|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
1.07e-159 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 458.46 E-value: 1.07e-159
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 1 MLKYLFMLIFMTPLCLIGNFWWLVHSLMFVVSFFFMIGVYSYSDLNMISWFFGVDYFSFGLILLSFWVCSLMITASSSIY 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 81 LSSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFK 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 161 VYDCSHTLYFPLLSDFGSFYFLFYLFIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISF 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 241 LGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 321 IYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELSLLNSIISWSSLSFLTLMFLSFFSAVYTLYMYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 452849313 401 YSQHGSYYGGVYTCSLGYIREYHLLLLHWLPLNILCLKGEYFFF 444
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFML 444
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
47-443 |
2.82e-110 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 331.42 E-value: 2.82e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 47 MISWFFGVDYFSFGLILLSFWVCSLMITASSSIYLSSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLL 126
Cdd:MTH00150 15 SLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 127 ILGWGYQPERLQAGIYLIFYTLVASLPLLLVL---FKVYDCSHTLYFPLLSDFGSFYFLFYLFIVLAFLIKMPMFLVHLW 203
Cdd:MTH00150 95 ILGWGYQPERLQAGMYMMLYTVGASLPLLLVIlwmSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLW 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 204 LPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMS 283
Cdd:MTH00150 175 LPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMS 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 284 MVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNL 363
Cdd:MTH00150 255 LVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 364 LGELSLLNSIISWSSLSFLTLMFLSFFSAVYTLYMYSYSQHGSYYGGVYTCSLGYIREYHLLLLHWLPLNILCLKGEYFF 443
Cdd:MTH00150 335 LSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLLF 414
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-406 |
8.13e-109 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 329.01 E-value: 8.13e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 1 MLKYLFMLIFMTPLCLIGNFWWLVHS---LMFVVSFFFMIGVYSYSDLNMISWFFGVDYFSFGLILLSFWVCSLMITASS 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTfstLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 78 SIYLSSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLV 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 158 LFKVYDCSHTLYFPLLS-DFGSFYF--LFYLFIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSmEPPSIYLmnLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 235 MKIISFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGM 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 315 FCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELSLLNSIISWSSLSFLTLMFLSFFSAVY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410
....*....|..
gi 452849313 395 TLYMYSYSQHGS 406
Cdd:MTH00014 401 SLFLYTSTQHGS 412
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
1.61e-106 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 322.70 E-value: 1.61e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 1 MLKYLFMLIFMTPLCLIGNFWWLVHSLMFVVSFFFMIGVYS-YSDLNMISWFFGVDYFSFGLILLSFWVCSLMITASSSI 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNsFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 80 YLSSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 160 KVYDCSHTLYFPLLSDFGSFYF---LFYLFIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMK 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFylfLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 237 IISFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 317 LSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELSLLNSIISWSSLSFLTLMFLSFFSAVYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 452849313 397 YMYSYSQHGSYYGGVYTCSLGYIREYHLLLLHWLPLNILCLKGEYFFF 444
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFIC 448
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-405 |
3.74e-101 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 309.43 E-value: 3.74e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 1 MLKYLF---MLIFMTPLCLIGNFWWLVHSLMFVVSFFFMIGVY-SYSDLNMISWFFGVDYFSFGLILLSFWVCSLMITAS 76
Cdd:MTH00124 1 MLKIILptiMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKpPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 77 SS--IYLSSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLVASLPL 154
Cdd:MTH00124 81 QNhlQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 155 LLVLFKVYDCSHTLYFPLLSDFGSF------YFLFYLFIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGG 228
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTltnswtNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 229 YGIFRVMKIISFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHG 308
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 309 LCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELSLLNSIISWSSLSFLTLMFLS 388
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410
....*....|....*..
gi 452849313 389 FFSAVYTLYMYSYSQHG 405
Cdd:MTH00124 401 LITASYTLYMFLSTQRG 417
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-405 |
1.90e-95 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 294.52 E-value: 1.90e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 1 MLKYLF---MLIFMTPLCLIGNFWWLVHSLMFVVSFFFMIGVYSYS-DLNMISWFFGVDYFSFGLILLSFWVCSLMITAS 76
Cdd:MTH00068 1 MLKIIIptlMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSeTMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 77 SSiYLSS---YHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLVASLP 153
Cdd:MTH00068 81 QN-HLKNepiNRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 154 LLLVLFKVYDCSHTLYFPLLSDFGSFYF------LFYLFIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLmtytnkIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 228 GYGIFRVMKIISFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGH 307
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 308 GLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELSLLNSIISWSSLSFLTLMFL 387
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410
....*....|....*...
