|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 749.41 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 1 MLKFIIPTIMLLPVTWYSNNSMIWINTTSHSLMISFMGLFLLNYPSDSNNNFSLSFSSDPLSSPLLMLTMWLLPLMIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 81 QHHLAKEPWFRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 161 LLALTYLQSSMGSLNLLTTNLWLKEMPNSWSTNLLWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 241 YGMMRISMFLDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 321 LTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 529217162 401 LITALYSLYMLITTQRGKLTYHLHNLSPSLTRENTLMSMHMLPLLLLTLNPKIILGSTL 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 602.19 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 1 MLKFIIPTIMLLPVTWYSNNSMIWINTTSHSLMISFMGLFLLNYPSDSNNNFSLSFSSDPLSSPLLMLTMWLLPLMIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 81 QHHLAKEPWFRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 161 LLALTYLQSSMGSLNLLTTNLWLKEMPNSWSTNLLWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 241 YGMMRISMFLDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 321 LTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLNM 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 529217162 401 LITALYSLYMLITTQRGKLTYHLHNLSPSLTRENTLMSMHMLPLLLLTLNPKIILG 456
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISG 456
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 561.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 1 MLKFIIPTIMLLPVTWYSNNSMIWINTTSHSLMISFMGLFLLNYPSDSNNNFSLSFSSDPLSSPLLMLTMWLLPLMIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 81 QHHLAKEPWFRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 161 LLALTYLQSSMGSLNLLTTNLWLKEMPNSWSTNLLWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 241 YGMMRISMFLDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 321 LTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLNM 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 529217162 401 LITALYSLYMLITTQRGKLTYHLHNLSPSLTRENTLMSMHMLPLLLLTLNPKIILG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
5.10e-170 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 485.61 E-value: 5.10e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 1 MLKFIIPTIMLLPVTWYSNNSMIWINTTSHSLMISFMGLFLLNYPSDSNNNFSLSF-SSDPLSSPLLMLTMWLLPLMIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYmATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 80 SQHHLAKEPWFRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 160 LLLALTYLQSSMGSLNLLTTNLWLKEMPNSWSTNLLWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 240 GYGMMRISMFLDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 320 GLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430
....*....|....*....|....*....|....
gi 529217162 400 MLITALYSLYMLITTQRGKLTYHLHNLSPSLTRE 433
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTRE 434
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
3.39e-157 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 452.86 E-value: 3.39e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 3 KFIIPTIMLLPVTWYSNNSMIWINTTSHSLMISFMGLFLLNYPSDSNNNFS-LSFSSDPLSSPLLMLTMWLLPLMIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSnLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 82 HHLAKEPWFRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 162 LALTYLQSSMGSLNLLTTNLWLKEmpnSWSTNLLWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 242 GMMRISMFLDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 322 TSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLNML 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 529217162 402 ITALYSLYMLITTQRGKLTYHLHNLSPSLTRENTLMSMHMLPLLLLTLNPKII 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
5.58e-141 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 411.68 E-value: 5.58e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 1 MLKFIIPTIMLLPVTWYSNNSMIWINTTSHSLMISFMGLFLLNYPSDSN-NNFSLSFSSDPLSSPLLMLTMWLLPLMIMA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSwHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 80 SQHHLAKEPWFRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 160 LLLALTYLQSSMGSLNLLTTNLWLKEMPNSWSTNLLWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 240 GYGMMR-ISMFLDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIA 318
Cdd:MTH00044 241 GYGLIRlINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 319 HGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 529217162 399 NMLITALYSLYMLITTQRGKLTYHLHNLSPSLTRENTLMSMHMLPLLLLTLNPKIIL 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
2.16e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 335.59 E-value: 2.16e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 1 MLKFIIPTIMLLPVTWYSNNSMIWINttshSLMISFMGLFLLNYPSDSNNNFSLSFSSDPLSSPLLMLTMWLLPLMIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQS----LLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 81 QHHLAKEpwFRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLPL 160
Cdd:MTH00163 77 ESVYKKN--NYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 161 LLALTYLQSSMGSLNLLTTnlwlkeMPNSWSTNLLWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLL------NFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 241 YGMMRISMFLDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 321 LTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLNM 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430
....*....|....*....|....*....|...
