|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-557 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 636.41 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 1 MCSLLFTILFIFSITVFLFGVYFLLFDYTLLIEWYLFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGEL 80
Cdd:MTH00165 3 MCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 81 NINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSYNAGMLTALMNRIGDVAILISIAWMLNFG 160
Cdd:MTH00165 83 NINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 161 SWNYIFYNDFFPFSWELRIILILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDLGL 240
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 241 SWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNC 320
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 321 QDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMFG 400
Cdd:MTH00165 323 QDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 401 DNNYFPVFSFDDSNYYISFSMIVLLFVSVFGGSLLSWLVFPFPNMILLPMYLKFLVLFTVFMGIYFGYLIYSFKFGSNIF 480
Cdd:MTH00165 403 DFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLK 482
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 219524251 481 SVSYLLMFNFLGLMWFMPNLSSYCI-YYPLGYGYHVSNCIDFGWGELLGGQGLYMYFIYFMDYIYFWYDSNFKVYLLT 557
Cdd:MTH00165 483 SLKNYKLSSFLGSMWFMPFLSTYGIsYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLS 560
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-556 |
2.13e-160 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 469.32 E-value: 2.13e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 1 MCSLLFTILFIFSITVFLFGVYFLLFDYTLLIEWYLFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGEL 80
Cdd:MTH00151 3 MSSLSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDP 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 81 NINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSYNAGMLTALMNRIGDVAILISIAWMLNFG 160
Cdd:MTH00151 83 FLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 161 SWNYIFYNDFFPFSWelriILILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-NFLLMDLG 239
Cdd:MTH00151 163 HWSILSMWDFKLSGW----LGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFfPFLSSSSG 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 240 LSWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNN 319
Cdd:MTH00151 239 FSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSG 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 320 CQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMF 399
Cdd:MTH00151 319 TQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVW 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 400 GDNNYFPVFSFDDSNYYISFSMIVLLFVSVFGGSLLSWLVFPFPNMILLPMYLKFLVLFTVFMGIYFGyliySFKFGSNI 479
Cdd:MTH00151 399 GSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLS----FGFWDSGF 474
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 219524251 480 FSVSYLLMFNFLGLMWFMPNLSSY-CIYYPLGYGYHVSNCIDFGWGELLGGQGLYMYFIYFMDYIYFWYDSNFKVYLL 556
Cdd:MTH00151 475 SSSKMVKLSFFFSSMWFLSPLSSQpLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIG 552
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
6-556 |
2.52e-155 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 456.41 E-value: 2.52e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 6 FTILFIFSITVFLFGVYFLLFDYTLLIEWYLFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRF 85
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 86 VFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSYNAGMLTALMNRIGDVAILISIAWMLNFGSWNYI 165
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWNIF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 166 FYNDFFPFSWELriiLILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-NFLLMDLGLSWIL 244
Cdd:MTH00209 166 YLNFNSNLGSVI---SVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFfPSLFSSPFFSMSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 245 LFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNCQDIR 324
Cdd:MTH00209 243 LLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIR 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 325 YLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMFGDNNY 404
Cdd:MTH00209 323 MVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSS 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 405 FPVFSFDDSNYYISFSMIVLLFVSVFGGSLLSWLVFPFPNMILLPMYLKFLVLFTVFMGIYFGYLIYSFKFgsniFSVSY 484
Cdd:MTH00209 403 KSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNF----FLIKG 478
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 219524251 485 LLMFNFLGLMWFMPNLSSY-CIYYPLGYGYHVSNCIDFGWGELLGGQGLYMYFIYFMDYIYFWYDSNFKVYLL 556
Cdd:MTH00209 479 YKVNYFLSQMWFLPDLSSQpVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVT 551
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
8-533 |
1.36e-146 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 434.58 E-value: 1.36e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 8 ILFIFSITVFLFGVYFLLFDYTLLIEWYLFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVF 87
Cdd:MTH00207 13 LLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFIS 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 88 LLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSYNAGMLTALMNRIGDVAILISIAWMLNFGSWNYIFY 167
Cdd:MTH00207 93 LVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSITNM 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 168 NDFFPFSWelriILILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-NFLLMDLGLSWILLF 246
Cdd:MTH00207 173 WQTDMNNY----IALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFyPFLSSTYWFNPALLL 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 247 VGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNCQDIRYL 326
Cdd:MTH00207 249 TASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTM 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 327 GSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMFGDNNYFP 406
Cdd:MTH00207 329 GNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSP 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 407 VFSFDDSNYYISFSMIVLLFVSVFGGSLLSWLVFPFPNMILLPMYLKFLVLFTVFMGIYFGYLIYSFKFGSNIFSVSYLL 486
Cdd:MTH00207 409 YHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPL 488
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 219524251 487 MFNFLGLMWFMPNLSS-YCIYYPLGYGYHVSNCIDFGWGELLGGQGLY 533
Cdd:MTH00207 489 SHFASCLMWFLVPLSSqFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTF 536
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
8-555 |
8.54e-101 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 317.28 E-value: 8.54e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 8 ILFIFSITVFLFGVYFLLFDYTLLIEWYLFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVF 87
Cdd:MTH00211 35 VKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFK 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 88 LLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSYNAGMLTALM-NRIGDVAILISIAWML-NFGSWNYi 165
Cdd:MTH00211 115 YLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIyNRIGDIGLLLSMVWLLlNLNSWEI- 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 166 fyNDFFPFSWELRIILILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDLGLSW-IL 244
Cdd:MTH00211 194 --SQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILgAV 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 245 LFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNCQDIR 324
Cdd:MTH00211 272 LLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIR 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 325 YLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMFGDNNY 404
Cdd:MTH00211 352 KMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRF 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 405 FPVFSFDDSNYYISFSMIVLLFVSVFGGSLLSWLVFPFPNMIL-LPMYLKFLVLFTVFMGIYFGylIYSFKFGSNIFSVS 483
Cdd:MTH00211 432 LSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILsLPFLLKLMPLLVTIVGLLLG--LELVNLTHKQLKTS 509
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 219524251 484 YLLMFNFLGLmwFMPNLSSYCIYYPLGYGYHVS-NCIDFGWGELLGGQGLYMYFIYFMDYIYFWYDSNFKVYL 555
Cdd:MTH00211 510 TLSFSNMLGY--YPPIIHRLLPKLSLKWGQTLStHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYL 580
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
5-474 |
4.16e-93 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 297.45 E-value: 4.16e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 5 LFTILFIFSITVFLFGVYFLLFD---YTLLIEWylFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELN 81
Cdd:COG1009 32 WLAALAPLAAFVLSLLLFPAVLGgevVVELYTW--IPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPG 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 82 INRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLV-IYYQNISSYNAGMLTALMNRIGDVAILISIAWMLN-F 159
Cdd:COG1009 110 LARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIgFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAiA 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 160 GSWNY--IFYN-DFFPFSWELRIILILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLM 236
Cdd:COG1009 190 GTLNFseLLAAaPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFA 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 237 DLGL-SWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIH 315
Cdd:COG1009 270 LSPVwLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIH 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 316 NVNNcQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILE-LVSLSWVNFLIFFIYFFSTGLTASHSFRLY 394
Cdd:COG1009 350 ATGT-RDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLF 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 395 YYSMFGDNNYFPVFSFDDSNYYISFSMIVLLFVSVFGGSLLSWL---------VFPFPNMILLPMYLKFLVLFTVFMGIY 465
Cdd:COG1009 429 FLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIA 508
|
....*....
