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Conserved domains on  [gi|1958776200|ref|XP_038965782|]
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zinc finger protein 189 isoform X3 [Rattus norvegicus]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11473154)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940|11179890|12665246|10940247
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
38-428 2.37e-17

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 84.75  E-value: 2.37e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200  38 HTNVRKRPNSEEKCHKCEECGKRFVRKAHFIQHQRVHTGEKPFQCN--ECGKSFSRSSFVIEHQRIHTGERPYECNYCG- 114
Cdd:COG5048    20 PKSTLKSLSNAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSysGCDKSFSRPLELSRHLRTHHNNPSDLNSKSLp 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 115 -------------------KTFSVSSTLIRHQRIHTGERP------YQCNQCKQSFSQR--------------------- 148
Cdd:COG5048   100 lsnskasssslsssssnsnDNNLLSSHSLPPSSRDPQLPDllsisnLRNNPLPGNNSSSvntpqsnslhpplpanslskd 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 149 ----RSLVKHQRIHTGEKPHKCSDCGKAFSWKSHLIEHQRTHTGEKPYHCTKCKKSFSRNSLLVEHQRIHTGERPHKCGE 224
Cdd:COG5048   180 pssnLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASE 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 225 CGKAFRLSTYLIQHQKIHTGE-------KPFLCIECGKSFSRSSFLIEHQR--IHTGE--RPYQC--QECGKSFSQLCNL 291
Cdd:COG5048   260 SPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDAL 339

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 292 TRHQRIHTGDKPHKC--EECGKAFSRSSGLIQHQRIHIREKTSPFKetkgsfdPNCGLVIQQEVYPKEKSYkcddcgktf 369
Cdd:COG5048   340 KRHILLHTSISPAKEklLNSSSKFSPLLNNEPPQSLQQYKDLKNDK-------KSETLSNSCIRNFKRDSN--------- 403

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1958776200 370 sVSAHLVQHQRIHTGEKPylCTVCGKSFSRSSFLIEHQRIHTGERPYLCRQCGKSFSQL 428
Cdd:COG5048   404 -LSLHIITHLSFRPYNCK--NPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDL 459
zf-H2C2_2 pfam13465
Zinc-finger double domain;
459-483 9.95e-04

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 9.95e-04
                          10        20
                  ....*....|....*....|....*
gi 1958776200 459 LIQHQRIHTGEKPYRCEKCDKSFSQ 483
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
430-455 8.89e-03

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.88  E-value: 8.89e-03
                          10        20
                  ....*....|....*....|....*.
gi 1958776200 430 NLIRHQGVHTGNKPHKCEECGKAFSR 455
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
38-428 2.37e-17

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 84.75  E-value: 2.37e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200  38 HTNVRKRPNSEEKCHKCEECGKRFVRKAHFIQHQRVHTGEKPFQCN--ECGKSFSRSSFVIEHQRIHTGERPYECNYCG- 114
Cdd:COG5048    20 PKSTLKSLSNAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSysGCDKSFSRPLELSRHLRTHHNNPSDLNSKSLp 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 115 -------------------KTFSVSSTLIRHQRIHTGERP------YQCNQCKQSFSQR--------------------- 148
Cdd:COG5048   100 lsnskasssslsssssnsnDNNLLSSHSLPPSSRDPQLPDllsisnLRNNPLPGNNSSSvntpqsnslhpplpanslskd 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 149 ----RSLVKHQRIHTGEKPHKCSDCGKAFSWKSHLIEHQRTHTGEKPYHCTKCKKSFSRNSLLVEHQRIHTGERPHKCGE 224
Cdd:COG5048   180 pssnLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASE 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 225 CGKAFRLSTYLIQHQKIHTGE-------KPFLCIECGKSFSRSSFLIEHQR--IHTGE--RPYQC--QECGKSFSQLCNL 291
Cdd:COG5048   260 SPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDAL 339

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 292 TRHQRIHTGDKPHKC--EECGKAFSRSSGLIQHQRIHIREKTSPFKetkgsfdPNCGLVIQQEVYPKEKSYkcddcgktf 369
Cdd:COG5048   340 KRHILLHTSISPAKEklLNSSSKFSPLLNNEPPQSLQQYKDLKNDK-------KSETLSNSCIRNFKRDSN--------- 403