gi 529217162 401 LITALYSLYMLITTQRGKLTYHLHNLSPSLTRE 433
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVRE 421
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
37-435 |
3.98e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 316.01 E-value: 3.98e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 37 MGLFLLNYPSDSNNNFSLSFSSDPLSSPLLMLTMWLLPLMIMASQHHLAKEPWFRKKSYLSLLITLqmFLIMTFTATELI 116
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCL--ILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 117 LFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEMPNSWstnLLW 196
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 197 LACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPFLMLCLWGMIMTSSIC 276
Cdd:MTH00150 156 LLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLIC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 277 LRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMA 356
Cdd:MTH00150 236 LRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLS 315
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 529217162 357 TWWLLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLNMLITALYSLYMLITTQRGKLTYHLHNLSPSLTRENT 435
Cdd:MTH00150 316 LWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEML 394
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
21-420 |
1.19e-101 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 310.76 E-value: 1.19e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 21 SMIWINTTSHSLMISFMGLFLLNYPSDSNNNFSLSFSSDPLSSPLLMLTMWLLPLMIMASQHHLAKEpwFRKKSYLSLLI 100
Cdd:MTH00205 18 FKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 101 TLQMFLIMTFTATELILFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTN 180
Cdd:MTH00205 96 MLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 181 LWLKEMPNSWstnLLWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYP 260
Cdd:MTH00205 176 PLNFSDFYLF---LYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSEL 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 261 FLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSR 340
Cdd:MTH00205 253 FFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSR 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 341 TMLMARGLQTLLPLMATWWLLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLNMLITALYSLYMLITTQRGKLT 420
Cdd:MTH00205 333 SMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVS 412
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
2.44e-96 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 297.42 E-value: 2.44e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 1 MLKFIIPTIMLLPVTWYSNNSmIWINTTSHSLMISFMGLFLLNYPSDSNNNFSLSFSSDPLSSPLLMLTMWLLPLMIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPW-SWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 81 QHHLAKEPWfrKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLPL 160
Cdd:MTH00014 80 FKIFQNNKA--PKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 161 LLALTYLQSSMGSLNLLTTNLwlkEMPNSWSTNLLWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSM---EPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 241 YGMMRISMFLDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 321 LTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLNM 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 529217162 401 LITALYSLYMLITTQRGKLTYHLHNLSPSLTRENTLMSMHMLPLLLLTLNPKII 454
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
51-433 |
1.27e-78 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 252.69 E-value: 1.27e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 51 NFSLSFSSDPLSSPLLMLTMWLLPLMIMASQHHLAKepwfRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTL 130
Cdd:COG1008 73 GISYHLGVDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 131 IVITRWGNQtERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEMPNSWSTnLLWLACTMAFMVKMPLY 210
Cdd:COG1008 149 FLIGIWGGE-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQL-LLFLAFFIAFAVKVPMF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 211 GLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDP-TTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYS 289
Cdd:COG1008 227 PFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 290 SVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLAL 369
Cdd:COG1008 307 SVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGL 386
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 529217162 370 PPSINLIGELLVTITSFSWSNITVILIGLNMLITALYSLYMLittQR---GKLTYHLHNLSPSLTRE 433
Cdd:COG1008 387 PGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY---QRvffGPLKEELAELPDLNPRE 450
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
59-411 |
1.27e-71 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 234.06 E-value: 1.27e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 59 DPLSSPLLMLTMWLLPLMIMASQHHLAKepwfRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLIVITRWGN 138
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 139 QTeRLSAGLYFLFYTLVGSLPLLLALTYlQSSMGSLNLLTTNLWLKEMPNSWSTnLLWLACTMAFMVKMPLYGLHLWLPK 218
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAILG-LYFLGGGTFDLLELLNLPLPFGVQT-WLFLAFFIAFAVKVPLFPLHTWLPD 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDP-TTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:TIGR01972 229 AHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 298 IVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPPSINLIG 377
Cdd:TIGR01972 309 LLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
|
330 340 350
....*....|....*....|....*....|....
gi 529217162 378 ELLVTITSFSWSNITVILIGLNMLITALYSLYML 411
Cdd:TIGR01972 389 EFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
59-410 |
1.29e-71 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 234.71 E-value: 1.29e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 59 DPLSSPLLMLTMWLLPLMIMASQHHLAKepwfRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLIVITRWGn 138
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 139 QTERLSAGLYFLFYTLVGSLPL----LLALTYLQSSMGSLNLLTTNLWlkEMPNSWSTnLLWLACTMAFMVKMPLYGLHL 214
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFDIADLLNL--PLPPGVQY-WLFLAFFIAFAVKMPMFPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 215 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPFLM-LCLWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIItLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 294 MALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPPSI 373
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
330 340 350
....*....|....*....|....*....|....*..
gi 529217162 374 NLIGELLVTITSFSWSNITVILIGLNMLITALYSLYM 410
Cdd:PRK05846 393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWL 429
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
56-410 |
2.73e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 220.31 E-value: 2.73e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 56 FSSDPLSSPLLMLTMWLLPLMIMASQHHLAkepwFRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLIVITR 135
Cdd:MTH00217 76 FAVDGISIFFLILTALLTPICILISWNSIK----FLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 136 WGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEmpnSWSTNLLWLACTMAFMVKMPLYGLHLW 215
Cdd:MTH00217 152 WGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIE---KELQYFIFLGFFLSLAIKIPKIPFHIW 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 216 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPFLM-LCLWGMIMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:MTH00217 229 LPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQtLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHM 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 295 ALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPPSIN 374
Cdd:MTH00217 309 GLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCN 388
|
330 340 350
....*....|....*....|....*....|....*.
gi 529217162 375 LIGELLVTITSFSWSNITVILIGLNMLITALYSLYM 410
Cdd:MTH00217 389 FVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
53-410 |
2.01e-64 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 215.31 E-value: 2.01e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 53 SLSFSSDPLSSPLLMLTMWLLPLMIMASQHHLAkepwFRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLIV 132
Cdd:MTH00204 76 PLVFAVDGVSLFFILLTTLLIPICILISWKSIK----FLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 133 ITRWGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWlkEMPNSWSTNLLwLACTMAFMVKMPLYGL 212
Cdd:MTH00204 152 IGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNI--KLPLSIQKWLL-VGFFLSLAVKIPQIPF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 213 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPF-LMLCLWGMIMTSSICLRQTDLKSLIAYSSV 291
Cdd:MTH00204 229 HIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLiVMLSVIAVIYGSLTTCRQVDFKRLIAYSSV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 292 SHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPP 371
Cdd:MTH00204 309 AHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPL 388
|
330 340 350
....*....|....*....|....*....|....*....
