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Conserved domains on  [gi|306960095|ref|YP_003875512|]
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ATP synthase F0 subunit 6 (mitochondrion) [Ellipes minuta]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 4.60e-104

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 299.78  E-value: 4.60e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095   1 MANLFSSFDPSTSiFSLSLNWLSTFLGILIIPTTFWLLPNRTGTLWHKINLTLFKEFKVLMGPSgHKGTLLIFISLFSLI 80
Cdd:MTH00157   2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  81 MFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGTLAVR 160
Cdd:MTH00157  80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 306960095 161 LAANMIAGHLLLTLLGNNGPSLSMLMIQLLIISQIALLVLESAVAFIQAYVFTVLATLYSTEVT 224
Cdd:MTH00157 160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 4.60e-104

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 299.78  E-value: 4.60e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095   1 MANLFSSFDPSTSiFSLSLNWLSTFLGILIIPTTFWLLPNRTGTLWHKINLTLFKEFKVLMGPSgHKGTLLIFISLFSLI 80
Cdd:MTH00157   2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  81 MFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGTLAVR 160
Cdd:MTH00157  80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 306960095 161 LAANMIAGHLLLTLLGNNGPSLSMLMIQLLIISQIALLVLESAVAFIQAYVFTVLATLYSTEVT 224
Cdd:MTH00157 160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-222 3.96e-50

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 162.76  E-value: 3.96e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095    4 LFSSFDPST-SIFSLSLNWLSTFLGILII----PTTFWLLPNRTGTLWHKINLTLFKEFKVLMGPSGHKGTLLIFiSLFS 78
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095   79 LIMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGTLA 158
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 306960095  159 VRLAANMIAGHLLLTLLGNNGPSL-SMLMIQLLIISQIALLVLESAVAFIQAYVFTVLATLYSTE 222
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLmSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 67-219 4.70e-42

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 139.84  E-value: 4.70e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  67 KGTLLIFISLFSLIMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIE 146
Cdd:cd00310    2 KKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIE 81

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 306960095 147 TISNSIRPGTLAVRLAANMIAGHLLLTLLGNNGPSLSMLMIQLLIISQIALLVLESAVAFIQAYVFTVLATLY 219
Cdd:cd00310   82 LISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVY 154
ATP-synt_A pfam00119
ATP synthase A chain;
61-219 1.19e-27

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 104.49  E-value: 1.19e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095   61 MGPSGHKGTLLIFISLFSLIMFNNALGLF---PYVFTSSSHMSMTFALALPLWLSFMLFGWINH-ANHMFAHLVPQGTPG 136
Cdd:pfam00119  49 IGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPL 128

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  137 VLMPFMVCIETISNSIRPGTLAVRLAANMIAGHLLLTLLGNNGPSLSMLMIQLLIIS---QIALLVLESAVAFIQAYVFT 213
Cdd:pfam00119 129 PLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIPpllGVAWTLFELLVAFIQAYVFT 208


                  ....*.
gi 306960095  214 VLATLY 219
Cdd:pfam00119 209 MLTAVY 214
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 61-219 1.16e-21

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 88.59  E-value: 1.16e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  61 MGPSGHKGTLLIFiSLFSLIMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINH-ANHMFAHLVPQGTPgVLM 139
Cdd:COG0356   50 IGKKGRKFAPLLL-TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLA 127

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095 140 PFMVCIETISNSIRPGTLAVRLAANMIAGHLLLTLLGNNGPSLSMLMIQLLIisQIALLVLESAVAFIQAYVFTVLATLY 219
Cdd:COG0356  128 PLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 4.60e-104

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 299.78  E-value: 4.60e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095   1 MANLFSSFDPSTSiFSLSLNWLSTFLGILIIPTTFWLLPNRTGTLWHKINLTLFKEFKVLMGPSgHKGTLLIFISLFSLI 80
Cdd:MTH00157   2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  81 MFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGTLAVR 160
Cdd:MTH00157  80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 306960095 161 LAANMIAGHLLLTLLGNNGPSLSMLMIQLLIISQIALLVLESAVAFIQAYVFTVLATLYSTEVT 224
Cdd:MTH00157 160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-224 6.62e-52

