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Conserved domains on  [gi|470235849|ref|YP_007627024|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Lentula callani]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009588)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 5.71e-41

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 131.52  E-value: 5.71e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   1 MMNLITSFLITITLPMLIMLIALTLSKKMINDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIII 80
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 470235849  81 MKSSNLMVWMMSISFFIMILILGLYHEWNQGALQWE 116
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 5.71e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 131.52  E-value: 5.71e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   1 MMNLITSFLITITLPMLIMLIALTLSKKMINDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIII 80
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 470235849  81 MKSSNLMVWMMSISFFIMILILGLYHEWNQGALQWE 116
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.19e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.41  E-value: 1.19e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   19 MLIALTLSKKmINDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIIIMKsSNLMVWMMSISFFIM 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 470235849   99 ILILGLYHEWNQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-115 1.79e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 89.80  E-value: 1.79e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   1 MMNLITSFLITITLPMLIMLIALTLSKKM---INDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPT 77
Cdd:COG0838    1 MLSDYLPILIFLLVALGLALAMLLLSRLLgpkRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPW 80

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 470235849  78 IIIMKSSNLMVwMMSISFFIMILILGLYHEWNQGALQW 115
Cdd:COG0838   81 AVVFRELGWFG-LIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 5.71e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 131.52  E-value: 5.71e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   1 MMNLITSFLITITLPMLIMLIALTLSKKMINDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIII 80
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 470235849  81 MKSSNLMVWMMSISFFIMILILGLYHEWNQGALQWE 116
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-115 2.28e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 125.10  E-value: 2.28e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   1 MMNLITSFLITITLPMLIMLIALTLSKKMINDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIII 80
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 470235849  81 MKSSNLMVWMMSISFFIMILILGLYHEWNQGALQW 115
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 1.99e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 122.58  E-value: 1.99e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   3 NLITSFLITITLPMLIMLIALTLSKKMINDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIIIMK 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 470235849  83 SSNLMVWMMSISFFIMILILGLYHEWNQGALQW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 7.69e-33

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 111.10  E-value: 7.69e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   1 MMNLITSFLITITLPMLIMLIALTLSKKMINDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIII 80
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 470235849  81 MKSSNLMVWMMSISFFIMILILGLYHEWNQGALQW 115
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 2-115 7.08e-31

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 105.79  E-value: 7.08e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   2 MNLITSFLITITLPMLIMLIALTLSKKMINdREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIIIM 81
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                         90       100       110
                 ....*....|....*....|....*....|....
gi 470235849  82 KSSNLMVWMMSISFFIMILILGLYHEWNQGALQW 115
Cdd:MTH00106  80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEW 113
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 2-115 7.32e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 100.76  E-value: 7.32e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   2 MNLITS-FLITITLPMLIMLIALTLSKkMINDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIII 80
Cdd:MTH00136   1 MNLITTiLTITIALSLILAIVSFWLPQ-MTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 470235849  81 MKSSNLMVWMMSISFFIMILILGLYHEWNQGALQW 115
Cdd:MTH00136  80 DQLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEW 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 6.56e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 98.52  E-value: 6.56e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   1 MMNLITSFLITITLPMLIMLIALTLSKKMInDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIII 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 470235849  81 MKSSNLMVWMMSISFFIMILILGLYHEWNQGALQW 115
Cdd:MTH00042  80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEW 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 1.85e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 97.26  E-value: 1.85e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   2 MNLITSFLITITLPMLIMLIALTLSKkMINDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIIIM 81
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 79

                         90       100       110
                 ....*....|....*....|....*....|....
gi 470235849  82 KSSNLMVWMMSISFFIMILILGLYHEWNQGALQW 115
Cdd:MTH00113  80 NLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.19e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.41  E-value: 1.19e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   19 MLIALTLSKKmINDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIIIMKsSNLMVWMMSISFFIM 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 470235849   99 ILILGLYHEWNQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 4-115 9.76e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 90.44  E-value: 9.76e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   4 LITSFLITITLPMLIMLIALTLSKkMINDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIIimkS 83
Cdd:MTH00069   2 IMLMLLISTILSLILITISFWLPL-NNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPW---A 77

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 470235849  84 SNLMVWMMSISFFIMILIL---GLYHEWNQGALQW 115
Cdd:MTH00069  78 SQLNTPTNTLFWSTLILILltlGLIYEWIQGGLEW 112
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-115 1.38e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 89.96  E-value: 1.38e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   1 MMNLITSFLITITLPMLIMLIALTLSKkMINDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIII 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPK-VNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 470235849  81 MKSSNlmVWMMSISFFIMILILGLYHEWNQGALQW 115
Cdd:MTH00203  80 NQLSS--LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-115 1.79e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 89.80  E-value: 1.79e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   1 MMNLITSFLITITLPMLIMLIALTLSKKM---INDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPT 77
Cdd:COG0838    1 MLSDYLPILIFLLVALGLALAMLLLSRLLgpkRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPW 80

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 470235849  78 IIIMKSSNLMVwMMSISFFIMILILGLYHEWNQGALQW 115
Cdd:COG0838   81 AVVFRELGWFG-LIEMLVFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-116 3.48e-24

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 89.15  E-value: 3.48e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   8 FLITITLPMLIMLIALTLSKKMiNDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMP-TIIIMKSSNL 86
Cdd:PRK06602  15 LIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPwAVSFREIGWL 93