gi 219524251 466 FGYLIYSFK 474
Cdd:COG1009 509 LGYLLYLKR 517
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
3-471 |
1.32e-84 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 275.31 E-value: 1.32e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 3 SLLFTILFIFSITVFLFGVYFLLFDYTL-----LIEWYLFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMS 77
Cdd:TIGR01974 29 SGIIGIGSVGLSAALSAFVFVDFFLNGEgeaftQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 78 GELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLV-IYYQNISSYNAGMLTALMNRIGDVAILISIAWM 156
Cdd:TIGR01974 109 HDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLI 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 157 LN-FGSWNY--IFYNDFFPFSWELRIILILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNF 233
Cdd:TIGR01974 189 FWyFGTLNFqeVFALAPGAFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSP 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 234 L-LMDLGLSWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGS 312
Cdd:TIGR01974 269 LfELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGS 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 313 IIHNVNNCQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIYFFSTGLTASHSFR 392
Cdd:TIGR01974 349 VIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFR 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 393 LYYYSMFGDNNYFPVFSFDDSNYYISFSMIVLLFVSVFGGSLLSWLVFPFPNMIL-----------LPMYLKFLVLFTVF 461
Cdd:TIGR01974 429 LIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKGVLPtsaepalehhhVPALEIWSPTAVAI 508
|
490
....*....|
gi 219524251 462 MGIYFGYLIY 471
Cdd:TIGR01974 509 LGILLAYLLY 518
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
29-467 |
2.61e-83 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 271.65 E-value: 2.61e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 29 TLLIEWYLFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMFIFSMMFLILSPNLISI 108
Cdd:MTH00004 61 SITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 109 LLGWDGLGLVSYCLVIYYQNISSYNAGMLTA-LMNRIGDVAILISIAWM-LNFGSWNY--IFYNDFFPFswelrIILILI 184
Cdd:MTH00004 141 FIGWEGVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWEIqqLFSPTQTPT-----LPLLGL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 185 ILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLM--DLGLSwILLFVGCLTMFMSGLGANFE 262
Cdd:MTH00004 216 ILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQnnQTALT-ICLCLGALTTLFAATCALTQ 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 263 FDLGSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNCQDIRYLGSIVYFMPLTSISFNV 342
Cdd:MTH00004 295 NDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTI 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 343 SILSLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMFGDNNYFPVFSFDDSNYYISFSMI 422
Cdd:MTH00004 375 GNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPIT 454
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 219524251 423 VLLFVSVFGGSLLSWLVFPF-PNMILLPMYLKFLVLFTVFMGIYFG 467
Cdd:MTH00004 455 RLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLA 500
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
46-474 |
5.14e-83 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 271.26 E-value: 5.14e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 46 MTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLV-I 124
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIgF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 125 YYQNISSYNAGMLTALMNRIGDVAILISIAWML-NFGSWNY--IF--YNDFFPFSWE-LRIILILIILASMTSSAQIPFS 198
Cdd:PRK06590 158 WYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFaEFGSLNYdeVFaaAPQFFGLGWSaLTLICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 199 AWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN--FLLMDLGLSWILlFVGCLTMFMSGLGANFEFDLGSIIALSTLSQ 276
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSplFELSPEALLFVA-IVGAVTALFAAFIGLVQTDIKRVLAYSTMSQ 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 277 LGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNCQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGF 356
Cdd:PRK06590 317 LGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGF 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 357 YSKDLILElVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMFGDNNYFPVFSFDDSNYYIsFSMIVLLFVSVFGG---- 432
Cdd:PRK06590 397 FSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKEKEKIHHPHESPAVMT-LPLIVLAVLSVFAGaliv 474
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 219524251 433 -SLLSWLVFPFPNMIL-----LPMYLKFLVLFTVFMGIYFGYLIYSFK 474
Cdd:PRK06590 475 pPFLGVLPLTTELAHGeaehhLPVWVALLPLVVALAGIALAWLLYLKK 522
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
7-556 |
1.21e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 267.99 E-value: 1.21e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 7 TILFIFSITVFLFGVYFLLFDYTLLI----EWylFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNI 82
Cdd:MTH00208 60 SLLKTLAFLSLINLLIWILLGCPNINislsNW--LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNK 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 83 NRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSYNAGMLTALM-NRIGDVAILISIAW-MLNFG 160
Cdd:MTH00208 138 NAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIyNRIGDIGIILFLSLsLINFN 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 161 SWN-----YIFYNDFFPFSWELriilILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLL 235
Cdd:MTH00208 218 SWNlneilSLNNSNSFLINILL----FGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLI 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 236 MD--LGLSWILlFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSI 313
Cdd:MTH00208 294 SNspWFLSLCL-ILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSI 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 314 IHNVNNCQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIYFFSTGLTASHSFRL 393
Cdd:MTH00208 373 IHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRI 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 394 YYYSMFGDNNYFPVFSFDDSNYYISFSMIVLLFVSVFGGSLLSWLVFPFPNMIlLPMYLKFLVLFTVFMGIYFGYLIYSF 473
Cdd:MTH00208 453 IFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPLT-LPLILKSLPLIVTIIGAAFSFSFLLS 531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 474 kFGSNIFSVSYllmFNFLGLMWFMPNLSSYCI--YYPLGYGYHVSNCIDFGWGELLGGQGLYMYFIYFMDYIYFWYDSNF 551
Cdd:MTH00208 532 -LSSNPINSNF---FSFLSNQWFFVNISHSIIisFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYI 607
|
....*
gi 219524251 552 KVYLL 556
Cdd:MTH00208 608 KQYLL 612
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
34-532 |
1.34e-79 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 261.77 E-value: 1.34e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 34 WYLFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWD 113
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 114 GLGLVSYCLVIYYQNISSYNAGMLTALM-NRIGDVAILISIAW-MLNFGSW--NYIF--YNDFFPFswelriiLILIILA 187
Cdd:MTH00066 144 GVGIMSFLLIGWWHARADANTAALQAVLyNRVGDIGLILSMAWlAMNTNSWelQQIFllNDNSTLP-------LLGLILA 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 188 SMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMD--LGLSwILLFVGCLTMFMSGLGANFEFDL 265
Cdd:MTH00066 217 AAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENnqTALT-ICLCLGALTTLFTAACALTQNDI 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 266 GSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNCQDIRYLGSIVYFMPLTSISFNVSIL 345
Cdd:MTH00066 296 KKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSL 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 346 SLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMFGDNNYFPVFSFDDSNYYISFSMIVLL 425
Cdd:MTH00066 376 ALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLA 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 426 FVSVFGGSLLSWLVFPFPNMIL-LPMYLKFLVLFTVFMGIYFGYLIysfkfgSNIFSVSYL--LMFNFLGLMWFMPNLSS 502
Cdd:MTH00066 456 WGSIIAGLLIIFNILPMKPQILtMPTFMKLAALLVTLLGLLIALDL------AKITSKTTPktKMHSFSNLLAFFPTIIH 529
|
490 500 510
....*....|....*....|....*....|..
gi 219524251 503 YCI-YYPLGYGYHVS-NCIDFGWGELLGGQGL 532
Cdd:MTH00066 530 RLSpKTNLNSGQNIAtHLTDMTWYEKSGPKGL 561
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-464 |
2.42e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 250.54 E-value: 2.42e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 1 MCSLLFTILFIFSITvflfgvyfllfdYTLLIEWYLFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGEL 80
Cdd:MTH00108 45 IISLIPTMMFIHSGQ------------EMIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDP 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 81 NINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSYNAGMLTA-LMNRIGDVAILISIAW-MLN 158
Cdd:MTH00108 113 NINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLN 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 159 FGSWNY--IFYNDFFPFSWELriilILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLM 236
Cdd:MTH00108 193 LNSWDLqqIFMLNPNNSNLPL----MGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLME 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 237 D--LGLSwILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSII 314
Cdd:MTH00108 269 NnkTIQT-LTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSII 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 315 HNVNNCQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIYFFSTGLTASHSFRLY 394
Cdd:MTH00108 348 HNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRII 427
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 219524251 395 YYSMFGDNNYFPVFSFDDSNYYISFSMIVLLFVSVFGGSLLSWLVFPF--PNMIlLPMYLKFLVLFTVFMGI 464
Cdd:MTH00108 428 FFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTtiPQMT-MPLYLKLTALAVTILGF 498
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
8-537 |
5.70e-70 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 236.51 E-value: 5.70e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 8 ILFIFSITVFLFGVYFLLFDYTLLIEWYLFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVF 87
Cdd:MTH00020 36 LIISLSWSFLIFYEILFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMS 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 88 LLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLV-IYYQNISSYNAGMLTALMNRIGDVAILISIAWMLN-FGSWNY- 164
Cdd:MTH00020 116 YLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFs 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 165 -IFYNDFFPFSWELRIILILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDLGLSWI 243
Cdd:MTH00020 196 sVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALI 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 244 LL-FVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNCQD 322
Cdd:MTH00020 276 IVtIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQD 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 323 IRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMFGDN 402
Cdd:MTH00020 356 MRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNT 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 403 NY-FPVFSF-DDSNYYISFSMIVLLFVSVFGGSLLSWLVFPF----PNMIllPMYLKFLVLFTVFMGIYFGYLIYSF--K 474
Cdd:MTH00020 436 NLkKAVFFHlHEGDWNLLLPLGILALGSIFVGYLAKEMIWSFqitlPPIV--PLSIKLLPVFLSLGGIGLVIILYFYssK 513
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 219524251 475 FGSNIFSVSYLLMFNFLGLMW-FMPNLSSYCIYYPLGYGYHVSN-CIDFGWGELLGGQGLYMYFI 537
Cdd:MTH00020 514 TFRVPFSFIGRNSYTFLGSAWqFNYILNYFLIKKIWKGGHLISYrTIDKGVLELVGPKGISNFLI 578
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
48-537 |
1.10e-66 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 227.97 E-value: 1.10e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 48 LIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLV-IYY 126
Cdd:MTH00210 76 LQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 127 QNISSYNAGMLTALMNRIGDVAILISIAWMLN-FGSWNYIFYNDFFPFSWE---LRIILILIILASMTSSAQIPFSAWLP 202
Cdd:MTH00210 156 TRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVTNINkesLTIICLLLFIGAVGKSAQLGLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 203 AAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDLGLSWILL-FVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMF 281
Cdd:MTH00210 236 DAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 282 GILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNCQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDL 361
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 362 ILELVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMFGDNN--YFPVFSFDDSNYYISFSMIVLLFVSVFGGSLLSWLV 439
Cdd:MTH00210 396 ILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNskKEVFIGVHESSWNITFPLLLLAFGSIFVGYLGKEVV 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 440 FPFPNMILLPMYLKFLVLFTVFMGIYFGYLIYS------FKFGSNIFSVSYLLMFNFLGLMW-FMPNLSSYCIYYPLGYG 512
Cdd:MTH00210 476 LSNVIPPIVPNSIKMIPLLFSLLGALLAFVIYNsmvfliKISRRGVSIRLYHVIYTFLNSAWqFNYVINHFIVKNIWKFG 555
|
490 500
....*....|....*....|....*.