gi 529217162 372 SINLIGELLVTITSFSWSNITVILIGLNMLITALYSLYM 410
Cdd:MTH00204 389 SCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
2.00e-63 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 206.78 E-value: 2.00e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 112 ATELILFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEMPNSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 192 TNLLWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPFLMLCLWGMIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 272 TSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANS-NYERIHSRTMLMARGLQT 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 529217162 351 LLPLMATWWLLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGL 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
54-409 |
2.61e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 210.55 E-value: 2.61e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 54 LSFSSDPLSSPLLMLTMWLLPLMIMASQHHLAkepwFRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLIVI 133
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWHSVK----YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 134 TRWGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEMPNSwSTNLLWLACTMAFMVKMPLYGLH 213
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQ-TQKWIFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 214 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPT-TKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVS 292
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 293 HMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPPS 372
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350
....*....|....*....|....*....|....*..
gi 529217162 373 INLIGELLVTITSFSWSNITVILIGLNMLITALYSLY 409
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
52-411 |
3.03e-43 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 159.04 E-value: 3.03e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 52 FSLSFSSDPLSSPLLMLTMWLLPLMIMASQHhLAKEPwfrkKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLI 131
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 132 VITRWGNQtERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEMPNSWSTnLLWLACTMAFMVKMPLYG 211
Cdd:PRK12561 126 LISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALEL-LLYAGFLIAFGVKLPIFP 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 212 LHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPFLM-LCLWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK12561 204 LHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAiLGVVNIIYGALNAFAQDNVKRRLAYSS 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 291 VSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALP 370
Cdd:PRK12561 284 VSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALP 363
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 529217162 371 PSINLIGELLV-------TITSFSWSNITVILIGLNMLITALYSLYML 411
Cdd:PRK12561 364 GMSGFVSELTVflgitssDVYSSTFRTITILLAAVGLILTPIYLLSML 411
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
102-418 |
8.45e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 153.14 E-value: 8.45e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 102 LQMFLIMTFTATELILFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLPLLLALtylqssmgSLNLLTTNL 181
Cdd:MTH00094 71 LILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVY--------LKNFFFFSL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 182 WLKEMPNSWSTNLLwlaCTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTtksMAYPF 261
Cdd:MTH00094 143 CYFDFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFW 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 262 LMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRT 341
Cdd:MTH00094 217 IIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRL 296
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 529217162 342 MLMARGLQTLLPLMATWWLLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLNMLITALYSLYMLITTQRGK 418
Cdd:MTH00094 297 IYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGK 373
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
40-430 |
2.48e-41 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 153.70 E-value: 2.48e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 40 FLLNYPSDSNNNFSLSFSSDPLSSPLLMLTMWLLPLMIMASQHHLAkepwfRKKSYLSLLITLQMFLIMTFTATELILFY 119
Cdd:PRK06473 59 FTEFIPWIDSLGLSYHLGVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFF 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 120 ILFEATLIPTLIVITRWGNQtERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEMPNSwSTNLLWLAC 199
Cdd:PRK06473 134 LFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPI 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 200 TMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPFL-MLCLWGMIMTSSICLR 278
Cdd:PRK06473 212 LVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIA 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 279 QTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGL---QTLLPLM 355
Cdd:PRK06473 292 QKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPIT 371
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 529217162 356 ATWWLLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLNMLITALYSLYMLITTQRGKLTYHLHNLSPSL 430
Cdd:PRK06473 372 GSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVL 446
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-415 |
1.43e-38 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 144.90 E-value: 1.43e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 52 FSLSFSSDPLSSPLLMLTMWLLPLMIMASQHHLAKEPwfRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLI 131
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYG 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 132 VITRWGNQtERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEMPNSWSTnLLWLACTMAFMVKMPLYG 211
Cdd:COG0651 146 LVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLL-AAFALLLVGFGIKAALFP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 212 LHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPFLMLCLWG--MIMTSSICLRQTDLKSLIAYS 289
Cdd:COG0651 224 LHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFLGTLLLVLGLltMLVGALGALAQRDLKRLLAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 290 SVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLAL 369
Cdd:COG0651 304 SVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGL 383
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 529217162 370 PPSINLIGELLVTITSFSWSN-ITVILIGLNMLITALYSLYMLITTQ 415
Cdd:COG0651 384 PPLSGFVSKWLLLQAALEAGAwLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-411 |
1.22e-35 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 138.30 E-value: 1.22e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 55 SFSSDPLSSPLLMLTMWLLPLMIMASqhhlakepW---FRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLI 131
Cdd:PRK02546 82 SVGADGLSMPLILLTGFITTLAVLAA--------WpvtFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 132 VITRWGNQtERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEMPNSWStNLLWLACTMAFMVKMPLYG 211
