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Conserved domains on  [gi|422933831|ref|YP_007003884|]
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membrane protein ORF64 [Cyprinid herpesvirus 2]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Nucleoside_tran super family cl15430
Nucleoside transporter; This is a family of nucleoside transporters. In mammalian cells ...
 361-720 3.95e-11

Nucleoside transporter; This is a family of nucleoside transporters. In mammalian cells nucleoside transporters transport nucleoside across the plasma membrane and are essential for nucleotide synthesis via the salvage pathways for cells that lack their own de novo synthesis pathways. Also in this family is mouse and human nucleolar protein HNP36, a protein of unknown function; although it has been hypothesized to be a plasma membrane nucleoside transporter.


The actual alignment was detected with superfamily member TIGR00939:

Pssm-ID: 472807  Cd Length: 437  Bit Score: 65.89  E-value: 3.95e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  361 FFWGLCSLLSWNTIVAAMPYIQTL----------------PVPNIGNVVTMCSLIPLLFGTCLDAL--FDFNMILMHDIS 422
Cdd:TIGR00939   2 FMLGVGVLLPWNAFITAPQYFIEYykyaqnipeaipssskMWKHFNTYYTLASQLPSLLFNSLNLFliFRIPVTVRLLGG 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  423 AAINLSIFILVLMTQKAICSPYVIVGFVAAAGLVNG---ALMGTTSRIVLKNFGSR-LQPFFAGQAISAIFTTSLSVLFY 498
Cdd:TIGR00939  82 LVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINsgmALLQGSLFGLAGVFPSTySSAVMSGQGLAGVLTSLAMILVK 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  499 AFNLDS----------YVVACIMLVLGCVLELISAWITYAKF----------------------SEVIKLPR-------- 538
Cdd:TIGR00939 162 ASGNDShglkksalgyFGTPCVVQLICIVCYLLLPKLPFARYylqkkldkgagedetkgelrskAEQNGIPHggdqpspt 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  539 LQKFSTFVNQTKEQMTGLKKGLVEA-FSMNKTTMVSVILMFVFVTMYFPAVIADFTYEMN---DAWSKCSLFLAFAMGDY 614
Cdd:TIGR00939 242 LVLDWEKEPESPDEPQKPLKTSVWVvFTKVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLglsNWFYPIICFLLFNLFDW 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  615 ---TIKSCVMILKKKPRSALIILFLtNSILILILFLCNVKPSylHFFQPLIKHYVPMYMVCYLFGAVH----SFNMLLIT 687
Cdd:TIGR00939 322 lgrSLTSKFMWPDEDSRWLPILSFL-RVLFIPLFLLCNYPQR--SRLPVFFPGDAYFIILMLLFGFSNgylgSLSMCLAP 398

                         410       420       430
                  ....*....|....*....|....*....|....
gi 422933831  688 ANIKTHTSH-AGSLLQMCIYIGLGLGSIISLGFR 720
Cdd:TIGR00939 399 RQVDPHEREvAGALMVIFLLVGLALGAVLSFLFV 432
Chi1 super family cl43877
Chitinase [Carbohydrate transport and metabolism];
60-241 1.95e-05

Chitinase [Carbohydrate transport and metabolism];


The actual alignment was detected with superfamily member COG3469:

Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 47.83  E-value: 1.95e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  60 NVSSVSVLTTTIGTSSVVASSTTDQGHGTSSGVSAATSGhNNGSTSTTVATTTSATATTTTTTSTTPAATTESSTTGASS 139
Cdd:COG3469   31 SVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASST-AATSSTTSTTATATAAAAAATSTSATLVATSTASGANTGT 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831 140 ASTSDASTTGTTAASTSSATTTVAPVASTSSASTTVAPVASTSSASTTVAPVASTSSASTTVATGASTTVASSTTGTSAN 219
Cdd:COG3469  110 STVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTTTTTTSASTTPSATTTATATT 189

                        170       180
                 ....*....|....*....|..
gi 422933831 220 TTSASTLEPSSTTTKRTPSASS 241
Cdd:COG3469  190 ASGATTPSATTTATTTGPPTPG 211
 
Name Accession Description Interval E-value
2a57 TIGR00939
Equilibrative Nucleoside Transporter (ENT); [Transport and binding proteins, Nucleosides, ...
 361-720 3.95e-11

Equilibrative Nucleoside Transporter (ENT); [Transport and binding proteins, Nucleosides, purines and pyrimidines]