gi 452849313 388 SFFSAVYTLYMYSYSQHG 405
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRG 417
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
6-406 |
6.57e-94 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 290.72 E-value: 6.57e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 6 FMLIFMTPLCLIGNFWWLVHSLMFVVSFF--FMIGVYSYSDLNMISWFFGVDYFSFGLILLSFWVCSLMITASSSI--YL 81
Cdd:MTH00044 9 LGIAITSWIVPKNKLWPISISQSSLISLLslFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHlsNN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 82 SSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKV 161
Cdd:MTH00044 89 SPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAI 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 162 YDCSHTLYFPL------LSDFGSFYFLFYLFIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVM 235
Cdd:MTH00044 169 YSSSSSLSIPLselnwlTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLI 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 236 KIISFLGLSF-NYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGM 314
Cdd:MTH00044 249 NLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSAL 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 315 FCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELSLLNSIISWSSLSFLTLMFLSFFSAVY 394
Cdd:MTH00044 329 FCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIY 408
|
410
....*....|..
gi 452849313 395 TLYMYSYSQHGS 406
Cdd:MTH00044 409 SLLIYQLTNSGS 420
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
5-422 |
4.85e-93 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 288.38 E-value: 4.85e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 5 LFMLIFMTPLCLIGNFWWLVHSLMFVVSFFFMIGVYSYSDLNMISW--FFGVDYFSFGLILLSFWVCSLMITASSSIYLS 82
Cdd:MTH00206 6 LIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSnlYLSYDPLSSPLVILSCWLLPLMFLASQNHMKN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 83 SYHS--SIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFK 160
Cdd:MTH00206 86 EPINrqRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 161 VYDCSHTLYFPLL---SDFGSFYFLFYLFIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKI 237
Cdd:MTH00206 166 LQNSLGSLSLYILyfsKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 238 ISFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCL 317
Cdd:MTH00206 246 LGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 318 SNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELSLLNSIISWSSLSFLTLMFLSFFSAVYTLY 397
Cdd:MTH00206 326 ANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLY 405
|
410 420
....*....|....*....|....*
gi 452849313 398 MYSYSQHGSYYGGVYTCSLGYIREY 422
Cdd:MTH00206 406 MFVMTQHGKTPNHLLSLSPSSTREH 430
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-407 |
2.03e-88 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 276.39 E-value: 2.03e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 1 MLKYLFMLIFMTPLCLIGNFWWL-----VHSLMFVVSFFFMIGVYSYSDLNMISWFFgVDYFSFGLILLSFWVCSLMITA 75
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIwinttTYSLLISLISLLLLNQPNDNSLNFSLLFF-SDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 76 SSSIYL--SSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLVASLP 153
Cdd:MTH00110 80 SQHHLSkePLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 154 LLLVLFKVYDCSHTLYFPLLS------DFGSFYFLFYLFIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQlwaqplPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 228 GYGIFRVMKIISFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGH 307
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 308 GLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELSLLNSIISWSSLSFLTLMFL 387
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420
....*....|....*....|
gi 452849313 388 SFFSAVYTLYMYSYSQHGSY 407
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKL 419
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-405 |
4.98e-80 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 254.88 E-value: 4.98e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 1 MLKYLFMLIFMTPLCLIGNFWWL-----VHSLMFVVSFFFMIGVYSYSDLNMISWFFGVDYFSFGLILLSFWVCSLMITA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLwtttlAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 76 SSSIYLSSYHSSIFVFIVLF--LMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLVASLP 153
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLtsLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 154 LLLVLFKVYDCSHTL------YFPLLSDFGSFYFLFYLFIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00127 161 LLVALLLLQNSTGTLsmltlqYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 228 GYGIFRVMKIISFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGH 307
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 308 GLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELSLLNSIISWSSLSFLTLMFL 387
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410
....*....|....*...
gi 452849313 388 SFFSAVYTLYMYSYSQHG 405
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRG 418
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
48-358 |
4.25e-50 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 176.81 E-value: 4.25e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 48 ISWFFGVDYFSFGLILLSFWVCSLMITASSSIylSSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLI 127
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWNE--IKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 128 LGWGYqPERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPLLS------DFGSFYFLFYLFIvLAFLIKMPMFLVH 201
Cdd:COG1008 152 GIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAElaaaplPLTAQLLLFLAFF-IAFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 202 LWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMkiisfLGL------SFNYFWLALGLSGGVVVSFICFRQVDLKSLIA 275
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFA-----LPLfpeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 276 YSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNM 355
Cdd:COG1008 305 YSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
...