Cdd:PRK02546 154 LLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQ-LLCYAGLLIAYGVKLPIVP 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 212 LHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPFL-MLCLWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK02546 232 LHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVNIIYAALTSFAQRNLKRKIAYSS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 291 VSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALP 370
Cdd:PRK02546 312 ISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALP 391
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 529217162 371 PSINLIGELLVTIT-------SFSWSNITVILIGLNMLITALYSLYML 411
Cdd:PRK02546 392 GMSGFVAELMVFVGfatsdayTLPFRVVVVFLAAVGVILTPIYLLSML 439
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
107-411 |
5.43e-35 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 136.23 E-value: 5.43e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 107 IMTFTATELILFYILFEATLIPTLIVITRWGNQtERLSAGLYFLFYTLVGSLPLLLALTylqsSMGSLNLLTTNLWLKEM 186
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVL----GMGLYGSNEPTLNFETL 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 187 PN-SWSTNL---LWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPFL 262
Cdd:CHL00011 201 ANqSYPVALeilFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWL 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 263 MLC-LWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIhsRT 341
Cdd:CHL00011 281 VIVgAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RL 358
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 529217162 342 MLMAR--GLQTLLPLMATWWLLASLTNLALPPSINLIGELLV---TITSFSWSNITVILI----GLNMLITALYSLYML 411
Cdd:CHL00011 359 VYLDEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVffgIITSQKYLLMPKILItfvmAIGMILTPIYLLSML 437
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
53-435 |
1.34e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 126.75 E-value: 1.34e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 53 SLSFSSDPLSSPLLMLTMWLLPLMIMASQHHLAkepwfRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLIV 132
Cdd:PRK07363 72 SYSLGVDGLSLPLLVLNSLLTWIAIYSIGENTE-----RPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 133 ITRWGNQtERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEMPNSWSTNLLwLACTMAFMVKMPLYGL 212
Cdd:PRK07363 147 IAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILL-TGLLLGFGIKIPLVPL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 213 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPflMLCLWGMIMT---SSICLRQTDLKSLIAYS 289
Cdd:PRK07363 225 HTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTISViygALSAIAQKDIKRMVAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 290 SVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTL---LPLMATWWLLASLTN 366
Cdd:PRK07363 303 SIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMAS 382
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 529217162 367 LALPPSINLIGELLVTITSFSWSNITVILIGLNMLITALYSLYMLITTQRGKLTYHLHNLSPSLTRENT 435
Cdd:PRK07363 383 AGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYYPKVLWSEKI 451
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
5.52e-24 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 96.05 E-value: 5.52e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 1 MLKFIIPTIMLLPVTWYSNNSMIWINTTSHSLMISFMGLFLLNYPSDSN-NNFSLSFSSDPLSSPLLMLTMWLLPLMIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSwSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 529217162 80 SQHHLAKEPWFRKKSYLSLLITLQMFLIMT 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-413 |
2.26e-20 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 93.46 E-value: 2.26e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPFLMLC--LWGMIMTSSICLRQTDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIfgLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 284 SLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLAS 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 529217162 364 LTNLALPPSINLIGELLVTITSFSWSNITVILIGLNMLITALYSLYMLIT 413
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVA 436
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
202-406 |
2.62e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 90.32 E-value: 2.62e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 202 AFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISM----FLDPTTKSMAYPFLMLCLWGMIMTSSICL 277
Cdd:PRK08375 211 ALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAVLALLSMLVGSLAAL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 278 RQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMAT 357
Cdd:PRK08375 291 GQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAA 370
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 529217162 358 WWLLASLTNLALPPSINLIGELLVTITSFS---WSNITVILIGlnMLITALY 406
Cdd:PRK08375 371 AFAVASLSLIGVPPTSGFVSKWYLVVGAVEagqWLVLAVLLAS--SLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
190-429 |
5.78e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 86.18 E-value: 5.78e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 190 WSTNLLWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI-------SMFLDPTTKSMAYPFL 262
Cdd:PRK12667 220 LALGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 263 MLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTM 342
Cdd:PRK12667 300 ILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDI 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 343 LMARGLQTLLPLMATWWLLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLNMLITALYS----LYMLITTQRGK 418
Cdd:PRK12667 380 DELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGyfraWYSLFFGKPKS 459
|
250
....*....|.
gi 529217162 419 LTYHLHNLSPS 429
Cdd:PRK12667 460 GEEVEHKESPS 470
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
203-414 |
2.09e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 69.01 E-value: 2.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 203 FMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPFLMLCLwGMIMTSSIC---LRQ 279
Cdd:PRK08676 216 FLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQ 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 280 TDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWW 359
Cdd:PRK08676 295 RNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGV 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 529217162 360 LLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLNMLITALYSLYMLITT 414
Cdd:PRK08676 375 ILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKA 429
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
104-327 |
2.59e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 68.87 E-value: 2.59e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 104 MFLIMT-------FTATELILFYILFEATLIPTLIVITRwGNQTERLSAGLYFLFyTLVGSLPLLLALTYLQSSMGSLNL 176
Cdd:PRK08668 102 MFALMSlagvlgvFLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDF 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 177 LTTNlwlKEMPNSWSTNLLW---LACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMrISMFLDPT 253
Cdd:PRK08668 180 ADIS---QGLINDTSTGFALivfLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPG 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 254 TK------------SMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGL 321
Cdd:PRK08668 256 TKlfsefgtyrgvpLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHAL 335
|
....*.
