|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-560 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 684.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 1 MCSLSFFFLFLFSTLIFLLGIYYLMFDYSVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNES 80
Cdd:MTH00165 3 MCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 81 NINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVSILISIAWMLNFG 160
Cdd:MTH00165 83 NINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 161 SWNYVNYYYFILDSFEMSIITILINLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNY 240
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 241 GWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDS 320
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 321 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEIVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMG 400
Cdd:MTH00165 323 QDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 401 DNNFYPSYFFDDNSYFISFGMIGLLFVAVFGGSFLSWLIFPIPYMIVLPWYLKFLTMFVVILGCYLGYLISDFDYFYGLF 480
Cdd:MTH00165 403 DFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLK 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 481 SLSFLSFVSFVGSMWFMPFLSTNYISYLPLKFGYELSKSFDYGWGELLGGQGLYSFFLYVINYIQSLYDSNFKVYLLTFI 560
Cdd:MTH00165 483 SLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFL 562
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
20-560 |
2.73e-169 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 492.44 E-value: 2.73e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 20 GIYYLMFDYSVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLL 99
Cdd:MTH00151 22 LGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 100 IISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVSILISIAWMLNFGSWNYvnyyYFILDSFEMSI 179
Cdd:MTH00151 102 IFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSI----LSMWDFKLSGW 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 180 ITILINLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LINNYGWFLLLIGCMTMFMAGLG 258
Cdd:MTH00151 178 LGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLsSSSGFSSFLLFISLLTLLMAGIS 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 259 ANFEFDLKKIIALSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSV 338
Cdd:MTH00151 258 ACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLTSG 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 339 CFNVSSLSLCGMPFLAGFYSKDLILEIVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNFYPSYFFDDNSYFIS 418
Cdd:MTH00151 338 CLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFYVS 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 419 FGMIGLLFVAVFGGSFLSWLIFPIPYMIVLPWYLKFLTMFVVILGCYLGYLISDFDYFYGLFSLSflsfVSFVGSMWFMP 498
Cdd:MTH00151 418 LPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKL----SFFFSSMWFLS 493
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 584593735 499 FLSTNYISYLPLKFGYELSKSFDYGWGELLGGQGLYSFFLYVINYIQSLYDSNFKVYLLTFI 560
Cdd:MTH00151 494 PLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLIL 555
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
21-560 |
1.91e-168 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 490.31 E-value: 1.91e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 21 IYYLMFDYSVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLI 100
Cdd:MTH00209 21 VIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 101 ISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVSILISIAWMLNFGSWNYvnyYYFILDSFEMSII 180
Cdd:MTH00209 101 FVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWNI---FYLNFNSNLGSVI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 181 TILINLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LINNYGWFLLLIGCMTMFMAGLGA 259
Cdd:MTH00209 178 SVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLfSSPFFSMSLLLLGSLTTLMASMSA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 260 NFEFDLKKIIALSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVC 339
Cdd:MTH00209 258 NVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSIC 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 340 FNVSSLSLCGMPFLAGFYSKDLILEIVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNFYPSYFFDDNSYFISF 419
Cdd:MTH00209 338 LNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLK 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 420 GMIGLLFVAVFGGSFLSWLIFPIPYMIVLPWYLKFLTMFVVILGCYLGYLISDfdyfYGLFSLSFLSFVSFVGSMWFMPF 499
Cdd:MTH00209 418 PMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLK----KNFFLIKGYKVNYFLSQMWFLPD 493
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 584593735 500 LSTNYISYLPLKFGYELSKSFDYGWGELLGGQGLYSFFLYVINYIQSLYDSNFKVYLLTFI 560
Cdd:MTH00209 494 LSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMM 554
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
21-557 |
2.40e-165 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 482.34 E-value: 2.40e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 21 IYYLMFDYSVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLI 100
Cdd:MTH00207 26 LYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLI 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 101 ISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVSILISIAWMLNFGSWNYVNYYyfilDSFEMSII 180
Cdd:MTH00207 106 FFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSITNMW----QTDMNNYI 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 181 TILINLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLliNNYGWF---LLLIGCMTMFMAGL 257
Cdd:MTH00207 182 ALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFL--SSTYWFnpaLLLTASLTMLMAGL 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 258 GANFEFDLKKIIALSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTS 337
Cdd:MTH00207 260 SAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTT 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 338 VCFNVSSLSLCGMPFLAGFYSKDLILEIVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNFYPSYFFDDNSYFI 417
Cdd:MTH00207 340 SCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDKSL 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 418 SFGMIGLLFVAVFGGSFLSWLIFPIPYMIVLPWYLKFLTMFVVILGCYLGYLISDFDYFYGLFSLSFLSFVSFVGSMWFM 497
Cdd:MTH00207 420 TTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPLSHFASCLMWFL 499
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 498 PFLSTNYISYLPLKFGYELSKSFDYGWGELLGGQGLYSFFLYVINYIQSLYDSNFKVYLL 557
Cdd:MTH00207 500 VPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLM 559
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
29-573 |
9.10e-122 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 371.59 E-value: 9.10e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 29 SVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISI 108
Cdd:MTH00211 56 TILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 109 LLGWDGLGLVSYCLVIYYQNVKSYNAGMLTAL-SNRIGDVSILISIAWML-NFGSWNYVNYYYFildSFEMSIITILINL 186
Cdd:MTH00211 136 FIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlNLNSWEISQLFIL---NLDLTLFLLGLLL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 187 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNY-GWFLLLIGCMTMFMAGLGANFEFDL 265
Cdd:MTH00211 213 AAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLiLGAVLLLGALTMLFGALCALTQNDI 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 266 KKIIALSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSL 345
Cdd:MTH00211 293 KKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSL 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 346 SLCGMPFLAGFYSKDLILEIVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNFYPSYFFDDNSYFISFGMIGLL 425
Cdd:MTH00211 373 ALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLA 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 426 FVAVFGGSFLSWLIFPIPYMIV-LPWYLKFLTMFVVILGCYLGylisdFDYFYGLFSLSFLSFVSFVGSMWFMPFLSTNY 504
Cdd:MTH00211 453 LGSILAGFIITSNLPPEKPEILsLPFLLKLMPLLVTIVGLLLG-----LELVNLTHKQLKTSTLSFSNMLGYYPPIIHRL 527
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 505 ISYLPLKFGYELS-KSFDYGWGELLGGQGLYSFFLYVINYIQSLYDSNFKVYLLTFIFWMFILFMFFFIY 573
Cdd:MTH00211 528 LPKLSLKWGQTLStHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLFLLF 597
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
29-467 |
8.34e-102 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 320.19 E-value: 8.34e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 29 SVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISI 108
Cdd:MTH00004 61 SITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 109 LLGWDGLGLVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVSILISIAWM-LNFGSWNYVNyyyfILDSFEMSIITIL-IN 185
Cdd:MTH00004 141 FIGWEGVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWEIQQ----LFSPTQTPTLPLLgLI 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 186 LAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNYGWFL-LLIGCMTMFMAGLGANFEFD 264
Cdd:MTH00004 217 LAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTIcLCLGALTTLFAATCALTQND 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 265 LKKIIALSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:MTH00004 297 IKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGN 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 345 LSLCGMPFLAGFYSKDLILEIVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNFYPSYFFDDNSYFISFGMIGL 424
Cdd:MTH00004 377 LALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRL 456
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 584593735 425 LFVAVFGGSFLSWLIFPI-PYMIVLPWYLKFLTMFVVILGCYLG 467
Cdd:MTH00004 457 ALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLA 500
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
29-560 |
2.59e-99 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 313.38 E-value: 2.59e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 29 SVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISI 108
Cdd:MTH00066 59 SITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 109 LLGWDGLGLVSYCLV-IYYQNVKSYNAGMLTALSNRIGDVSILISIAW-MLNFGSWNYvnYYYFILDSFEMSIITILInL 186
Cdd:MTH00066 139 FIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWEL--QQIFLLNDNSTLPLLGLI-L 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 187 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNYGWFL-LLIGCMTMFMAGLGANFEFDL 265
Cdd:MTH00066 216 AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTIcLCLGALTTLFTAACALTQNDI 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 266 KKIIALSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSL 345
