFVRILKILVS---------KLRANQMC--KTDYKFRLAK---------------------- 211
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907068048 1064 SSCVVLPLLALTWMSAVLAMTDK-----RSI-LFQILFavFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15929    212 STLTLIPLLGVHEVVFAFVTDEQargtlRFIkLFFELF--LSSFQGLLVAVLYCFANKEVQSELR 274
7tmB1_GCGR cd15267
glucagon receptor, member of the class B family of seven-transmembrane G protein-coupled ...
842-1124 2.92e-08

glucagon receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon receptor (GCGR) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon-like peptide-1 receptor (GLP1R) and GLP2R. GCGR is activated by glucagon, which is derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR belongs to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320395 [Multi-domain]  Cd Length: 281  Bit Score: 56.75  E-value: 2.92e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  842 VTLIVGSGLSCLALItLAVVYAALWRYIRSERSIILINFCLSII--SSNILILVGQTQTHNKSI---------------- 903
Cdd:cd15267      8 VMYTVGYSLSLGALL-LALAILGGFSKLHCMRNAIHMNLFASFIlkASSVLVIDGLLRTRYSQKieddlsstwlsdeava 86
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  904 -CTTTTAFLHFFFLASFCWVLTEAWQSY-MAVTGKIRTRLIRKRFLCLGWGLPALVVatsVGFTRTKGYGTDHYCW-LSL 980
Cdd:cd15267     87 gCRVAAVFMQYGIVANYCWLLVEGIYLHnLLVLAVFPERSYFSLYLCIGWGAPALFV---VPWVVVKCLYENVQCWtSND 163
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  981 EGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSrdgildkklKHRAGQMSepHSGLTLKCAKcgvvsttalsattasnama 1060
Cdd:cd15267    164 NMGFWWILRFPVFLAILINFFIFVRIIQILVS---------KLRARQMH--YTDYKFRLAK------------------- 213
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907068048 1061 slwSSCVVLPLLALTWMsAVLAMTDKRSI-------LFQILFavFDSLQGFVIVMVHCILRREVQDAFRCR 1124
Cdd:cd15267    214 ---STLTLIPLLGIHEV-VFAFVTDEHAQgtlrsakLFFDLF--LSSFQGLLVAVLYCFLNKEVQSELRRR 278
7tmB1_GHRHR cd15270
growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane ...
839-1124 1.69e-07

growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor (GHRHR) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320398 [Multi-domain]  Cd Length: 268  Bit Score: 54.42  E-value: 1.69e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  839 TPSVTLIVGSGLSCLALItLAVVYAALWRYIRSERSIILINFCLSIISSNILILV-------GQTQTH---NKSICTTTT 908
Cdd:cd15270      3 TVKIIYTVGYSISIVSLC-VAVAILVAFRRLHCPRNYIHIQLFFTFILKAIAVFIkdaalfqEDDTDHcsmSTVLCKVSV 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  909 AFLHFFFLASFCWVLTEA-WQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGftrTKGYGTDHYCW-LSLEGGLLY 986
Cdd:cd15270     82 VFCHYCVMTNFFWLLVEAvYLNCLLASSFPRGKRYFWWLVLLGWGLPTLCTGTWIL---CKLYFEDTECWdINNDSPYWW 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  987 AFVGPAAAVVLVNMVIGILVFNklvsrdgILDKKLKHRAGQMsephsgltlkcakcgvvsttalsattasNAMASLW--- 1063
Cdd:cd15270    159 IIKGPIVISVGVNFLLFLNIIR-------ILLKKLDPRQINF----------------------------NNSAQYRrls 203
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907068048 1064 -SSCVVLPLLALTWMSAVL----AMTDKRSILFQILfavfDSLQGFVIVMVHCILRREVQDAFRCR 1124
Cdd:cd15270    204 kSTLLLIPLFGTHYIIFNFlpdyAGLGIRLYLELCL----GSFQGFIVAVLYCFLNQEVQTEISRK 265
TSP_1 pfam00090
Thrombospondin type 1 domain;
424-470 1.04e-06

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 47.03  E-value: 1.04e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1907068048  424 WGHWSGCSKSCDGGWERRMRTCQGAAVTGQQCEGTGEEVRRCSEQRC 470
Cdd:pfam00090    3 WSPWSPCSVTCGKGIQVRQRTCKSPFPGGEPCTGDDIETQACKMDKC 49
7tmB1_PDFR cd15261
The pigment dispersing factor receptor, member of the class B seven-transmembrane G ...
845-1127 1.05e-06

The pigment dispersing factor receptor, member of the class B seven-transmembrane G protein-coupled receptors; The pigment dispersing factor receptor (PDFR) is a G protein-coupled receptor that binds the circadian clock neuropeptide PDF, a functional ortholog of the mammalian vasoactive intestinal peptide (VIP), on the pacemaker neurons. The PDFR is implicated in regulating flight circuit development and in modulating acute flight In Drosophila melanogaster. The PDFR activation stimulates adenylate cyclase, thereby increasing cAMP levels in many different pacemakers, and the receptor signaling has been shown to regulate behavioral circadian rhythms and geotaxis in Drosophila. The PDFR belongs to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. . These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. They play key roles in hormone homeostasis in mammals and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression).