gi 529217162 322 TSSMLF 327
Cdd:PRK08668 336 FKGLFF 341
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
52-386 |
1.07e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 67.06 E-value: 1.07e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 52 FSLSFSSDPLSSPLLMLTMWLLPLMIMASQHHLAKEPWFRKKSYLSLLITLQMF-LIMTFTATELILFYILFEATLIPTL 130
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 131 IVITRWGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEMPnswstnLLWLACTMAFMVKMPLY 210
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILS------LVFLLLFLGFGIKAGII 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 211 GLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIsmFLDPTTKSMAYPFLMLCLwGMI---MTSSICLRQTDLKSLIA 287
Cdd:PRK08667 223 PFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRF--LMDVLSPELWWGVLILLA-GSIsalLGVIYALKEHDLKGLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 288 YSSVSHMALVIVAILVQTPWSFMGATALM-----------IAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMA 356
Cdd:PRK08667 300 YSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTS 379
|
330 340 350
....*....|....*....|....*....|
gi 529217162 357 TWWLLASLTNLALPPSINLIGELLVtITSF 386
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASELLL-YESF 408
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
213-405 |
3.11e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 65.71 E-value: 3.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 213 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRismfLDPTTKSMAYPFLMLCLWG---MIMTSSICLRQTDLKSLIAY 288
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 289 SSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLA 368
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 529217162 369 LPPSINLIG-ELLVTITSF--SWSNI-TVILIGLNMLITAL 405
Cdd:PRK12647 370 LPPLFGFLAkELIYEALLEapLWSLIlTVAAVLGNALMVAV 410
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
212-371 |
8.11e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 64.14 E-value: 8.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 212 LHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISM-FLDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK06521 229 LHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYST 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 291 VSHMALVIVAILV--------QTPWSFMGATALM---IAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWW 359
Cdd:PRK06521 309 IENIGIIFVGLGLamvfiaygMPLLAALALTAALyhlLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAF 388
|
170
....*....|..
gi 529217162 360 LLASLTNLALPP 371
Cdd:PRK06521 389 LIGCLAISALPP 400
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
105-387 |
4.16e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 61.48 E-value: 4.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 105 FLIMTFTATELILFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLttnlwlk 184
Cdd:MTH00062 83 FSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFS------- 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 185 eMPNSWSTNLLWLACTMAFM--VKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPFL 262
Cdd:MTH00062 156 -DWGSDDSVSLIVYYVLSFMfiTKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLC 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 263 MLCLWGMIMTSSICLrqtDLKSLIAYSSVSHMaLVIVAILVQTPWSFMGATALM-IAHGLTSSMLFCLANSNYERIHSRT 341
Cdd:MTH00062 235 CLFSVFFLITACSEL---DGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFYEVSGSRN 310
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 529217162 342 MLMARGLQTLLPLMATWWLLASLTNLALPPSINLIGELLVTITSFS 387
Cdd:MTH00062 311 WVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFG 356
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
212-431 |
5.39e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 61.32 E-value: 5.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 212 LHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRISMFLDPTtkSMAYPFLMLC-LWGMIMTSSICLRQTDLKSLIAYS 289
Cdd:COG1009 230 LHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFALS--PVWLTVVAIIgAITALFAALIALAQTDIKRVLAYS 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 290 SVSHMALVIVAILVQtpwSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLAL 369
Cdd:COG1009 307 TVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGI 383
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 529217162 370 PP-----SINLIGELLVTITSFSWSNITVILIGlnMLITALYSLYMLITT----QRGKLTYHLHNLSPSLT 431
Cdd:COG1009 384 PPfagffSKEAILEAALEAGGLGPLLLAVALLG--AFLTAFYSFRLFFLVffgkPRPKTPKHPHESPWLMT 452
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-397 |
6.35e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 60.90 E-value: 6.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 119 YILFEATLIPTLIVITRwGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEMPNSWSTNLLWLA 198
Cdd:PRK12662 136 YVFLEISSISSYVLVAM-GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 199 CTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI--SMF---LDPTTKSMAYPFLMLCLWGMIMTS 273
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvyDVFkanFVFTTLPFNNVFMILAALAIVFGS 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 274 SICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLP 353
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMP 374
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 529217162 354 LMATWWLLASLTNLALPPSINLIGE---LLVTITSFSWSNITVILIG 397
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKwyiLDAFIKSNAWIGLVVLLVG 421
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
38-388 |
1.06e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 60.35 E-value: 1.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 38 GLFLLNYPSDSN--NNFSLSFSSDPLSSPLLMLTMWLLPLMIMASQHHlakepwFRKKSYLSLLITLQMFLIMTFTATEL 115
Cdd:PRK07234 43 GLVASMVPLELTllDNFGVTLRADALSGYFILTNALVTLAVIFYCWES------AKTRFFYAQLLILHGSVNAAFVCADL 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 116 ILFYILFEATLIPTLIVITrWGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLttnlwlkEMPNSWSTNLL 195
Cdd:PRK07234 117 ISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFS-------GLATADPEAFA 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 196 WLActMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPFLMLCLWGmimtSSI 275
Cdd:PRK07234 189 LIA--LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLF 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 276 CLRQTDLKSLIAYSSVSHMALVIVAILVqtpwsfmgATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLm 355
Cdd:PRK07234 263 ALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPL- 333
|
330 340 350
....*....|....*....|....*....|...