Cdd:MTH00066 296 KKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSL 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 346 SLCGMPFLAGFYSKDLILEIVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNFYPSYFFDDNSYFISFGMIGLL 425
Cdd:MTH00066 376 ALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLA 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 426 FVAVFGGSFLSWLIFPIPYMIV-LPWYLKFLTMFVVILGCYLGYLISDFDYFYGLFSLSFlsfvSFVGSMWFMPFLSTNY 504
Cdd:MTH00066 456 WGSIIAGLLIIFNILPMKPQILtMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKMH----SFSNLLAFFPTIIHRL 531
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 584593735 505 ISYLPLKFGYELSKS-FDYGWGELLGGQGLYSFFLYVINYIQSLYDSNFKVYLLTFI 560
Cdd:MTH00066 532 SPKTNLNSGQNIATHlTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFL 588
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
37-560 |
3.77e-99 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 313.83 E-value: 3.77e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 37 FSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLG 116
Cdd:MTH00208 92 LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVG 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 117 LVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVSILISIAW-MLNFGSWNYVNYYYFI-LDSFEMSIITILINLAAMTKSA 193
Cdd:MTH00208 172 FLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLINFNSWNLNEILSLNnSNSFLINILLFGILLAAAGKSA 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 194 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmlLINNYGWFL---LLIGCMTMFMAGLGANFEFDLKKIIA 270
Cdd:MTH00208 252 QFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSP--LISNSPWFLslcLILGSLTALFAASTAISQHDIKKIIA 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 271 LSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGM 350
Cdd:MTH00208 330 YSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGT 409
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 351 PFLAGFYSKDLILEIVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNFYPSYFFDDNSYFISFGMIGLLFVAVF 430
Cdd:MTH00208 410 PFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTII 489
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 431 GGSFLSWLIFPIPyMIVLPWYLKFLTMFVVILGCYLGYLISdfdYFYGLFSLSFLSFvSFVGSMWFMPFLSTNYISYLPL 510
Cdd:MTH00208 490 SGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSFSFL---LSLSSNPINSNFF-SFLSNQWFFVNISHSIIISFSF 564
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 584593735 511 KFGYELS-KSFDYGWGELLGGQGLYSFFLYVINYIQSLYDSNFKVYLLTFI 560
Cdd:MTH00208 565 FTSLFGStRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSST 615
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
34-470 |
5.50e-99 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 312.86 E-value: 5.50e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 34 WELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWD 113
Cdd:COG1009 62 YTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 114 GLGLVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVSILISIAWMLN-FGSWNY---VNYYYFILDSFEMSIITILINLAA 188
Cdd:COG1009 142 LVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTLNFselLAAAPTILSSPLLTLILLLLLLGA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 189 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LINNYGWFLLLIGCMTMFMAGLGANFEFDLKK 267
Cdd:COG1009 222 FGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFaLSPVWLTVVAIIGAITALFAALIALAQTDIKR 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 268 IIALSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLkDSQDIRFMGSIVNFMPLTSVCFNVSSLSL 347
Cdd:COG1009 302 VLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSL 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 348 CGMPFLAGFYSKDLILE-IVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNFYPSYFFDDNSYFISFGMIGLLF 426
Cdd:COG1009 381 AGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAV 460
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 584593735 427 VAVFGGSFLSWL---------IFPIPYMIVLPWYLKFLTMFVVILGCYLGYLI 470
Cdd:COG1009 461 LSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
24-466 |
5.23e-95 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 302.16 E-value: 5.23e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 24 LMFDYS----VFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLL 99
Cdd:MTH00108 52 MMFIHSgqemIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLIL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 100 IISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVSILISIAW-MLNFGSWNYVNYyyFILDSFEM 177
Cdd:MTH00108 132 VTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLNLNSWDLQQI--FMLNPNNS 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 178 SIITILINLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNYGWFLLL-IGCMTMFMAG 256
Cdd:MTH00108 210 NLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLcLGAITTLFTA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 257 LGANFEFDLKKIIALSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLT 336
Cdd:MTH00108 290 ICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFT 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 337 SVCFNVSSLSLCGMPFLAGFYSKDLILEIVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNFYPSYFFDDNSYF 416
Cdd:MTH00108 370 STALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPL 449
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 584593735 417 ISFGMIGLLFVAVFGGSFLSWLIFP--IPYMiVLPWYLKFLTMFVVILGCYL 466
Cdd:MTH00108 450 LINPIKRLLLGSIFAGFLISNNIPPttIPQM-TMPLYLKLTALAVTILGFIL 500
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
34-470 |
5.06e-89 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 286.87 E-value: 5.06e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 34 WELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWD 113
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 114 GLGLVSYCLV-IYYQNVKSYNAGMLTALSNRIGDVSILISIAWMLN-FGSWNY--VNYYYFILDSFEMSIITILINLAAM 189
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFqeVFALAPGAFFSALTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM-LLINNYGWFLLLIGCMTMFMAGLGANFEFDLKKI 268
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLfELSPTALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 269 IALSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLC 348
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 349 GMPFLAGFYSKDLILEIVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNFYPSYFFDDNSYFISFGMIGLLFVA 428
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 584593735 429 VFGGSFLSWLIFPIPYMIV-----------LPWYLKFLTMFVVILGCYLGYLI 470
Cdd:TIGR01974 465 VFAGFFIVPLFEFLKGVLPtsaepalehhhVPALEIWSPTAVAILGILLAYLL 517
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
46-406 |
3.39e-88 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 284.80 E-value: 3.39e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 46 MTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:MTH00137 82 ISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGW 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 126 YQNVKSYNAGMLTA-LSNRIGDVSILISIAWML-NFGSWNyVNYYYFILDSFEMSIITILINLAAMTKSAQIPFSSWLPA 203
Cdd:MTH00137 162 WYGRADANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWE-IQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPS 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 204 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNygwfLLLIGCM------TMFMA--GLGANfefDLKKIIALSTLS 275
Cdd:MTH00137 241 AMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQ----TALTTCLclgaltTLFTAtcALTQN---DIKKIVAFSTSS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 276 QLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAG 355
Cdd:MTH00137 314 QLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAG 393
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 584593735 356 FYSKDLILEIVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNFYP 406
Cdd:MTH00137 394 FFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNP 444
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
46-470 |
9.98e-87 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 281.28 E-value: 9.98e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 46 MTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 126 YQNVKSYNAGMLTA-LSNRIGDVSILISIAWML-NFGSWNY-----VNYYYFILDSFEMSIITILINLAAMTKSAQIPFS 198
Cdd:PRK06590 158 WYKKPSAGAAAMKAfIVNRVGDVGLALGIFLLFaEFGSLNYdevfaAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 199 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM-LLINNYGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLfELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 278 GLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFY 357
Cdd:PRK06590 318 GYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFF 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 358 SKDLILEiVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMG---DNNFYPSyffdDNSYFISFGMIGLLFVAVFGG-- 432
Cdd:PRK06590 398 SKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGkekEKIHHPH----ESPAVMTLPLIVLAVLSVFAGal 472
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 584593735 433 ---SFLSWLIFP-----IPYMIVLPWYLKFLTMFVVILGCYLGYLI 470
Cdd:PRK06590 473 ivpPFLGVLPLTtelahGEAEHHLPVWVALLPLVVALAGIALAWLL 518
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
34-548 |
1.27e-77 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 256.93 E-value: 1.27e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 34 WELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWD 113
Cdd:MTH00020 62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 114 GLGLVSYCLV-IYYQNVKSYNAGMLTALSNRIGDVSILISIAWMLN-FGSWNYVNYYYFIL--DSFEMSIITILINLAAM 189
Cdd:MTH00020 142 GVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFSSVFNMVVsaPSSDITLICLFLFIGAV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNYGWFLL-LIGCMTMFMAGLGANFEFDLKKI 268
Cdd:MTH00020 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKV 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 269 IALSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLC 348
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 349 GMPFLAGFYSKDLILEIVCLDwiNFLIFILYF--ISTGLTASYSFRLFYYSMMGDNNFYPSYFFD--DNSYFISFGMIGL 424
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQ--YYLIFAYWLgcFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHlhEGDWNLLLPLGIL 459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 425 LFVAVFGGSFLSWLI--FPIPYMIVLPWYLKFLTMFVVILGCYLGYLISDF--DYFYGLFSLSFLSFVSFVGSMWFMPFL 500
Cdd:MTH00020 460 ALGSIFVGYLAKEMIwsFQITLPPIVPLSIKLLPVFLSLGGIGLVIILYFYssKTFRVPFSFIGRNSYTFLGSAWQFNYI 539
|
490 500 510 520
....*....|....*....|....*....|....*....|....*....