Pssm-ID: 320389 [Multi-domain]  Cd Length: 282  Bit Score: 51.98  E-value: 1.05e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  845 IVGSGLSCLALITLAVVYAaLWRYIRSERSIILINFCLSIISSNILILV--------GQTQTHNKS-------------I 903
Cdd:cd15261      9 IVGLCLSLVSLIISLFIFS-YFRTLRNHRTRIHKNLFLAILLQVIIRLVlyidqaitRSRGSHTNAattegrtinstpiL 87
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  904 CTTTTAFLHFFFLASFCWVLTEA-WQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDhyCWLSleg 982
Cdd:cd15261     88 CEGFYVLLEYAKTVMFMWMFIEGlYLHNIIVVSVFSGKPNYLFYYILGWGIPIVHTSAWAIVTLIKMKVNR--CWFG--- 162
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  983 gllYAFV-------GPAAAVVLVNMVIGILVFNKLVSrdgildkKLKhragqmsEPHSGLTLKCAKcgvvsttalsatTA 1055
Cdd:cd15261    163 ---YYLTpyywileGPRLAVILINLFFLLNIIRVLVS-------KLR-------ESHSREIEQVRK------------AV 213
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907068048 1056 SNAMaslwsscVVLPLLALTwmsAVLAMTDKRSILFQILFAVFD-------SLQGFVIVMVHCILRREVQDAFRCRLRN 1127
Cdd:cd15261    214 KAAI-------VLLPLLGIT---NILQMIPPPLTSVIVGFAVWSysthfltSFQGFFVALIYCFLNGEVKNVLKKFWRR 282
7tmB1_PTH1R cd15984
parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G ...
846-1118 1.44e-06

parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320650 [Multi-domain]  Cd Length: 290  Bit Score: 51.87  E-value: 1.44e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLScLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQ---------------TQTHNKSI------- 903
Cdd:cd15984     10 VGYSIS-LGSLTVAVLILGYFRRLHCTRNYIHMHLFLSFMLRAVSIFVKDavlysgsaleemeriTEEDLKSIteappad 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  904 ------CTTTTAFLHFFFLASFCWVLTEA-WQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATsvgFTRTKGYGTDHYC 976
Cdd:cd15984     89 kaqfvgCKVAVTFFLYFLATNYYWILVEGlYLHSLIFMAFFSEKKYLWGFTLFGWGLPAVFVTI---WASVRATLADTGC 165
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  977 WLSLEGGLLYAFVGPAAAVVLVNMVIGILVFNklvsrdgILDKKLKHragqmsephsgltlkcakcgvvsTTALSATTAS 1056
Cdd:cd15984    166 WDLSAGNLKWIIQVPILAAIVVNFILFINIVR-------VLATKLRE-----------------------TNAGRCDTRQ 215
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907068048 1057 NAMASLWSSCVVLPLLALTWMsAVLAM--TDKRSILFQILF---AVFDSLQGFVIVMVHCILRREVQ 1118
Cdd:cd15984    216 QYRKLLKSTLVLMPLFGVHYI-VFMAMpyTEVSGILWQVQMhyeMLFNSFQGFFVAIIYCFCNGEVQ 281
7tmB1_GlucagonR-like_1 cd15985
uncharacterized group of glucagon receptor-like proteins, member of the class B family of ...
846-1126 1.52e-06

uncharacterized group of glucagon receptor-like proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This group consists of uncharacterized proteins with similarity to members of the glucagon receptor family of G protein-coupled receptors, which include glucagon receptor (GCGR), and glucagon-like peptide-1 receptor (GLP1R), and GLP2R. The glucagon receptors are activated by the members of the glucagon (GCG) peptide family including GCG, glucagon-like peptide 1 (GLP1), and GLP2, which are derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320651 [Multi-domain]  Cd Length: 280  Bit Score: 51.47  E-value: 1.52e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALITlAVVYAALWRYIRSERSIILINFCLSIISSNILILV-------------------GQTQTHNKSI-CT 905
Cdd:cd15985     10 VGYTLSLLTLVS-ALLILTSIRKLHCTRNYIHANLFASFILRAVSVIVkdtllerrwgreimrvadwGELLSHKAAIgCR 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  906 TTTAFLHFFFLASFCWVLTEAWQSYMAVTGKIRTRLIRKR-FLCLGWGLPALVVatsVGFTRTKGYGTDHYCWlSLEGGL 984
Cdd:cd15985     89 MAQVVMQYCILANHYWFFVEAVYLYKLLIGAVFSEKNYYLlYLYLGWGTPVLFV---VPWMLAKYLKENKECW-ALNENM 164
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  985 LYAFV--GPAAAVVLVNMVIGILVFNKLVSrdgildkklKHRAGQMSEPHSGLTLkcakcgvvsttalsattasnAMASL 1062
Cdd:cd15985    165 AYWWIirIPILLASLINLLIFMRILKVILS---------KLRANQKGYADYKLRL--------------------AKATL 215
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907068048 1063 wsscVVLPLLALTWMSAVLAmTDKRS--IL--FQILFAVF-DSLQGFVIVMVHCILRREVQDAFRCRLR 1126
Cdd:cd15985    216 ----TLIPLFGIHEVVFIFA-TDEQTtgILryIKVFFTLFlNSFQGFLVAVLYCFANKEVKSELLKKWR 279
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
425-470 1.60e-06