gi 529217162 356 atwwLLASLTNLALPPSINLIGELLVTITSFSW 388
Cdd:PRK07234 334 ----TMASFSIAGFPLLAGFVSKVLTLKNLLPW 362
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
212-401 |
1.54e-09 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 59.99 E-value: 1.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 212 LHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRISMFLDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK06525 226 FYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYST 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 291 VSHMALVIVAI---LVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNL 367
Cdd:PRK06525 305 ITQLGYMFFGLslaILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAIT 384
|
170 180 190
....*....|....*....|....*....|....
gi 529217162 368 ALPPSINLIGELLVTITSFSWSNITVILIGLNML 401
Cdd:PRK06525 385 GVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-379 |
2.18e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 59.60 E-value: 2.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 108 MTFTATELILFYILFEATLIPTLIVITRwGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEMP 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 188 nSWSTNLLWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTtKSMAYPFLMLCLW 267
Cdd:PRK12665 205 -SGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPG-GGLDTLLMVVALL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 268 GMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARG 347
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGG 362
|
250 260 270
....*....|....*....|....*....|...
gi 529217162 348 LQTLLPLMATWWLLASLtNLA-LPPSINLIGEL 379
Cdd:PRK12665 363 LAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKV 394
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
213-371 |
3.93e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 58.90 E-value: 3.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 213 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIS-MFLDPTTKSmaypfLMLCLWGM---IMTSSICLRQTDLKSLIAY 288
Cdd:PRK12650 228 HFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSpVFHDVAVWN-----WLLIIVGMitaLMGAVFAVQKTDLKKLTAY 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 289 SSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLA 368
Cdd:PRK12650 303 STVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAA 382
|
...
gi 529217162 369 LPP 371
Cdd:PRK12650 383 VPP 385
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
203-371 |
4.35e-09 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 58.62 E-value: 4.35e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 203 FMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI--SMFLDPTTKSMAYPFLMLCLWGMIMTSSICLRQT 280
Cdd:PRK08377 216 LAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARIlyLMQNANGWSSVLKLVIIMATLTVFFAELSALRQK 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 281 DLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWL 360
Cdd:PRK08377 296 NVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALT 375
|
170
....*....|.
gi 529217162 361 LASLTNLALPP 371
Cdd:PRK08377 376 IGALSTVGIPL 386
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-411 |
1.89e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 56.36 E-value: 1.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 51 NFSLSFSSDPLSSPLLMLTMWLLPLMIMASQHHLAKEPWFRKKSYL---SLLITLQMFLIMTftaTELILFYILFEATLI 127
Cdd:PRK06589 74 NYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLfffNLTILIGVLIALS---SDLFTMFVCYELLTI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 128 PTLIVITrWGNQTERLSAGLYFL-FYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKempnswSTNLLWLACTMAFMVK 206
Cdd:PRK06589 151 STAFLIG-HTRNNISLSGGYKYLkILMISALLLFLPAVILIYTKTGNLDFVSGGLFSK------NQSIILLLMFIYGIAK 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 207 MPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMF---LDPTTK--SMAYPFLMLCLWGMIMTSSICLRQTD 281
Cdd:PRK06589 224 TAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRifAEFNWLIFIPIVSIFYSSLKALKTDN 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 282 LKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLL 361
Cdd:PRK06589 304 IKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISI 383
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 529217162 362 ASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLNMLI--TALYSLYML 411
Cdd:PRK06589 384 SSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVVIasSILSALYLL 435
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-406 |
3.55e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 52.41 E-value: 3.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 56 FSSDPLSSPLLMLTMWLLPLMIMASQHHLAKEPWFRKKSYLSLLITLQMFLIMTftATELILFYILFEATLIPTLIVITR 135
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAI--TGDLFNFFVFLEIMSIASYALVAF 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 136 WGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEMPNSWSTNLLWLACTmAFMVKMPLYGLHLW 215
Cdd:PRK08376 164 RNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALALFIA-GLAMKSGAVPVHMW 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 216 LPKAHVEAPIAGSMVLaaVLLKLGG-YGMMRISMFL-DPTTKSMAYPFLMLCL--WGMIMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK08376 243 LPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIyGPAINLATVGWVIIILgcLTMFVGVAMAVVQKDVKRLLAYHSV 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 292 S---HMAL---VIVAILVQTPWSFMGATAL------MIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWW 359
Cdd:PRK08376 321 SqigYMLLglgVGLAALGDPAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAF 400
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 529217162 360 LLASLTNLALPPSINLIGELLVTITSFSWSNI-TVILIGLNMLITALY 406
Cdd:PRK08376 401 LIGAAAIVGLPPFNGFASKWLIYESSALFNPIlGVIAMIGSVLTLASF 448
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
203-408 |
5.23e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 51.87 E-value: 5.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 203 FMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI-SMFLDPTTKSMAYPFLMLCLWGMIMTSSICLRQTD 281
Cdd:PRK07691 219 FATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFD 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 282 LKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLL 361
Cdd:PRK07691 299 IKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFI 378
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 529217162 362 ASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLNMLITALYSL 408
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSV 425
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
100-419 |
8.32e-06 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 48.21 E-value: 8.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 100 ITLQMF-LIMTFTATELILFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLT 178
Cdd:PRK12646 116 LTLFMFsMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITE 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 179 TNLWLKEMPNS-WSTNLLWLACTMAFmVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRISMFLDpTTKS 256
Cdd:PRK12646 196 ILGQADHIKNHgLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNM 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 257 MAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAI-----LVQTPWSFMGATALMIA---------HGLT 322
Cdd:PRK12646 273 YIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIYVFVLfaalfhlmnHAIF 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 323 SSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALP-----PSINLIGELLVTITSFSWSNITVILIG 397
Cdd:PRK12646 353 KCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPflngfLSKEMFLDALTQTGQLSQFSLISMIII 432
|
330 340
....*....|....*....|....*..