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1958776200 370 sVSAHLVQHQRIHTGEKPylCTVCGKSFSRSSFLIEHQRIHTGERPYLCRQCGKSFSQL 428
Cdd:COG5048   404 -LSLHIITHLSFRPYNCK--NPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDL 459
zf-H2C2_2 pfam13465
Zinc-finger double domain;
290-315 1.79e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.51  E-value: 1.79e-04
                          10        20
                  ....*....|....*....|....*.
gi 1958776200 290 NLTRHQRIHTGDKPHKCEECGKAFSR 315
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
459-483 9.95e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 9.95e-04
                          10        20
                  ....*....|....*....|....*
gi 1958776200 459 LIQHQRIHTGEKPYRCEKCDKSFSQ 483
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
430-455 8.89e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.88  E-value: 8.89e-03
                          10        20
                  ....*....|....*....|....*.
gi 1958776200 430 NLIRHQGVHTGNKPHKCEECGKAFSR 455
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
38-428 2.37e-17

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 84.75  E-value: 2.37e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200  38 HTNVRKRPNSEEKCHKCEECGKRFVRKAHFIQHQRVHTGEKPFQCN--ECGKSFSRSSFVIEHQRIHTGERPYECNYCG- 114
Cdd:COG5048    20 PKSTLKSLSNAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSysGCDKSFSRPLELSRHLRTHHNNPSDLNSKSLp 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 115 -------------------KTFSVSSTLIRHQRIHTGERP------YQCNQCKQSFSQR--------------------- 148
Cdd:COG5048   100 lsnskasssslsssssnsnDNNLLSSHSLPPSSRDPQLPDllsisnLRNNPLPGNNSSSvntpqsnslhpplpanslskd 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 149 ----RSLVKHQRIHTGEKPHKCSDCGKAFSWKSHLIEHQRTHTGEKPYHCTKCKKSFSRNSLLVEHQRIHTGERPHKCGE 224
Cdd:COG5048   180 pssnLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASE 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 225 CGKAFRLSTYLIQHQKIHTGE-------KPFLCIECGKSFSRSSFLIEHQR--IHTGE--RPYQC--QECGKSFSQLCNL 291
Cdd:COG5048   260 SPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDAL 339

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 292 TRHQRIHTGDKPHKC--EECGKAFSRSSGLIQHQRIHIREKTSPFKetkgsfdPNCGLVIQQEVYPKEKSYkcddcgktf 369
Cdd:COG5048   340 KRHILLHTSISPAKEklLNSSSKFSPLLNNEPPQSLQQYKDLKNDK-------KSETLSNSCIRNFKRDSN--------- 403

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1958776200 370 sVSAHLVQHQRIHTGEKPylCTVCGKSFSRSSFLIEHQRIHTGERPYLCRQCGKSFSQL 428
Cdd:COG5048   404 -LSLHIITHLSFRPYNCK--NPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDL 459
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
162-527 2.93e-12

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 68.57  E-value: 2.93e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 162 KPHKCSDCGKAFSWKSHLIEHQRTHTGEKPYHCTK--CKKSFSRNSLLVEHQRIHTGERPHKC----------------G 223
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNskslplsnskasssslS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 224 ECGKAFRLSTYLIQHQKIHTGEKPFLCIECGKSFSRSSFLIEHQRIHTGER-------PYQCQECGKSFSQLCNLTRHQR 296
Cdd:COG5048   112 SSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPqsnslhpPLPANSLSKDPSSNLSLLISSN 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 297 IHTGDKPHKCEECGKAFSRSSGLIQHQRIHIREKTSPFKETKGSFDPNCGLVIQQEVYPKEKSYKCDDCGKTFSVSAHLV 376
Cdd:COG5048   192 VSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTASSQ 271

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 377 QHQRIHTGE-------KPYLCTVCGKSFSRSSFLIEHQR--IHTGE--RPYLCR--QCGKSFSQLCNLIRHQGVHTGNKP 443
Cdd:COG5048   272 SSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPysLCGKLFSRNDALKRHILLHTSISP 351

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 444 HKC--EECGKAFSRNS-----GLIQHQRIHTGEKPYRCE--KCDKSFSQQRSLVNHQKIHAEVKTQEIYeCDACGEAFTC 514
Cdd:COG5048   352 AKEklLNSSSKFSPLLnneppQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPYNCK-NPPCSKSFNR 430