gi 452849313 356 AAP 358
Cdd:COG1008 385 GLP 387
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-388 |
6.12e-50 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 171.34 E-value: 6.12e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 113 YIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPLLSDFGSFY------FLFYLF 186
Cdd:pfam00361 8 YLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssglLLLFLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 187 IVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLSFNYFWLALGLSGGVVVSFICFR 266
Cdd:pfam00361 88 ILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGSLAALV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 267 QVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLS-NIIYERLGSRSLLINKGMINLMPSMAL 345
Cdd:pfam00361 168 QTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKTMPILAL 247
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 452849313 346 WWFLLSSSNMAAPPSLNLLGELSLLNSIISWSSLSFLTLMFLS 388
Cdd:pfam00361 248 VFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
52-397 |
4.17e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 163.94 E-value: 4.17e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 52 FGVDYFSFGLILLSFWV--CSLMITASSSIYLSSYhssiFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILG 129
Cdd:MTH00226 98 FAVDGISIYFIILTGFIvpCSILISWHSVKYLTKS----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 130 WGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTL-YFPLLSDF----GSFYFLFYLFIVLAFLIKMPMFLVHLWL 204
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTdYLTLASCShvvsEQTQKWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 205 PKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGL-SFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMS 283
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAqNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 284 MVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNL 363
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350
....*....|....*....|....*....|....
gi 452849313 364 LGELSLLNSIISWSSLSFLTLMFLSFFSAVYTLY 397
Cdd:MTH00226 414 IGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
51-399 |
1.40e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 162.15 E-value: 1.40e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 51 FFGVDYFSFGLILLSFWVCSLMITAS-SSIylsSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILG 129
Cdd:MTH00204 78 VFAVDGVSLFFILLTTLLIPICILISwKSI---KFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGI 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 130 WGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTL-YFPLLSDFGSFYFLFYLFI--VLAFLIKMPMFLVHLWLPK 206
Cdd:MTH00204 155 WGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQILLNIKLPLSIQKWLLVgfFLSLAVKIPQIPFHIWLPQ 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 207 AHVEAPISGSMILAGVLLKLGGYGIFRVMKIIsFLGLSFNYFWLALGLSGGVVV--SFICFRQVDLKSLIAYSSVAHMSM 284
Cdd:MTH00204 235 AHVEAPVAGSVILAGILLKLGGYGFLRFSWPL-FPAASEYFAPLIVMLSVIAVIygSLTTCRQVDFKRLIAYSSVAHMGL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 285 VIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLL 364
Cdd:MTH00204 314 VPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFV 393
|
330 340 350
....*....|....*....|....*....|....*
gi 452849313 365 GELSLLNSIISWSSLSFLTLMFLSFFSAVYTLYMY 399
Cdd:MTH00204 394 GEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-344 |
8.96e-44 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 159.98 E-value: 8.96e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 48 ISWFFGVDYFSFGLILLSFWVCSLMITASSSI---YLSSYHssIFVFIVLFLMIMLYCSFSSLSLlsfYIFFEASLIPTL 124
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEEikkRVKFYM--AALLWLEGGVIGVFAALDLLLF---YVFFEAMLIPMY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 125 LLILGWGYqPERLQAGIYLIFYTLVASLPLLLVLFkvydcshTLYFPLLSDFGSF---------------YFLFYLFiVL 189
Cdd:PRK05846 149 FLIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAII-------YLVVVYYNATGTFdiadllnlplppgvqYWLFLAF-FI 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 190 AFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMkiisfLGL------SFNYFWLALGLSGGVVVSFI 263
Cdd:PRK05846 220 AFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFS-----LPLfpdashEFAPIIITLGVIAIIYGALV 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 264 CFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSM 343
Cdd:PRK05846 295 ALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVL 374
|
.
gi 452849313 344 A 344
Cdd:PRK05846 375 A 375
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-399 |
5.74e-43 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 157.41 E-value: 5.74e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 48 ISWFFGVDYFSFGLILLSFWVCSLMITASssiYLSSYHSS-IFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLL 126
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILAS---WESIQKRVkEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 127 ILGWGyQPERLQAGIYLIFYTLVASLPLLL-VLFKVYDCSHTLYFPLLSD----FGSFYFLFYLFiVLAFLIKMPMFLVH 201
Cdd:TIGR01972 146 IGVWG-GPNRIYAAMKFFLYTLAGSLLMLLaILGLYFLGGGTFDLLELLNlplpFGVQTWLFLAF-FIAFAVKVPLFPLH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 202 LWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVA 280
Cdd:TIGR01972 224 TWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSIS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 281 HMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPps 360
Cdd:TIGR01972 304 HMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP-- 381
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 452849313 361 lnLLGELSLLNSIISWSSLSFLTLMFLS----FFSAVYTLYMY 399
Cdd:TIGR01972 382 --GTSGFVGEFLILLGSFKVNPVVAFLAalgiVLAAAYMLTLY 422
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
51-358 |
3.88e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 155.21 E-value: 3.88e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 51 FFGVDYFSFGLILLSFWVCSLMITAS-SSIylsSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILG 129
Cdd:MTH00217 75 VFAVDGISIFFLILTALLTPICILISwNSI---KFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 130 WGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPLLS----DFGSFYFLFYLFIvLAFLIKMPMFLVHLWLP 205