gi 529217162 398 LNM-----LITALYSLYMLITTQRGKL 419
Cdd:PRK12646 433 VFIgviasIFTFTYALYMVKEVFWGKY 459
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
212-327 |
9.14e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 48.38 E-value: 9.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 212 LHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRIS-MFLDptTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYS 289
Cdd:PRK12644 222 FHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLApGFAD--VPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYG 298
|
90 100 110
....*....|....*....|....*....|....*...
gi 529217162 290 SVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12644 299 TVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
196-327 |
1.56e-05 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 47.20 E-value: 1.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 196 WLAcTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRisMFldPTTKSMAYPFLMLCLWGMIMTssi 275
Cdd:PRK12668 187 WLI-LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR--AF--PGTELLIYIGAAMAVYGVFFA--- 258
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 529217162 276 cLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12668 259 -LLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
193-390 |
1.89e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 47.13 E-value: 1.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 193 NLLWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFldpttkSMAYPF---LMLCLWGM 269
Cdd:PRK08042 180 SDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLL------GGNAPLwwgVALLVLGM 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 270 ImTSSI----CLRQTDLKSLIAYSSVSHMALV-------IVAILVQTP----WSFMGATALMIAHGLTSSMLFCLANSNY 334
Cdd:PRK08042 254 I-TAFVgglyALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVW 332
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 529217162 335 ERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPPSINLIGELLVTITSFSWSN 390
Cdd:PRK08042 333 FRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSN 388
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
20-408 |
3.09e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 46.50 E-value: 3.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 20 NSMIWINTTSHSLMISfmglfLLNYPSDSNNNFSLSFSSDPLSSPLLMLTMWLLPLMIMASQHHLAKEPwfRKKSYLSLL 99
Cdd:MTH00208 72 NLLIWILLGCPNINIS-----LSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDP--NKNAFFRLL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 100 ITLQMFLIMTFTATELILFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTT 179
Cdd:MTH00208 145 IIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEI 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 180 NLWLKemPNSWSTNLLWLACTMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAVLLklggygMMRISMFLDP 252
Cdd:MTH00208 225 LSLNN--SNSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLISN 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 253 TTKsmaypFLMLCLW----GMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWsfmgaTAL--MIAHGLTSSML 326
Cdd:MTH00208 296 SPW-----FLSLCLIlgslTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPN-----LALfhICTHAFFKAML 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 327 FCLANSnyeRIHS-------RTMlmaRGLQTLLPLMATWWLLASLTNLALP-----PSINLIGELlvTITSFSwSNITVI 394
Cdd:MTH00208 366 FLCSGS---IIHSlnneqdlRKM---GGLSFLLPVTSSCIILGSLALMGTPflagfYSKDLILEA--GLASIS-NLLSII 436
|
410
....*....|....
gi 529217162 395 LIGLNMLITALYSL 408
Cdd:MTH00208 437 LALIATLLTAVYSF 450
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
191-364 |
3.61e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.86 E-value: 3.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 191 STNLLWLACTMAFMVKMPLYGLHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPFLMLCLWG 268
Cdd:PRK06459 156 PSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAF 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 269 MIMTSSICLRQTD-LKSLIAYSSVSHMALVIVAI--------LVQTPWSFMGATALM--IAHGLTSSMLFC--------- 328
Cdd:PRK06459 236 SILFGALYAYVSEnVKGLLAFSTIENNGAILVALglymvtkqLITSIEHFSLITVILysFAHSVAKTGLFLssglqekqs 315
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 529217162 329 ---LANSNYERIHSRTMLMARGLQTLLPL---MATWWLLASL 364
Cdd:PRK06459 316 itySKKIRNRWIELGLTLLASSLSGLLPNiggVASWLLLESL 357
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
213-323 |
7.87e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 41.73 E-value: 7.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 213 HLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MRISMFLDPTTKSMAYPFLM-LCLWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK05777 224 HMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVAFGGLSEDWQQVLAiIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
90 100 110
....*....|....*....|....*....|...