gi 584593735 501 STNYISYLPLKFGYELS-KSFDYGWGELLGGQGLYSFFLYVINYIQSLY 548
Cdd:MTH00020 540 LNYFLIKKIWKGGHLISyRTIDKGVLELVGPKGISNFLIILTQGLSSLQ 588
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
50-560 |
2.88e-77 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 256.09 E-value: 2.88e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 50 FDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLV-IYYQN 128
Cdd:MTH00210 78 FDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWLTR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 129 VKSYNAGMLTALSNRIGDVSILISIAWMLN-FGSWNYV---NYYYFILDSFEMSIITILINLAAMTKSAQIPFSSWLPAA 204
Cdd:MTH00210 158 IKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFStisSLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 205 MAAPTPVSALVHSSTLVTAGVYLLIR------FSPMLLInnygwFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG 278
Cdd:MTH00210 238 MEGPTPVSALIHAATMVTAGVFLIIRsgplfeGSPLALT-----IVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLG 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 279 LMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYS 358
Cdd:MTH00210 313 YMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYS 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 359 KDLILEIVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNFYPSYFF--DDNSYFISFGMIGLLFVAVFGGS--- 433
Cdd:MTH00210 393 KDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIgvHESSWNITFPLLLLAFGSIFVGYlgk 472
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 434 --FLSWLIFPIpymivLPWYLKFLTMFVVILGCYLGYLISDFDYFY------GLFSLSFLSFVSFVGSMWFMPFLSTNYI 505
Cdd:MTH00210 473 evVLSNVIPPI-----VPNSIKMIPLLFSLLGALLAFVIYNSMVFLikisrrGVSIRLYHVIYTFLNSAWQFNYVINHFI 547
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 584593735 506 SYLPLKFGYELS-KSFDYGWGELLGGQGLYSFFLYVINYIQSLYDSNFKVYLLTFI 560
Cdd:MTH00210 548 VKNIWKFGHLITyRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALIMI 603
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
31-522 |
5.83e-66 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 223.64 E-value: 5.83e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 31 FIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILL 110
Cdd:MTH00095 24 FMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 111 GWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVSILISIAWMLNFGswnyvnyYYFILDSFEMSIITILINLAAMT 190
Cdd:MTH00095 104 SWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS-------YYFFSFSFFSSSMILMLLLTSFT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNYGWFLLLIGCMTMFMAGLGANFEFDLKKIIA 270
Cdd:MTH00095 177 KSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 271 LSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGM 350
Cdd:MTH00095 257 LSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGL 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 351 PFLAGFYSKDLILEIVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNFYPSYFFDDNSYFISFGMIgllfvaVF 430
Cdd:MTH00095 337 MFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSSVLMNFLSLMLV------FF 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 431 GGSFLSWLIFPIPYMIVLPWYLKFLT----MFVVILGCYLGYLISDFDYFYGLFSLSFLSFVSFVGSMWFMPFLSTNYIS 506
Cdd:MTH00095 411 SVFFLWWLNFNLLNLPSLFLYLDFYVplfyLFMIMLFSFFFFKLLFKELKYKFFVDYFAKNVIYKLKNLKFFDLFLNKFG 490
|
490
....*....|....*.
gi 584593735 507 YLPLKFGYELSKSFDY 522
Cdd:MTH00095 491 YKGFNFFSSFSFFFFS 506
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
46-401 |
9.82e-62 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 215.66 E-value: 9.82e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 46 MTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLV-I 124
Cdd:PRK07376 85 MGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVgF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 125 YYQNVKSYNAGMLTALSNRIGDVSILISIAWMlnfgswnyvnyyYFILDSFEMSII---------------------TIL 183
Cdd:PRK07376 165 WYDRKGAADAAQKAFVVNRVGDFGLLLGILGL------------FWATGSFDFDGIadrlselvssgavsgwlalllCIL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 184 INLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LINNYGWFLLLIGCMTMFMAGLGANFE 262
Cdd:PRK07376 233 VFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFeQFPAVMTVIAWTGAITAFLGASIALTQ 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 263 FDLKKIIALSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKD--------SQDIRFMGSIVNFMP 334
Cdd:PRK07376 313 NDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMP 392
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 584593735 335 LTSVCFNVSSLSLCGMPFLAGFYSKDLILEIVCLDwiNFLIFILYFISTGLTASYSFRLFYYSMMGD 401
Cdd:PRK07376 393 ITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
35-560 |
4.93e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 210.97 E-value: 4.93e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 35 ELFSLNSSMVVMTFI---FDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLG 111
Cdd:MTH00032 60 ELYKWIESEIFITHIgllYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIG 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 112 WDGLGLVSYCLVIYYQN-VKSYNAGMLTALSNRIGDVSILISIAWM------LNFGSWNYVNYYYFILDS---------- 174
Cdd:MTH00032 140 WEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTFNGGSVGSGIMDRgyygggayes 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 175 --FEMSIITILINLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNYGWFLLLI-GCMT 251
Cdd:MTH00032 220 plAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIfGALT 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 252 MFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSM-GYSGLAFFHLLTHALFKALLFMCAGSMIHNLK-DSQDIRFMGSI 329
Cdd:MTH00032 300 AFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGL 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 330 VNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEIV------------CLDWINFLI---------------------- 375
Cdd:MTH00032 380 IHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTysgrnmgipfgsSLLKIQGDIgikkddrgsiggpegypsrgsa 459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 376 --FILYFISTGLTASYSFRLFYYSMMGDNNFYPSYFFDDNSYFISFGMIGLLFVAVFGGSFLSWLIFPI----------- 442
Cdd:MTH00032 460 faFWLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIQDIligdiehpivp 539
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 443 PYMIVLPWYLKFLTMFVVILGCYLGYLISDFDYFYGLFSLSFLSFVSFVGSMWFMPFLSTNYISYLPLKFG-YELSKSFD 521
Cdd:MTH00032 540 PLIKVMPTLMGLFGMGLCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLGGAWQGDHLINKLVAIPLFSFGhWGIYKTLD 619
|
570 580 590
....*....|....*....|....*....|....*....
gi 584593735 522 YGWGELLGGQGLYSFFLYVINYIQSLYDSNFKVYLLTFI 560
Cdd:MTH00032 620 RGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVLL 658
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
102-382 |
2.07e-56 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 191.37 E-value: 2.07e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 102 SPNLISILLGWDGLGLVSYCLVIYY-QNVKSYNAGMLTALSNRIGDVSILISIAWMLNFGSWNY----VNYYYFILDSFE 176
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSfdelSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 177 MSIITILINLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLLI--NNYGWFLLLIGCMTMF 253
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPssPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 254 MAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSG---LAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIV 330
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 584593735 331 NFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEIVCLDWINFLIFILYFIS 382
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
47-396 |
7.13e-51 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 180.73 E-value: 7.13e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 47 TFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 127 QNVKSYNAGMLTALSNRIGDVSILISIAWM-LNFGSWNYVNYYYFI--LDSFEMSIITILINLAAMTKSAQIPFSSWLPA 203
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLaeLDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 204 AMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLL----INNYGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG 278
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLFgadpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 279 LMMSILSMG-YSGL--AFFHLLTHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAG 355
Cdd:COG0651 310 YILLGLGLGtPLGLagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 584593735 356 FYSKDLILEIVcLDWINFLIFILYFISTGLTASYSFRLFYY 396
Cdd:COG0651 389 FVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
51-393 |
5.96e-50 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 185.63 E-value: 5.96e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 51 DWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIyyQNVK 130
Cdd:PRK12650 78 DALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA--RSGS 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 131 SYNAG-MLTALSNRIGDVSILISIAWMLN-FGSWNYVNyyyfILDSFE-------MSIITILINLAAMTKSAQIPFSSWL 201
Cdd:PRK12650 156 GGEAGsIRTLILTFFGGLTLLAAVAIAATqTGTTSLSG----ILHSDVwaekpglTTVVAVLIAVAAFTKSAQFPFHFWL 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 202 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmLLINNYGWFLLLIGC--MTMFMAGLGANFEFDLKKIIALSTLSQLGL 279
Cdd:PRK12650 232 PEAMAAITPVSAFLHAAAVVKAGIYLLLRFSP-VFHDVAVWNWLLIIVgmITALMGAVFAVQKTDLKKLTAYSTVSQLGW 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 280 MMSILSMGYS---GLAFFHLLTHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGF 356
Cdd:PRK12650 311 IVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGF 389
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 584593735 357 YSKDLILEIVCLDWINFLIFILYFISTGLTA----SYSFRL 393
Cdd:PRK12650 390 VSKEGMLTAFLEAPGGNAGVVLLLVGAALGAvftfAYSARL 430
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
67-423 |
8.81e-46 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 172.00 E-value: 8.81e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 67 LVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLV-IYYQNVKSYNAGMLTALSNRIG 145
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 146 DVSILISIA---WM-------------LNFGSWNYVNYYYFILdsfemsiITILINLAAMTKSAQIPFSSWLPAAMAAPT 209
Cdd:CHL00025 186 DFGLLLGILgfyWItgsfefrdlfeifNNLIYNNEVNLLFATL-------CAFLLFLGPVAKSAQFPLHVWLPDAMEGPT 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 210 PVSALVHSSTLVTAGVYLLIR----FSPMLLINNygwFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILS 285