Pssm-ID: 273352  Cd Length: 437  Bit Score: 65.89  E-value: 3.95e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  361 FFWGLCSLLSWNTIVAAMPYIQTL----------------PVPNIGNVVTMCSLIPLLFGTCLDAL--FDFNMILMHDIS 422
Cdd:TIGR00939   2 FMLGVGVLLPWNAFITAPQYFIEYykyaqnipeaipssskMWKHFNTYYTLASQLPSLLFNSLNLFliFRIPVTVRLLGG 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  423 AAINLSIFILVLMTQKAICSPYVIVGFVAAAGLVNG---ALMGTTSRIVLKNFGSR-LQPFFAGQAISAIFTTSLSVLFY 498
Cdd:TIGR00939  82 LVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINsgmALLQGSLFGLAGVFPSTySSAVMSGQGLAGVLTSLAMILVK 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  499 AFNLDS----------YVVACIMLVLGCVLELISAWITYAKF----------------------SEVIKLPR-------- 538
Cdd:TIGR00939 162 ASGNDShglkksalgyFGTPCVVQLICIVCYLLLPKLPFARYylqkkldkgagedetkgelrskAEQNGIPHggdqpspt 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  539 LQKFSTFVNQTKEQMTGLKKGLVEA-FSMNKTTMVSVILMFVFVTMYFPAVIADFTYEMN---DAWSKCSLFLAFAMGDY 614
Cdd:TIGR00939 242 LVLDWEKEPESPDEPQKPLKTSVWVvFTKVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLglsNWFYPIICFLLFNLFDW 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  615 ---TIKSCVMILKKKPRSALIILFLtNSILILILFLCNVKPSylHFFQPLIKHYVPMYMVCYLFGAVH----SFNMLLIT 687
Cdd:TIGR00939 322 lgrSLTSKFMWPDEDSRWLPILSFL-RVLFIPLFLLCNYPQR--SRLPVFFPGDAYFIILMLLFGFSNgylgSLSMCLAP 398

                         410       420       430
                  ....*....|....*....|....*....|....
gi 422933831  688 ANIKTHTSH-AGSLLQMCIYIGLGLGSIISLGFR 720
Cdd:TIGR00939 399 RQVDPHEREvAGALMVIFLLVGLALGAVLSFLFV 432
Nucleoside_tran pfam01733
Nucleoside transporter; This is a family of nucleoside transporters. In mammalian cells ...
 451-720 5.05e-08

Nucleoside transporter; This is a family of nucleoside transporters. In mammalian cells nucleoside transporters transport nucleoside across the plasma membrane and are essential for nucleotide synthesis via the salvage pathways for cells that lack their own de novo synthesis pathways. Also in this family is mouse and human nucleolar protein HNP36, a protein of unknown function; although it has been hypothesized to be a plasma membrane nucleoside transporter.


Pssm-ID: 396340  Cd Length: 286  Bit Score: 55.12  E-value: 5.05e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  451 AAAGLVNGALMGttsriVLKNFGSR-LQPFFAGQAISAIFTTSLSVLFYAFNLDS-------YVVACIMLVLGCVLELIS 522
Cdd:pfam01733   9 SFNALLQNSLFG-----LAGVFPSTyTQAVMSGQGLAGVLVSVVMILTKASNSDLsesallyFGTSIVVVIVCAICLNVL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  523 AWITYAKFSEVIKLprlqKFSTFVNQtKEQMTGLKKGLVEAFSMNKTTMVSVILMFVFVTMYFPAVIADFTYEMNDAWS- 601
Cdd:pfam01733  84 KKLRFYKYHWQLKL----EGPTFDNS-DEQEENLKVLFFVILAKIKVLALSVVLIFTVTLSVFPAVTAEVVSSLPTWEAy 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  602 --KCSLFLAFAMGDY---TIKSCVMILKKKPRsALIILFLTNSILILILFLCNVKPSYlHFFQPLIKHYVPMYMVCYLFG 676
Cdd:pfam01733 159 fiPVLCFLLFNLFDWlgrSLAAWFMWPGQDPR-WLPVLVILRFLFIPLFLLCNYKPQS-RALPVLFESDAWFIIFMCLFA 236

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 422933831  677 AVH----SFNMLLITANIKTHTSH-AGSLLQMCIYIGLGLGSIISLGFR 720
Cdd:pfam01733 237 FSNgylsSLCMCYAPKSVPPHESEtAGAIMVFFLCLGLALGAVISFVFR 285
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
60-241 1.95e-05

