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Conserved domains on  [gi|529217265|ref|YP_008378982|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Eulemur rufus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 558.09  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265   1 MFMLNLLLLIVPILLAMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALT 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  81 IALVMWIPLPLPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 161 TLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 529217265 241 LFLGALYNLHTPETYTTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLTSCIPPQM 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 558.09  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265   1 MFMLNLLLLIVPILLAMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALT 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  81 IALVMWIPLPLPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 161 TLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 529217265 241 LFLGALYNLHTPETYTTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLTSCIPPQM 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
NADHdh pfam00146
NADH dehydrogenase;
16-305 2.34e-112

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 327.51  E-value: 2.34e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265   16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMW--IPLPLPY 93
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFavIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265   94 PLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLW 173
Cdd:pfam00146  92 VLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  174 LIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAlYNLHTPE 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGG-WLGPFPL 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 529217265  254 TYTTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYV 305
Cdd:pfam00146 251 PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-299 1.82e-99

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 295.89  E-value: 1.82e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPL--PY 93
Cdd:COG1005   25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpGL 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  94 PLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQE-YL 172
Cdd:COG1005  105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgGL 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 173 WLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAlYNLHTP 252
Cdd:COG1005  185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGG-WLGPFP 263

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 529217265 253 ETYTTS------FATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005  264 ILPLGGlpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 558.09  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265   1 MFMLNLLLLIVPILLAMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALT 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  81 IALVMWIPLPLPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 161 TLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 529217265 241 LFLGALYNLHTPETYTTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLTSCIPPQM 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 16-318 2.70e-178

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 495.57  E-value: 2.70e-178
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPL 95
Cdd:MTH00111  21 AVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFPL 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:MTH00111 101 ADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWLI 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHTPETY 255
Cdd:MTH00111 181 FSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLNLPPELF 260

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 529217265 256 TTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLTSCIPPQM 318
Cdd:MTH00111 261 TINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 16-317 2.74e-172

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 480.27  E-value: 2.74e-172
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPL 95
Cdd:MTH00071  21 AVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNNL 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:MTH00071 101 SNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWLI 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHTPETY 255
Cdd:MTH00071 181 IPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQPELS 260

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 529217265 256 TTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLTSCIPPQ 317
Cdd:MTH00071 261 TMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 16-318 8.74e-169

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 471.40  E-value: 8.74e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPL 95
Cdd:MTH00134  22 AVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYPV 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:MTH00134 102 TDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLL 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHTPETY 255
Cdd:MTH00134 182 LPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLPELT 261

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 529217265 256 TTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLTSCIPPQM 318
Cdd:MTH00134 262 TINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 16-316 2.79e-140

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 398.90  E-value: 2.79e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPL 95
Cdd:MTH00218  18 AVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFSL 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:MTH00218  98 INLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWLL 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNlhtpety 255
Cdd:MTH00218 178 IPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLT------- 250

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 529217265 256 TTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLTSCIPP 316
Cdd:MTH00218 251 TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 16-316 4.90e-134

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 383.56  E-value: 4.90e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPL 95
Cdd:MTH00040  20 AVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVPTPT 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:MTH00040 100 LNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGSWLL 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAlyNLHTPETY 255
Cdd:MTH00040 180 FPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGG--GSPFNEIF 257

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 529217265 256 ---TTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLTSCIPP 316
Cdd:MTH00040 258 pinIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 16-312 3.80e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 332.48  E-value: 3.80e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPL 95
Cdd:MTH00195  18 AVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFGF 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:MTH00195  98 SSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWVI 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAlynlhtpeTY 255
Cdd:MTH00195 178 LLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGG--------GG 249

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 529217265 256 TTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLTS 312
Cdd:MTH00195 250 TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALN 306
NADHdh pfam00146
NADH dehydrogenase;
16-305 2.34e-112

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 327.51  E-value: 2.34e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265   16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMW--IPLPLPY 93
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFavIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265   94 PLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLW 173
Cdd:pfam00146  92 VLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  174 LIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAlYNLHTPE 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGG-WLGPFPL 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 529217265  254 TYTTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYV 305
Cdd:pfam00146 251 PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 18-310 2.01e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 322.87  E-value: 2.01e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  18 AFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPLIN 97
Cdd:MTH00193  20 AFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFNLIS 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  98 MNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLIIP 177
Cdd:MTH00193 100 FNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWFIFF 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 178 SWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYnlhtpetYTT 257
Cdd:MTH00193 180 SFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDL-------LSL 252

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 529217265 258 SFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVL 310
Cdd:MTH00193 253 LFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIF 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 16-307 5.00e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 319.12  E-value: 5.00e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPL 95
Cdd:MTH00143  17 AVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFSS 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:MTH00143  97 SYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWLG 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHTpeTY 255
Cdd:MTH00143 177 FLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSVLFL--LG 254