Cdd:CHL00025 259 PISALIHAATMVAAGIFLVARllplFIVIPYIMN---LISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALG 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 286 MGYSGLAFFHLLTHALFKALLFMCAGSMIHNL--------KDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFY 357
Cdd:CHL00025 336 IGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFW 415
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 584593735 358 SKDlilEIVCLDWINFLIF-ILYFISTGLTASYSFRLFYYSMMGDNNFY-PSYFFDDNSYFISFGMIG 423
Cdd:CHL00025 416 SKD---EILNDSWLYSPIFaIIAWSTAGLTAFYMFRIYLLTFEGHLRVHfQNYSGKKNSSFYSISLWG 480
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
47-400 |
1.25e-45 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 172.34 E-value: 1.25e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 47 TFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 127 -QNVKSYNAGMLTALSNRIGDVSILISIAWML----NFGSWNYVNYYYFILDSFEMSIITILINLAAMTKSAQIPFSSWL 201
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 202 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP-MLLINNYGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM 280
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPvFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 281 MSILSMGYSGL----------------AFFHLLTHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:TIGR00940 310 MVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 584593735 345 LSLCGMPFLAGFYSKDLILE---------IVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMG 400
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFAeaitahlvnPFDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-364 |
1.75e-45 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 171.26 E-value: 1.75e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 48 FIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY-Y 126
Cdd:PRK12647 60 FLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFnH 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 127 QNVKSYNAGM------------LTALSNRIGDVSILISIAWMLNFGSWNYVNYYYFIldsfemsiITILINLAAMTKSAQ 194
Cdd:PRK12647 140 EREAARRAALqallvtgggglaLLAGLILLGNVTGTYSLSELLASGDVIREHPLYLA--------ILLLVLGGAFTKSAQ 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 195 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmLLINNYGWF--LLLIGCMTMFMAGLGANFEFDLKKIIALS 272
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNP-VLGGTPLWQtiLPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 273 TLSQLGLMMSILSMGYSGL---AFFHLLTHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCG 349
Cdd:PRK12647 291 TVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
330
....*....|....*
gi 584593735 350 MPFLAGFYSKDLILE 364
Cdd:PRK12647 370 LPPLFGFLAKELIYE 384
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-392 |
2.85e-45 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 171.91 E-value: 2.85e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 47 TFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 127 QNVKSYNAGMLTALSnrIGDVSILISIAWMLNFGSwnyvnyyyfILDSFEMSII----------------TILINLAAMT 190
Cdd:PRK12648 151 HHRADARRGARMALT--VTGAGGLALLAGVLLLGH---------IVGSYDLDVVlaagdlirahplyppaLVLILLGAFT 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNYgWFLL--LIGCMTMFMAGLGANFEFDLKKI 268
Cdd:PRK12648 220 KSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEE-WFWIvgGAGLITLLLGAYFALFQHDLKGL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 269 IALSTLSQLGLMMSILSMGySGLA----FFHLLTHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:PRK12648 299 LAYSTISHLGLITLLLGLG-SPLAavaaIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAA 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 584593735 345 LSLCGMPFLAGFYSKDL----ILEIVCLDWINFLIFILYFISTGLTASYSFR 392
Cdd:PRK12648 377 AAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-395 |
4.68e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 165.10 E-value: 4.68e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 47 TFIFDWMSLIFMSFVMYISSLVIYYSNDYM-HNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK12644 69 AFRLDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGH 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 126 YQNVKS-----YNAGMLTALsnriGDVSILISIAWMLNF-GSWNYVNYYYFILDSFEMSIITILINLAAMTKSAQIPFSS 199
Cdd:PRK12644 149 YAERAAsrraaLQALLVTTA----GGLAMLVGIIILGQAaGTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPFHF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 200 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLL-INNYGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG 278
Cdd:PRK12644 225 WLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFAdVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLG 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 279 LMMSILSMGYS-----GLAFfhLLTHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFL 353
Cdd:PRK12644 305 FLTVLVGIGTRdaalaGLAM--LLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPL 381
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 584593735 354 AGFYSKDLILEIV----CLDWINFLIFILYFISTGLTASYSFRLFY 395
Cdd:PRK12644 382 LGFVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
48-364 |
7.25e-43 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 164.16 E-value: 7.25e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 48 FIFDWMSLIFMSFVMYISSLVIYYSNDYM-HNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY- 125
Cdd:PRK12646 74 LRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYw 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 126 YQNVKSYNAGMLTALSNRIGDVSILISIAWMLNFGSWNYVNYYYFILDSFEMS----IITILINLAAMTKSAQIPFSSWL 201
Cdd:PRK12646 154 YNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHglfiPMIFMFLLGAFTKSAQFPFHIWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 202 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LINNYGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM 280
Cdd:PRK12646 234 PRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLgLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMI 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 281 MSILSMGySGLA------------------FFHLLTHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNV 342
Cdd:PRK12646 314 MAMVGIG-GGYAqhqqdaiasiyvfvlfaaLFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTI 391
|
330 340
....*....|....*....|..
gi 584593735 343 SSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK12646 392 AALSMAGVPFLNGFLSKEMFLD 413
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
51-400 |
9.60e-43 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 163.56 E-value: 9.60e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 51 DWMSLIFMSFVMYISSLVIYYSNDYMHNES-NINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY-YQN 128
Cdd:PRK12645 77 DGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYwYER 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 129 VKSYNAGMLTALSNRIGDVSIL------------ISIAWMLNFGSwNYVNYYYFILdsfemsiITILINLAAMTKSAQIP 196
Cdd:PRK12645 157 EASRYGAQKSMLITVFGGLSMLggfillyimtgsFSIREMIANAD-EIQNSPLFIP-------AMILILLGAFTKSAQFP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 197 FSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNyGWFLL--LIGCMTMFMAGLGANFEFDLKKIIALSTL 274
Cdd:PRK12645 229 FYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQ-VWFWTvtLVGLITLFWGSLNAVKQTDLKGILAFSTV 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 275 SQLGLMMSILSMGYSGL----------------AFFHLLTHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSV 338
Cdd:PRK12645 308 SQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFT 386
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 584593735 339 CFNVSSLSLCGMPFLAGFYSKDLILE---------IVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMG 400
Cdd:PRK12645 387 IALIGALSMAGLPPFNGFLSKEMFFEsmlnateanLFSLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFG 457
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
29-472 |
8.54e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 157.73 E-value: 8.54e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 29 SVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISI 108
Cdd:MTH00063 22 SSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLST 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 109 LLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVSILISIAWmlnfGSWNYVNYYYFILdsfemsiitiLINLAA 188
Cdd:MTH00063 102 LIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL----SCWGGSGSFLCCL----------FFFLIV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 189 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNYGWFLLLIGCMTMFMAGLGANFEFDLKKI 268
Cdd:MTH00063 168 FTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 269 IALSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIR-----FMGSIVNFMPLTSVCfnvs 343
Cdd:MTH00063 248 VALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNcvyssILYGSWNLFYLFLLV---- 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 344 sLSLCGMPFLAGFYSKDLILEIVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNFYPSYFFDdnsYFISFGMig 423
Cdd:MTH00063 324 -LGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILFGVKSSLSSGVRFL---FFNSGLM-- 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 584593735 424 llfvaVFGGSFLSWLIFPI-PYMIVLPWYLKFLTMFVVILGCYLGYLISD 472
Cdd:MTH00063 398 -----VFLWLFINYYVFLLlDEVVYLGVFISLVLLLVQLLGLLVGVLFYD 442
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
30-363 |
2.23e-40 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 152.82 E-value: 2.23e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 30 VFIEWELFSLNSsMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNE-------SNINRFVMIVLMFIFSMVLLIIS 102
Cdd:PRK06525 54 VAVTLTLVNLGD-VALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPGnrehpvhEGTGRYYAFLLLFIGAMAGLVYS 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 103 PNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVSILISIAWM-LNFGSWNYVNYYYfiLDSFEMSIIT 181
Cdd:PRK06525 133 STLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLfLQTGTFALSALSG--LHGSLKYLVF 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 182 ILINLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFspMLLINNY----GWFLLLIGCMTMFMAGL 257
Cdd:PRK06525 211 LGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGPIphviGYVGAVMAIVTLLYGFL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 258 GANFEFDLKKIIALSTLSQLGLMMSILSMGYSGL------AFFHLLTHALFKALLFMCAGSMIHNLkDSQDIRFMGSIVN 331
Cdd:PRK06525 289 MYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSC-GTRLLPRLRGVLK 367
|
330 340 350
....*....|....*....|....*....|..