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 47.83  E-value: 1.95e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  60 NVSSVSVLTTTIGTSSVVASSTTDQGHGTSSGVSAATSGhNNGSTSTTVATTTSATATTTTTTSTTPAATTESSTTGASS 139
Cdd:COG3469   31 SVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASST-AATSSTTSTTATATAAAAAATSTSATLVATSTASGANTGT 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831 140 ASTSDASTTGTTAASTSSATTTVAPVASTSSASTTVAPVASTSSASTTVAPVASTSSASTTVATGASTTVASSTTGTSAN 219
Cdd:COG3469  110 STVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTTTTTTSASTTPSATTTATATT 189

                        170       180
                 ....*....|....*....|..
gi 422933831 220 TTSASTLEPSSTTTKRTPSASS 241
Cdd:COG3469  190 ASGATTPSATTTATTTGPPTPG 211
PRK10905 PRK10905
cell division protein DamX; Validated
 162-240 2.65e-05

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 46.85  E-value: 2.65e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831 162 VAPVASTSSASTTVAPVASTSS--ASTTVAPVASTSSASTTVATGASTTVASSTTGTSANTTSASTLEPSSTTTKRTPSA 239
Cdd:PRK10905 176 PKPVAQTPKRTEPAAPVASTKApaATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSLKSAPSSHYTLQLSSS 255


                 .
gi 422933831 240 S 240
Cdd:PRK10905 256 S 256
Metaviral_G pfam09595
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. ...
 164-241 5.17e-05

Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. It is high in serine and threonine suggesting it is highly glycosylated.


Pssm-ID: 462833 [Multi-domain]  Cd Length: 183  Bit Score: 44.56  E-value: 5.17e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 422933831  164 PVASTSSASTTVAPVASTSSASTTVAPVASTssastTVATGASTTVASSTTGTSANTTSA-STLEPSSTTTKRTPSASS 241
Cdd:pfam09595 103 PLEPAAKTKPSEHEPANPPDASNRLSPPDAS-----TAAIREARTFRKPSTGKRNNPSSAqSDQSPPRANHEAIGRANP 176
SP4_N cd22536
N-terminal domain of transcription factor Specificity Protein (SP) 4; Specificity Proteins ...
 166-241 1.52e-03

N-terminal domain of transcription factor Specificity Protein (SP) 4; Specificity Proteins (SPs) are transcription factors that are involved in many cellular processes, including cell differentiation, cell growth, apoptosis, immune responses, response to DNA damage, and chromatin remodeling. Human SP4 is a risk gene of multiple psychiatric disorders including schizophrenia, bipolar disorder, and major depression. SP4 belongs to a family of proteins, called the SP/Kruppel or Krueppel-like Factor (KLF) family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. SP factors preferentially bind GC boxes, while KLFs bind CACCC boxes. Another characteristic hallmark of SP factors is the presence of the Buttonhead (BTD) box CXCPXC, just N-terminal to the zinc fingers. The function of the BTD box is unknown, but it is thought to play an important physiological role. Another feature of most SP factors is the presence of a conserved amino acid stretch, the so-called SP box, located close to the N-terminus. SP factors may be separated into three groups based on their domain architecture and the similarity of their N-terminal transactivation domains: SP1-4, SP5, and SP6-9. The transactivation domains between the three groups are not homologous to one another. SP1-4 have similar N-terminal transactivation domains characterized by glutamine-rich regions, which, in most cases, have adjacent serine/threonine-rich regions. This model represents the N-terminal domain of SP4.


Pssm-ID: 411773 [Multi-domain]  Cd Length: 623  Bit Score: 41.83  E-value: 1.52e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831 166 ASTSSASTTVAPVASTSSASTTVAPVASTSSASTTVATG---ASTTVASSTTG--TSANTTSASTLEPSSTTTKRTPSAS 240
Cdd:cd22536  268 GGVSNGNQLVSTPITTASVSTMPESPSSSTTCTTTASTSltsSDTLVSSAETGqyASTAASSERTEEEPQTSAAESEAQS 347


                 .
gi 422933831 241 S 241
Cdd:cd22536  348 S 348
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
 69-240 7.42e-03

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 39.60  E-value: 7.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831   69 TTIGTSSVVASSTTD-------QGHGTSSGVSAATS-----GHNNGSTSTTVATTTSATATTTTTTSTTPAATTESSTTG 136
Cdd:NF033849  313 TTEGTSTTDSSSHSQsssynvsSGTGVSSSHSDGTSqstsiSHSESSSESTGTSVGHSTSSSVSSSESSSRSSSSGVSGG 392