gi 219524251 513 YHVS-NCIDFGWGELLGGQGLYMYFI 537
Cdd:MTH00210 556 HLITyRIIDRGLLEIIGPRGISKVLI 581
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
29-398 |
2.26e-66 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 226.64 E-value: 2.26e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 29 TLLIEWYLFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMFIFSMMFLILSPNLISI 108
Cdd:MTH00137 65 TIITNWNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 109 LLGWDGLGLVSYCLVIYYQNISSYNAGMLTA-LMNRIGDVAILISIAWML-NFGSWN----YIFYNDFfpfswELRIILI 182
Cdd:MTH00137 145 FIGWEGVGIMSFLLIGWWYGRADANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWEiqqiFALSKDF-----DLTLPLL 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 183 LIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMD--LGLSwILLFVGCLTMFMSGLGAN 260
Cdd:MTH00137 220 GLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENnqTALT-TCLCLGALTTLFTATCAL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 261 FEFDLGSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNCQDIRYLGSIVYFMPLTSISF 340
Cdd:MTH00137 299 TQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCL 378
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 219524251 341 NVSILSLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIYFFSTGLTASHSFRLYYY-SM 398
Cdd:MTH00137 379 TIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFvSM 437
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
8-546 |
6.54e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 204.77 E-value: 6.54e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 8 ILFIFSITVFLFGVYFLLFdYTLLIEWYLFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVF 87
Cdd:MTH00095 2 NILIFLILFFFFFLLLFIL-FLPFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 88 LLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSYNAGMLTALMNRIGDVAILISIAWMLNFGSWnyify 167
Cdd:MTH00095 81 VLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYY----- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 168 ndFFPFSWELRIILILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDLGLSWILLFV 247
Cdd:MTH00095 156 --FFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 248 GCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNCQDIRYLG 327
Cdd:MTH00095 234 GLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYS 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 328 SIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMfgdNNYFPV 407
Cdd:MTH00095 314 NNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFF---LSFSKV 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 408 FSFDDSNYYISFSMIVLLFVSVFggsLLSWLVFPFPNMILLPMYLKFLVLFTVFMGIYFgyliysfkfgsnIFSVSYLLM 487
Cdd:MTH00095 391 VNVYSSSVLMNFLSLMLVFFSVF---FLWWLNFNLLNLPSLFLYLDFYVPLFYLFMIML------------FSFFFFKLL 455
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 219524251 488 FNFLGLMWFMPNLSSYCIYYPLGYGYHVSNCIDFGWGELLGGQGLYMYFIYFMDYIYFW 546
Cdd:MTH00095 456 FKELKYKFFVDYFAKNVIYKLKNLKFFDLFLNKFGYKGFNFFSSFSFFFFSYMKSFKYN 514
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
28-401 |
7.95e-55 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 196.78 E-value: 7.95e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 28 YTLLIEWYlfNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMFIFSMMFLILSPNLIS 107
Cdd:PRK07376 69 YERLFEWA--SAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQ 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 108 ILLGWDGLGLVSYCLV-IYYQNISSYNAGMLTALMNRIGDVAILISIA---WMLNFGSWNYI------FYNDFFPFSWEL 177
Cdd:PRK07376 147 IYVFWELVGMCSYLLVgFWYDRKGAADAAQKAFVVNRVGDFGLLLGILglfWATGSFDFDGIadrlseLVSSGAVSGWLA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 178 RIILILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDL-GLSWILLFVGCLTMFMSG 256
Cdd:PRK07376 227 LLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFpAVMTVIAWTGAITAFLGA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 257 LGANFEFDLGSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNN--------CQDIRYLGS 328
Cdd:PRK07376 307 SIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGG 386
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 219524251 329 IVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILELVSLSwvNFLIFFIYFFSTGLTASHSFRLYYYSMFGD 401
Cdd:PRK07376 387 LRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
13-365 |
1.29e-46 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 173.61 E-value: 1.29e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 13 SITVFLFGVYFLLFDYTLLIEwyLFNLNSSSVIMT---LIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVFLL 89
Cdd:MTH00032 40 TLIALFLAYEVLINDAVVHIE--LYKWIESEIFIThigLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 90 LMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQN-ISSYNAGMLTALMNRIGDVAILISIAWM------LNFGSW 162
Cdd:MTH00032 118 SLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTF 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 163 NYIF---------YNDFFPFSWELR---IILILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 230
Cdd:MTH00032 198 NGGSvgsgimdrgYYGGGAYESPLApfaIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIR 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 231 FNFLLMDLGLSWILLFV-GCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSM-GYYEVAFFHLLTHALFKALLFM 308
Cdd:MTH00032 278 SFPLFEKAPLTLLIITIfGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFL 357
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 219524251 309 CAGSIIHNVN-NCQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILEL 365
Cdd:MTH00032 358 SAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
102-382 |
5.75e-46 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 163.25 E-value: 5.75e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 102 SPNLISILLGWDGLGLVSYCLVIYY-QNISSYNAGMLTALMNRIGDVAILISIAWMLNFGSWNYIF----YNDFFPFSWE 176
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 177 LRIILILIILASMTSSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFNFLLMDLGLSW--ILLFVGCLTMF 253
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIqqILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 254 MSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGY---YEVAFFHLLTHALFKALLFMCAGSIIHNVNNCQDIRYLGSIV 330
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 219524251 331 YFMPLTSISFNVSILSLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIYFFS 382
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
7-396 |
3.22e-43 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 159.54 E-value: 3.22e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 7 TILFIFSITVFLFGVYFLLFDYTLLIEWYLFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFV 86
Cdd:COG0651 31 ALSLLASLALLALALALLLQVLAGGPLVYALGGWPAPFGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFY 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 87 FLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSYNAGMLTALMNRIGDVAILISIAWM-LNFGSWNY- 164
Cdd:COG0651 111 PLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMa 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 165 -IFYNDFFPFSWELRIILILIILASMTSSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNFLL----MDL 238
Cdd:COG0651 191 dLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLfgadPAL 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 239 GLSWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGYYEV---AFFHLLTHALFKALLFMCAGSIIH 315
Cdd:COG0651 270 FLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIER 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 316 NVNNcQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILElVSLSWVNFLIFFIYFFSTGLTASHSFRLYY 395
Cdd:COG0651 350 ATGT-RDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQ-AALEAGAWLLAAVLLLSSLLTLAYFVRIFG 427
|
.
gi 219524251 396 Y 396
Cdd:COG0651 428 R 428
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
67-421 |
1.38e-42 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 162.75 E-value: 1.38e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 67 LVIYYSNGYMSGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLV-IYYQNISSYNAGMLTALMNRIG 145
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 146 DVAILISIA---WMLN-------FGSWNYIFYNDFFPFSWeLRIILILIILASMTSSAQIPFSAWLPAAMAAPTPVSALV 215
Cdd:CHL00025 186 DFGLLLGILgfyWITGsfefrdlFEIFNNLIYNNEVNLLF-ATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALI 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 216 HSSTLVTAGVYLLIR-FNF-----LLMDLgLSWIllfvGCLTMFmsgLGANFEF---DLGSIIALSTLSQLGLMFGILSM 286
Cdd:CHL00025 265 HAATMVAAGIFLVARlLPLfivipYIMNL-ISLI----GIITAL---LGATLALaqkDIKRGLAYSTMSQLGYMMLALGI 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 287 GYYEVAFFHLLTHALFKALLFMCAGSIIHNV--------NNCQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYS 358
Cdd:CHL00025 337 GSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWS 416
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 219524251 359 KDLILelvSLSWVNFLIF-FIYFFSTGLTASHSFRLYYYSMFGD-NNYFPVFSFDDSNYYISFSM 421
Cdd:CHL00025 417 KDEIL---NDSWLYSPIFaIIAWSTAGLTAFYMFRIYLLTFEGHlRVHFQNYSGKKNSSFYSISL 478
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
40-364 |
1.54e-41 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 160.59 E-value: 1.54e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 40 NSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVS 119
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 120 YCLvIYYQNISSYNAGMLTALMNRIGDVAILISIAWMLN-FGSWNY--IFYNDFfpfsWE-----LRIILILIILASMTS 191
Cdd:PRK12650 147 FFL-IARSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATqTGTTSLsgILHSDV----WAekpglTTVVAVLIAVAAFTK 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 192 SAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDLGL-SWILLFVGCLTMFMSGLGANFEFDLGSIIA 270
Cdd:PRK12650 222 SAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVwNWLLIIVGMITALMGAVFAVQKTDLKKLTA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 271 LSTLSQLGL---MFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSISFNVSILSL 347
Cdd:PRK12650 302 YSTVSQLGWivaTIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGT-RDIRRLGSLWRRMPFTFVSVTIAALSM 380
|
330
....*....|....*..
