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Conserved domains on  [gi|529217419|ref|YP_008379125|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Prolemur simus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-317 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 574.65  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419   1 MFMINLLLLIIPIMLAMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALT 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  81 IALVMWIPLPIPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 161 TLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 529217419 241 LFLGALYNLHMPETYTTGFAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLASCIPPQ 317
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQ 317
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 574.65  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419   1 MFMINLLLLIIPIMLAMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALT 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  81 IALVMWIPLPIPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 161 TLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 529217419 241 LFLGALYNLHMPETYTTGFAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLASCIPPQ 317
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQ 317
NADHdh pfam00146
NADH dehydrogenase;
16-305 2.64e-116

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 337.52  E-value: 2.64e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419   16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMW--IPLPIPY 93
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFavIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419   94 PLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLW 173
Cdd:pfam00146  92 VLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  174 LIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAlYNLHMPE 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGG-WLGPFPL 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 529217419  254 TYTTGFAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYV 305
Cdd:pfam00146 251 PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-299 1.98e-105

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 310.91  E-value: 1.98e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPI--PY 93
Cdd:COG1005   25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpGL 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  94 PLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQE-YL 172
Cdd:COG1005  105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgGL 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 173 WLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAlYNLHMP 252
Cdd:COG1005  185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGG-WLGPFP 263

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 529217419 253 ETYTTG------FAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005  264 ILPLGGlpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 574.65  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419   1 MFMINLLLLIIPIMLAMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALT 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  81 IALVMWIPLPIPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 161 TLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 529217419 241 LFLGALYNLHMPETYTTGFAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLASCIPPQ 317
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQ 317
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 16-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 514.06  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPIPYPL 95
Cdd:MTH00111  21 AVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFPL 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:MTH00111 101 ADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWLI 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHMPETY 255
Cdd:MTH00111 181 FSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLNLPPELF 260

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 529217419 256 TTGFAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLASCIPPQ 317
Cdd:MTH00111 261 TINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQ 322
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 16-317 1.22e-177

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 493.75  E-value: 1.22e-177
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPIPYPL 95
Cdd:MTH00071  21 AVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNNL 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:MTH00071 101 SNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWLI 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHMPETY 255
Cdd:MTH00071 181 IPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQPELS 260

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 529217419 256 TTGFAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLASCIPPQ 317
Cdd:MTH00071 261 TMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 16-317 9.69e-175

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 486.42  E-value: 9.69e-175
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPIPYPL 95
Cdd:MTH00134  22 AVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYPV 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:MTH00134 102 TDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLL 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHMPETY 255
Cdd:MTH00134 182 LPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLPELT 261

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 529217419 256 TTGFAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLASCIPPQ 317
Cdd:MTH00134 262 TINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQ 323
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 16-316 3.13e-143

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 406.22  E-value: 3.13e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPIPYPL 95
Cdd:MTH00218  18 AVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFSL 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:MTH00218  98 INLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWLL 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNlhmpety 255
Cdd:MTH00218 178 IPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLT------- 250

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 529217419 256 TTGFAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLASCIPP 316
Cdd:MTH00218 251 TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 16-316 3.15e-140

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 398.97  E-value: 3.15e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPIPYPL 95
Cdd:MTH00040  20 AVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVPTPT 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:MTH00040 100 LNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGSWLL 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAlyNLHMPETY 255
Cdd:MTH00040 180 FPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGG--GSPFNEIF 257

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 529217419 256 TTG---FAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLASCIPP 316
Cdd:MTH00040 258 PINiiiVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 16-310 2.92e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 340.18  E-value: 2.92e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPIPYPL 95
Cdd:MTH00195  18 AVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFGF 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:MTH00195  98 SSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWVI 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAlynlhmpeTY 255
Cdd:MTH00195 178 LLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGG--------GG 249

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 529217419 256 TTGFAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVL 310
Cdd:MTH00195 250 TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFA 304
NADHdh pfam00146
NADH dehydrogenase;
16-305 2.64e-116

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 337.52  E-value: 2.64e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419   16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMW--IPLPIPY 93
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFavIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419   94 PLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLW 173
Cdd:pfam00146  92 VLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  174 LIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAlYNLHMPE 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGG-WLGPFPL 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 529217419  254 TYTTGFAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYV 305
Cdd:pfam00146 251 PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 18-310 5.31e-115

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 334.43  E-value: 5.31e-115
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  18 AFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPIPYPLIN 97
Cdd:MTH00193  20 AFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFNLIS 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  98 MNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLIIP 177
Cdd:MTH00193 100 FNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWFIFF 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 178 SWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHMpetytt 257
Cdd:MTH00193 180 SFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLL------ 253

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 529217419 258 gFAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVL 310
Cdd:MTH00193 254 -FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIF 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 16-307 9.04e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 331.45  E-value: 9.04e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPIPYPL 95
Cdd:MTH00143  17 AVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFSS 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:MTH00143  97 SYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWLG 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHMpeTY 255
Cdd:MTH00143 177 FLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSVLFL--LG 254

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 529217419 256 TTGFAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSL 307
Cdd:MTH00143 255 GVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 16-307 1.28e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 315.82  E-value: 1.28e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPIPYPL 95
Cdd:MTH00225  17 SVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPSMFSI 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:MTH00225  97 YSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQKYFWFM 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNlhmpeTY 255
Cdd:MTH00225 177 FVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGFFV-----TI 251