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  137 ASSASTSDASTTGTTAAS--------TSSATTTVAPVASTSSASTTVAPVASTSSASTTVApVASTSSASTTVATGASTT 208
Cdd:NF033849  393 FSGGIAGGGVTSEGLGASqggsegwgSGDSVQSVSQSYGSSSSTGTSSGHSDSSSHSTSSG-QADSVSQGTSWSEGTGTS 471

                         170       180       190
                  ....*....|....*....|....*....|..
gi 422933831  209 VASSTTGTSANTTSASTLEPSSTTTKRTPSAS 240
Cdd:NF033849  472 QGQSVGTSESWSTSQSETDSVGDSTGTSESVS 503
 
Name Accession Description Interval E-value
2a57 TIGR00939
Equilibrative Nucleoside Transporter (ENT); [Transport and binding proteins, Nucleosides, ...
 361-720 3.95e-11

Equilibrative Nucleoside Transporter (ENT); [Transport and binding proteins, Nucleosides, purines and pyrimidines]


Pssm-ID: 273352  Cd Length: 437  Bit Score: 65.89  E-value: 3.95e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  361 FFWGLCSLLSWNTIVAAMPYIQTL----------------PVPNIGNVVTMCSLIPLLFGTCLDAL--FDFNMILMHDIS 422
Cdd:TIGR00939   2 FMLGVGVLLPWNAFITAPQYFIEYykyaqnipeaipssskMWKHFNTYYTLASQLPSLLFNSLNLFliFRIPVTVRLLGG 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  423 AAINLSIFILVLMTQKAICSPYVIVGFVAAAGLVNG---ALMGTTSRIVLKNFGSR-LQPFFAGQAISAIFTTSLSVLFY 498
Cdd:TIGR00939  82 LVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINsgmALLQGSLFGLAGVFPSTySSAVMSGQGLAGVLTSLAMILVK 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  499 AFNLDS----------YVVACIMLVLGCVLELISAWITYAKF----------------------SEVIKLPR-------- 538
Cdd:TIGR00939 162 ASGNDShglkksalgyFGTPCVVQLICIVCYLLLPKLPFARYylqkkldkgagedetkgelrskAEQNGIPHggdqpspt 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  539 LQKFSTFVNQTKEQMTGLKKGLVEA-FSMNKTTMVSVILMFVFVTMYFPAVIADFTYEMN---DAWSKCSLFLAFAMGDY 614
Cdd:TIGR00939 242 LVLDWEKEPESPDEPQKPLKTSVWVvFTKVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLglsNWFYPIICFLLFNLFDW 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  615 ---TIKSCVMILKKKPRSALIILFLtNSILILILFLCNVKPSylHFFQPLIKHYVPMYMVCYLFGAVH----SFNMLLIT 687
Cdd:TIGR00939 322 lgrSLTSKFMWPDEDSRWLPILSFL-RVLFIPLFLLCNYPQR--SRLPVFFPGDAYFIILMLLFGFSNgylgSLSMCLAP 398

                         410       420       430
                  ....*....|....*....|....*....|....
gi 422933831  688 ANIKTHTSH-AGSLLQMCIYIGLGLGSIISLGFR 720
Cdd:TIGR00939 399 RQVDPHEREvAGALMVIFLLVGLALGAVLSFLFV 432
Nucleoside_tran pfam01733
Nucleoside transporter; This is a family of nucleoside transporters. In mammalian cells ...
 451-720 5.05e-08

Nucleoside transporter; This is a family of nucleoside transporters. In mammalian cells nucleoside transporters transport nucleoside across the plasma membrane and are essential for nucleotide synthesis via the salvage pathways for cells that lack their own de novo synthesis pathways. Also in this family is mouse and human nucleolar protein HNP36, a protein of unknown function; although it has been hypothesized to be a plasma membrane nucleoside transporter.