gi 219524251 348 CGFPFLAGFYSKDLILE 364
Cdd:PRK12650 381 AAVPPLFGFVSKEGMLT 397
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
51-380 |
5.27e-41 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 158.16 E-value: 5.27e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 51 DWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIY-YQNI 129
Cdd:PRK12647 63 DGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFnHERE 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 130 SSYNAGM------------LTALMNRIGDVAILISIAWMLNFGswNYIFYNDFFPfswelrIILILIILASMTSSAQIPF 197
Cdd:PRK12647 143 AARRAALqallvtgggglaLLAGLILLGNVTGTYSLSELLASG--DVIREHPLYL------AILLLVLGGAFTKSAQFPF 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 198 SAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDLGL-SWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQ 276
Cdd:PRK12647 215 HFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLwQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 277 LGL---MFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVnNCQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFL 353
Cdd:PRK12647 295 LGTlvmLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHET-GTRDITKLGGLRRAMPITAAAALLAALSMAGLPPL 373
|
330 340
....*....|....*....|....*....
gi 219524251 354 AGFYSKDLILE--LVSLSWVNFLIFFIYF 380
Cdd:PRK12647 374 FGFLAKELIYEalLEAPLWSLILTVAAVL 402
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
10-473 |
5.45e-41 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 158.47 E-value: 5.45e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 10 FIFSITVFLFGVYFLLFDYTL---LIEWYLFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFV 86
Cdd:TIGR00940 30 FVLAIPLVCFLYTLGLYPYTAsggVLHYTIDWVPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFY 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 87 FLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYY-QNISSYNAGMLTALMNRIGDVAILISIAWML----NFGS 161
Cdd:TIGR00940 110 AYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWhHRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSI 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 162 WNYIFYNDFFPFSWELRIILILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDL-GL 240
Cdd:TIGR00940 190 DAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTeAW 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 241 SWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMG------------YYEVAF----FHLLTHALFKA 304
Cdd:TIGR00940 270 FWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGspsyhyqgddskIYALAAvaavFHLINHATFKG 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 305 LLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLilelvslswvnfliffiyFFSTG 384
Cdd:TIGR00940 350 SLFMAAGIIDHETGT-RDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEM------------------FFAEA 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 385 LTAShsfRLYYYSMFGDNNYFPVFSFDDSNYYISFS--MIVLLFVSVFGGSLLSWLVFPFPNMILLPmyLKFLVLFTVFM 462
Cdd:TIGR00940 411 ITAH---LVNPFDTVTLGYLFPYVATVASVFTFVYSlrFIHGVFFGRPKPEDLPRKPHEPPRWMLAS--PDILVLLVLVF 485
|
490
....*....|.
gi 219524251 463 GIYFGYLIYSF 473
Cdd:TIGR00940 486 GLFPAQLTGPI 496
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
8-481 |
8.15e-39 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 149.26 E-value: 8.15e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 8 ILFIFSITVFLFGVYFLLFDYTLLIEWYLFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVF 87
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 88 LLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSYNAGMLTALMNRIGDVAILISIAWmlnfgswNYIFY 167
Cdd:MTH00063 81 LIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL-------SCWGG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 168 NDFFPFSwelriilILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDLGLSWILLFV 247
Cdd:MTH00063 154 SGSFLCC-------LFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 248 GCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNCQDIRYLG 327
Cdd:MTH00063 227 LLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVY 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 328 SIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIYFFSTGLTASHSFRLyyYSMFGDNNYFPV 407
Cdd:MTH00063 307 SSILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRL--CLILFGVKSSLS 384
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 219524251 408 FSFDDSNYYISFSMIVLLFVSVFGGSLLSWLVFpfpnmilLPMYLKFLVLFTVFMGIYFGYLIYSFKFGSNIFS 481
Cdd:MTH00063 385 SGVRFLFFNSGLMVFLWLFINYYVFLLLDEVVY-------LGVFISLVLLLVQLLGLLVGVLFYDSNLFSNWSS 451
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
51-364 |
3.33e-38 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 150.29 E-value: 3.33e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 51 DWMSLIFMSFVMFISSLVIYYSNGYMSGEL-NINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIY-YQN 128
Cdd:PRK12646 77 DGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYwYNN 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 129 ISSYNAGMLTALMNRIGDVAILISIAWMLNFGSWNYIF----YNDFFPFSWELRIILILIILASMTSSAQIPFSAWLPAA 204
Cdd:PRK12646 157 GDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeilgQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 205 MAAPTPVSALVHSSTLVTAGVYLLIRFNFLlmdLGLS----WILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLM 280
Cdd:PRK12646 237 MAAPTPVSAYLHSATMVKAGIFLLFRFTPL---LGLSnmyiYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMI 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 281 FGILSMG--------------YYEVAF---FHLLTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSISFNVS 343
Cdd:PRK12646 314 MAMVGIGggyaqhqqdaiasiYVFVLFaalFHLMNHAIFKCALFMGVGIIDHEAGT-RDIRILSGMRQLFPKMNLVMTIA 392
|
330 340
....*....|....*....|.
gi 219524251 344 ILSLCGFPFLAGFYSKDLILE 364
Cdd:PRK12646 393 ALSMAGVPFLNGFLSKEMFLD 413
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
51-400 |
5.80e-36 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 143.79 E-value: 5.80e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 51 DWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNIS 130
Cdd:PRK12648 75 DGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRA 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 131 SYNAGMLTALM-------NRIGDVAILISIAwmlnfGSWNY---------IFYNDFFPfswelrIILILIILASMTSSAQ 194
Cdd:PRK12648 155 DARRGARMALTvtgagglALLAGVLLLGHIV-----GSYDLdvvlaagdlIRAHPLYP------PALVLILLGAFTKSAQ 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 195 IPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDLGL-SWILLFVGCLTMFMSGLGANFEFDLGSIIALST 273
Cdd:PRK12648 224 FPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEwFWIVGGAGLITLLLGAYFALFQHDLKGLLAYST 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 274 LSQLGLM---FGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSISFNVSILSLCGF 350
Cdd:PRK12648 304 ISHLGLItllLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGT-RDMRRLSGLRRLMPITATLAMVAAAAMAGV 382
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 219524251 351 PFLAGFYSKDL----ILELVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMFG 400
Cdd:PRK12648 383 PLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIHDVFFG 436
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
29-364 |
2.11e-35 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 141.99 E-value: 2.11e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 29 TLLIEWylfnLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYM-SGELNINRFVFLLLMFIFSMMFLILSPNLIS 107
Cdd:PRK12644 55 TEVVPW----IPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAMFGLVTSDNLLL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 108 ILLGWDGLGLVSYCLVIYY-QNISSYNAGMLTALMNRIGDVAILISIAWMLNF-GSWNYIFYNDFFPFSWELRIILILII 185
Cdd:PRK12644 131 LYVFWELTTVLSFLLIGHYaERAASRRAALQALLVTTAGGLAMLVGIIILGQAaGTYRLSELLADPPTGPAVSVAVVLIL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 186 LASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDL-GLSWILLFVGCLTMFMSGLGANFEFD 264
Cdd:PRK12644 211 VGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVpVWRPTVLVLGLATMLLGGWRALRQHD 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 265 LGSIIALSTLSQLGLMFGILSMGYYEVAFFHL---LTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSISFN 341
Cdd:PRK12644 291 LKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHSTGT-RDIRKLSGLGRRQPVLAVVAA 369
|
330 340
....*....|....*....|...