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 167.52  E-value: 6.62e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095   1 MANLFSSFDPSTSIF--SLSLNWLSTFLGILIIPTTFWLLPNRTGTLWHKINlTLFKEFKVLMGPSGHKGTLLIFISLFS 78
Cdd:MTH00176   2 LVDLFSSFDPPNKNIfsMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFS-TFLPEMILRSNGSYILGSASIIISLFI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  79 LIMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGTLA 158
Cdd:MTH00176  81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 306960095 159 VRLAANMIAGHLLLTLLGNNGPSLSMLMI---QLLIISQIALLVLESAVAFIQAYVFTVLATLYSTEVT 224
Cdd:MTH00176 161 VRLAANLSAGHLLLGLLGAAMWGLLPVSPligFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-222 3.96e-50

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 162.76  E-value: 3.96e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095    4 LFSSFDPST-SIFSLSLNWLSTFLGILII----PTTFWLLPNRTGTLWHKINLTLFKEFKVLMGPSGHKGTLLIFiSLFS 78
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095   79 LIMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGTLA 158
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 306960095  159 VRLAANMIAGHLLLTLLGNNGPSL-SMLMIQLLIISQIALLVLESAVAFIQAYVFTVLATLYSTE 222
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLmSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 67-219 4.70e-42

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 139.84  E-value: 4.70e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  67 KGTLLIFISLFSLIMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIE 146
Cdd:cd00310    2 KKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIE 81

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 306960095 147 TISNSIRPGTLAVRLAANMIAGHLLLTLLGNNGPSLSMLMIQLLIISQIALLVLESAVAFIQAYVFTVLATLY 219
Cdd:cd00310   82 LISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVY 154
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-222 2.01e-41

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 140.64  E-value: 2.01e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095   1 MANLFSSFDPSTSIF----SLSLNWLSTFLGILIIPTTFWLLPNRTGTLWHKINLTLFKEFKVLMGpSGHKGTLLIFISL 76
Cdd:MTH00005   2 LTDIFSSFDPATNSLfnnlSSTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISAL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  77 FSLIMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGT 156
Cdd:MTH00005  81 FTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPIT 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 306960095 157 LAVRLAANMIAGHLLLTLLGNNGPSL---SMLMIQLLIISQIALLVLESAVAFIQAYVFTVLATLYSTE 222
Cdd:MTH00005 161 LSFRLAANMSAGHIVLSLIGIYAASAlfsSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-224 2.41e-40

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 137.65  E-value: 2.41e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095   1 MANLFSSFDpSTSIFSLSLNWLSTFLGILIIPT-TFWLLPNRTGTLWHKINLTLFKEFKVLMGPSGHKGTLlIFISLFSL 79
Cdd:MTH00120   2 NLNFFDQFS-SPELLGIPLILLAMLIPALLIPSpKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWAL-ILTSLMLL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  80 IMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGTLAV 159
Cdd:MTH00120  80 LLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGV 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 306960095 160 RLAANMIAGH-------LLLTLLGNNGPSLSMLMIQLLIIsqiaLLVLESAVAFIQAYVFTVLATLYSTEVT 224
Cdd:MTH00120 160 RLTANLTAGHlliqlisTATLNLLPTMPTLSLLTLIILLL----LTILELAVAMIQAYVFVLLLSLYLQENT 227
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 2-219 7.25e-39