Cdd:MTH00217 152 WGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCclkiEKELQYFIFLGFF-LSLAIKIPKIPFHIWLP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 206 KAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSM 284
Cdd:MTH00217 231 QAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGL 310
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 452849313 285 VIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAP 358
Cdd:MTH00217 311 VTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIP 384
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
19-418 |
2.45e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 143.12 E-value: 2.45e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 19 NFWWLVHSLMFVVSFFFMIgVYSYSDLNMISWFFGVDYFSFGLILLSFWVCSLMITASSSIYLSSYHSSIFVFIVLFLMI 98
Cdd:MTH00094 2 SLLFFFSPFLFFLFLMFFS-FLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNLLILSNLLILICLLFFV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 99 MLYcsfsslsLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPLLSDFGS 178
Cdd:MTH00094 81 SSN-------MLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSWEM 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 179 FYFLfylfiVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLglsFNYFWLALGLSGGV 258
Cdd:MTH00094 154 FFIL-----SLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMI 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 259 VVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMIN 338
Cdd:MTH00094 226 LSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFS 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 339 LMPSMALWWFLLSSSNMAAPPSLNLLGELSLLNSIISWSSLSFLTLMFLSFFSAVYTLYMYSYSQHGSYYGGVYTCSLGY 418
Cdd:MTH00094 306 SSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGL 385
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-341 |
4.12e-33 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 130.54 E-value: 4.12e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 48 ISWFFGVDYFSFGLILLSFWVCSLMITASSSIylsSYHSSIFvfivLFLMIMLYCSFSSLS----LLSFYIFFEASLIPT 123
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKV---TRKPRLF----YFLMLVLYSAQIGVFlaqdLLLFFLMWELELVPV 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 124 LLLILGWGYQpERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPL----LSDF-GSFYFLFYLFIVLAFLIKMPMF 198
Cdd:PRK12561 124 YLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLaelgAKSYpLALELLLYAGFLIAFGVKLPIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 199 LVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYS 277
Cdd:PRK12561 203 PLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYS 282
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 452849313 278 SVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMP 341
Cdd:PRK12561 283 SVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP 346
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-359 |
1.52e-27 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 113.70 E-value: 1.52e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 52 FGVDYFSFGLILLSFWVCSLMITASSSIYLSSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWG 131
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 132 YqPERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPLLSDFGSFY-----FLFYLFIVLAFLIKMPMFLVHLWLPK 206
Cdd:COG0651 152 T-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELdpgllLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 207 AHVEAPISGSMILAGVLLKLGGYGIFRVMKII--SFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSM 284
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 452849313 285 VIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPP 359
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPP 385
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-358 |
1.14e-25 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 109.41 E-value: 1.14e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 48 ISWFFGVDYFSFGLILLSFWVCSLMITASSSIylsSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLI 127
Cdd:PRK02546 79 LTWSVGADGLSMPLILLTGFITTLAVLAAWPV---TFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 128 LGWGYQpERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPL----LSDFG-SFYFLFYLFIVLAFLIKMPMFLVHL 202
Cdd:PRK02546 156 AIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMtalaAKDFGlGFQLLCYAGLLIAYGVKLPIVPLHT 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 203 WLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAH 281
Cdd:PRK02546 235 WLPDAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISH 314
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 452849313 282 MSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAP 358
Cdd:PRK02546 315 MGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALP 391
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
50-393 |
2.17e-24 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 105.41 E-value: 2.17e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 50 WFFGVDYFSFGLILLSFWVCSLMITASSSIYLSSYhssifvfIVLFLMIMLYC----SFSSLSLLSFYIFFEASLIPTLL 125
Cdd:CHL00011 78 WRLGIDGLSIGPILLTGFITTLATLAAWPVTRNSR-------LFYFLMLAMYSgqigLFSSRDLLLFFIMWELELIPVYL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 126 LILGWGYQpERLQAGIYLIFYTLVASLPLLLVLFKV--YDCSH-TLYFPLLSDFG---SFYFLFYLFIVLAFLIKMPMFL 199
Cdd:CHL00011 151 LLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMglYGSNEpTLNFETLANQSypvALEILFYIGFLIAYAVKLPIIP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 200 VHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSS 278
Cdd:CHL00011 230 LHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 279 VAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAP 358
Cdd:CHL00011 310 VSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALP 389
|
330 340 350
....*....|....*....|....*....|....*
gi 452849313 359 PSLNLLGELSLLNSIISWSSLSFLTLMFLSFFSAV 393
Cdd:CHL00011 390 GMSGFVAELIVFFGIITSQKYLLMPKILITFVMAI 424
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-338 |
4.76e-23 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 101.32 E-value: 4.76e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 48 ISWFFGVDYFSFGLILLSFWVCSLMITASSSiylSSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLI 127