gi 219524251 342 VSILSLCGFPFLAGFYSKDLILE 364
Cdd:PRK12644 370 LAAASMAGLPPLLGFVAKEAALE 392
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
7-378 |
2.83e-35 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 138.57 E-value: 2.83e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 7 TILFIFSITVFLFGVYFLLFDYTLLIEWYLFNLNSSSViMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMS-------GE 79
Cdd:PRK06525 31 VLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGDVAL-FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 80 LNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSYNAGMLTALMNRIGDVAILISIAWM-LN 158
Cdd:PRK06525 110 EGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLfLQ 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 159 FGSWNYIFYNDFFPfswELRII-LILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFnflLMD 237
Cdd:PRK06525 190 TGTFALSALSGLHG---SLKYLvFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA---IQS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 238 LG-----LSWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGYY------EVAFFHLLTHALFKALL 306
Cdd:PRK06525 264 MGpiphvIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLF 343
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 219524251 307 FMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLIL----ELVSLSWVNFLIFFI 378
Cdd:PRK06525 344 FLVAGALSYSCGT-RLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFaagfELSVEYWILLPAMVL 418
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
47-364 |
4.17e-33 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 134.67 E-value: 4.17e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 47 TLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGEL-NINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK12645 73 TLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 126 YQN--ISSYNA--GMLTALMNRIGDVAILISIAWMLNFGSWNYIFYN-DFFPFSWELRIILILIILASMTSSAQIPFSAW 200
Cdd:PRK12645 153 WYEreASRYGAqkSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANaDEIQNSPLFIPAMILILLGAFTKSAQFPFYIW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 201 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLL-MDLGLSWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGL 279
Cdd:PRK12645 233 LPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFaGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 280 MFGILSMG------------YYEVAF----FHLLTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPltsISFNVS 343
Cdd:PRK12645 313 IMSLLGIGaaslhyqgddskIYAAAItaaiFHLINHATFKGSLFMIVGIVDHETGT-RDIRKLGGLMTIMP---ITFTIA 388
|
330 340
....*....|....*....|....
gi 219524251 344 I---LSLCGFPFLAGFYSKDLILE 364
Cdd:PRK12645 389 LigaLSMAGLPPFNGFLSKEMFFE 412
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-400 |
1.84e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 130.38 E-value: 1.84e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 47 TLIFDWMSLIFMSFVMFISSLVIYYSNGYmsGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYAIGY--GEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 127 QNISSYNAGMLTALMNRIGDVAILISIAWMLNF-GSWNYIFYNDFFPFSWELRIILILIILASMTSSAQIPFSAWLPAAM 205
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 206 AAPTPVSALVHSSTLVTAGVYLLIRFNFLL------MDLGLSWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLG- 278
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdfrFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGy 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 279 --LMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGF 356
Cdd:PRK08375 310 ilLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGT-RRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGF 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 219524251 357 YSK-DLILELVSLSWVNFLIFFIyfFSTGLTASHSFRLYYYSMFG 400
Cdd:PRK08375 389 VSKwYLVVGAVEAGQWLVLAVLL--ASSLLALLYFLRIWYRAFFG 431
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
39-364 |
5.55e-30 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 125.33 E-value: 5.55e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 39 LNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLV 118
Cdd:PRK12649 67 LPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSIT 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 119 SYCLVIYYQNISSYNAGMLTALMNRIGDVAILIS-------------IAWMLNFGSW-NYIFYNDFFPFSwelriiLILI 184
Cdd:PRK12649 147 SFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAgflllhvitgtydIATILQDSELiENIKGHPLFLIT------LILI 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 185 ILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDLGlSWILLF--VGCLTMFMSGLGANFE 262
Cdd:PRK12649 221 FIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTE-AWFILVsgTGMITMVLAGFLAFRQ 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 263 FDLGSIIALSTLSQLGLMFGILSMGYYE-------VAFFHLLTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPL 335
Cdd:PRK12649 300 TDIKAILAYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAAT-RDIRKLGGLRKEMPI 378
|
330 340
....*....|....*....|....*....
gi 219524251 336 TSISFNVSILSLCGFPFLAGFYSKDLILE 364
Cdd:PRK12649 379 TFIVASIAALAMAGIPPLNGFLSKEMFYE 407
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
390-557 |
8.29e-29 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 112.64 E-value: 8.29e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 390 SFRLYYYSMFGDNNYFPVFSFDDSNYYISFSMIVLLFVSVFGGSLLSWLVFPFPNMILLPMYLKFLVLFTVFMGIYFGYL 469
Cdd:pfam06455 2 SFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGLE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 470 IYSFKfGSNIFSVSYLLMFNFLGLMWFMPNLSSY-CIYYPLGYGYHVSNCIDFGWGELLGGQGLYMYFIYFMDYIYFWYD 548
Cdd:pfam06455 82 LSNLS-NKQLKKSLNFNLHSFSGSMWFFPNLSHRlIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQK 160
|
....*....
gi 219524251 549 SNFKVYLLT 557
Cdd:pfam06455 161 GLIKIYLLS 169
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
46-364 |
1.85e-23 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 104.81 E-value: 1.85e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 46 MTLIFDWMSLIFMSFVMFISSLVIYYSNGY---MSGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCL 122
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 123 VIY-YQNISSYNAGMLTALMNRIGDVAILISIAWM-LNFGSWNYIFYNDFFPfswELRIILILIILASMTSSAQIPFSAW 200
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTGSFELSPLGASAG---ILSLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 201 LPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF--NFLLMDLGLSWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQL 277
Cdd:PRK08667 228 LPYAHpASPSNVSALM-SGVMLKVAVYGLVRFlmDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENI 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 278 GLMF-GI-------------LSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSISFNVS 343
Cdd:PRK08667 307 GIILmGIglyvifgvygldtLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVG 385
|
330 340
....*....|....*....|.
gi 219524251 344 ILSLCGFPFLAGFYSKDLILE 364
Cdd:PRK08667 386 AVSIAALPPFNGFASELLLYE 406
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
57-363 |
4.14e-23 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 103.81 E-value: 4.14e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 57 FMSFVMFISSLVI-YYSNGYMS--GELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISS-Y 132
Cdd:PRK06521 84 FFLLVISLLGAAAsLYSLGYFReyEGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiR 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 133 NAGMLTALMNRIGDVAILISIaWMLNFGSWNYIFYNdffpfsweLRIILILIILASMT---------SSAQI-PFSAWLP 202
Cdd:PRK06521 164 RAGFLYLLMAHAGALAILLAF-GLLARESGSYDFAA--------MRAAHLSPFWASLVfllalfgfgAKAGLvPLHVWLP 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 203 AAM-AAPTPVSALVhSSTLVTAGVYLLIRFNFLLMDLGLSW---ILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLG 278
Cdd:PRK06521 235 RAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWwgvLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIG 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 279 LMF-----GILSMGYYEV---------AFFHLLTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSISFNVSI 344
Cdd:PRK06521 314 IIFvglglAMVFIAYGMPllaalaltaALYHLLNHALFKSLLFLGAGAVLHATGT-RDMEKLGGLIRRMPWTAWAFLIGC 392
|
330
....*....|....*....
gi 219524251 345 LSLCGFPFLAGFYSKDLIL 363
Cdd:PRK06521 393 LAISALPPLNGFVSEWLLL 411
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
53-314 |
8.88e-23 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 102.08 E-value: 8.88e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 53 MSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNissY 132
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPD---R 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 133 NAGMLTA----LMNRIGDVAILISIA-WMLNFGSWNY---IFYNDFFPFSWELRIILILIILASMTSSAQIPFSAWLPAA 204
Cdd:PRK08168 147 PFARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLsalWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 205 MAAPTPVSALVHSStLVTAGVYLLIRFNFLLMDLGLS-WILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGI 283
Cdd:PRK08168 227 MEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLE 305
|
250 260 270
....*....|....*....|....*....|.
gi 219524251 284 LSMGYYEVAFFHLLTHALFKALLFMCAGSII 314
Cdd:PRK08168 306 CGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-400 |
4.27e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 99.66 E-value: 4.27e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 47 TLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK12667 77 VYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYY 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 127 QNIS-SYNAGMLTALMNRIGDVAILISIAWM------LNFGSWNYIFYNDFFPFS--------WELRIILILIILASMTS 191
Cdd:PRK12667 157 RDRGdAVEAAIKYALIGAVGTTLYFLALAFLyatfgtLNMADLSAKIRGLSFPLTgglagnppLALGVALALALWAFTIK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 192 SAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNFLLMDLG---------LSWILLFVGCLTMFMSGLGANF 261
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISpslidfraaLSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 262 EFDLGSIIALSTLSQLGLMFGILSMGY---YEVAFFHLLTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSI 338
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAAGT-RDIDELAGLGRKMPIASF 394
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 219524251 339 SFNVSILSLCGFPFLAGFYSKDLILElvSLSWVNFLIF-FIYFFSTGLTASHSFRLYYYSMFG 400
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFN--ALLESGFYLPaLVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
24-429 |
7.96e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 98.74 E-value: 7.96e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 24 LLFDYTLLIEWYLFNLNSSSVIM--------TLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGEL--NINRFVFLLLMFI 93
Cdd:PRK06589 47 FFFGNILLIDLLFLKGIRAQFELmdfgnysiGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTI 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 94 FSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSYNAGM--LTALMNrigDVAILISIAWMLNFGSWNYIFYNDFF 171
Cdd:PRK06589 127 LIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYkyLKILMI---SALLLFLPAVILIYTKTGNLDFVSGG 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 172 PFSWELRIILILIILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRfnFLLMDLGLSWI-------- 243
Cdd:PRK06589 204 LFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYK--ILLYIFGLSYLqrifaefn 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 244 -LLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFG---ILSMGYYEVAFFHLLTHALFKALLFMCAGSIIhNVNN 319
Cdd:PRK06589 282 wLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLsafILTPKALGAAILHLVSHSFAKICLFYSMGSIY-SLKK 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 320 CQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILELVSLSWVNFLIFFIyffSTGLTASHSFRLYYYSMF 399
Cdd:PRK06589 361 EDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIV---MLVVIASSILSALYLLKI 437
|
410 420 430
....*....|....*....|....*....|
gi 219524251 400 GDNNYFPVFsfdDSNYYISFSMIVLLFVSV 429
Cdd:PRK06589 438 LSSIYKPSL---SENSFITKSLPYLMQISV 464
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
58-387 |
2.82e-21 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 97.67 E-value: 2.82e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 58 MSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSYNAGML 137
Cdd:PRK07390 95 LELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAAR 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 138 TA-LMNRIGDVAILISIAWMLNF-GSWNYifyNDFFPFS-------WELRIILILIILASMTSSAQIPFSAWLPAAMAAP 208
Cdd:PRK07390 175 DAfLTKRVGDLLLLMGVVALSPLaGTLNF---SDLAAWAatanldpLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGP 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 209 TPVSALvHSSTLVTAGVYLLIRFNFLLMdlgLSWI----LLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGIL 284
Cdd:PRK07390 252 NPASIL-RNSVVVATGAWVLIKLQPVLA---LSPValtvLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAV 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 285 SMGYYEVAFFHLLTHALFKALLFMCAGSIIHNvNNCQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSkdlILE 364
Cdd:PRK07390 328 GLQQPDIALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA---LLR 403
|
330 340
....*....|....*....|....