Pssm-ID: 396340  Cd Length: 286  Bit Score: 55.12  E-value: 5.05e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  451 AAAGLVNGALMGttsriVLKNFGSR-LQPFFAGQAISAIFTTSLSVLFYAFNLDS-------YVVACIMLVLGCVLELIS 522
Cdd:pfam01733   9 SFNALLQNSLFG-----LAGVFPSTyTQAVMSGQGLAGVLVSVVMILTKASNSDLsesallyFGTSIVVVIVCAICLNVL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  523 AWITYAKFSEVIKLprlqKFSTFVNQtKEQMTGLKKGLVEAFSMNKTTMVSVILMFVFVTMYFPAVIADFTYEMNDAWS- 601
Cdd:pfam01733  84 KKLRFYKYHWQLKL----EGPTFDNS-DEQEENLKVLFFVILAKIKVLALSVVLIFTVTLSVFPAVTAEVVSSLPTWEAy 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  602 --KCSLFLAFAMGDY---TIKSCVMILKKKPRsALIILFLTNSILILILFLCNVKPSYlHFFQPLIKHYVPMYMVCYLFG 676
Cdd:pfam01733 159 fiPVLCFLLFNLFDWlgrSLAAWFMWPGQDPR-WLPVLVILRFLFIPLFLLCNYKPQS-RALPVLFESDAWFIIFMCLFA 236

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 422933831  677 AVH----SFNMLLITANIKTHTSH-AGSLLQMCIYIGLGLGSIISLGFR 720
Cdd:pfam01733 237 FSNgylsSLCMCYAPKSVPPHESEtAGAIMVFFLCLGLALGAVISFVFR 285
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
60-241 1.95e-05

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 47.83  E-value: 1.95e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  60 NVSSVSVLTTTIGTSSVVASSTTDQGHGTSSGVSAATSGhNNGSTSTTVATTTSATATTTTTTSTTPAATTESSTTGASS 139
Cdd:COG3469   31 SVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASST-AATSSTTSTTATATAAAAAATSTSATLVATSTASGANTGT 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831 140 ASTSDASTTGTTAASTSSATTTVAPVASTSSASTTVAPVASTSSASTTVAPVASTSSASTTVATGASTTVASSTTGTSAN 219
Cdd:COG3469  110 STVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTTTTTTSASTTPSATTTATATT 189

                        170       180
                 ....*....|....*....|..
gi 422933831 220 TTSASTLEPSSTTTKRTPSASS 241
Cdd:COG3469  190 ASGATTPSATTTATTTGPPTPG 211
PRK10905 PRK10905
cell division protein DamX; Validated
 162-240 2.65e-05

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 46.85  E-value: 2.65e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831 162 VAPVASTSSASTTVAPVASTSS--ASTTVAPVASTSSASTTVATGASTTVASSTTGTSANTTSASTLEPSSTTTKRTPSA 239
Cdd:PRK10905 176 PKPVAQTPKRTEPAAPVASTKApaATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSLKSAPSSHYTLQLSSS 255


                 .
gi 422933831 240 S 240
Cdd:PRK10905 256 S 256
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
60-247 3.03e-05

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 47.05  E-value: 3.03e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  60 NVSSVSVLTTTIGTSSVVASSTTDQGHGTSSGVSAATSGHNNGSTSTTVATTTSATATTTTTTSTTPAATTESSTTGASS 139
Cdd:COG3469   17 ATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSATL 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831 140 ASTSDASTTGTTAASTSsatttVAPVASTSSASTTVAPVASTSSASTTVAPVASTSSASTTVATGASTTVASSTTGTSAN 219
Cdd:COG3469   97 VATSTASGANTGTSTVT-----TTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTTTT 171

                        170       180
                 ....*....|....*....|....*...
gi 422933831 220 TTSASTLEPSSTTTKRTPSASSTTSKTP 247
Cdd:COG3469  172 TTSASTTPSATTTATATTASGATTPSAT 199
PHA03255 PHA03255
BDLF3; Provisional
 169-238 3.10e-05

BDLF3; Provisional


Pssm-ID: 165513 [Multi-domain]  Cd Length: 234  Bit Score: 46.05  E-value: 3.10e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 422933831 169 SSASTTVAPVASTSSAST--TVAPVASTSSASTTVATGASTTVASSTTGTSANTTSASTLEPSSTTTKRTPS 238
Cdd:PHA03255  82 TSTGTTVTPVPTTSNASTinVTTKVTAQNITATEAGTGTSTGVTSNVTTRSSSTTSATTRITNATTLAPTLS 153
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
19-235 3.44e-05

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 47.05  E-value: 3.44e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  19 TNSTLAASTSQVTTASQATLSTTATLPPTTASTAATDTTTTNVSSVSVLTTTIGTSSVVASSTTDQGHGTSSGVSAATSG 98
Cdd:COG3469    1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  99 HNNGSTSTTVATTTSATATTTTTTSTTPAATTESSTTGASSASTSDASTTGTTAASTSSATTTVAPVASTSSASTTVAPV 178
Cdd:COG3469   81 TATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETAT 160

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 422933831 179 ASTSSASTTVAPvaSTSSASTTVATGASTTVASSTTGTSANTTSASTLEPSSTTTKR 235
Cdd:COG3469  161 GGTTTTSTTTTT--TSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLPKH 215
Metaviral_G pfam09595
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. ...
 164-241 5.17e-05

Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. It is high in serine and threonine suggesting it is highly glycosylated.