gi 584593735 332 FMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK06525 368 KLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
389-560 |
3.41e-39 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 141.53 E-value: 3.41e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 389 YSFRLFYYSMMGDNNFYPSYFFDDNSYFISFGMIGLLFVAVFGGSFLSWLIFPIPYMIVLPWYLKFLTMFVVILGCYLGY 468
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 469 LISDFDYFYGLFSLSFlSFVSFVGSMWFMPFLSTNYISYLPLKFGYELSKSFDYGWGELLGGQGLYSFFLYVINYIQSLY 548
Cdd:pfam06455 81 ELSNLSNKQLKKSLNF-NLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170
....*....|..
gi 584593735 549 DSNFKVYLLTFI 560
Cdd:pfam06455 160 KGLIKIYLLSFL 171
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
39-364 |
1.14e-35 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 142.66 E-value: 1.14e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 39 LNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLV 118
Cdd:PRK12649 67 LPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSIT 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 119 SYCLVIYYQNVKSYNAG-----MLTALSNRIGDVSILISIAWMLNFGSWNYVNYYYFI--LDSFEMSIIT-ILINLAAMT 190
Cdd:PRK12649 147 SFMLIGYWRHRPESVYGatkslLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenIKGHPLFLITlILIFIGAAA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmLLINNYGWFLLL--IGCMTMFMAGLGANFEFDLKKI 268
Cdd:PRK12649 227 KSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHP-IFSGTEAWFILVsgTGMITMVLAGFLAFRQTDIKAI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 269 IALSTLSQLGLMMSIlsMGYS---------GLAFFHLLTHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVC 339
Cdd:PRK12649 306 LAYSTISQLAYLMTM--YGYTtyhepglgvAAATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIV 382
|
330 340
....*....|....*....|....*
gi 584593735 340 FNVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK12649 383 ASIAALAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-400 |
2.72e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 133.08 E-value: 2.72e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 47 TFIFDWMSLIFMSFVMYISSLVIYYSNDYmhNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYAIGY--GEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 127 QNVKSYNAGMLTALSNRIGDVSILISIAwmLNFGSWNYVNYYYF---ILDSFEMSIITILINLAAMTKSAQIPFSSWLPA 203
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVG--LLYGVTGTLNMADLagaLAENPTVVTAFGFVLLALALKAAVFPLHTWLPR 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 204 AMAAPTPVSALVHSSTLVTAGVYLLIRFS------PMLLINNYGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK08375 228 AYPAAPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 278 GLMMSILSMG-YSGL--AFFHLLTHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLA 354
Cdd:PRK08375 308 GYILLGLALLtPLALaaGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTS 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 584593735 355 GFYSK-DLILEIVCLDWINFLIFILyfISTGLTASYSFRLFYYSMMG 400
Cdd:PRK08375 387 GFVSKwYLVVGAVEAGQWLVLAVLL--ASSLLALLYFLRIWYRAFFG 431
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
46-364 |
6.26e-29 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 121.38 E-value: 6.26e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 46 MTFIFDWMSLIFMSFVMYISSLVIYYS---NDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCL 122
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSlgyNEHMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 123 VIY-YQNVKSYNAGMLTALSNRIGDVSILISIAWM-LNFGSWNYVNYYYfilDSFEMSIITILINLAAMTKSAQIPFSSW 200
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTGSFELSPLGA---SAGILSLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 201 LPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLLINNYGW--FLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK08667 228 LPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWgvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENI 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 278 GLMM--------------SILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDsQDIRFMGSIVNFMPLTSVCFNVS 343
Cdd:PRK08667 307 GIILmgiglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVG 385
|
330 340
....*....|....*....|.
gi 584593735 344 SLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK08667 386 AVSIAALPPFNGFASELLLYE 406
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
53-312 |
3.55e-28 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 118.26 E-value: 3.55e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 53 MSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKsy 132
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 133 nAGMLTA----LSNRIGDVSILISIA-WMLNFGSWNyVNYYYFILDSFEMS----IITILINLAAMTKSAQIPFSSWLPA 203
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLS-LSALWAHLAAQGASpslqAAALLLVLAVILKTAQLPVHGWLIQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 204 AMAAPTPVSALVHSStLVTAGVYLLIRFSPMLLINNYG-WFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS 282
Cdd:PRK08168 226 VMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
250 260 270
....*....|....*....|....*....|
gi 584593735 283 ILSMGYSGLAFFHLLTHALFKALLFMCAGS 312
Cdd:PRK08168 305 ECGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
91-363 |
7.65e-28 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 118.45 E-value: 7.65e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 91 MFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKS-YNAGMLTALSNRIGDVSILISIAWML-NFGSWNYVNYY 168
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLLArESGSYDFAAMR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 169 YFILDSFEMSIITILINLAAMTKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLLINNYGW---FL 244
Cdd:PRK06521 201 AAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWwgvLV 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 245 LLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSGLA--------------FFHLLTHALFKALLFMCA 310
Cdd:PRK06521 280 LALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLAMVFIAygmpllaalaltaaLYHLLNHALFKSLLFLGA 359
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 584593735 311 GSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK06521 360 GAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLL 411
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-395 |
1.68e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 112.99 E-value: 1.68e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 55 LIFMSFVMYISSLVIYYSNDYM--HNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSY 132
Cdd:PRK06589 86 LIFLLLIGFLWICALLYTPKYLaiNNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISL 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 133 NAGmLTALSNRIGDVSILISIAWMLNFGSWNYVNYYYFILDSFEMSIITILINLAAMTKSAQIPFSSWLPAAMAAPTPVS 212
Cdd:PRK06589 166 SGG-YKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVS 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 213 ALVHSSTLVTAGVYLLIR-------FSPMLLINNYGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMM---S 282
Cdd:PRK06589 245 ALLHAVIVVKTGLFCIYKillyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALlsaF 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 283 ILSMGYSGLAFFHLLTHALFKALLFMCAGSmIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLI 362
Cdd:PRK06589 325 ILTPKALGAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLI 403
|
330 340 350
....*....|....*....|....*....|....*.