gi 219524251 365 LVSLSWVNFLIFFIYF-FSTGLTA 387
Cdd:PRK07390 404 LADGLWAVSPWLVGVLlLVNALTA 427
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-400 |
1.78e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 88.62 E-value: 1.78e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 51 DWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNI- 129
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTw 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 130 SSYNAGMLTALMNRIGDVAILISIAwmLNFGSWN-----YIFYNDFFPFSWELRIILILIILASMTSSAQIPFSAWLPAA 204
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIA--LLYGQYGtlnmaYLAVKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDA 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 205 M-AAPTPVSALVHSSTLvtAGVYLLIRFNFLLMDLGLS-----WILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLG 278
Cdd:PRK08376 247 YpAAPSSISAMLLVIKQ--AGLYALARVLFSIYGPAINlatvgWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIG 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 279 LMF-----GILSMGYYEV----------AFFHLLTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSISFNVS 343
Cdd:PRK08376 325 YMLlglgvGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT-RNLNELGGLARTMPKTTIAFLIG 403
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 219524251 344 ILSLCGFPFLAGFYSKDLILELVSLswVNFLIFFIYFFSTGLTASHSFRLYYYSMFG 400
Cdd:PRK08376 404 AAAIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
195-364 |
3.23e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 84.23 E-value: 3.23e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 195 IPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDLGLswILLFVGCLTMFMSGLGANFEFDLGSIIALSTL 274
Cdd:PRK07234 201 FVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDL--IVRIFGVGTALLGVLFALLEKDLKRMLAFSTI 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 275 SQLGLmfgILSMGyyEVAFFHLLTHALFKALLFMCAGsIIHNVNNCQDIRYLGSIVYFMPLTSISFNVSilslcGFPFLA 354
Cdd:PRK07234 279 SQLGF---ILAAP--LVGGLYALAHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIPLTMASFSIA-----GFPLLA 347
|
170
....*....|
gi 219524251 355 GFYSKDLILE 364
Cdd:PRK07234 348 GFVSKVLTLK 357
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
36-318 |
8.25e-16 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 80.08 E-value: 8.25e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 36 LFNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNInRFVFLLLMFIFSMMFLI-LSPNLISILLGWdG 114
Cdd:PRK08601 56 LIGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSY-RKYFALFTFTTGFASLAwLSGDLRLMALCW-G 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 115 LGLVSYCLVIYYQNIS--SYNAGMLTALMNRIGDVAILISIAWM-LNFGSWNY--IFYNDFFPF--SWELRIILILIILA 187
Cdd:PRK08601 134 ATLLGLTLLIGLNKGWkvAREAAKISGMLFLISWLALALAIVWLfIATGEWQLtsVLSNENLAQlgTWEKTGINLLLILA 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 188 SMTSSAQIPFSAWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFNFLLMDLGLSWILLFVGCLTMFMsGLGANF-EFDLG 266
Cdd:PRK08601 214 VMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLI-GTGISLvQVDYK 291
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 219524251 267 SIIALSTLSQLGLMFGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVN 318
Cdd:PRK08601 292 RQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN 343
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
82-403 |
3.72e-15 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 78.27 E-value: 3.72e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 82 INRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSYNAGMLTALMNRIGDVAILISIAwmLNFGS 161
Cdd:PRK08377 107 IDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVA--LIYGA 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 162 WNYIFYNDFFPFSWELRIILILIILASM-----TSSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFNFLL 235
Cdd:PRK08377 185 TGTLNMAHIAQLAGTIDPTVAQVGLALLifglaVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLM 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 236 MDL----GLSWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGY---YEVAFFHLLTHALFKALLFM 308
Cdd:PRK08377 264 QNAngwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 309 CAGSIIHNV--NNCQDIRYLGSivyFMPLTSISFNVSILSLCGFPFLAGFYSKDLILeLVSLSWVNFLIFFIYFFSTGLT 386
Cdd:PRK08377 344 AVGYVGITLggTEIEKFEGLGK---RMPLTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVE 419
|
330
....*....|....*..
gi 219524251 387 ASHSFRLYYYSMFGDNN 403
Cdd:PRK08377 420 AVYYFRLIHTMWFKGEG 436
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
8-384 |
1.53e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 76.57 E-value: 1.53e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 8 ILFIFSITVFLFGVYFLLFDYTLLIEWYLFNLNSSSVIMTLIFDWMSLIFMS-----FVMFISSLVIYYSNGYMSGELNI 82
Cdd:PRK08668 16 LAYLLKKINEKIGVIGNALPLLFLIKLYFTLKVGTGEKLTLFFGGFKLTFTLthlswFFAMISLLVIFSVAFFMVSEKTK 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 83 NR--FVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSyNAGMLTALMNRIGDVAILISIAWMLN-F 159
Cdd:PRK08668 96 NDayFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKESR-KASLKYFVLSAIGAYAMLYAIFLIYAkT 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 160 GSWNYI-----FYNDF-FPFSWelrIILILIILASMTSSAQIPFSAWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFN 232
Cdd:PRK08668 175 GTFDFAdisqgLINDTsTGFAL---IVFLFLLAFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 233 FLLMDLGL-------------SWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLG---LMFGILSMGYYEVAFFHL 296
Cdd:PRK08668 251 YVLPGTKLfsefgtyrgvplfNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGyilVGLGLGTSLGFAGGLFHV 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 297 LTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILELVSLSWVNFLIF 376
Cdd:PRK08668 331 FNHALFKGLFFLIFAAVIYRTGT-TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAF 409
|
....*...
gi 219524251 377 FIYFFSTG 384
Cdd:PRK08668 410 MAFFGSIG 417
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
195-356 |
3.17e-14 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 75.63 E-value: 3.17e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 195 IPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNFLLMDLGLSW--ILLFVGCLTMFMSGLGANFEFDLGSIIAL 271
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAPLWWgvALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 272 STLSQLGLMFGILSMGYYEVA--------------FFHLLTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTS 337
Cdd:PRK08042 276 HTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFRTGH-RDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 219524251 338 ISFNVSILSLCGFPFLAGF 356
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGF 373
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
105-363 |
1.94e-13 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 73.00 E-value: 1.94e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 105 LISILLGWDGLGLVSYCLVIYYQNISSYNAGMLTALMNRIGDVAILISIAW-MLNFGSWnyifynDFFPFSWELRIILIL 183
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSF------AFGAIAGLGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 184 IILASMTSSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRfNFLLMDlglswILLFVGCLTMFMSGLGANFEF 263
Cdd:PRK12668 189 ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR-AFPGTE-----LLIYIGAAMAVYGVFFALLEN 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 264 DLGSIIALSTLSQLGLM---FGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSISF 340
Cdd:PRK12668 263 DLRRLLSYHIVSQVGYMvagIGIGTALAINGAVAHAFNHILYKGLLFMSAGAVLYRTGT-EKLTELGGLYRSMPLTALFC 341
|
250 260
....*....|....*....|...