Pssm-ID: 462833 [Multi-domain]  Cd Length: 183  Bit Score: 44.56  E-value: 5.17e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 422933831  164 PVASTSSASTTVAPVASTSSASTTVAPVASTssastTVATGASTTVASSTTGTSANTTSA-STLEPSSTTTKRTPSASS 241
Cdd:pfam09595 103 PLEPAAKTKPSEHEPANPPDASNRLSPPDAS-----TAAIREARTFRKPSTGKRNNPSSAqSDQSPPRANHEAIGRANP 176
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
13-226 7.47e-05

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 45.90  E-value: 7.47e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  13 TQATLATNSTLAASTSQVTTASQATlsttatlppTTASTAATDTTTTNVSSVSVLTTTIGTSSVVASSTTDQGHGTSSGV 92
Cdd:COG3469   14 GASATAVTLLGAAATAASVTLTAAT---------ATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  93 SAATSGHNNGSTSTTVATTTSATATTTTTTSTTPAATTeSSTTGASSASTSDASTTGTTAASTSSATTTVAPVASTSSAS 172
Cdd:COG3469   85 AAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSV-TSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGT 163

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 422933831 173 TTVAPVASTSSASTTVAPVASTSSASTTVATGASTTVASSTTGTSANTTSASTL 226
Cdd:COG3469  164 TTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLPKHVL 217
PRK12495 PRK12495
hypothetical protein; Provisional
 163-269 7.91e-05

hypothetical protein; Provisional


Pssm-ID: 183558 [Multi-domain]  Cd Length: 226  Bit Score: 44.47  E-value: 7.91e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831 163 APVASTSSASTTVAPVA-STSSASTTVAPVASTSSASTTVATGASTTVASSTTGTSANTTSASTLEPSSTTTKRTPSASS 241
Cdd:PRK12495  82 AEATAPSDAGSQASPDDdAQPAAEAEAADQSAPPEASSTSATDEAATDPPATAAARDGPTPDPTAQPATPDERRSPRQRP 161

                         90       100
                 ....*....|....*....|....*...
gi 422933831 242 TTSKTPVTVTTtvqtdQGQQGDGDVQPA 269
Cdd:PRK12495 162 PVSGEPPTPST-----PDAHVAGTLQAA 184
PRK11907 PRK11907
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
162-234 4.72e-04

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;


Pssm-ID: 237019 [Multi-domain]  Cd Length: 814  Bit Score: 43.69  E-value: 4.72e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 422933831 162 VAPVASTSSASTTVAPVAS--TSSASTTVAPVASTSS--ASTTVATGASTTVASSTTgTSANTTSASTLEPSSTTTK 234
Cdd:PRK11907  32 VTTTPATSTEAEQTTPVESdaTEEADNTETPVAATTAaeAPSSSETAETSDPTSEAT-DTTTSEARTVTPAATETSK 107
PRK10856 PRK10856
cytoskeleton protein RodZ;
163-224 9.90e-04

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 41.94  E-value: 9.90e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 422933831 163 APVASTSSASTTVAPVASTSSASTTVAPV---ASTSSASTTVATGASTTVASSTTGTSANTTSAS 224
Cdd:PRK10856 185 TPTNSQTPAVATAPAPAVDPQQNAVVAPSqanVDTAATPAPAAPATPDGAAPLPTDQAGVSTPAA 249
SP4_N cd22536
N-terminal domain of transcription factor Specificity Protein (SP) 4; Specificity Proteins ...
 166-241 1.52e-03