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 133.95  E-value: 7.25e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095   2 ANLFSSFDPSTsIFSLSLNWLSTFLGI---LIIPTTFWLlPNRTGTLWHKINLTLFKEFKVLMGPSGHKGTLLIFiSLFS 78
Cdd:MTH00035   5 NSIFGQFSPDT-ILFIPLTLLSSVIALswlFFINPTNWL-PSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLT-TVFI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  79 LIMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGTLA 158
Cdd:MTH00035  82 LILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALG 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 306960095 159 VRLAANMIAGHLLLTLLGN------NGPSLSMLMIQLLIIsqiaLLVLESAVAFIQAYVFTVLATLY 219
Cdd:MTH00035 162 LRLAANLTAGHLLIFLLSTaiwelsNSPLISIITLIIFFL----LFILEIGVACIQAYVFTALVHFY 224
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-222 1.38e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 133.15  E-value: 1.38e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095   1 MANLFSSFDpSTSIFSLSLNWLSTFLGILIIPT-TFWLLPNRTGTLWHKINLTLFKEFKVLMGPSGHKGtLLIFISLFSL 79
Cdd:MTH00179   2 MLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSlTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKW-AVLFLSLMLF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  80 IMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGTLAV 159
Cdd:MTH00179  80 LLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGV 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 306960095 160 RLAANMIAGHLLLTLLGNNGPSLSMLMIQLLIISQ---IALLVLESAVAFIQAYVFTVLATLYSTE 222
Cdd:MTH00179 160 RLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLlvlFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-222 7.11e-37

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 128.83  E-value: 7.11e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095   1 MANLFSSFDPSTSIFSL--SLNWLSTFLGILIIPTTFWLLPNRTGTLWHKINLTLFKEFKVLMGpSGHKGTLLIFISLFS 78
Cdd:MTH00173   2 MVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSG-LNLGGFSLLLSSLFL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  79 LIMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGTLA 158
Cdd:MTH00173  81 FLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLT 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 306960095 159 VRLAANMIAGHLLLTLLGN-------NGPSLSMLmiqLLIISQIALLVLESAVAFIQAYVFTVLATLYSTE 222
Cdd:MTH00173 161 VRLLANISAGHIVLTLIGNylssslfSSSVVSLL---LVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 3-219 8.60e-35

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 123.14  E-value: 8.60e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095   3 NLFSSFDPSTsIFSLSLNWLSTFLGILIIPTTFWLLPNRTGTLWHK-INLTLfkefKVLMGPSGHKGTL--LIFISLFSL 79
Cdd:MTH00101   4 NLFASFITPT-ILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWlIQLTS----KQMMTIHNTKGQTwsLMLMSLILF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  80 IMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGTLAV 159
Cdd:MTH00101  79 IGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 306960095 160 RLAANMIAGHLLLTLLGNNG---PSLSMLMIQLLIISQIALLVLESAVAFIQAYVFTVLATLY 219
Cdd:MTH00101 159 RLTANITAGHLLIHLIGGATlalMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-222 5.45e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 121.23  E-value: 5.45e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095   1 MANLFSSFdPSTSIFSLSLNWLSTFLGILIIPT-TFWLLPNRTGTLWHKINLTLFKEFKVLMGPSGHKGTLlIFISLFSL 79
Cdd:MTH00073   2 NLSFFDQF-LSPTLLGIPLIMLAMLLPWLLFPTpTNKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWAL-ILTSLMVF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  80 IMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGTLAV 159
Cdd:MTH00073  80 LITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGV 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 306960095 160 RLAANMIAGHLLLTLLGNNGPSLSMLMIQLLIISQIALL---VLESAVAFIQAYVFTVLATLYSTE 222
Cdd:MTH00073 160 RLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFlltLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 61-222 2.29e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 119.59  E-value: 2.29e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  61 MGPSGHKGTLLiFISLFSLIMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMP 140
Cdd:MTH00132  62 LNVGGHKWALL-LTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIP 140

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095 141 FMVCIETISNSIRPGTLAVRLAANMIAGHLLLTLLGNNGPSLSMLMIQLLIISQIALL---VLESAVAFIQAYVFTVLAT 217
Cdd:MTH00132 141 VLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFlltLLEVAVAMIQAYVFVLLLS 220


                 ....*
gi 306960095 218 LYSTE 222
Cdd:MTH00132 221 LYLQE 225
ATP-synt_A pfam00119
ATP synthase A chain;
61-219 1.19e-27