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSDE---SIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 128 LGWGYQpERLQAGIYLIFYTLVASLPLL---LVLFKVYDCSHTLYFPLLSDF--GSFYFLFYLFIVLAFLIKMPMFLVHL 202
Cdd:PRK06473 148 AIWGGQ-RRGYAATKFLLYTAISGILILvsfLGLVWLSGASSFDYEPLRSHTlpLSTQLLLLAPILVGFGIKIPLVPFHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 203 WLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLSFNYFWLALGLSGGVVVSFIC-FRQVDLKSLIAYSSVAH 281
Cdd:PRK06473 227 WLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCaIAQKDMKKMVAYSSIGH 306
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 452849313 282 MSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMIN 338
Cdd:PRK06473 307 MGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
16-343 |
1.72e-17 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 84.20 E-value: 1.72e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 16 LIGNFWWLVHSLMFVVSFFFMIGV--YSYSDLNMISWFFGVDYFSFGLILLSfwvcsLMITASSSIYLSSYHSSIFVFIV 93
Cdd:MTH00062 3 FFSVGFFLGFLLLLLFCLLYSSGVgcCILVVNNVFNGLFIFDSLSFYLILLV-----LFLGLYSQVMFYNLLSGVSRFFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 94 LFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPLL 173
Cdd:MTH00062 78 FLSLIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 174 SDFGSFYFLFYLFIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRvmkIISFLGLSFNYFWLALG 253
Cdd:MTH00062 158 GSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYR---FCGFIFSGSFLGYLFLC 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 254 LSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLIN 333
Cdd:MTH00062 235 CLFSVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLL 314
|
330
....*....|
gi 452849313 334 KGMINLMPSM 343
Cdd:MTH00062 315 KSGINGSLVL 324
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-359 |
2.61e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 83.78 E-value: 2.61e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 113 YIFFEASLIPTLLLIlGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPLLSD---FGSFYFLFYLFIVL 189
Cdd:PRK08375 132 FVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGalaENPTVVTAFGFVLL 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 190 AFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVM----KIISFLGLSFNYFWLALGLSGGVVVSFICF 265
Cdd:PRK08375 211 ALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfGGDFRFALGLGWLLAVLALLSMLVGSLAAL 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 266 RQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMAL 345
Cdd:PRK08375 291 GQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAA 370
|
250
....*....|....
gi 452849313 346 WWFLLSSSNMAAPP 359
Cdd:PRK08375 371 AFAVASLSLIGVPP 384
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-357 |
4.71e-17 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 83.22 E-value: 4.71e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 48 ISWFFGVDYFSFGLILLSfwvCSLMITASSSIYLSSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLI 127
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 128 LGWGYQpERLQAGIYLIFYTLVASLPLLLVLFKV----------YDCSHTLYFPLlsdfgSFYFLFYLFIVLAFLIKMPM 197
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIvwlsgstsfdYDAISTQNLSL-----NTQLILLTGLLLGFGIKIPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 198 FLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMkiisfLGL---SFNYFWLALGLSGGVVV---SFICFRQVDLK 271
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG-----LQLfpqTWSLVAPGLAIIGTISViygALSAIAQKDIK 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 272 SLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLS 351
Cdd:PRK07363 297 RMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLV 376
|
....*.
gi 452849313 352 SSNMAA 357
Cdd:PRK07363 377 LAGMAS 382
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
165-359 |
4.05e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 77.32 E-value: 4.05e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 165 SHTLYFPLLSDFGSFYFLFYLFIVL----AFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISF 240
Cdd:PRK12667 203 IRGLSFPLTGGLAGNPPLALGVALAlalwAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFG 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 241 LGLSFNYFWLA-------LGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSG 313
Cdd:PRK12667 283 ISPSLIDFRAAlspiliiLGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSL 362
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 452849313 314 MFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPP 359
Cdd:PRK12667 363 LFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPP 408
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
186-352 |
9.30e-15 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 76.12 E-value: 9.30e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 186 FIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIIS-FLGLSF-NYFWLALGLSGGVVVSFI 263
Cdd:PRK06458 219 FLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFpGRLLLIFGLLSVLVAAFF 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 264 CFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSM 343
Cdd:PRK06458 299 LLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLT 378
|
....*....
gi 452849313 344 AlWWFLLSS 352
Cdd:PRK06458 379 G-WGLMLGA 386
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
16-341 |
5.70e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 73.88 E-value: 5.70e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 16 LIGNFWWLVHSLMFVVSFFFMIGVYSYSDLNMISWFFGVDYFSFGLILLSFWVCSLMITASSSIYLSsyHSSIFVFIVLF 95
Cdd:PRK08668 29 VIGNALPLLFLIKLYFTLKVGTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTK--NDAYFNMFALM 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 96 LMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILgWGYQPERLQAGIYLIFyTLVASLPLLLVLFKVYDCSHTLYFPLLSD 175
Cdd:PRK08668 107 SLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADISQ 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 176 F------GSFYFLFYLFIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGL------ 243
Cdd:PRK08668 185 GlindtsTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLfsefgt 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 244 -----SFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLS 318
Cdd:PRK08668 265 yrgvpLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIF 344
|
330 340
....*....|....*....|...