N-terminal domain of transcription factor Specificity Protein (SP) 4; Specificity Proteins (SPs) are transcription factors that are involved in many cellular processes, including cell differentiation, cell growth, apoptosis, immune responses, response to DNA damage, and chromatin remodeling. Human SP4 is a risk gene of multiple psychiatric disorders including schizophrenia, bipolar disorder, and major depression. SP4 belongs to a family of proteins, called the SP/Kruppel or Krueppel-like Factor (KLF) family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. SP factors preferentially bind GC boxes, while KLFs bind CACCC boxes. Another characteristic hallmark of SP factors is the presence of the Buttonhead (BTD) box CXCPXC, just N-terminal to the zinc fingers. The function of the BTD box is unknown, but it is thought to play an important physiological role. Another feature of most SP factors is the presence of a conserved amino acid stretch, the so-called SP box, located close to the N-terminus. SP factors may be separated into three groups based on their domain architecture and the similarity of their N-terminal transactivation domains: SP1-4, SP5, and SP6-9. The transactivation domains between the three groups are not homologous to one another. SP1-4 have similar N-terminal transactivation domains characterized by glutamine-rich regions, which, in most cases, have adjacent serine/threonine-rich regions. This model represents the N-terminal domain of SP4.


Pssm-ID: 411773 [Multi-domain]  Cd Length: 623  Bit Score: 41.83  E-value: 1.52e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831 166 ASTSSASTTVAPVASTSSASTTVAPVASTSSASTTVATG---ASTTVASSTTG--TSANTTSASTLEPSSTTTKRTPSAS 240
Cdd:cd22536  268 GGVSNGNQLVSTPITTASVSTMPESPSSSTTCTTTASTSltsSDTLVSSAETGqyASTAASSERTEEEPQTSAAESEAQS 347


                 .
gi 422933831 241 S 241
Cdd:cd22536  348 S 348
PRK10856 PRK10856
cytoskeleton protein RodZ;
167-240 2.76e-03

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 40.39  E-value: 2.76e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 422933831 167 STSSASTTVAPVASTSSASTTVAPVASTSSASTTVATGASTTVASSTTGTSANTTSASTLEPSSTTTKRTPSAS 240
Cdd:PRK10856 168 TTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQ 241
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
61-241 3.56e-03

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 40.51  E-value: 3.56e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  61 VSSVSVLTTTIGTSSVVASSTtdqghGTSSGVSAATSGHNNGSTSTTVATTTSATATTTTTTSTTPAATTESSTTGASSA 140
Cdd:COG3469    1 SSSVSTAASPTAGGASATAVT-----LLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSST 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831 141 STSDASTTGTTAASTSSATTTVAPVA------STSSASTTVAPVASTSSASTTVAPVASTSSASTTVATGASTTVASS-- 212
Cdd:COG3469   76 TSTTATATAAAAAATSTSATLVATSTasgantGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVsg 155

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 422933831 213 -------TTGTSANTTSASTLEPSSTTTKRTPSASS 241
Cdd:COG3469  156 tetatggTTTTSTTTTTTSASTTPSATTTATATTAS 191
SP4_N cd22536
N-terminal domain of transcription factor Specificity Protein (SP) 4; Specificity Proteins ...
 162-241 4.67e-03

N-terminal domain of transcription factor Specificity Protein (SP) 4; Specificity Proteins (SPs) are transcription factors that are involved in many cellular processes, including cell differentiation, cell growth, apoptosis, immune responses, response to DNA damage, and chromatin remodeling. Human SP4 is a risk gene of multiple psychiatric disorders including schizophrenia, bipolar disorder, and major depression. SP4 belongs to a family of proteins, called the SP/Kruppel or Krueppel-like Factor (KLF) family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. SP factors preferentially bind GC boxes, while KLFs bind CACCC boxes. Another characteristic hallmark of SP factors is the presence of the Buttonhead (BTD) box CXCPXC, just N-terminal to the zinc fingers. The function of the BTD box is unknown, but it is thought to play an important physiological role. Another feature of most SP factors is the presence of a conserved amino acid stretch, the so-called SP box, located close to the N-terminus. SP factors may be separated into three groups based on their domain architecture and the similarity of their N-terminal transactivation domains: SP1-4, SP5, and SP6-9. The transactivation domains between the three groups are not homologous to one another. SP1-4 have similar N-terminal transactivation domains characterized by glutamine-rich regions, which, in most cases, have adjacent serine/threonine-rich regions. This model represents the N-terminal domain of SP4.