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 104.49  E-value: 1.19e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095   61 MGPSGHKGTLLIFISLFSLIMFNNALGLF---PYVFTSSSHMSMTFALALPLWLSFMLFGWINH-ANHMFAHLVPQGTPG 136
Cdd:pfam00119  49 IGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPL 128

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  137 VLMPFMVCIETISNSIRPGTLAVRLAANMIAGHLLLTLLGNNGPSLSMLMIQLLIIS---QIALLVLESAVAFIQAYVFT 213
Cdd:pfam00119 129 PLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIPpllGVAWTLFELLVAFIQAYVFT 208


                  ....*.
gi 306960095  214 VLATLY 219
Cdd:pfam00119 209 MLTAVY 214
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 13-219 1.08e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 100.08  E-value: 1.08e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  13 SIFSLSLNWLSTF----LGILIIPTTFWLL-------PNRTGTLWHKINLTLFKEFKVLMGPSGHKGTLLIFiSLFSLIM 81
Cdd:MTH00175  16 TIQAFLGDWLVTFtnssMMMVLAVIIFWLLlkgdkliPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFIL-SLFLFIA 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  82 FNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGTLAVRL 161
Cdd:MTH00175  95 ILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRL 174

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 306960095 162 AANMIAGHLLLTLLgnNGPSLSMLMIQLLIISQIALL------VLESAVAFIQAYVFTVLATLY 219
Cdd:MTH00175 175 AANISAGHLLFAIL--SGFAFNMLSNGLIILSLFPMLimifitLLEMAVAVIQAYVFCLLTTIY 236
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 14-219 1.95e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 96.65  E-value: 1.95e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  14 IFSLSLNWLSTFLGILIIPTTFWLLPNRTGTLWHKINLTLFKEFKVLMGPSGHKGTLLIfISLFSLIMFNNALGLFPYVF 93
Cdd:MTH00172  17 LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVF 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  94 TSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGTLAVRLAANMIAGHLLLT 173
Cdd:MTH00172  96 TPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFA 175

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 306960095 174 LLGNNGPSL---SMLMIQLLIISQIALLVLESAVAFIQAYVFTVLATLY 219
Cdd:MTH00172 176 ILAGFGFNMlcaSGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIY 224
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 61-219 1.16e-21

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 88.59  E-value: 1.16e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  61 MGPSGHKGTLLIFiSLFSLIMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINH-ANHMFAHLVPQGTPgVLM 139
Cdd:COG0356   50 IGKKGRKFAPLLL-TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLA 127

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095 140 PFMVCIETISNSIRPGTLAVRLAANMIAGHLLLTLLGNNGPSLSMLMIQLLIisQIALLVLESAVAFIQAYVFTVLATLY 219
Cdd:COG0356  128 PLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 37-219 2.17e-17

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 78.06  E-value: 2.17e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  37 LLPNRTGTLWHKINLTLFKEFKVLMGPSGhKGTLLIFISLFSLIMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLF 116
Cdd:MTH00174  59 LVPNRILVGLELIYSHFYTVLKDNLGNKG-GNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLA 137

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095 117 GWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSIRPGTLAVRLAANMIAGHLLLTLLGNNGPSLSMLMIQLLIISQIA 196
Cdd:MTH00174 138 GLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPFA 217

                        170       180
                 ....*....|....*....|....*..
gi 306960095 197 LL----VLESAVAFIQAYVFTVLATLY 219
Cdd:MTH00174 218 ILifvtILEMAVAIIQAYVFTLLTIVY 244
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 61-219 6.87e-17

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 76.37  E-value: 6.87e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  61 MGPSGHKGTLLIFiSLFSLIMFNNALGLFP-YVFTSSSHMSMTFALALPLWLSFMLFG-WINHANHMFAHLVPQgtpgvL 138
Cdd:PRK05815  65 IGGKGKKFAPLAF-TLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQ-----P 138

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095 139 MPFMVCIETISNSIRPGTLAVRLAANMIAGHLLLTLLGNNGPSLSMLMIqLLIISQIALLVLESAVAFIQAYVFTVLATL 218
Cdd:PRK05815 139 HPLLLPIEIISEFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLAL-APLILPVAWTIFEIFVGTLQAYIFMMLTIV 217