gi 219524251 341 NVSILSLCGFPFLAGFYSKDLIL 363
Cdd:PRK12668 342 LVGALSISAFPLFSGFVSKSMII 364
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
196-432 |
4.36e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 71.65 E-value: 4.36e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 196 PFSAWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFNFLLMDLG---LSWILLFVGCLTMFMSGLGANFEFDLGSIIAL 271
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFALPLFPEAsayFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 272 STLSQLGLMF-GILSMGYYEV--AFFHLLTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSISFNVSILSLC 348
Cdd:COG1008 306 SSVSHMGFVLlGIFALNPLGLqgAVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLAALASL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 349 GFPFLAGFYSKDLIleLVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMFGDNNYFpVFSFDDSNYYISFSMIVLLFVS 428
Cdd:COG1008 385 GLPGTSGFVGEFLV--LLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEE-LAELPDLNPRELAVLAPLAALI 461
|
....
gi 219524251 429 VFGG 432
Cdd:COG1008 462 LLLG 465
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-364 |
8.25e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 64.60 E-value: 8.25e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 193 AQIPFSAWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFNFLLM-DLGLSWILLFVGCLTMFMSGLGANFEFDLGSIIA 270
Cdd:PRK12665 224 AVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFpGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLS 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 271 LSTLSQLGLM-FGIL--SMGYYEVAFFHLLTHALFKALLFMCAGsIIHNVNNCQDIRYLGSIVYFMPLTSISFNVSILSL 347
Cdd:PRK12665 303 FTLVSHIGYMvFGIAlsTVAGLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNL 381
|
170
....*....|....*..
gi 219524251 348 CGFPFLAGFYSKDLILE 364
Cdd:PRK12665 382 GGIPPFSGFIGKVALLE 398
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
51-432 |
1.40e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 63.81 E-value: 1.40e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 51 DWMSLIFMSFVMFISSLVIYYSngYMSGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNIS 130
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILAS--WESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 131 SYNAGMLTALMNRIGDVAILISIAWM--LNFGSWNY-IFYNDFFPFSWELrIILILIILASMTSSAQIPFSAWLPAAMA- 206
Cdd:TIGR01972 154 RIYAAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLlELLNLPLPFGVQT-WLFLAFFIAFAVKVPLFPLHTWLPDAHVe 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 207 APTPVSALVhSSTLVTAGVYLLIRFNFLLM---DLGLSWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGL-MFG 282
Cdd:TIGR01972 233 APTAGSVIL-AGVLLKMGTYGFLRFNLPLFpdaSLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 283 ILSMGY--YEVAFFHLLTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKD 360
Cdd:TIGR01972 312 IFSFNElgISGAVFQMISHGLITAALFLLVGVLYERAHT-RDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 219524251 361 LIleLVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMFGDNNYFPVFSFDDSNYYISFSMIVLLFVSVFGG 432
Cdd:TIGR01972 391 LI--LLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDLNGREIAVLAPLVVLILFLG 460
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
200-363 |
1.47e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 63.82 E-value: 1.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 200 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDL---GLSWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQ 276
Cdd:PRK12663 228 WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQereLLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISS 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 277 LGLM---FGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHnVNNCQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFL 353
Cdd:PRK12663 308 IGFIllgLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPF 386
|
170
....*....|
gi 219524251 354 AGFYSKDLIL 363
Cdd:PRK12663 387 SGFWGKVLLV 396
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
47-359 |
4.04e-10 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 62.06 E-value: 4.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 47 TLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGElNINRFVFLLLMF--IFSMMFLILSPNLISILLGWDGLGLVSYCLV- 123
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERR-GLLRGEFYALLLfaTLGMMLMASANDLLTLFLGLELLSLSLYVLVa 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 124 IYYQNISSYNAGMLTALMNRIGDVAILISIAWMLNF-GSWNYIFYNDFFPFSWELRIILILIILASMTS-----SAqIPF 197
Cdd:COG1007 144 FRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGAtGSLNLAGIAAALAAGGANSPLLLLGLVLVLAGlafklSA-VPF 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 198 SAWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIR-FNFLLMDLGLSW--ILLFVGCLTMFMSGLGANFEFDLGSIIALS 272
Cdd:COG1007 223 HMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRlLVEAFPGLAADWqlLLAVLAVLSMTVGNLAALAQTNVKRMLAYS 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 273 TLSQLG-LMFGILSMGY--YEVAFFHLLTHALFKALLFMCAGSIIHNVNNCQDIRYLGSIVYFMPLTSISFNVSILSLCG 349
Cdd:COG1007 301 SIAHAGyLLLGLAAGTPlgVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAG 380
|
330
....*....|
gi 219524251 350 FPFLAGFYSK 359
Cdd:COG1007 381 IPPTAGFFGK 390
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
190-401 |
5.76e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 58.42 E-value: 5.76e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 190 TSSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFNFLLM--DLGLS-WILLFVGCLTMFMSGLGANFEFDL 265
Cdd:PRK07691 221 TKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFshDTSFThYLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 266 GSIIALSTLSQLGLM-FGILSMGYYEV--AFFHLLTHALFKALLFMCAGSIIHnVNNCQDIRYLGSIVYFMPLTSISFNV 342
Cdd:PRK07691 300 KKIIIYNIMIAVGVIlVGVAMMTESGMigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFI 378
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 219524251 343 SILSLCGFPFLAGFYSKDLILElVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMFGD 401
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWGE 436
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
196-363 |
1.70e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 53.78 E-value: 1.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 196 PFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNFL----LMDLGLSWILLFVGCLTMFMSGLGANFEFDLGSIIA 270
Cdd:PRK06458 232 PMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILidaaIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFA 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 271 LSTLSQLGLM---FGILSMGYYEVAFFHLLTHALFKALLFMCAGSIIHnVNNCQDIRYLGSIVYFMPLTSISFNVSILSL 347
Cdd:PRK06458 311 YSSIEHMGLIafaLGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQ-KYGTRDINVIRGLLKVSPLTGWGLMLGALAI 389
|
170
....*....|....*.
gi 219524251 348 CGFPFLAGFYSKDLIL 363
Cdd:PRK06458 390 AGMPPFGVFISEFLIL 405
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-359 |
2.56e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 53.20 E-value: 2.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 193 AQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-------NFLLMDLGLSWILLFVGCLTMFMSGLGANFEFDL 265
Cdd:PRK12662 224 ALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDI 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 266 GSIIALSTLSQLGLMFGILSMGYYE---VAFFHLLTHALFKALLFMCAGSIIHNVNNCqDIRYLGSIVYFMPLTSISFNV 342
Cdd:PRK12662 304 KRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGTT-KLEDCLNLWKSMPKITLAFVL 382
|
170
....*....|....*..
gi 219524251 343 SILSLCGFPFLAGFYSK 359
Cdd:PRK12662 383 LSLSLIGMPPTSGFVAK 399
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
192-380 |
9.54e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 51.68 E-value: 9.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 192 SAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNFLLMDLGL----SWILLFVGCLTMFMSGLGANFEFDLG 266
Cdd:PRK08676 220 SGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAaeqfSNVLIGLGIFSIAVAAFSMLSQRNLK 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 267 SIIALSTLSQLGLMFGILSMGYYEVAF---FHLLTHALFKALLFMCAGsIIHNVNNCQDIRYLGSIVYFMPLTSISFNVS 343
Cdd:PRK08676 299 KLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVILG 377
|
170 180 190
....*....|....*....|....*....|....*....
gi 219524251 344 ILSLCGFPFLAGFYSKDLIL-ELVSLS-WVNFLIFFIYF 380
Cdd:PRK08676 378 SAAIIGMPPFPLFLSKFFILlQLGGISvWLVLAVLLLLL 416
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
195-401 |
2.49e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 50.20 E-value: 2.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 195 IPFSAWLPAAMA-APTPVSALvHSSTLVTAGVYLLIRFN---FLLMDLGLSWILLFVGCLTMFMSGLGANFEFDLGSIIA 270
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSlplFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 271 LSTLSQLG-LMFGILSMGYYEV--AFFHLLTHALFKALLFMCAGSIIHNVNNcQDIRYLGSIVYFMPLTSISFNVSILSL 347
Cdd:PRK05846 307 YSSISHMGfVTLGIFAGNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLHT-RDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 219524251 348 CGFPFLAGFYSKDLIleLVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMFGD 401
Cdd:PRK05846 386 LGLPGTSGFVGEFLI--LLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGP 437
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
4-364 |
4.66e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 49.26 E-value: 4.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 4 LLFTILFIFSITVFLFGVYFLLFDYTLLIewylfnlnsssvimTLIFDWMSLIFMSFVMFISSLVIYYsngYMSGELNIN 83
Cdd:PRK06277 38 LLPILPFLASYGYYYFGGHGLVNGYHSGI--------------TYLFNPAKQIIIFVLSLIASLVLIT---GLGEKKSSG 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 84 RFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNISSYNAGMLTALMNRIG------DVAILISIAWML 157
Cdd:PRK06277 101 LYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAgsilllGIGFLLASTGTL 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 158 NFGSWNYIFYNDffPFSWELRIILILIILASMTSSAQIPFSAWLPAAMAAPTP-VSALVHSS---TLVTAGVYLLIRFNF 233
Cdd:PRK06277 181 NITDIHNALLVN--PTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPfGSALLQTFskfVLVALMLVIFKLFGG 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 234 LLMDLGLSWILLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMFGILSMGY---YEVAFFHLLTHALFKALLFMCA 310
Cdd:PRK06277 259 LSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTplgIVAGIFHAINHVIYKSALFLGA 338
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 219524251 311 GsIIHNVNNCQDIRYLGSIVYFMPLTSISFNVSILSLCGFPFLAGFYSKDLILE 364
Cdd:PRK06277 339 G-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
47-359 |
2.20e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 47.12 E-value: 2.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 47 TLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMfIFSMMFLILSPNLISILLGWDGLGLVSYCLVIY- 125
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLEDRGRGEFYLLVLFA-LLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 126 YQNISSYNAGMLTALMNRIGDVAILISIAwMLNFGSWNYIFYNDFFPFSWELRIILILIILASMTSSA------QIPFSA 199
Cdd:PRK05777 147 RDRRRSLEAAIKYFVLGALASGFLLYGMS-LLYGATGSLSFAGIAKALADGSGNSLLLLFGLVFLLVGlafklsAVPFHM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 200 WLPAAM-AAPTPVSALVHSSTLVtAGVYLLIR-FNFLLMDLGLSW--ILLFVGCLTMFMSGLGANFEFDLGSIIALSTLS 275
Cdd:PRK05777 226 WTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRlLVVAFGGLSEDWqqVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 276 QLG-LMFGILSMGY--YEVAFFHLLTHALFKALLFMCAGSIIHNVNNCQDIRYLGSIVYFMPLTSISFNVSILSLCGFPF 352
Cdd:PRK05777 305 HAGyLLVGLAAGTAegYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPP 384
|
....*..