                         410
                  ....*....|...
gi 1958776200 515 QISLIQHQKLHIM 527
Cdd:COG5048   431 HYNLIPHKKIHTN 443
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
24-262 3.30e-09

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 59.32  E-value: 3.30e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200  24 PRDSLTEEQKMFRGHTNVRKRPN--SEEKCHKCEECGKRFVRKAHFIQHQRVHTGE-------KPFQCNECGKSFSRSSF 94
Cdd:COG5048   225 SSLPLTTNSQLSPKSLLSQSPSSlsSSDSSSSASESPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSP 304

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200  95 VIEHQR--IHTGE--RPYEC--NYCGKTFSVSSTLIRHQRIHTGERPYQCNQCKQSFSQRRSLvkhqrihtGEKPHKCSD 168
Cdd:COG5048   305 LTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL--------NNEPPQSLQ 376

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 169 cgkafswKSHLIEHQRTHTGEKPyhctKCKKSFSRNSLLVEHQRIHTGERPH--KCGECGKAFRLSTYLIQHQKIHTGEK 246
Cdd:COG5048   377 -------QYKDLKNDKKSETLSN----SCIRNFKRDSNLSLHIITHLSFRPYncKNPPCSKSFNRHYNLIPHKKIHTNHA 445

                         250
                  ....*....|....*.
gi 1958776200 247 PFLCIECGKSFSRSSF 262
Cdd:COG5048   446 PLLCSILKSFRRDLDL 461
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 384-462 6.73e-05

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 45.48  E-value: 6.73e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958776200 384 GEKPYLCTV--CGKSFsRSSFLIEHQRIHTgerpylcrQCGKSFSQLCNLIRHQGVHTGNKPHKCEECGKAFSRNSGLIQ 461
Cdd:COG5189   346 DGKPYKCPVegCNKKY-KNQNGLKYHMLHG--------HQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  .
gi 1958776200 462 H 462
Cdd:COG5189   417 H 417
zf-H2C2_2 pfam13465
Zinc-finger double domain;
290-315 1.79e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.51  E-value: 1.79e-04
                          10        20
                  ....*....|....*....|....*.
gi 1958776200 290 NLTRHQRIHTGDKPHKCEECGKAFSR 315
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
374-399 9.47e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 9.47e-04
                          10        20
                  ....*....|....*....|....*.
gi 1958776200 374 HLVQHQRIHTGEKPYLCTVCGKSFSR 399
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
459-483 9.95e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 9.95e-04
                          10        20
                  ....*....|....*....|....*
gi 1958776200 459 LIQHQRIHTGEKPYRCEKCDKSFSQ 483
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
263-287 1.98e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 1.98e-03
                          10        20
                  ....*....|....*....|....*
gi 1958776200 263 LIEHQRIHTGERPYQCQECGKSFSQ 287
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
150-174 2.06e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 2.06e-03
                          10        20
                  ....*....|....*....|....*
gi 1958776200 150 SLVKHQRIHTGEKPHKCSDCGKAFS 174
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
178-203 2.20e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.20e-03
                          10        20
                  ....*....|....*....|....*.
gi 1958776200 178 HLIEHQRTHTGEKPYHCTKCKKSFSR 203
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
234-259 2.58e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.58e-03
                          10        20
                  ....*....|....*....|....*.
gi 1958776200 234 YLIQHQKIHTGEKPFLCIECGKSFSR 259
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
66-91 3.33e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 3.33e-03
                          10        20
                  ....*....|....*....|....*.
gi 1958776200  66 HFIQHQRVHTGEKPFQCNECGKSFSR 91
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
403-427 6.75e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.27  E-value: 6.75e-03
                          10        20
                  ....*....|....*....|....*
gi 1958776200 403 LIEHQRIHTGERPYLCRQCGKSFSQ 427
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
430-455 8.89e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.88  E-value: 8.89e-03
                          10        20
                  ....*....|....*....|....*.
gi 1958776200 430 NLIRHQGVHTGNKPHKCEECGKAFSR 455
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
207-229 8.89e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.88  E-value: 8.89e-03
                          10        20
                  ....*....|....*....|...
gi 1958776200 207 LVEHQRIHTGERPHKCGECGKAF 229
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSF 24
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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