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 46.68  E-value: 1.60e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907068048  425 GHWSGCSKSCDGGWERRMRTCQ----GAAVTGQQCEGTG--EEVRRCSEQRC 470
Cdd:pfam19030    4 GPWGECSVTCGGGVQTRLVQCVqkggGSIVPDSECSAQKkpPETQSCNLKPC 55
7tmB1_calcitonin_R cd15274
calcitonin receptor, member of the class B family of seven-transmembrane G protein-coupled ...
845-1122 1.83e-06

calcitonin receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes G protein-coupled receptors for calcitonin (CT) and calcitonin gene-related peptides (CGRPs). Calcitonin, a 32-amino acid peptide hormone, is involved in calcium metabolism in many mammalian species and acts to reduce blood calcium levels and directly inhibits bone resorption by acting on osteoclast. Thus, CT acts as an antagonist to parathyroid hormone and is commonly used in the treatment of bone disorders. The CT receptor is predominantly found in osteoclasts, kidney, and brain, and is primarily coupled to stimulatory G(s) protein, which leads to activation of adenylate cyclase, thereby increasing cAMP production. CGRP, a member of the calcitonin family of peptides, is a potent vasodilator and may contribute to migraine. It is expressed in the peripheral and central nervous system and exists in two forms in humans (alpha-CGRP and beta-CGRP). CGRP meditates its physiological effects through calcitonin receptor-like receptor (CRLR) and receptor activity-modifying protein 1 (RAMP1), a single transmembrane domain protein. Thus, the CRLR/RAMP1 complex serves as a functional CGRP receptor. On the other hand, the CRLR/RAMP2 and CRLR/RAMP3 complexes function as adrenomedullin-specific receptors. The CT and CGRP receptors belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide.


Pssm-ID: 341343 [Multi-domain]  Cd Length: 274  Bit Score: 51.32  E-value: 1.83e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  845 IVGSGLSCLAL-ITLAVVYaaLWRYIRSERSIILINFCLSIISSNILILV--------GQTQTHNKSICTTTTAFLHFFF 915
Cdd:cd15274      9 IVGHSLSIATLlISLGIFF--FFRSLSCQRVTLHKNLFLSYILNSIIIIIhlvavvpnGELVARNPVSCKILHFIHQYMM 86
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  916 LASFCWVLTEAWQSYMAVTGKIRTRLIRKR-FLCLGWGLPaLVVATSVGFTRTKGYgtDHYCWLSLEGGLLYAFVGPAAA 994
Cdd:cd15274     87 GCNYFWMLCEGIYLHTLIVVAVFAEKQRLMwYYLLGWGFP-LIPTTIHAITRAVYY--NDNCWLSSETHLLYIIHGPIMA 163
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  995 VVLVNMVIGILVFNKLVSrdgildkKLKhragQMSEPHSGLTLKcakcgvvsttALSATTasnamaslwsscVVLPLLAL 1074
Cdd:cd15274    164 ALVVNFFFLLNIVRVLVT-------KLR----ETHEAESHMYLK----------AVKATL------------ILVPLLGI 210
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1907068048 1075 TWMsaVLAMTDKRSILFQILFAVFDSL---QGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15274    211 QFV--LFPWRPSGKILGKIYDYVMHSLihfQGFFVATIFCFCNGEVQATLK 259
7tmB1_VIP-R1 cd15269
vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of ...
838-1126 4.47e-06

vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 1 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320397 [Multi-domain]  Cd Length: 268  Bit Score: 49.85  E-value: 4.47e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  838 GTPSVTLIVGSGLSCLALiTLAVVYAALWRYIRSERSIILINFCLSIISSNILILV--------GQTQ-THNKSI-CTTT 907
Cdd:cd15269      2 GTVKTGYTIGHSLSLISL-TAAMIILCLFRKLHCTRNYIHMHLFMSFILRAIAVFIkdavlfesGEEDhCSVASVgCKAA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  908 TAFLHFFFLASFCWVLTEAWqsYMAVTGKIRTRLIRKRF---LCLGWGLPALVVatsVGFTRTKGYGTDHYCWLSLEGGL 984
Cdd:cd15269     81 MVFFQYCIMANFFWLLVEGL--YLHTLLAVSFFSERKYFwwyILIGWGAPSVFI---TAWSVARIYFEDVGCWDTIIESL 155
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  985 LYAFV-GPAAAVVLVNMVIGILVFNKLVSRdgildkklkhragqmsephsgltLKCAKCGVVSTTALSATTAsnamaslw 1063
Cdd:cd15269    156 LWWIIkTPILVSILVNFILFICIIRILVQK-----------------------LHSPDIGRNESSQYSRLAK-------- 204
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907068048 1064 SSCVVLPLLALTWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLR 1126
Cdd:cd15269    205 STLLLIPLFGIHYIMFAFFPDNFKAEVKLVFELILGSFQGFVVAVLYCFLNGEVQAELKRKWR 267
7tmB1_VIP-R2 cd15986
vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of ...
846-1127 8.37e-06

vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 2 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320652 [Multi-domain]  Cd Length: 269  Bit Score: 49.03  E-value: 8.37e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALITLAVVYAaLWRYIRSERSIILINFCLSIISSNILILV---------GQTQTHNKSI---CTTTTAFLHF 913
Cdd:cd15986     10 LGHSVSLIALTTGSTILC-LFRKLHCTRNYIHLNLFFSFILRAISVLVkddilysssNTEHCTVPPSligCKVSLVILQY 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  914 FFLASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATsvgFTRTKGYGTDHYCWLSLEGGLLYAFVG-PA 992
Cdd:cd15986     89 CIMANFYWLLVEGLYLHTLLVVIFSENRHFIVYLLIGWGIPTVFIIA---WIVARIYLEDTGCWDTNDHSVPWWVIRiPI 165
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  993 AAVVLVNMVIGILVFNKLVSRdgildkklkhragqmsephsgltLKCAKCGvvsttalsATTASNAMASLWSSCVVLPLL 1072
Cdd:cd15986    166 IISIILNFILFISIIRILLQK-----------------------LRSPDVG--------GNDQSQYKRLAKSTLLLIPLF 214
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907068048 1073 ALTWMSAVLaMTDKRSILFQILFAV-FDSLQGFVIVMVHCILRREVQDAFRCRLRN 1127
Cdd:cd15986    215 GVHYIVFVY-FPDSSSSNYQIFFELcLGSFQGLVVAILYCFLNSEVQGELKRKWRS 269
7tmB1_PACAP-R1 cd15987
pituitary adenylate cyclase-activating polypeptide type 1 receptor, member of the class B ...
846-1127 8.72e-06

pituitary adenylate cyclase-activating polypeptide type 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Pituitary adenylate cyclase-activating polypeptide type 1 receptor (PACAP-R1) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. PACAP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level.


Pssm-ID: 320653 [Multi-domain]  Cd Length: 268  Bit Score: 49.20  E-value: 8.72e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  846 VGSGLSCLALITlAVVYAALWRYIRSERSIILINFCLSIISSNILILVG-------QTQTH---NKSICTTTTAFLHFFF 915
Cdd:cd15987     10 VGYSTSLVSLTT-AMVILCRFRKLHCTRNFIHMNLFVSFILRAISVFIKdgvlyaeQDSDHcfvSTVECKAVMVFFHYCV 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  916 LASFCWVLTEAWQSYmavTGKIRTRLIRKRFL----CLGWGLPALVVATsvgFTRTKGYGTDHYCW-LSLEGGLLYAFVG 990
Cdd:cd15987     89 MSNYFWLFIEGLYLF---TLLVETFFPERRYFywytIIGWGTPTICVTV---WAVLRLHFDDTGCWdMNDNTALWWVIKG 162
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  991 PAAAVVLVNMV--IGILVfnklvsrdgILDKKLKhrAGQMSEPHSGLTLKCAKcgvvsttalsattasnamaslwSSCVV 1068
Cdd:cd15987    163 PVVGSIMINFVlfIGIII---------ILVQKLQ--SPDIGGNESSIYLRLAR----------------------STLLL 209
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907068048 1069 LPLLALTWMSAVLA---MTDKRSILFQILFAVFdslQGFVIVMVHCILRREVQDAFRCRLRN 1127
Cdd:cd15987    210 IPLFGIHYTVFAFSpenVSKRERLVFELGLGSF---QGFVVAVLYCFLNGEVQSEIKRKWRS 268
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
424-470 1.23e-05

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 43.81  E-value: 1.23e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 1907068048  424 WGHWSGCSKSCDGGWERRMRT-CQGAAVTGQQCeGTGEEVRRCSEQRC 470
Cdd:pfam19028    6 WSEWSECSVTCGGGVQTRTRTvIVEPQNGGRPC-PELLERRPCNLPPC 52
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
263-301 2.05e-05

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 43.21  E-value: 2.05e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1907068048  263 WSACSVTCGQGSQVRTRTCVSPYGTH------CSGPLR--ESRVCNN 301
Cdd:pfam19030    6 WGECSVTCGGGVQTRLVQCVQKGGGSivpdseCSAQKKppETQSCNL 52
HRM pfam02793
Hormone receptor domain; This extracellular domain contains four conserved cysteines that ...
474-533 2.69e-05

Hormone receptor domain; This extracellular domain contains four conserved cysteines that probably for disulphide bridges. The domain is found in a variety of hormone receptors. It may be a ligand binding domain.


Pssm-ID: 397086  Cd Length: 64  Bit Score: 43.13  E-value: 2.69e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907068048  474 YEICPEDYLISMVWKRTPAGDLAFNQCP-----LNATGTTSRRCslSLHGvaSWEQPS---FARCISN 533
Cdd:pfam02793    1 GLGCPRTWDGILCWPRTPAGETVEVPCPdyfsgFDPRGNASRNC--TEDG--TWSEHPpsnYSNCTSN 64
7tmB2_GPR124 cd15998
G protein-coupled receptor 124, member of the class B2 family of seven-transmembrane G ...
852-1122 8.16e-05