gi 219524251 353 LAGFYSK 359
Cdd:PRK05777 385 TAGFWGK 391
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
37-85 |
5.13e-05 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 40.87 E-value: 5.13e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 219524251 37 FNLNSSSVIMTLIFDWMSLIFMSFVMFISSLVIYYSNGYMSGELNINRF 85
Cdd:pfam00662 2 LSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-440 |
2.04e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 43.95 E-value: 2.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 193 AQIPFSAWLPAAMAAPTPVSALVHSstLVTAGVYLLIrfnFLLMDLGLSwILLFVGCLTMFMSGLGANFEFDLGSIIALS 272
Cdd:PRK12664 159 ACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV---LLLFFSGEE-ILLFLGIITAIYGIIFASLEQNIRRLLCYN 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 273 TLSQLGLMFGILSMGY-----YEVAFFHLLTHALFKALLFMCAGSIIHNVNNCQDIRYLGsiVYFMPLTSISFNVSILSL 347
Cdd:PRK12664 233 VVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGG--LFKMSLEAMCCIIAILNM 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 348 CGFPFLAGFYSKDLILELVSLSWVNFLIFFIYF--FSTGLTASHSFRLYYYSMFGDNNYFPVFSfdDSNYYISFSMIVLL 425
Cdd:PRK12664 311 GAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFliCSLLLFASVGLKFFWYAFISKSKSKPEAE--KVYIGSKLSMIILV 388
|
250
....*....|....*
gi 219524251 426 FVSVFGGSLLSWLVF 440
Cdd:PRK12664 389 LICVVLGMFNSYLLF 403
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
194-447 |
1.59e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 41.20 E-value: 1.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 194 QIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDLG---LSWILLFVGCLTMFMSGLGANFEFDLGSIIA 270
Cdd:MTH00204 225 QIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAAseyFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIA 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 271 LSTLSQLGLM-FGILS--MGYYEVAFFHLLTHALFKALLFMcAGSIIHNVNNCQDIRYLGSIVYFMPLTSISFNVSILSL 347
Cdd:MTH00204 305 YSSVAHMGLVpLGLFThtIEGLVAAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLAN 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 348 CGFPFLAGFYSKDLILelvsLSWVNFLIFFIYFFSTGLTASHSFRLYYYS--MFGDNNYFPVFSFDDSNYYIsFSMIVLL 425
Cdd:MTH00204 384 MGFPLSCNFVGEFFSL----LAAFEYSLGLGVLVTSGMVWSAAYSLYLYNriSFGGGSNYLLFSRDLNRREL-LAILPLI 458
|
250 260
....*....|....*....|..
gi 219524251 426 FVSVFGGSLLSWLVFPFPNMIL 447
Cdd:MTH00204 459 IAIFLLGIVPFIIIDLVKNSLV 480
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-359 |
2.00e-03 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 40.76 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 51 DWMSLIFMSFVMFISSLVIYYSNGYM-SGELNINRFVFLLLMFIFSMMFLILSPNLISILLGWDGLGLVSYCLVIYY-QN 128
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 129 ISSYNAGMLTALMNRIGDVAILISIAWM--LNFGSWNYIFYNDFFPFSWELRIILILIILASMT-----SSAQIPFSAWL 201
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLygLSGGEIELQEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPFHQWT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 202 PAAM-AAPTPVSALVhSSTLVTAGVYLLIR-FNFLLMDLGLSWILLF--VGCLTMFMSGLGANFEFDLGSIIALSTLSQL 277
Cdd:CHL00049 238 PDVYeGSPTPVVAFL-SVTSKVAASALATRiFDIPFYFSSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAYSSIGQI 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 278 G-LMFGILSmGYYEVAFFHLLTHALFkaLLFMCAGS----IIHNVNNCQD-IRYLGSIVYFMPLTSISFNVSILSLCGFP 351
Cdd:CHL00049 317 GyVIIGIIV-GDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIP 393
|
....*...
gi 219524251 352 FLAGFYSK 359
Cdd:CHL00049 394 PLAGFFGK 401
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
196-426 |
7.94e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 39.13 E-value: 7.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 196 PFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDLG---LSWILLFVGCLTMFMSGLGANFEFDLGSIIALS 272
Cdd:MTH00226 248 PFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGaqnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYS 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 273 TLSQLGLMFGIL---SMGYYEVAFFHLLTHALFKALLFMCAgSIIHNVNNCQDIRYLGSIVYFMPLTSISFNVSILSLCG 349
Cdd:MTH00226 328 SVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVA 406
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 219524251 350 FPFLAGFYSKDLILeLVSLSWvNFLIFFIYFFSTGLTASHSFRLYYYSMFGDNNYFPVFSFD--DSNYYISFSMIVLLF 426
Cdd:MTH00226 407 VPPSGNFIGEYLSI-LSSFNW-NPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDvnRREFYITASMVFFAF 483
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
57-364 |
8.61e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.00 E-value: 8.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 57 FMSFVMFISSLVIYYSNGYMSGELNINRFVFLLLMF-IFSMMFLILSPNLISILLGWDGLGLVSYCLVIYYQNiSSYNAG 135
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLSSLYILtILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 136 MLTALmNRIGDVAILISIAWMLNF-GSWNYIFYNDFFPFswelriilILIILASMTSSAQIPF--SAWLPAAMAAPTPVS 212
Cdd:PRK06459 124 VFMAF-GELSTVLILAGFAWAFIIsGTTNFSYLPSPVPL--------ILASFGFIIKMGMMPFlvSEWLPIAHGNAPSNF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 213 ALVHSSTLVTAGVYLLIRFNFLLMDLGLSWI---LLFVGCLTMFMSGLGANFEFDLGSIIALSTLSQLGLMfgILSMGYY 289
Cdd:PRK06459 195 SAILSATMTLMGVYGILKMTILTQTIPIGYFgltILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAI--LVALGLY 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 290 EVA---------------FFHLLTHALFKALLFMCAGSIihnvnNCQDIRYLGSIVYFMplTSISFNVSILSLCGFPFLA 354
Cdd:PRK06459 273 MVTkqlitsiehfslitvILYSFAHSVAKTGLFLSSGLQ-----EKQSITYSKKIRNRW--IELGLTLLASSLSGLLPNI 345
|
330
....*....|
gi 219524251 355 GFYSKDLILE 364
Cdd:PRK06459 346 GGVASWLLLE 355
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
194-427 |
8.68e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 38.88 E-value: 8.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 194 QIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNFLLMDLG---LSWILLFVGCLTMFMSGLGANFEFDLGSIIA 270
Cdd:MTH00217 222 KIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEAseyFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIA 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 271 LSTLSQLGLM-FGILS--MGYYEVAFFHLLTHALFKALLFMcAGSIIHNVNNCQDIRYLGSIVYFMPLTSISFNVSILSL 347
Cdd:MTH00217 302 YSSVAHMGLVtLGIFShtIQGLVAAIFLMLAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLAN 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524251 348 CGFPFLAGFYSKdlILELVSLSWVNFLIFFIYFFSTGLTASHSFRLYYYSMFGDNNYFPVFSFDDS--NYYISFSMIVLL 425
Cdd:MTH00217 381 ASIPLSCNFVGE--FLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSRDLNrrEFYVLLPLVFLI 458
|
..
gi 219524251 426 FV 427
Cdd:MTH00217 459 YL 460
|
|
| |