                         90       100       110
                 ....*....|....*....|....*....|
gi 470235849  87 MVWMMSIsfFIMILILGLYHEWNQGALQWE 116
Cdd:PRK06602  94 GFVEAMI--FILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 2-116 9.11e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 80.11  E-value: 9.11e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   2 MNLITSFLITITLPMLIMLIALTLSKKmINDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIIIM 81
Cdd:MTH00018   1 YGLFILLIFSVVLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLY 79

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 470235849  82 KSSNLM-VWMMSIsfFIMILILGLYHEWNQGALQWE 116
Cdd:MTH00018  80 NQIAPFgFWTMVG--FLFILTLGLIYEWIKGGLEWE 113
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 1-116 9.19e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 77.83  E-value: 9.19e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   1 MMNLITSFLITITLPMLIMLIALTLSKKMiNDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIII 80
Cdd:MTH00055   5 FLGIFILLLFSIGLSTVISGASYIVGVKQ-PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVV 83

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 470235849  81 MKSSNLM-VWMMSIsfFIMILILGLYHEWNQGALQWE 116
Cdd:MTH00055  84 YNQIGLFgFWVMYL--FLIILTIGLIYEWVKGGLEWE 118
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 7-116 8.36e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 70.35  E-value: 8.36e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   7 SFLITITLPMLIMLIALTLSKKMIN----DREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIIIMK 82
Cdd:MTH00030  11 STLLGVGIILLLVSISFTLGNSRIGltkpDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFN 90

                         90       100       110
                 ....*....|....*....|....*....|....
gi 470235849  83 SSNLMVWMMSISFFImILILGLYHEWNQGALQWE 116
Cdd:MTH00030  91 QLNLFSFWIVYTFLI-VLAIGLAYEWIKGGLEWD 123
ndhC CHL00022
NADH dehydrogenase subunit 3
 7-115 3.69e-13

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 60.77  E-value: 3.69e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   7 SFLITITLPMLIMLIALTLSKKMINDR---EKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIIIMKS 83
Cdd:CHL00022   9 IFWAFLIISSLIPILAFLISGLLAPISkgpEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDV 88

                         90       100       110
                 ....*....|....*....|....*....|..
gi 470235849  84 SNLMVWMMSIsFFIMILILGLYHEWNQGALQW 115
Cdd:CHL00022  89 LGVSAFIEAL-IFVLILIVGLVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
9-115 1.41e-10

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 54.36  E-value: 1.41e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   9 LITITLPMLIMLIALTLSKKM---INDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIIIMKSSN 85
Cdd:PRK07756  13 LIFLLLGILLPVVALTLGRMLrpnKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLG 92

                         90       100       110
                 ....*....|....*....|....*....|
gi 470235849  86 LMVwMMSISFFIMILILGLYHEWNQGALQW 115
Cdd:PRK07756  93 LFA-LIEMLIFVVMLLVGLAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
8-117 2.20e-10

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 53.90  E-value: 2.20e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   8 FLITITLPMLIMLIALTLSKKMIN---DREKSSPFECGFDP-KSSARMpfSIRFFLIAVIFLIFDVEIVLIMPTIIIMKS 83
Cdd:PRK08489  17 LVLTFVAFFLTTRLARFISRKLAQkntEKLKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFKL 94

                         90       100       110
                 ....*....|....*....|....*....|....
gi 470235849  84 SNLMVwMMSISFFIMILILGLYHEWNQGALQWEN 117
Cdd:PRK08489  95 LGLFG-LIEMLLFIVLLTIGFIYAWKKGALEWQS 127
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 32-116 1.85e-08

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 48.51  E-value: 1.85e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849  32 DREKSSPFECGFDPKSSARMP--FSIRFFLIAVIFLIFDVEIVLIMPTIIIMKSSNLMVWMMSISFFIMILILGLYhEWN 109
Cdd:PRK07928  34 NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFGLVEMALFMLTVFVAYAY-VWR 112


                 ....*..
gi 470235849 110 QGALQWE 116
Cdd:PRK07928 113 RGGLEWD 119
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 1.42e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 43.34  E-value: 1.42e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   1 MMNLITSFLITITLPMLIMLIALTLSKKMiNDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIII 80
Cdd:MTH00092   1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 470235849  81 MKSSNLMVWMmsisfFIMILILGLYHEWNQGALQW 115
Cdd:MTH00092  80 DFSSLISFFM-----LMIFIFFGFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 1-115 4.12e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.18  E-value: 4.12e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849   1 MMNLITSFLITITLPMLIMLIALTL--SKKMINDREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLI--MP 76
Cdd:MTH00060   1 MLVLLFVFFVFFLLFLVIYFFHSGLwnNKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLlnMP 80

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 470235849  77 TIIIMkSSNLMVWMmsisFFIMILILGLYHEWNQGALQW 115
Cdd:MTH00060  81 FQGLL-FYNFWYYY----FFLLLLFLGFVVELFSGYVRW 114
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 32-115 4.28e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 37.48  E-value: 4.28e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235849  32 DREKSSPFECGFDPKSSARMPFSIRFFLIAVIFLIFDVEIVLIMPTIIIMKSSNLMVWMMSISFFIMILiLGLYHEWNQG 111
Cdd:PRK06432  60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPFIETLIFLAMPL-FAVYYAFKMG 138


                 ....
gi 470235849 112 ALQW 115
Cdd:PRK06432 139 YMRW 142
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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