gi 584593735 363 LEIVCLD---WINFLIFILYFISTGLTASYSFRLFY 395
Cdd:PRK06589 404 LLAASEQnqpWLSIIVMLVVIASSILSALYLLKILS 439
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-400 |
8.87e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 105.18 E-value: 8.87e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 48 FIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQ 127
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 128 NV-KSYNAGMLTALSNRIGDVSILISIAwmLNFGSWNYVNYYYFILDSFEMSIITILINLAAMT-----KSAQIPFSSWL 201
Cdd:PRK08376 166 DTwEAIEAGIKYMFVGSLASSMVLLGIA--LLYGQYGTLNMAYLAVKMSENPTVVAKIALALFIaglamKSGAVPVHMWL 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 202 PAAM-AAPTPVSALVHSSTLvtAGVYLLIR-----FSPMLLINNYGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLS 275
Cdd:PRK08376 244 PDAYpAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVS 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 276 QLGLMMSILSMGYSGL---------------AFFHLLTHALFKALLFMCAGSMIHNLkDSQDIRFMGSIVNFMPLTSVCF 340
Cdd:PRK08376 322 QIGYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAF 400
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 341 NVSSLSLCGMPFLAGFYSKDLILEIVCLdwINFLIFILYFISTGLTASYSFRLFYYSMMG 400
Cdd:PRK08376 401 LIGAAAIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-395 |
1.51e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 104.28 E-value: 1.51e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 47 TFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK12667 77 VYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYY 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 127 QNVK-SYNAGMLTALSNRIGDVSILISIAWMLN-FGSWNYVN------YYYFILDSFEMSIITILINLAA-------MTK 191
Cdd:PRK12667 157 RDRGdAVEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNMADlsakirGLSFPLTGGLAGNPPLALGVALalalwafTIK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 192 SAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF---------SPMLLINNYGWFLLLIGCMTMFMAGLGANF 261
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgispSLIDFRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 262 EFDLKKIIALSTLSQLGLMMSILSMGYS---GLAFFHLLTHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSV 338
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASF 394
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 584593735 339 CFNVSSLSLCGMPFLAGFYSKDLILEIVCLDWINFLIFILyFISTGLTASYSFRLFY 395
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL-LIASAISLVGYFRAWY 450
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
140-358 |
4.94e-23 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 103.07 E-value: 4.94e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 140 LSNRIGDVSILISIAWMLNF-GSWNYVNYYYFI----LDSFEMSIITILINLAAMTKSAQIPFSSWLPAAMAAPTPVSAL 214
Cdd:PRK07390 178 LTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAatanLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASIL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 215 vHSSTLVTAGVYLLIRFSPMLLINNYGW-FLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSGLAF 293
Cdd:PRK07390 258 -RNSVVVATGAWVLIKLQPVLALSPVALtVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIAL 336
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 584593735 294 FHLLTHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYS 358
Cdd:PRK07390 337 LLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
85-364 |
7.03e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 101.95 E-value: 7.03e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 85 FVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGM-LTALSNrIGDVSILISIAWMlnfgswn 163
Cdd:PRK07234 96 FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLrYLFYSN-VAMLFYLIGAVLV------- 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 164 yvnyyYFILDSFEMSIIT-------ILINLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSpmLL 236
Cdd:PRK07234 168 -----YQANGTFAFSGLAtadpeafALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA--LD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 237 INNYGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGysglAFFHlLTHALFKALLFMCAGSmIHN 316
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYA-LAHGLVKSTLFLCAGA-LPS 314
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 584593735 317 LKDSQDIRFMGSIVNFMPLTsvcfnVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK07234 315 RNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
36-312 |
4.74e-19 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 90.48 E-value: 4.74e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 36 LFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWdGL 115
Cdd:PRK08601 56 LIGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCW-GA 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 116 GLVSYCLVIyyqNVKSY-----NAGMLTALSNRIGDVSILISIAWM-LNFGSW----NYVNYYYFILDSFEMSIITILIN 185
Cdd:PRK08601 135 TLLGLTLLI---GLNKGwkvarEAAKISGMLFLISWLALALAIVWLfIATGEWqltsVLSNENLAQLGTWEKTGINLLLI 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 186 LAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPmLLINNYGWFLLLIGCMTMFMAGLGANF-EFD 264
Cdd:PRK08601 212 LAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSP-LFHDDIAQILLLIFASISVLIGTGISLvQVD 289
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 584593735 265 LKKIIALSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGS 312
Cdd:PRK08601 290 YKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGS 337
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
105-396 |
1.22e-18 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 89.57 E-value: 1.22e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 105 LISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVSILISIAW-MLNFGSWNyvnyyyFILDSFEMSIITIL 183
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSFA------FGAIAGLGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 184 INLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmllinnyGWFLLL-IGC-MTMFMAGLgANF 261
Cdd:PRK12668 189 ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP-------GTELLIyIGAaMAVYGVFF-ALL 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 262 EFDLKKIIALSTLSQLGLMMSILSMGySGL----AFFHLLTHALFKALLFMCAGSMIHNLKDSqDIRFMGSIVNFMPLTS 337
Cdd:PRK12668 261 ENDLRRLLSYHIVSQVGYMVAGIGIG-TALaingAVAHAFNHILYKGLLFMSAGAVLYRTGTE-KLTELGGLYRSMPLTA 338
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 584593735 338 VCFNVSSLSLCGMPFLAGFYSKDLILEIVCLDWINFLIFILYFISTGLTASYSFRLFYY 396
Cdd:PRK12668 339 LFCLVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAGTFLHFGIKLPYF 397
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
196-400 |
1.73e-18 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 88.60 E-value: 1.73e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 196 PFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFSPMLL---INNYGWFLLLIGCMTMFMAGLGANFEFDLKKIIAL 271
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFALPLFpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 272 STLSQLGLMM----SILSMGYSGlAFFHLLTHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSL 347
Cdd:COG1008 306 SSVSHMGFVLlgifALNPLGLQG-AVLQMVSHGLITAALFLLVGVLYDRTH-TRDIADLGGLAKRMPVLAALFLLAALAS 383
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 584593735 348 CGMPFLAGFYSKDLILEIVcldW-INFLIFILYFISTGLTASYSFRLFYYSMMG 400
Cdd:COG1008 384 LGLPGTSGFVGEFLVLLGA---FqVNPWLAILAALGLILTAAYLLWMYQRVFFG 434
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
60-393 |
1.88e-18 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 88.29 E-value: 1.88e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 60 FVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTA 139
Cdd:PRK08377 85 LIIAIVSFIMSIFSLKAVEVEPIDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYI 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 140 LSNRIGDVSILISIAwmLNFGSWNYVNYYYFILDSFEMSIITILINLAAM-----TKSAQIPFSSWLPAA-MAAPTPVSA 213
Cdd:PRK08377 165 VLGGIGSSFFLIGVA--LIYGATGTLNMAHIAQLAGTIDPTVAQVGLALLifglaVEAELFPLNAWAPDAyQAAPHPITV 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 214 LVhSSTLVTAGVYLLIRFSPMLLI----NNYGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYS 289
Cdd:PRK08377 243 MF-SAFVVKAGLYAMARILYLMQNangwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQ 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 290 G---LAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNfMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILeIV 366
Cdd:PRK08377 322 AgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKR-MPLTALALTIGALSTVGIPLFNVFWSKFRII-LA 399
|
330 340
....*....|....*....|....*..
gi 584593735 367 CLDWINFLIFILYFISTGLTASYSFRL 393
Cdd:PRK08377 400 GLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
37-395 |
2.01e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 82.35 E-value: 2.01e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 37 FSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSNDYmhNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLG 116
Cdd:PRK08668 54 LTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSE--KTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMT 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 117 LVSYcLVIYYQNVKSYNAGMLTALSNRIGDVSILISIAWMLN-FGSWNYVNYYYFILD--SFEMS-IITILINLAAMTKS 192
Cdd:PRK08668 132 FSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQGLINdtSTGFAlIVFLFLLAFGVAKA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 193 AQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFSPMLL-------------INNYGWFLLLIGCMTMFMAGLG 258
Cdd:PRK08668 211 GIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLYVLPgtklfsefgtyrgVPLFNYILAWLGNISIIVGTLM 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 259 ANFEFDLKKIIALSTLSQLGLMMSILSMGYS---GLAFFHLLTHALFKALLFMCAGSMIHNLKDSQdIRFMGSIVNFMPL 335
Cdd:PRK08668 290 AILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTK-ISEMGGLIEKMPF 368
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 336 TSVCFNVSSLSLCGMPFLAGFYSKDLILEIVCLDWINFLIFILYFISTGLTAsYSFRLFY 395
Cdd:PRK08668 369 TFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFL-YVFRPLA 427
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
51-400 |
2.95e-16 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 81.52 E-value: 2.95e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 51 DWMSLIFMSFVMYISSLVIYYSNDYMHNESninRFVMIVLMFIFSMVL-LIISPNLISILLGWDGLGLVSYCLVIYYQNV 129
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQKRV---KEFYALLLLLEAGVIgVFLALDLFLFYVFWEAMLIPMYLLIGVWGGP 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 130 KSYNAGMLTALSNRIGDVSILISIAWM--LNFGSWNYVNYYYFILDSFEMSIITILINLAAMTKSAQIPFSSWLPAAMA- 206
Cdd:TIGR01972 153 NRIYAAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVe 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 207 APTPVSALVhSSTLVTAGVYLLIRFSPMLLINNYGWFLLLI---GCMTMFMAGLGANFEFDLKKIIALSTLSQLGL-MMS 282
Cdd:TIGR01972 233 APTAGSVIL-AGVLLKMGTYGFLRFNLPLFPDASLYFAPVLaalGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 283 ILSM---GYSGlAFFHLLTHALFKALLFMCAGsMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSK 359
Cdd:TIGR01972 312 IFSFnelGISG-AVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGE 389
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 584593735 360 DLILeiVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMG 400
Cdd:TIGR01972 390 FLIL--LGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFG 428
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
195-356 |
7.40e-15 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 77.56 E-value: 7.40e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 195 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSpmlLINN-----YGWFLLLIGCMTMFMAGLGANFEFDLKKI 268
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLS---LLGGnaplwWGVALLVLGMITAFVGGLYALMEHNIQRL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 269 IALSTLSQLGLMMSILSMGYSGLA--------------FFHLLTHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMP 334
Cdd:PRK08042 273 LAYHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMP 351
|
170 180
....*....|....*....|..