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 529217265 256 TTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSL 307
Cdd:MTH00143 255 GVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-307 8.19e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 303.49  E-value: 8.19e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265   1 MFMLNLLLLIVPILLAMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALT 80
Cdd:MTH00225   2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  81 IALVMWIPLPLPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSF 160
Cdd:MTH00225  82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 161 TLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00225 162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 529217265 241 LFLGALYNlhtpeTYTTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSL 307
Cdd:MTH00225 242 LFFGGFFV-----TIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 16-316 4.27e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 302.42  E-value: 4.27e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMW--IPLPLPY 93
Cdd:MTH00054  18 SIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWgvIPYGEGV 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  94 PLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLW 173
Cdd:MTH00054  98 VLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNIW 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 174 LIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHTPE 253
Cdd:MTH00054 178 FIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVISGPT 257

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 529217265 254 TYTTS---FATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLTSCIPP 316
Cdd:MTH00054 258 SYFSNfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 16-307 4.58e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 297.42  E-value: 4.58e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPL 95
Cdd:MTH00216  22 AVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYERGV 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  96 I--NMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQ-EYL 172
Cdd:MTH00216 102 LisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQnNGI 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 173 WLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNlhtP 252
Cdd:MTH00216 182 WFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGWLS---P 258

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 529217265 253 ETYTTS----FATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSL 307
Cdd:MTH00216 259 IKYFKGgagwFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-299 1.82e-99

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 295.89  E-value: 1.82e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPL--PY 93
Cdd:COG1005   25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpGL 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  94 PLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQE-YL 172
Cdd:COG1005  105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgGL 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 173 WLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAlYNLHTP 252
Cdd:COG1005  185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGG-WLGPFP 263

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 529217265 253 ETYTTS------FATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005  264 ILPLGGlpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
18-303 1.02e-97

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 290.94  E-value: 1.02e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  18 AFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPL--PYPL 95
Cdd:PRK06076  28 AFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFgpELVI 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:PRK06076 108 ADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWNI 187

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLG---ALYNLHTP 252
Cdd:PRK06076 188 IPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGgwlPPFPLGGG 267

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 529217265 253 ETYTTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMW 303
Cdd:PRK06076 268 IPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 16-310 9.86e-87

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 262.79  E-value: 9.86e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPL 95
Cdd:MTH00010  19 AMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPS 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQeYLWLI 175
Cdd:MTH00010  99 FFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQ-YSWIL 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHTPEty 255
Cdd:MTH00010 178 LMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSFIPSIFISD-- 255

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 529217265 256 tTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVL 310
Cdd:MTH00010 256 -LMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFL 309
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 16-316 3.36e-83

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 254.94  E-value: 3.36e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMW--IPLPLPY 93
Cdd:MTH00029  23 SVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWaiVTMDQGV 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  94 PLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLW 173
Cdd:MTH00029 103 FLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSVW 182

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 174 LIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGA-LYNLHTP 252
Cdd:MTH00029 183 LIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGwLSPLDGI 262

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 529217265 253 ETYTTSFATKTLLLTTLFL---------------WVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLTSCIPP 316
Cdd:MTH00029 263 PTPPEAFSIFEQIASSKSSfwfftkssifilffiWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGFNGVPP 341
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 16-307 5.80e-60

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 193.19  E-value: 5.80e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  16 AMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPL 95
Cdd:MTH00090  12 AIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDF 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLStlitTQEYLWLI 175
Cdd:MTH00090  92 LSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFV----SSFSLSLF 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 176 IpswpLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYnlhtpety 255
Cdd:MTH00090 168 V----IYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFSF-------- 235

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 529217265 256 ttsfaTKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSL 307
Cdd:MTH00090 236 -----LMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVL 282
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 18-298 4.89e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 162.79  E-value: 4.89e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  18 AFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPLIN 97
Cdd:MTH00058  19 AFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGSY 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  98 MNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLIIP 177
Cdd:MTH00058  99 SSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLSVLLFP 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 178 swPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAlynlhtpetytT 257
Cdd:MTH00058 179 --LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGG-----------G 245

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 529217265 258 SFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:MTH00058 246 FVSIMLLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 24-298 2.19e-42

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 149.72  E-value: 2.19e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  24 ERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPLI--NMNMG 101
Cdd:CHL00032  51 EREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVlaDLSIG 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 102 LLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQ-EYLWLIIPSW- 179
Cdd:CHL00032 131 VFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQsKYGFWGWNLWr 210

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 180 -PLA-MMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAlYNLHTPETYTT 257
Cdd:CHL00032 211 qPIGfIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG-WNLSIPYIFIP 289

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 258 SFATKTLLLTTLFLWV-------------------RASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:CHL00032 290 ELFEINKTGGVFGTTIgifitlaktylflfisittRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
25-305 3.85e-27

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 107.96  E-value: 3.85e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265  25 RKILGYMQLRKGPnvvgphGMIQPFADAMKLFIKEPLRPlTSSSSLYTIAPTLAL--TIALVMWIPLPLPYPLINMNMGL 102
Cdd:COG0650   26 RKVKARLQGRRGP------PILQPYYDLLKLLRKETVVP-ETASWLFRAAPYVALaaMLLAALLVPVLTTGPPLSFSGDL 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 103 LFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQE---YLWLIIPSW 179
Cdd:COG0650   99 IVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAahgPLLLSPSLL 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217265 180 PLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLhTPETYTTSF 259
Cdd:COG0650  179 LAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLPWGIAL-TLLLALLLF 257

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 529217265 260 ATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYV 305
Cdd:COG0650  258 LLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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