                 .
gi 306960095 219 Y 219
Cdd:PRK05815 218 Y 218
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 74-219 2.51e-11

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 62.07  E-value: 2.51e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  74 ISLFSLIMFNNALGLFPYVFTSSSHMSMTFALALplwLSFMLFGWINHANH----MFAHLVpQGTPGVLMPFMVCIETIS 149
Cdd:PRK13419 175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAIKAHgikgYLAHLT-GGTHWSLWIIMIPIEFIG 250

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095 150 NSIRPGTLAVRLAANMIAGHLLLtllgnngpsLSMLMIQLLIISQIALLV-----------LESAVAFIQAYVFTVLATL 218
Cdd:PRK13419 251 LFTKPFALTVRLFANMTAGHIVI---------LSLIFISFILKSYIVAVAvsvpfaifiylLELFVAFLQAYIFTMLSAL 321


                 .
gi 306960095 219 Y 219
Cdd:PRK13419 322 F 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 94-219 9.52e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 54.51  E-value: 9.52e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  94 TSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETISNSI-RPGTLAVRLAANMIAGHLLL 172
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIVSPMaKTFALTVRLLANMTAGHVII 296

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 306960095 173 T-LLGNNGPSLSMLMIQLLIISQIALLVLESAVAFIQAYVFTVLATLY 219
Cdd:PRK13417 297 LaLMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 48-222 4.58e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 45.74  E-value: 4.58e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  48 KINLTLFKEFKVLMGPSGHKGTLL----IFISLFSLIMFNNALGLFPYVFTSSSHMSMTFALALPLWLSFMLFGWINhaN 123
Cdd:MTH00087  26 MLNVLVKKFFGLLIIVFSYSNKLPlssvISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSK--S 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095 124 HMFAHLVPQGTPGVLMPF-MVCIETISNSIRPGTLAVRLAANMIAGHLLLTLLGNNGPSLSMLMiqlliisqIALLVLES 202
Cdd:MTH00087 104 EKFSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLTVNLMVGHLISSLLNFLGEKYVWLS--------ILAIMMEC 175

                        170       180
                 ....*....|....*....|
gi 306960095 203 AVAFIQAYVFTVLATLYSTE 222
Cdd:MTH00087 176 FVAFIQSYIFSRLIYLYLNE 195
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 22-219 3.43e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 43.58  E-value: 3.43e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  22 LSTFLGILIIPTTFWLLPNRTGTLWHKINLTLFKEFKVLMgpSGHKGTLLIFI-SLFSLIMFNNALGLFPYVFTSSSHMS 100
Cdd:PRK13420  28 IVLVLASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVL--PRHARLVLPFVgTLWIFILVANLIGLIPGFHSPTADLS 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095 101 MTFALALPLWLSFMLFG-----WINHANHmfaHLVPqgTPgVLMPFMVcietISNSIRPGTLAVRLAANMIaghllltll 175
Cdd:PRK13420 106 VTAALALLVFFSVHWFGiraegLREYLKH---YLSP--SP-FLLPFHL----ISEITRTLALAVRLFGNIM--------- 166

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 306960095 176 gnngpSLSMLMIQLLII----SQIALLVLESAVAFIQAYVFTVLATLY 219
Cdd:PRK13420 167 -----SLELAALLVLLVagflVPVPILMLHIIEALVQAYIFGMLALIY 209
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 70-168 3.22e-04

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 39.87  E-value: 3.22e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960095  70 LLIFISLFSLIMFNnalglFPYVFTSSSHMSMTFALALPLWLSFMLFGWINHANHMFAHLVPQGTPGVLMPFMVCIETIS 149
Cdd:MTH00050  28 VVLFIVLFLFLLYR-----LPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETIS 102

                         90
                 ....*....|....*....
gi 306960095 150 NSIRPGTLAVRLAANMIAG 168
Cdd:MTH00050 103 YIIRPVVLILRPFINISLG 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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