gi 452849313 319 NIIYERLGSRSLLINKGMINLMP 341
Cdd:PRK08668 345 AAVIYRTGTTKISEMGGLIEKMP 367
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-324 |
1.42e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 69.21 E-value: 1.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 113 YIFFEASLIPTLLLIlGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPLLSDFGSFYFLFylfIVLAFL 192
Cdd:PRK07234 120 YVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFAL---IALGLL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 193 IKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLSFNYFWLALGLSGgvvvSFICFRQVDLKS 272
Cdd:PRK07234 196 VKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKR 271
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 452849313 273 LIAYSSVAHMSMVIGGlmtmnwwGCMGSLcLMIGHGLCSSGMFCLSNIIYER 324
Cdd:PRK07234 272 MLAFSTISQLGFILAA-------PLVGGL-YALAHGLVKSTLFLCAGALPSR 315
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-102 |
4.37e-12 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 62.54 E-value: 4.37e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 1 MLKYLFMLIFMTPLCLIGNFWWL-----VHSLMFVVSFFFMIGVYSYSDLNMISWFFGVDYFSFGLILLSFWVCSLMITA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLwttstLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100
....*....|....*....|....*....
gi 452849313 76 SSSIYLSS--YHSSIFVFIVLFLMIMLYC 102
Cdd:pfam01059 81 SQKHLKSEpnNRQRTFIFLLILLQLFLIL 109
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
114-359 |
2.37e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 65.91 E-value: 2.37e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 114 IFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPLLSDFGSFYFLFYLFIVLAFLI 193
Cdd:PRK08667 138 FFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 194 KMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSL 273
Cdd:PRK08667 218 KAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGL 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 274 IAYSSVAHMSMVIGGLMTMNWWGCMG--SLCLM---------IGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPS 342
Cdd:PRK08667 298 LAYSSIENIGIILMGIGLYVIFGVYGldTLALLalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPY 377
|
250
....*....|....*..
gi 452849313 343 MALWWFLLSSSNMAAPP 359
Cdd:PRK08667 378 TSALFLVGAVSIAALPP 394
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
178-327 |
4.11e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 64.78 E-value: 4.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 178 SFYFLFYLFIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKII--SFLGLSFNYFWLALGLS 255
Cdd:PRK08676 203 SVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIF 282
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 452849313 256 GGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGS 327
Cdd:PRK08676 283 SIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRS 354
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
80-359 |
2.31e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 59.77 E-value: 2.31e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 80 YLSSYHSSI---FVFIVLFLMIMLyCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLL 156
Cdd:PRK12646 101 YLSSRKDNLprfYFYLTLFMFSMI-GIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLV 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 157 VLFKVYDCSHTLYFPLL-------SDFGSFYFLFYLFIVLAFlIKMPMFLVHLWLPKAhVEAPISGSMIL-AGVLLKLGg 228
Cdd:PRK12646 180 GFIMLYIMTGTNNITEIlgqadhiKNHGLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAG- 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 229 ygIFRVMKIISFLGLSFNYFWLA--LGLSGGVVVSFICFRQVDLKSLIAYSSVAH----MSMV-IGGLMTMNWWGCMGSL 301
Cdd:PRK12646 257 --IFLLFRFTPLLGLSNMYIYIVtfVGLITMLFGSITALKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDAIASI 334
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 452849313 302 CLMI---------GHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALwWFLLSSSNMAAPP 359
Cdd:PRK12646 335 YVFVlfaalfhlmNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVP 400
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-395 |
2.85e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.98 E-value: 2.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 185 LFIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKII-----SFLGLSFNYFWLALGLSGGVV 259
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 260 VSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINL 339
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKS 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 452849313 340 MPSMALWWFLLSSSNMAAPPSLNLLGELSLLNSII-SWSSLSFLTLMFLSFFSAVYT 395
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIkSNAWIGLVVLLVGSGLSVIYV 429
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-349 |
7.34e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 57.67 E-value: 7.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 113 YIFFEASLIPTLLLiLGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPLLS------DFGSFYFLFYLF 186
Cdd:PRK12665 137 YVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAvrldelPSGTRTALFAVL 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 187 IVlAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIIsFLGLSFNYFWLALGLSGGVVVSFICFR 266
Cdd:PRK12665 216 LV-AFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLL-FPGGGLDTLLMVVALLTMVVGILGAIA 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 267 QVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALW 346
Cdd:PRK12665 294 QSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVL 373
|
...