G protein-coupled receptor 124, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR124 is an orphan receptor that has been classified as that belongs to the group III of adhesion GPCRs, which also includes orphan GPR123 and GPR125. GPR124, also known as tumor endothelial marker 5 (TEM5), is highly expressed in tumor vessels and in the vasculature of the developing embryo. GPR124 is essentially required for proper angiogenic sprouting into neural tissue, CNS-specific vascularization, and formation of the blood-brain barrier. GPR124 interacts with the PDZ domain of DLG1 (discs large homolog 1) through its PDZ-binding motif. Recently, studies of double-knockout mice showed that GPR124 functions as a co-activator of Wnt7a/Wnt7b-dependent beta-catenin signaling in brain endothelium. Moreover, WNT7-stimulated beta-catenin signaling is regulated by GPR124's intracellular PDZ binding motif and leucine-rich repeats (LRR) in its N-terminal extracellular domain. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320664 [Multi-domain]  Cd Length: 268  Bit Score: 46.10  E-value: 8.16e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  852 CLALITLAVvYAALWRYIRSERSI--------ILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVL 923
Cdd:cd15998     11 CTALLLLCL-FSTIITYILNHSSIhvsrkgwhMLLNLCFHIAMTSAVFAGGITLTNYQMVCQAVGITLHYSSLSTLLWMG 89
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  924 TEA--------WQSYMAVTGKIRTRLIRK--RFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGGlLYAFVGPAA 993
Cdd:cd15998     90 VKArvlhkeltWRAPPPQEGDPALPTPRPmlRFYLIAGGIPLIICGITAAVNIHNYRDHSPYCWLVWRPS-LGAFYIPVA 168
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  994 AVVLVNMVIGILvfnklvsrdgildkklkhragqmsephSGLTLKCAKCGVVSTTALSattasnamASLWSSCVVLPLLA 1073
Cdd:cd15998    169 LILLVTWIYFLC---------------------------AGLHLRGPSADGDSVYSPG--------VQLGALVTTHFLYL 213
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1907068048 1074 LTWMSAVLAMTDK--RSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15998    214 AMWACGALAVSQRwlPRVVCSCLYGVAASALGLFVFTHHCARRRDVRASWR 264
PTZ00087 PTZ00087
thrombosponding-related protein; Provisional
259-299 1.28e-04

thrombosponding-related protein; Provisional


Pssm-ID: 185438  Cd Length: 340  Bit Score: 46.09  E-value: 1.28e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 1907068048  259 EWSQWSACSVTCGQ--GSQVRTRTCVSPYGTHCSGPLRESRVC 299
Cdd:PTZ00087   235 EWGEWSNCSMECDHpdNVQIRERKCAHPSGDCFKGDLKETRPC 277
PTZ00441 PTZ00441
sporozoite surface protein 2 (SSP2); Provisional
296-363 1.32e-04

sporozoite surface protein 2 (SSP2); Provisional


Pssm-ID: 240420 [Multi-domain]  Cd Length: 576  Bit Score: 46.50  E-value: 1.32e-04
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907068048  296 SRVC---NNTALCpvhGVWEEWSPwslCSFTCGRGQRTRTRSCTPpqyggrpcEGPETH-HKPCNIALCPVD 363
Cdd:PTZ00441   228 AKVCtevERTASC---GPWDEWTP---CSVTCGKGTHSRSRPILH--------EGCTTHmVEECEEEECPVE 285
7tmB1_PTHR cd15265
parathyroid hormone receptors, member of the class B family of seven-transmembrane G ...
904-1122 1.78e-04

parathyroid hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to a G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39), but not by PTHrP. PTH also strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs, suggesting that TIP-39 is a natural ligand for PTH2R. On the other hand, PTH3R binds and responds to both PTH and PTHrP, but not the TIP-39. Moreover, the PTH3R is more closely related to the PTH1R than PTH2R. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. The PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320393 [Multi-domain]  Cd Length: 289  Bit Score: 45.06  E-value: 1.78e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  904 CTTTTAFLHFFFLASFCWVLTEAW--QSYMAVTGKIRTRLIRkRFLCLGWGLPALVVATsvgFTRTKGYGTDHYCWLSLE 981
Cdd:cd15265     95 CKVAVTLFLYFLATNYYWILVEGLylHSLIFMAFFSDKKYLW-GFTLIGWGFPAVFVIP---WASVRATLADTRCWDLSA 170
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  982 GGLLYAFVGPAAAVVLVNMvigILVFNKLvsrdGILDKKLKhRAGQMSEPHSGLTLKCAKcgvvsttalsattasnamas 1061
Cdd:cd15265    171 GNYKWIYQVPILAAIVVNF---ILFLNIV----RVLATKLR-ETNAGRCDTRQQYRKLAK-------------------- 222
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907068048 1062 lwSSCVVLPLLALTWMSAVLAMTDKRSILFQI-----LFavFDSLQGFVIVMVHCILRREVQDAFR 1122
Cdd:cd15265    223 --STLVLIPLFGVHYIVFMGMPYTEVGLLWQIrmhyeLF--FNSFQGFFVAIIYCFCNGEVQAEIK 284
7tmB1_NPR_B7_insect-like cd15273
insect neuropeptide receptor subgroup B7 and related proteins, member of the class B family of ...
897-1118 2.39e-04

insect neuropeptide receptor subgroup B7 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Nilaparvata lugens (brown planthopper) and its closely related proteins from invertebrates. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320401 [Multi-domain]  Cd Length: 285  Bit Score: 44.67  E-value: 2.39e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  897 QTHNKSICTTTTAFLHFFFLASFCWVLTEawqsymavtGKIRTRLIRkRFLC-----------LGWGLPALVVATSVgFT 965
Cdd:cd15273     84 NIGSNWVCKAITSLWQYFIIANYSWILME---------GLYLHNLIF-LALFsdenniilyilLGWGLPLIFVVPWI-VA 152
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  966 RTKgyGTDHYCWLSLEGGLLYAFV-GPAAAVVLVN----MVIGILVFNKLvsRDGILDKKLKHRagqmsephsgltlKCA 1040
Cdd:cd15273    153 RIL--FENSLCWTTNSNLLNFLIIrIPIMISVLINfilfLNIVRVLLVKL--RSSVNEDSRRYK-------------KWA 215
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048 1041 KcgvvsttalsattasnamaslwSSCVVLPLLALTW-MSAVLAMTDKRSILFQI--LF--AVFDSLQGFVIVMVHCILRR 1115
Cdd:cd15273    216 K----------------------STLVLVPLFGVHYtIFLILSYLDDTNEAVELiwLFcdQLFASFQGFFVALLYCFLNG 273