gi 584593735 335 LTSVCFNVSSLSLCGMPFLAGF 356
Cdd:PRK08042 352 VISIAMLVGLMAMAALPPLNGF 373
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
177-406 |
1.20e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 76.53 E-value: 1.20e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 177 MSIITILINLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLLINNYGW---FLLLIGCMTM 252
Cdd:PRK07691 208 ITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFthyLILILALLTI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 253 FMAGLGANFEFDLKKIIALSTLSQLGLM-MSILSMGYSGL--AFFHLLTHALFKALLFMCAGSMIHnLKDSQDIRFMGSI 329
Cdd:PRK07691 287 IFGVIGAVAYFDIKKIIIYNIMIAVGVIlVGVAMMTESGMigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGL 365
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 584593735 330 VNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEiVCLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNFYP 406
Cdd:PRK07691 366 IKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWGEPKGYD 441
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
173-403 |
4.47e-14 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 74.60 E-value: 4.47e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 173 DSFEMSIITILINLAAMTKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNYG---WFLLLIGC 249
Cdd:PRK12663 202 DTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQEREllhPLLATMAA 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 250 MTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS-ILSMGYSGL--AFFHLLTHALFKALLFMCAGSMIHnLKDSQDIRFM 326
Cdd:PRK12663 281 ITMVIGALGALAYKDIRRIAGYQVISSIGFILLgLALGTPAGIngAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYL 359
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 584593735 327 GSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEiVCLDWINFLIFILYFIsTGLTASYS-FRLFYYSMMGDNN 403
Cdd:PRK12663 360 GGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ-GALDNGAYILLALMLI-TSLITMYSlFRIFFLAYWGDKD 435
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
140-401 |
2.43e-13 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 72.54 E-value: 2.43e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 140 LSNRIGDVSILISIAWM-----LNFGSWNYVNYYYFILDSFEMSIITILINLAAMTKSAQIPFSSWLPAAMA-APTPVSA 213
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVqAPTAGSV 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 214 LvHSSTLVTAGVYLLIRFSPMLLIN---NYGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG-LMMSILSM--- 286
Cdd:PRK05846 248 L-LAGILLKMGAYGLLRFSLPLFPDashEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGnql 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 287 GYSGlAFFHLLTHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILeiV 366
Cdd:PRK05846 327 GIQG-AIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL--L 402
|
250 260 270
....*....|....*....|....*....|....*
gi 584593735 367 CLDWINFLIFILYFISTGLTASYSFRLFYYSMMGD 401
Cdd:PRK05846 403 GSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGP 437
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
47-359 |
3.46e-13 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 71.69 E-value: 3.46e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 47 TFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNEsNINRFVMIVLMF--IFSMVLLIISPNLISILLGWDGLGLVSYCLV- 123
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERR-GLLRGEFYALLLfaTLGMMLMASANDLLTLFLGLELLSLSLYVLVa 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 124 IYYQNVKSYNAGM----LTALSNRIgdvsILISIAWMLNF-GSWNYVNYYYFILDSFEMSII----TILInLAAMT-KSA 193
Cdd:COG1007 144 FRRDDRRSSEAALkyflLGALSSGF----LLYGISLLYGAtGSLNLAGIAAALAAGGANSPLlllgLVLV-LAGLAfKLS 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 194 QIPFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRFSPMLLINNYG-WFLLL--IGCMTMFMAGLGANFEFDLKKI 268
Cdd:COG1007 219 AVPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLVEAFPGLAAdWQLLLavLAVLSMTVGNLAALAQTNVKRM 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 269 IALSTLSQLG-LMMSILSMGYSGL--AFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSL 345
Cdd:COG1007 297 LAYSSIAHAGyLLLGLAAGTPLGVsaALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLL 376
|
330
....*....|....
gi 584593735 346 SLCGMPFLAGFYSK 359
Cdd:COG1007 377 SLAGIPPTAGFFGK 390
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
191-364 |
1.22e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 70.38 E-value: 1.22e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 191 KSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLLINNYGW-FLLLIGCMTMFMAGLGANFEFDLKKI 268
Cdd:PRK12665 222 KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDtLLMVVALLTMVVGILGAIAQSDIKRL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 269 IALSTLSQLGLMMSILSM----GYSGlAFFHLLTHALFKALLFMCAGsMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:PRK12665 301 LSFTLVSHIGYMVFGIALstvaGLSG-AIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPA 378
|
170 180
....*....|....*....|
gi 584593735 345 LSLCGMPFLAGFYSKDLILE 364
Cdd:PRK12665 379 LNLGGIPPFSGFIGKVALLE 398
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
172-363 |
2.45e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 66.11 E-value: 2.45e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 172 LDSFEMSIITILINLAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSpMLLINNYGW-----FLL 245
Cdd:PRK06458 208 LDPTLMKLAFVFLLIGFGTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYY-ILIDAAIGSdfpgrLLL 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 246 LIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGySGLAFF----HLLTHALFKALLFMCAGSMIHNlKDSQ 321
Cdd:PRK06458 286 IFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIG-GPLGIFaallHMLNHSLTKSAIFFASGNVLQK-YGTR 363
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 584593735 322 DIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK06458 364 DINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
177-363 |
3.42e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 65.55 E-value: 3.42e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 177 MSIITILINLAAmtKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLLINNYGW----FLLLIGCMT 251
Cdd:PRK08676 207 ASFLFIFIGFLA--KSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEqfsnVLIGLGIFS 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 252 MFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSGLAF---FHLLTHALFKALLFMCAGsMIHNLKDSQDIRFMGS 328
Cdd:PRK08676 284 IAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFD 362
|
170 180 190
....*....|....*....|....*....|....*
gi 584593735 329 IVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK08676 363 VFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-359 |
9.41e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 64.37 E-value: 9.41e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 49 IFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQN 128
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 129 VKSYNAGMLTALSNRIGDVSILISIAWMLNF-GSWNYVNYYYFILDSFEMSII---TILINLAAMTKSAQIPFSSWLPAA 204
Cdd:PRK12662 156 KKALVAAFEYLIIGTIGATFYLIGIGFLYAItGTLNMGDMFLIIQDLPTNRAIqigVLFIMVGLFIKAALFPFHKWLIQA 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 205 MAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNYGWFLLLIGCMTMFMAGLG-------ANFEFDLKKIIALSTLSQL 277
Cdd:PRK12662 236 YSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAALAivfgsvlAILSKDIKRIFAYSSISHI 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 278 GLMMSILSMG-YSGL--AFFHLLTHALFKALLFMCAGSMIHNLkDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLA 354
Cdd:PRK12662 316 GYIILAVSLNtYYGLaaAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTS 394
|
....*
gi 584593735 355 GFYSK 359
Cdd:PRK12662 395 GFVAK 399
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
47-359 |
1.76e-10 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 63.30 E-value: 1.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 47 TFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMfIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY- 125
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLEDRGRGEFYLLVLFA-LLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 126 YQNVKSYNAGM----LTALSNRIgdvsILISIAWMLNF-GSWNYVNYYYFILDSFEMSIItILINLAAMT-----KSAQI 195
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALASGF----LLYGMSLLYGAtGSLSFAGIAKALADGSGNSLL-LLFGLVFLLvglafKLSAV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 196 PFSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPMLLINNYGW---FLLLIGCMTMFMAGLGANFEFDLKKIIAL 271
Cdd:PRK05777 222 PFHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGLSEDwqqVLAIIAIASMLVGNLAALSQTNIKRLLAY 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 272 STLSQLG-LMMSILSMGYSGL--AFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLC 348
Cdd:PRK05777 301 SSIAHAGyLLVGLAAGTAEGYsaVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLA 380
|
330
....*....|.
gi 584593735 349 GMPFLAGFYSK 359
Cdd:PRK05777 381 GIPPTAGFWGK 391
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
191-358 |
2.17e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 53.50 E-value: 2.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 191 KSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLLINNYGWF---LLLIGCMTMFMAGLGANFEFDLK 266
Cdd:PRK12561 198 KLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVQMLPDAHVYFapaLAILGVVNIIYGALNAFAQDNVK 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 267 KIIALSTLSQLGLMM----SILSMGYSGlAFFHLLTHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNV 342
Cdd:PRK12561 277 RRLAYSSVSHMGFVLlgiaAFTDLGISG-AMLQMISHGLIAAALFFLTGVTYERTH-TLSIPNMGGLAKVMPKTFALFTA 354
|
170
....*....|....*.