gi 452849313 347 WFL 349
Cdd:PRK12665 374 FFV 376
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-359 |
1.13e-07 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 54.00 E-value: 1.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 187 IVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLSFNYFWL--ALGLSGGVVVSFIC 264
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLviIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 265 FRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMA 344
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
170
....*....|....*
gi 452849313 345 LWWFLLSSSNMAAPP 359
Cdd:PRK08377 372 LALTIGALSTVGIPL 386
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
182-289 |
3.08e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 52.58 E-value: 3.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 182 LFYLFIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVmkIISFLG---LSFNYFWLALGLSG-- 256
Cdd:PRK06521 211 LVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV--VFDLLGapgWWWGVLVLALGAISav 288
|
90 100 110
....*....|....*....|....*....|....
gi 452849313 257 -GVVVSFIcfrQVDLKSLIAYSSVAHMSMVIGGL 289
Cdd:PRK06521 289 lGVLYALA---EHDLKRLLAYSTIENIGIIFVGL 319
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
61-359 |
7.32e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 51.36 E-value: 7.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 61 LILLSF-WVCSLMITASSSIYLSSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLIlGWGYQPERLQA 139
Cdd:PRK06589 89 LLLIGFlWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNNISLSG 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 140 GI-YLIFYTLVASLPLLLVLFKVYDCSHTLYFPLLSDFGSFYFLFYLFIVLAFLIKMPMFLVHLWLPKAHVEAPISGSMI 218
Cdd:PRK06589 168 GYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALL 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 219 LAGVLLKLGGYGIFRV------MKIISFLGLSFNYFWLALGLSgGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTM 292
Cdd:PRK06589 248 HAVIVVKTGLFCIYKIllyifgLSYLQRIFAEFNWLIFIPIVS-IFYSSLKALKTDNIKKILAYSTISQLSLALLSAFIL 326
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 452849313 293 NWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPP 359
Cdd:PRK06589 327 TPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPI 393
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-341 |
3.00e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 49.33 E-value: 3.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 113 YIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPLLSDFGSFYFLFYLFIVLAFL 192
Cdd:PRK08376 147 FVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 193 I-----KMPMFLVHLWLPKAHVEAPISGSMILagVLLKLGG-YGIFRVmkiisflglSFNYFWLALGLS--GGVVVSFIC 264
Cdd:PRK08376 227 IaglamKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARV---------LFSIYGPAINLAtvGWVIIILGC 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 265 FR----------QVDLKSLIAYSSVAH---------MSMVIGGLMTMNWWGCM---GSLCLMIGHGLCSSGMFCLSNIIY 322
Cdd:PRK08376 296 LTmfvgvamavvQKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVI 375
|
250
....*....|....*....
gi 452849313 323 ERLGSRSLLINKGMINLMP 341
Cdd:PRK08376 376 YETGTRNLNELGGLARTMP 394
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-359 |
3.16e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 43.01 E-value: 3.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 52 FGVDYFSFGLILLSFWVCSLMITASSSIYLSSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWG 131
Cdd:PRK07691 73 FVADMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 132 YQPErLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPLLS---------DFGSFYFLFYLFIVLaFLIKMPMFLVHL 202
Cdd:PRK07691 153 TKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISvkiaelsagQTGLITVVAILFLFV-FATKAGLFPLYF 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 203 WLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLSFNYfwLALGLSGGVVVSFICF---RQVDLKSLIAYSSV 279
Cdd:PRK07691 231 WLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTH--YLILILALLTIIFGVIgavAYFDIKKIIIYNIM 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 280 AHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMAlWWFLLSSSNMAAPP 359
Cdd:PRK07691 309 IAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLG-WMFFIAALSLAGIP 387
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
134-359 |
5.07e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 42.27 E-value: 5.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 134 PERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPLLSDF-GSFYFLFYLFIVLAFLIKMPMFLVHLWLPKAhVEAP 212
Cdd:PRK06525 159 PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLhGSLKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 213 ISGSMIL-AGVLLKLGGYGIFRVMKIISFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMT 291
Cdd:PRK06525 238 TPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSL 317
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 452849313 292 M---NWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPP 359
Cdd:PRK06525 318 AilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
188-359 |
1.97e-03 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 40.80 E-value: 1.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 188 VLAFLI------KMPMFLVHLWLPKAHVEA-PIS-----GSMILAGVLLKLGGYGIFRVMKIisflglsFNYFWLALGLS 255
Cdd:PRK12650 209 VVAVLIavaaftKSAQFPFHFWLPEAMAAItPVSaflhaAAVVKAGIYLLLRFSPVFHDVAV-------WNWLLIIVGMI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 256 GGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKG 335
Cdd:PRK12650 282 TALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGS 361
|
170 180
....*....|....*....|....