                   ...
gi 1907068048 1116 EVQ 1118
Cdd:cd15273    274 EVR 276
7tmF_Frizzled_SMO cd13951
class F frizzled/smoothened family, member of the 7-transmembrane G protein-coupled receptor ...
852-955 4.33e-04

class F frizzled/smoothened family, member of the 7-transmembrane G protein-coupled receptor superfamily; The class F G protein-coupled receptors includes the frizzled (FZD) family of seven-transmembrane proteins consisting of 10 isoforms (FZD1-10) in mammals. The FZDs are activated by the wingless/int-1 (WNT) family of secreted lipoglycoproteins and preferentially couple to stimulatory G proteins of the Gs family, which activate adenylate cyclase, but can also couple to G proteins of the Gi/Gq families. In the WNT/beta-catenin signaling pathway, the WNT ligand binds to FZD and a lipoprotein receptor-related protein (LRP) co-receptor. This leads to the stabilization and translocation of beta-catenin to the nucleus, where it induces the activation of TCF/LEF family transcription factors. The conserved cytoplasmic motif of FZD, Lys-Thr-X-X-X-Trp, is required for activation of the WNT/beta-catenin pathway, and for membrane localization and phosphorylation of Dsh (dishevelled) protein, a key component of the WNT pathway that relays the WNT signals from the activated receptor to downstream effector proteins. Also included in the class F family is the closely related smoothened (SMO), which is a transmembrane G protein-coupled receptor that acts as the transducer of the hedgehog (HH) signaling pathway. SMO is activated by the hedgehog (HH) family of proteins acting on the 12-transmembrane domain receptor patched (PTCH), which constitutively inhibits SMO. Thus, in the absence of HH proteins, PTCH inhibits SMO signaling. On the other hand, binding of HH to the PTCH receptor activates its internalization and degradation, thereby releasing the PTCH inhibition of SMO. This allows SMO to trigger intracellular signaling and the subsequent activation of the Gli family of zinc finger transcriptional factors and induction of HH target gene expression (PTCH, Gli1, cyclin, Bcl-2, etc). The WNT and HH signaling pathways play critical roles in many developmental processes, such as cell-fate determination, cell proliferation, neural patterning, stem cell renewal, tissue homeostasis and repair, and tumorigenesis, among many others.


Pssm-ID: 320089  Cd Length: 314  Bit Score: 44.23  E-value: 4.33e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  852 CLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILI--LVGQTQT-----------------HNKSiCTTTTAFLH 912
Cdd:cd13951     24 LLTLFTLLTFLIDPSRFRYPERPIIFLALCYNFYSLGYLVrlVVGREGIacgkdegkpylllvdgsGNAP-CAIVFLLTY 102
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 1907068048  913 FFFLASFCW--VLTEAWqsYMAVTGKIRTRLIRKR---FLCLGWGLPA 955
Cdd:cd13951    103 YFGMAASIWwvILTLTW--FLSAGLKWSSEAIEKKssyFHLVAWGLPA 148
7tmF_FZD3 cd15033
class F frizzled subfamily 3, member of 7-transmembrane G protein-coupled receptors; This ...
898-1010 9.32e-04

class F frizzled subfamily 3, member of 7-transmembrane G protein-coupled receptors; This group includes subfamily 3 of the frizzled (FZD) family of seven transmembrane-spanning proteins, which constitute a novel and separate class of GPCRs, and its closely related proteins. This class F protein family consists of 10 isoforms (FZD1-10) in mammals. The FZDs are activated by the wingless/int-1 (WNT) family of secreted lipoglycoproteins and preferentially couple to stimulatory G proteins of the Gs family, which activate adenylate cyclase, but can also couple to G proteins of the Gi/Gq families. In the WNT/beta-catenin signaling pathway, the WNT ligand binds to FZD and a lipoprotein receptor-related protein (LRP) co-receptor. This leads to the stabilization and translocation of beta-catenin to the nucleus, where it induces the activation of TCF/LEF family transcription factors. The conserved cytoplasmic motif of FZD, Lys-Thr-X-X-X-Trp, is required for activation of the WNT/beta-catenin pathway, and for membrane localization and phosphorylation of Dsh (dishevelled) protein, a key component of the WNT pathway that relays the WNT signals from the activated receptor to downstream effector proteins. The WNT pathway plays a critical role in many developmental processes, such as cell-fate determination, cell proliferation, neural patterning, stem cell renewal, tissue homeostasis and repair, and tumorigenesis, among many others.