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 529217419 256 TTGFAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSL 307
Cdd:MTH00225 252 DLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-299 1.98e-105

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 310.91  E-value: 1.98e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPI--PY 93
Cdd:COG1005   25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpGL 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  94 PLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQE-YL 172
Cdd:COG1005  105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgGL 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 173 WLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAlYNLHMP 252
Cdd:COG1005  185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGG-WLGPFP 263

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 529217419 253 ETYTTG------FAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005  264 ILPLGGlpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 16-316 9.46e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 308.97  E-value: 9.46e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMW--IPLPIPY 93
Cdd:MTH00054  18 SIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWgvIPYGEGV 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  94 PLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLW 173
Cdd:MTH00054  98 VLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNIW 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 174 LIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHMPE 253
Cdd:MTH00054 178 FIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVISGPT 257

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 529217419 254 TYTTG---FAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLASCIPP 316
Cdd:MTH00054 258 SYFSNfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 16-307 6.38e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 304.74  E-value: 6.38e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMW--IPLPIPY 93
Cdd:MTH00216  22 AVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWgvIPYERGV 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  94 PLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQ-EYL 172
Cdd:MTH00216 102 LISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQnNGI 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 173 WLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNlhmP 252
Cdd:MTH00216 182 WFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGWLS---P 258

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 529217419 253 ETYTTG----FAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSL 307
Cdd:MTH00216 259 IKYFKGgagwFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
18-303 9.29e-102

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 301.34  E-value: 9.29e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  18 AFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPI--PYPL 95
Cdd:PRK06076  28 AFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFgpELVI 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLI 175
Cdd:PRK06076 108 ADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWNI 187

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHMPETY 255
Cdd:PRK06076 188 IPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLPPFPLGGG 267

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 529217419 256 TTG---FAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMW 303
Cdd:PRK06076 268 IPGaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 16-310 4.15e-91

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 273.97  E-value: 4.15e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPIPYPL 95
Cdd:MTH00010  19 AMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPS 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQeYLWLI 175
Cdd:MTH00010  99 FFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQ-YSWIL 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHMPETY 255
Cdd:MTH00010 178 LMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSFIPSIFISDLM 257

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 529217419 256 TTGfaiKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVL 310
Cdd:MTH00010 258 LIL---KTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFL 309
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 16-316 7.53e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 256.48  E-value: 7.53e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMW--IPLPIPY 93
Cdd:MTH00029  23 SVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWaiVTMDQGV 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  94 PLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLW 173
Cdd:MTH00029 103 FLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSVW 182

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 174 LIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYN----- 248
Cdd:MTH00029 183 LIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGWLSpldgi 262

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 529217419 249 LHMPETYTTG-----------FAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLASCIPP 316
Cdd:MTH00029 263 PTPPEAFSIFeqiasskssfwFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGFNGVPP 341
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 16-307 6.54e-62

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 198.20  E-value: 6.54e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  16 AMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPIPYPL 95
Cdd:MTH00090  12 AIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDF 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  96 INMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLStlitTQEYLWLI 175
Cdd:MTH00090  92 LSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFV----SSFSLSLF 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 176 IpswpLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYnlhmpety 255
Cdd:MTH00090 168 V----IYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFSF-------- 235

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 529217419 256 ttgfaIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSL 307
Cdd:MTH00090 236 -----LMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVL 282
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 18-298 1.73e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 166.64  E-value: 1.73e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  18 AFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPIPYPLIN 97
Cdd:MTH00058  19 AFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGSY 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  98 MNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLIIP 177
Cdd:MTH00058  99 SSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLSVLLFP 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 178 swPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGalynlhmpetytt 257
Cdd:MTH00058 179 --LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFG------------- 243

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 529217419 258 GFAIKTLLLTTI--FLWVRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:MTH00058 244 GGFVSIMLLFHLlfFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 24-298 1.42e-45

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 158.19  E-value: 1.42e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  24 ERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPIPYPLI--NMNMG 101
Cdd:CHL00032  51 EREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVlaDLSIG 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 102 LLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQ-EYLWLIIPSW- 179
Cdd:CHL00032 131 VFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQsKYGFWGWNLWr 210

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 180 -PLA-MMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAlYNLHMPETY-- 255
Cdd:CHL00032 211 qPIGfIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG-WNLSIPYIFip 289

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 529217419 256 --------------TTGFAIkTLLLTTIFLWV----RASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:CHL00032 290 elfeinktggvfgtTIGIFI-TLAKTYLFLFIsittRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
19-305 2.88e-31

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 118.75  E-value: 2.88e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  19 FLTLVERKILGYMQLRKGPnvvgphGMIQPFADAMKLFIKEPLRPlTSSSSLYTIAPTLAL--TIALVMWIPLPIPYPLI 96
Cdd:COG0650   20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVP-ETASWLFRAAPYVALaaMLLAALLVPVLTTGPPL 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419  97 NMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQE---YLW 173
Cdd:COG0650   93 SFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAahgPLL 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217419 174 LIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHMPE 253
Cdd:COG0650  173 LSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLPWGIALTLLL 252

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 529217419 254 TYTTgFAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYV 305
Cdd:COG0650  253 ALLL-FLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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