gi 452849313 336 MINLMPsMALWWFLLSSSNMAAPP 359
Cdd:PRK12650 362 LWRRMP-FTFVSVTIAALSMAAVP 384
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-359 |
2.03e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 40.67 E-value: 2.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 52 FGVDyFSFGLILLSFwVCSLMIT-------ASSSIYLSSYH--SSIFVFIVLFLMIMLyCSFSSLSLLSFYIFFEASLIP 122
Cdd:PRK12647 54 LGVN-LSFLLDGLSL-TFALLITgigtlivLYAGGYLKGHPdlGRFYSYILLFMASML-GLVLSDNLITLFVFWELTSIT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 123 TLLLIlgwGYQPER-------LQAgiylIFYTLVASLPLLLVLFKVYDCSHTLYFPLLSDFG------SFYFLFYLFIVL 189
Cdd:PRK12647 131 SFLLI---GFNHEReaarraaLQA----LLVTGGGGLALLAGLILLGNVTGTYSLSELLASGdvirehPLYLAILLLVLG 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 190 AFLIKMPMFLVHLWLPKAhVEAPI-------SGSMILAGVLLklggygifrVMKIISFLGLSFNYFWLaLGLSGG---VV 259
Cdd:PRK12647 204 GAFTKSAQFPFHFWLPNA-MEAPTpvsaylhSATMVKAGIYL---------LARLNPVLGGTPLWQTI-LPLFGGltmLT 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 260 VSFICFRQVDLKSLIAYSSVahmsMVIGGLMTMNWWGC----MGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKG 335
Cdd:PRK12647 273 GALLAVRQTDLKLILAYSTV----SALGTLVMLLGLGSelaiKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGG 348
|
330 340
....*....|....*....|....
gi 452849313 336 MINLMPSMALWWFLLSSSNMAAPP 359
Cdd:PRK12647 349 LRRAMPITAAAALLAALSMAGLPP 372
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
113-359 |
3.04e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 39.93 E-value: 3.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 113 YIFFEASLIPTLLLILgWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDCSHTLYFPLLS-------DFGSFYFLFYL 185
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAmrlndmgDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 186 FIvLAFLIKMPMFLVHlWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKII----SFLGLSFNYFWLALGLSGGVVVS 261
Cdd:PRK12663 213 FL-LAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqeRELLHPLLATMAAITMVIGALGA 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 262 FIcfrQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMP 341
Cdd:PRK12663 291 LA---YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEP 367
|
250
....*....|....*...
gi 452849313 342 SMALWWFLLSSSNMAAPP 359
Cdd:PRK12663 368 LFGALFLILIFAIGGLPP 385
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-359 |
3.37e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 39.81 E-value: 3.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 200 VHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFrvmkIISFLGLSFNYFWLALGLSGGVVVSFI----CFRQVDLKSLIA 275
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGIL----TLSLLGGNAPLWWGVALLVLGMITAFVgglyALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 276 YSSVAHMSMVIGGL-----------MTMNWWGCMGSLCLMIGHGLCSSGMFCLSNIIYERLGSRSLLINKGMINLMPSMA 344
Cdd:PRK08042 275 YHTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*
gi 452849313 345 LwWFLLSSSNMAAPP 359
Cdd:PRK08042 355 I-AMLVGLMAMAALP 368
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
113-292 |
5.26e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 39.43 E-value: 5.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 113 YIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYT------LVASLPLLLVLFKVYDCSHTLYFPLLSDFGSFYFLFYLF 186
Cdd:PRK12649 137 FIFWELTSITSFMLIGYWRHRPESVYGATKSLLITaggglfMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLIT 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 187 IVLAFL---IKMPMFLVHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRVMKIisflgLSFNYFWLAL----GLSGGV 258
Cdd:PRK12649 217 LILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPI-----FSGTEAWFILvsgtGMITMV 290
|
170 180 190
....*....|....*....|....*....|....
gi 452849313 259 VVSFICFRQVDLKSLIAYSSVAHMSMviggLMTM 292
Cdd:PRK12649 291 LAGFLAFRQTDIKAILAYSTISQLAY----LMTM 320
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
61-285 |
6.25e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 38.61 E-value: 6.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 61 LILLSFWVCSLMITASSSI-YLSSYHSSIFVFIVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQA 139
Cdd:PRK06591 88 LVLLFFLVFCHKITNQTILkYINNNRKSLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGA 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 452849313 140 GIYLIFYTLVASLPLLLVLF--------KVYDCSHTLYFPLLSDFGSFYFLFYLfivLAFLIKMPMFLVHLWLPKAHVEA 211
Cdd:PRK06591 168 FDYLIMGSIGATLILIAIGFllsitgslNMTDIAAYLQEHTNSRIITIAIGFFL---IGAILKTAFFPMHFWMMRAYNNT 244
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 452849313 212 PISGSMILAGVLLKLGGYGIFRVMKII---SFLGLSFNYFWLALGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMV 285
Cdd:PRK06591 245 ASVILVYLAGISTIIGIYIIYKFTYIIigyETIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYV 321
|
|
| |