Pssm-ID: 320161  Cd Length: 321  Bit Score: 43.01  E-value: 9.32e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  898 THNKSiCTTTTAFLHFFFLASFCW--VLTEAWqsYMAVTGKIRTRLIRKR---FLCLGWGLPALVVATSVGFTRTKGYGT 972
Cdd:cd15033     90 SHNKA-CTMLFMVLYFFTMAGSVWwvILTITW--FLAAVPKWGSEAIEKKallFHASAWGIPGTLTIILLAMNKIEGDNI 166
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1907068048  973 DHYCWLSLEG--GLLYAFVGPAAAVVLVNMVI---GILVFNKL 1010
Cdd:cd15033    167 SGVCFVGLYDvdALRYFVLAPLCLDVVVGVSLllaGIISLNRV 209
7tmF_FZD6 cd15032
class F frizzled subfamily 6, member of 7-transmembrane G protein-coupled receptors; This ...
852-1022 9.91e-04

class F frizzled subfamily 6, member of 7-transmembrane G protein-coupled receptors; This group includes subfamily 6 of the frizzled (FZD) family of seven transmembrane-spanning proteins, which constitute a novel and separate class of GPCRs, and its closely related proteins. This class F protein family consists of 10 isoforms (FZD1-10) in mammals. The FZDs are activated by the wingless/int-1 (WNT) family of secreted lipoglycoproteins and preferentially couple to stimulatory G proteins of the Gs family, which activate adenylate cyclase, but can also couple to G proteins of the Gi/Gq families. In the WNT/beta-catenin signaling pathway, the WNT ligand binds to FZD and a lipoprotein receptor-related protein (LRP) co-receptor. This leads to the stabilization and translocation of beta-catenin to the nucleus, where it induces the activation of TCF/LEF family transcription factors. The conserved cytoplasmic motif of FZD, Lys-Thr-X-X-X-Trp, is required for activation of the WNT/beta-catenin pathway, and for membrane localization and phosphorylation of Dsh (dishevelled) protein, a key component of the WNT pathway that relays the WNT signals from the activated receptor to downstream effector proteins. The WNT pathway plays a critical role in many developmental processes, such as cell-fate determination, cell proliferation, neural patterning, stem cell renewal, tissue homeostasis and repair, and tumorigenesis, among many others.


Pssm-ID: 320160  Cd Length: 321  Bit Score: 42.91  E-value: 9.91e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  852 CLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILI--LVGQTQTHNKS-----------------ICTTTTAFLH 912
Cdd:cd15032     24 CATLFTFLTFLIDVKRFRYPERPIIYYSVCYSIVSLMYFIgfLLGNSTACNKAdeklelgdtvvlgsqnkACTVLFMLLY 103
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  913 FFFLASFCW--VLTEAWqsYMAVTGKIRTRLIRKR---FLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSL--EGGLL 985
Cdd:cd15032    104 FFTMAGTIWwvILTITW--FLAAGRKWSCEAIEQKalwFHAVAWGIPGFLTIMLLAMNKVEGDNISGVCFVGLydLDASR 181
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1907068048  986 YAFVGPAAAVVLVNMVI---GILVFN---KLVSRDGILDKKLK 1022
Cdd:cd15032    182 YFVLLPLCLCVFVGLSLllaGIISLNhvrQVIQHDGRNQEKLK 224
TSP1_CCN pfam19035
CCN3 Nov like TSP1 domain; This entry represents a sub-type of TSP1 domains found in ...
261-301 1.21e-03

CCN3 Nov like TSP1 domain; This entry represents a sub-type of TSP1 domains found in matricellular CCN proteins that have an alternative disulphide binding pattern compared to the canonical TSP1 domains.


Pssm-ID: 465952  Cd Length: 44  Bit Score: 38.08  E-value: 1.21e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1907068048  261 SQWSACSVTCGQGSQVRtrtcVSPYGTHCSgPLRESRVCNN 301
Cdd:pfam19035    6 TEWSPCSKTCGMGVSTR----VSNDNAECK-LVTETRLCQL 41
7tmE_cAMP_R_Slime_mold cd14940
slime mold cyclic AMP receptor, member of the class E family of seven-transmembrane G ...
853-1027 1.47e-03

slime mold cyclic AMP receptor, member of the class E family of seven-transmembrane G protein-coupled receptors; This family represents the class E of seven-transmembrane G-protein coupled receptors found in soil-living amoebas, commonly referred to as slime molds. The class E family includes cAMP receptors (cAR1-4) and cAMP receptors-like proteins (CrlA-C) from Dictyostelium discoideum, and their highly homologous cAMP receptors (TasA and TasB) from Polysphondylium pallidum. So far, four subtypes of cAMP receptors (cAR1-4) have been identified that play an essential role in the detection and transmit of the periodic extracellular cAMP waves that regulate chemotactic cell movement during Dictyostelium development, from the unicellular amoeba aggregate into many multicellular slugs and then differentiate into a sporocarp, a fruiting body with cells specialized for different functions. These four subtypes differ in their expression levels and patterns during development. cAR1 is high-affinity receptor that is the first one to be expressed highly during early aggregation and continues to be expressed at low levels during later developmental stages. cAR1 detects extracellular cAMP and is coupled to G-alpha2 protein. Cells lacking cAR1 fail to aggregate, demonstrating that cAR1 is responsible for aggregation. During later aggregation the high-affinity cAR3 receptor is expressed at low levels. Nonetheless, cells lacking cAR3 do not show an obviously altered pattern of development and are still able to aggregate into fruiting bodies. In contrast, cAR2 and cAR4 are low affinity receptors expressed predominantly after aggregation in pre-stalk cells. cAR2 is essential for normal tip formation and deletion of the receptor arrests development at the mound stage. On the other hand, CAR4 regulates axial patterning and cellular differentiation, and deletion of the receptor results in defects during culmination. Furthermore, three cAMP receptor-like proteins (CrlA-C) were identified in Dictyostelium that show limited sequence similarity to the cAMP receptors. Of these CrlA is thought to be required for normal cell growth and tip formation in developing aggregates.