Pssm-ID: 411773 [Multi-domain]  Cd Length: 623  Bit Score: 40.29  E-value: 4.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831 162 VAPVASTSSASTTVAPVASTSSASTTvapVASTSSASTTVATGASTTVASSTTGTSANTTSastlEPSSTTTKRTPSASS 241
Cdd:cd22536  277 VSTPITTASVSTMPESPSSSTTCTTT---ASTSLTSSDTLVSSAETGQYASTAASSERTEE----EPQTSAAESEAQSSS 349
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
 15-241 7.19e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 39.56  E-value: 7.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831   15 ATLATNSTLAASTSQVTTASQATLSTTATLPPTTASTAATDTTTTNVSSVSVLTTTIGTSSVVASSTTDQGHGTSSGVSA 94
Cdd:pfam17823  79 AHLNSTEVTAEHTPHGTDLSEPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAALPSEAFSAPRAAACRANASAAP 158

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831   95 ATSghnngsTSTTVATTTSATATTTTTTSTTPAATTESSTTGASSASTSDASTTGTTAASTSSATTTVAPVASTSSAST- 173
Cdd:pfam17823 159 RAA------IAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVg 232

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 422933831  174 TVAPVASTSSASTTVAPVASTSSASTTVATGASTTVASSTTGTSANTTSASTLEPSSTTTkRTPSASS 241
Cdd:pfam17823 233 NSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPSDTMA-RNPAAPM 299
PRK10856 PRK10856
cytoskeleton protein RodZ;
163-230 7.35e-03

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 39.24  E-value: 7.35e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 422933831 163 APVASTSSASTT-----VAPVASTSSASTTVAPVASTSSASTTVATGASTTVASSTTGTSANTTSASTLEPSS 230
Cdd:PRK10856 177 APAAPVDTTPTNsqtpaVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAGVSTPAA 249
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
 69-240 7.42e-03

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 39.60  E-value: 7.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831   69 TTIGTSSVVASSTTD-------QGHGTSSGVSAATS-----GHNNGSTSTTVATTTSATATTTTTTSTTPAATTESSTTG 136
Cdd:NF033849  313 TTEGTSTTDSSSHSQsssynvsSGTGVSSSHSDGTSqstsiSHSESSSESTGTSVGHSTSSSVSSSESSSRSSSSGVSGG 392

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831  137 ASSASTSDASTTGTTAAS--------TSSATTTVAPVASTSSASTTVAPVASTSSASTTVApVASTSSASTTVATGASTT 208
Cdd:NF033849  393 FSGGIAGGGVTSEGLGASqggsegwgSGDSVQSVSQSYGSSSSTGTSSGHSDSSSHSTSSG-QADSVSQGTSWSEGTGTS 471

                         170       180       190
                  ....*....|....*....|....*....|..
gi 422933831  209 VASSTTGTSANTTSASTLEPSSTTTKRTPSAS 240
Cdd:NF033849  472 QGQSVGTSESWSTSQSETDSVGDSTGTSESVS 503
motB PRK12799
flagellar motor protein MotB; Reviewed
 164-273 7.58e-03

flagellar motor protein MotB; Reviewed


Pssm-ID: 183756 [Multi-domain]  Cd Length: 421  Bit Score: 39.31  E-value: 7.58e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 422933831 164 PVASTSSASTTVAPVASTSSASTTVAPVASTSSASTtvaTGASTTVASSTTGTSANTTSASTLEPSSTTTKRTPSASSTT 243
Cdd:PRK12799 300 PVAAVTPSSAVTQSSAITPSSAAIPSPAVIPSSVTT---QSATTTQASAVALSSAGVLPSDVTLPGTVALPAAEPVNMQP 376

                         90       100       110
                 ....*....|....*....|....*....|
gi 422933831 244 SKTPVTVTTtvqtdqgQQGDGDVQPAKNDP 273
Cdd:PRK12799 377 QPMSTTETQ-------QSSTGNITSTANGP 399
PRK11907 PRK11907
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
165-240 8.38e-03

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;


Pssm-ID: 237019 [Multi-domain]  Cd Length: 814  Bit Score: 39.45  E-value: 8.38e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 422933831 165 VASTSSASTTVAPVASTSSASTTVAPVASTSsASTTVATGASTTVASSTTGTSANTTSASTLEPSSTTTKRTPSAS 240
Cdd:PRK11907  11 VALTLALLTASNPKLAQAEEIVTTTPATSTE-AEQTTPVESDATEEADNTETPVAATTAAEAPSSSETAETSDPTS 85
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
165-238 9.25e-03

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 38.85  E-value: 9.25e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 422933831 165 VASTSSASTTVAP---VASTSSASTTVAPVASTSSASTTvaTGASTTVASSTTGTSANTTSASTLE-PSSTTTKRTPS 238
Cdd:PRK13042  22 TTTTQAANATTPSstkVEAPQSTPPSTKVEAPQSKPNAT--TPPSTKVEAPQQTPNATTPSSTKVEtPQSPTTKQVPT 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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