gi 529217162 291 VSHMALVIVAILVQTPWSFMGATALMIAHGLTS 323
Cdd:PRK05777 303 IAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
37-323 |
1.33e-03 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 40.87 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 37 MGLFLLNYPSDSNNNFSLSFSSDPLSSPLLMLTMWLLPLMIMASQHHLAKEPWFRKKSY-LSLLITL-QMFLIMtftATE 114
Cdd:COG1007 47 LALLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYaLLLFATLgMMLMAS---AND 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 115 LILFYILFEATLIPTLIVITRWGNQTERLSAGL-YFLF---------------YTLVGSLPLLLALTYLQSSMGSLNllt 178
Cdd:COG1007 124 LLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLgalssgfllygisllYGATGSLNLAGIAAALAAGGANSP--- 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 179 tnlwlkempnswstnLLWLACTM---AFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MRI-SMFLDPT 253
Cdd:COG1007 201 ---------------LLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLlVEAFPGL 264
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 254 TKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTS 323
Cdd:COG1007 265 AADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMN 334
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-370 |
1.51e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 41.10 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 59 DPLSSPLLMLTMWLLPLMIMASQHHLAKEPWF-RKKSYLSLLITLQMFLImtfTATELILFYILFEATLIPTLIVITRWG 137
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVpRFLCYLSLFTFLMMVLV---TSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 138 NQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTT---NLWLKEMPNSWSTNLLWLACTMAFMV--------- 205
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggSVGSGIMDRGYYGGGAYESPLAPFAIigillligc 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 206 --KMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISmfldPTTKSMAYPFLMLCLWGMI---MTSSICLRQT 280
Cdd:MTH00032 236 igKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 281 DLKSLIAYSSVSHMALVIVAILVQTpwSFMGATALMIAHGLTSSMLFCLANSnyeRIHSRT-----MLMARGLQTLLPLM 355
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGS---VIHSTTvdeqdMRKMGGLIHSIPFT 386
|
330
....*....|....*
gi 529217162 356 ATWWLLASLTNLALP 370
Cdd:MTH00032 387 YTMMLIGSFSIMGLP 401
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
52-381 |
1.99e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 40.32 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 52 FSLSFSSDPLSSpLLMLTMWLLPLMIMAsqHHLAK-EPWFRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTL 130
Cdd:PRK12663 69 FGIQFTGDSLSA-LMVTTASFVATAIMA--YGFGDiEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 131 IVITrWGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEMPNSWSTNLLWLACTMAFMVKMPLY 210
Cdd:PRK12663 146 VLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 211 GLHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDPTTKSMAYPFL--MLCLwGMIMTSSICLRQTDLKSLIAY 288
Cdd:PRK12663 225 PFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLatMAAI-TMVIGALGALAYKDIRRIAGY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 289 SSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLA 368
Cdd:PRK12663 303 QVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGG 382
|
330
....*....|...
gi 529217162 369 LPPSINLIGELLV 381
Cdd:PRK12663 383 LPPFSGFWGKVLL 395
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
170-409 |
2.45e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 39.87 E-value: 2.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 170 SMGSLNLLTTNLWLKEMPNSWSTNLLWLactMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMMriSMF 249
Cdd:MTH00144 64 SLGSSLLIFGSLIMYNLSFSWFSMSLLL---LGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLL--SNF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 250 LDptTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVqTPWSFMgaTALMIAHGLTSSMLFCL 329
Cdd:MTH00144 138 LD--LYWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILH-GSWLMW--MYFLIYIVSSGFLFFSL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 330 ANSNyerihsrTMLMARGLQTLLPLMATWWLLASLTNLA-LPPSINLIGELLVTITSFSWSNITVILIglnMLITALYSL 408
Cdd:MTH00144 213 WSGD-------SGSMKDLGSLKPSYKTGLSIISLLLSLGgLPPFLGFCSKLLVLISSMESSPLLLILL---LLLGSLISL 282
|
.
gi 529217162 409 Y 409
Cdd:MTH00144 283 F 283
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
262-371 |
2.99e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 40.01 E-value: 2.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 262 LMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRT 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110
....*....|....*....|....*....|
gi 529217162 342 MLMARGLQTLLPLMATWWLLASLTNLALPP 371
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
211-408 |
4.67e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 39.29 E-value: 4.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 211 GLHLWLPKAH-----VEAPI-AGSMVLAAVLLklggygMMRISMFLDpttksmaYPFLMLCLWGMI------MTSSICLR 278
Cdd:MTH00020 228 GLHTWLPDAMegptpVSALIhAATMVTAGVFL------LIRSSPLFE-------QAPLALIIVTIVgsltvfFAATVGLV 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 279 QTDLKSLIAYSSVSHMALVIVAILVQtpwSFMGATALMIAHGLTSSMLFCLANSnyeRIHS----RTMLMARGLQTLLPL 354
Cdd:MTH00020 295 QNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFHLMNHAFFKALLFLSAGS---VIHAlsdeQDMRKMGGLISFLPL 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 529217162 355 MATWWLLASLTNLALP-----PSINLIGELLVTITSFSWSnitVILIGLNMLITALYSL 408
Cdd:MTH00020 369 TYIFFLIGSLSLMGFPyltgfYSKDLILELAFGQYYLIFA---YWLGCFSALLTAFYSI 424
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
95-371 |
8.49e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 38.66 E-value: 8.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 95 YLSLLITLQMFLIMTFTATELILFyILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGS- 173
Cdd:PRK12649 114 YQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTy 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 174 -----LNLLTTNLWLKEMPNSWSTNLLWLACTMAFMVKMPLYglhLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRIS 247
Cdd:PRK12649 193 diatiLQDSELIENIKGHPLFLITLILIFIGAAAKSAQGPFY---IWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIH 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217162 248 MFLDPTTKSmaypFLMLCLWGMI---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILVQTP----WSFMGATALMIAHG 320
Cdd:PRK12649 269 PIFSGTEAW----FILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHA 344
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 529217162 321 LTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPP 371
Cdd:PRK12649 345 TFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| |