Pssm-ID: 320094 [Multi-domain]  Cd Length: 256  Bit Score: 41.95  E-value: 1.47e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  853 LALITLAVVYAALWRY--IRSERSIILINFCLSIISSNILILVG---QTQTHNKSICTTTTAFLHFFFLASFCWVLTEAW 927
Cdd:cd14940     12 SSIIGCLFVLVGFWLLklLRNHITRVISCFCLTSLLKDIIYTMLtltQSARPDGFLCYLYAIVITYGSLSCWLWTLCLAI 91
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  928 QSYMA-VTGKIRTRLIRKRFLCLGWGLPALVVATSVGFtrtKGYG-TDHYCWLSLEG-----GLLYafvGPAAAVVLVNM 1000
Cdd:cd14940     92 SIYLLiVKREPEPEKFEKYYHFVCWGLPLISTIIMLIK---HHYGpVGNWCWIGNQYtgyrfGLFY---GPFFIIFGISA 165
                          170       180
                   ....*....|....*....|....*....
gi 1907068048 1001 VIGILVFNKL--VSRDGILDKKLKHRAGQ 1027
Cdd:cd14940    166 VLVGLTSHYTyqVIHNWVSDNKDLHKTYQ 194
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
316-360 2.35e-03

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 37.43  E-value: 2.35e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907068048  316 PWSLCSFTCGRGQRTRTRSCTPPqYGGRP-----CEGPETHH--KPCNIALC 360
Cdd:pfam19030    5 PWGECSVTCGGGVQTRLVQCVQK-GGGSIvpdseCSAQKKPPetQSCNLKPC 55
PTZ00087 PTZ00087
thrombosponding-related protein; Provisional
366-413 8.33e-03

thrombosponding-related protein; Provisional


Pssm-ID: 185438  Cd Length: 340  Bit Score: 40.31  E-value: 8.33e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1907068048  366 WQEWSSWSHCSVTCS--NGTQQRSRQCtaaAHGGSEC-RGPWAESRECYNP 413
Cdd:PTZ00087   233 YTEWGEWSNCSMECDhpDNVQIRERKC---AHPSGDCfKGDLKETRPCQVP 280
7tmF_FZD3_FZD6-like cd15910
class F frizzled subfamilies 3, 6 and related proteins; member of 7-transmembrane G ...
845-1022 8.92e-03

class F frizzled subfamilies 3, 6 and related proteins; member of 7-transmembrane G protein-coupled receptors; This group includes subfamilies 3 and 6 of the frizzled (FZD) family of seven transmembrane-spanning proteins, which constitute a novel and separate class of GPCRs, and their closely related proteins. This class F protein family consists of 10 isoforms (FZD1-10) in mammals. The FZDs are activated by the wingless/int-1 (WNT) family of secreted lipoglycoproteins and preferentially couple to stimulatory G proteins of the Gs family, which activate adenylate cyclase, but can also couple to G proteins of the Gi/Gq families. In the WNT/beta-catenin signaling pathway, the WNT ligand binds to FZD and a lipoprotein receptor-related protein (LRP) co-receptor. This leads to the stabilization and translocation of beta-catenin to the nucleus, where it induces the activation of TCF/LEF family transcription factors. The conserved cytoplasmic motif of FZD, Lys-Thr-X-X-X-Trp, is required for activation of the WNT/beta-catenin pathway, and for membrane localization and phosphorylation of Dsh (dishevelled) protein, a key component of the WNT pathway that relays the WNT signals from the activated receptor to downstream effector proteins. The WNT pathway plays a critical role in many developmental processes, such as cell-fate determination, cell proliferation, neural patterning, stem cell renewal, tissue homeostasis and repair, and tumorigenesis, among many others.


Pssm-ID: 320576  Cd Length: 321  Bit Score: 40.22  E-value: 8.92e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  845 IVGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILI--LVGQTQTHNKSI-----------------CT 905
Cdd:cd15910     17 VVSILCLLATLFTFLTFLIDVNRFRYPERPIIFYAVCYFVVSLIFFVgfLLGDDVACNHAImdenngatvvegsrnkaCT 96
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068048  906 TTTAFLHFFFLASFCW--VLTEAWqsYMAVTGKIRTRLIRKR---FLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSL 980
Cdd:cd15910     97 ILFMILYFFTMAGTVWwvILTITW--FLAAGFKWGSEAIEKKalyFHALAWGIPGVLTMVLLATNKIEGDNISGVCFVGL 174
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|
gi 1907068048  981 --EGGLLYAFVGPAAAVVLVNMVI---GILVFN---KLVSRDGILDKKLK 1022
Cdd:cd15910    175 ydSDGLRFFVLLPLCLYVLVGMSLllaGIICLNrvrKSIHDDETNQEKLA 224
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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