gi 584593735 343 SSLSLCGMPFLAGFYS 358
Cdd:PRK12561 355 SSMASLALPGMSGFVS 370
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
47-359 |
4.42e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 52.70 E-value: 4.42e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 47 TFIFDWMSLIFMSFVMYISSLVIYYSNDYMHN-ESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:CHL00049 74 NFQTNNFNEIFQFLILLCSTLCIPLSVEYIECtEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGY 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 126 Y-QNVKSYNAGMLTALSNRIGDVSILISIAWM--LNFGSWNYVNYYYFILDSFEMSIITILINLAAMT-----KSAQIPF 197
Cdd:CHL00049 154 TkKDVRSNEATMKYLLMGGASSSILVYGFSWLygLSGGEIELQEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPF 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 198 SSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPML---LINNYGWFLLLIGCMTMFMAGLGANFEFDLKKIIALST 273
Cdd:CHL00049 234 HQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPfyfSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 274 LSQLGLMMSILSMGYSGLAFFHLLTHALFkaLLFMCAGS----MIHNLKDSQD-IRFMGSIVNFMPLTSVCFNVSSLSLC 348
Cdd:CHL00049 313 IGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLG 390
|
330
....*....|.
gi 584593735 349 GMPFLAGFYSK 359
Cdd:CHL00049 391 GIPPLAGFFGK 401
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
57-384 |
6.04e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 52.49 E-value: 6.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 57 FMSFVMYISSLVIYYSNDYMHNESNINRFVMIVLMF-IFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNvKSYNAG 135
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLSSLYILtILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 136 MLTALSNrigdvsilISIAWMLNFGSWNYVNYYYFILDSFEMSIITILINLAAMTKSAQIPF--SSWLPAAMAAPTPVSA 213
Cdd:PRK06459 124 VFMAFGE--------LSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGNAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 214 LVHSSTLVTAGVYLLIR---FSPMLLINNYGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSM---- 286
Cdd:PRK06459 196 AILSATMTLMGVYGILKmtiLTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymvt 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 287 --GYSGLAFFHLLT-------HALFKALLFMCAGSMihnlkDSQDIRFMGSIVNFMplTSVCFNVSSLSLCGMPFLAGFY 357
Cdd:PRK06459 276 kqLITSIEHFSLITvilysfaHSVAKTGLFLSSGLQ-----EKQSITYSKKIRNRW--IELGLTLLASSLSGLLPNIGGV 348
|
330 340
....*....|....*....|....*...
gi 584593735 358 SKDLILEIVCLDWINFLIFI-LYFISTG 384
Cdd:PRK06459 349 ASWLLLESLFMFAYVLHNVIsILFIVTG 376
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
23-440 |
1.33e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 51.27 E-value: 1.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 23 YLMFDYSVFIEWELFSLNSSMVVmtFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNEsninrfVMIVLMFIFSMVLLIIS 102
Cdd:PRK12664 11 YGFFFGLIFIVLPLLLYDWSEPV--YNLDLVLFIVLSFSLALIFLYILPIKNMRFSE------MLCYLLYYISSIAAISS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 103 PNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVSILISIAWMLNFGSWNYVNYYYFILDsfemsiitI 182
Cdd:PRK12664 83 SSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYTGYCKLLFMLG--------L 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 183 LINLAAMtksaqiPFSSWLPAAMAAPTPVSALVHSstLVTAGVYLLIrfspMLLINNYGWFLLLIGCMTMFMAGLGANFE 262
Cdd:PRK12664 155 LINCACF------PASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILLFLGIITAIYGIIFASLE 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 263 FDLKKIIALSTLSQLGLMMSILSMGYS-----GLAFFHLLTHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNfMPLTS 337
Cdd:PRK12664 223 QNIRRLLCYNVVGQMGLLIIAIGFSGSsgvaiGILILQIVLSVVYQTLLFMVADSVINRTR-KFNLNRVGGLFK-MSLEA 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 338 VCFNVSSLSLCGMPFLAGFYSKDLIL-EIVCLDWINFLIFILYFI-STGLTASYSFRLFYYSMMGDNNFYPSYffdDNSY 415
Cdd:PRK12664 301 MCCIIAILNMGAFPGTAGFVSKSLIThSIDTAGLTLVLYKKLFLIcSLLLFASVGLKFFWYAFISKSKSKPEA---EKVY 377
|
410 420
....*....|....*....|....*.
gi 584593735 416 FIS-FGMIGLLFVAVFGGSFLSWLIF 440
Cdd:PRK12664 378 IGSkLSMIILVLICVVLGMFNSYLLF 403
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-363 |
1.38e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 51.00 E-value: 1.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 186 LAAMTKSAQIPFSSWLPAA-MAAPTPVSALVHSSTLVtaGVYLLIRFSPMLL------INNYGWFLLLIGCM-TMFMAGL 257
Cdd:PRK12666 218 VVFLIKAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLFgpeagaSAGFGQDWLLPGGLaTLAFGAI 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 258 GANFEFDLKKIIALSTLSQLGLMMSILSMGYSGL---AFFHLLTHALFKALLFMCAGSM----------------IHNLK 318
Cdd:PRK12666 296 GVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerqrgaaadrlavtpeLYDLD 375
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 584593735 319 DSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK12666 376 EEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALL 420
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
46-364 |
1.75e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 50.80 E-value: 1.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 46 MTFIFDWMSLIFMSFVMYISSLVIYysnDYMHNESNINRFVMIVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK06277 66 ITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIA 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 126 YQNVKSYNAGMLTALSNRIGDVSILISIAWMLNF-GSWNYVNYYYFILDSFEMSIITI---LINLAAMTKSAQIPFSSWL 201
Cdd:PRK06277 143 SGTEEAYKAALKYMILGNVAGSILLLGIGFLLAStGTLNITDIHNALLVNPTSPVIYGgllLLIFGLLYGSGLPPFHTIK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 202 PAAMAAPTP-VSALVHSS---TLVTAGVYLLIRFSPMLLINNYGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK06277 223 SDIYAKAKPfGSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQG 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 278 GLMMSILSMGYS---GLAFFHLLTHALFKALLFMCAGSmIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLA 354
Cdd:PRK06277 303 GYVAAGLALGTPlgiVAGIFHAINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFN 381
|
330
....*....|
gi 584593735 355 GFYSKDLILE 364
Cdd:PRK06277 382 GFQSKLMLAQ 391
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
181-364 |
4.54e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 49.05 E-value: 4.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 181 TILINLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINnygwFLLLIGCMTMFMAGLGAN 260
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT----LLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 261 FEFDLKKIIALSTLSQLGLMMSILSMGYSgLAFFHLLTHALFKALLFMcagsMIHNLKdSQDIRFMGSIVNFMPLTSVCF 340
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYSPK-LTLLTFYIYILMTTPMFL----TLNTTS-TKTLKDMMTSWTKSPTLNTTL 244
|
170 180
....*....|....*....|....
gi 584593735 341 NVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILQ 268
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
195-389 |
1.54e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 47.77 E-value: 1.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 195 IPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSPMLLINNYGWF---LLLIGCMTMFMAGLGANFEFDLKKIIA 270
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEAWVYLapwLATWAVVSVLYGASCAIAQKDMKKMVA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 271 LSTLSQLG--LMMSILSMGYSGL-AFFHLLTHALFKALLFMCAGsMIHNLKDSQDIRFMGSIVN---FMPLTSVCFNVSS 344
Cdd:PRK06473 301 YSSIGHMGyiLLAAAAATPLSILaAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLNperGLPITGSLMILGV 379
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 584593735 345 LSLCGMPFLAGFYSKDLILEivcldwINFLIF----ILYFISTGLTASY 389
Cdd:PRK06473 380 MASAGIPGMVGFIAEFLVFR------GSFPIFpvqtLLCMIGTGLTAVY 422
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
151-397 |
3.57e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 46.12 E-value: 3.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 151 ISIAWMLNFGSWNYVNYYYFILDSFEMSIITILINLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 230
Cdd:MTH00200 65 TASALLLFGGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQ 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 231 FSPMLlinnYGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGySGLAFFHLLTHALFKALLFmca 310
Cdd:MTH00200 145 LAPAL----NSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLYVIITLTVF--- 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 311 gsMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILeivcldwINFLIFILYFISTGLTASYS 390
Cdd:MTH00200 217 --LLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-------QELSKQGLFIYATILLLGSL 287
|
....*..
gi 584593735 391 FRLFYYS 397
Cdd:MTH00200 288 LSLFFYL 294
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
169-440 |
3.91e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 45.97 E-value: 3.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 169 YFILDSFEMSIITILINLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSStlvtagvylLIRFSPMLLI--NNYGWFLLL 246
Cdd:MTH00160 78 NMLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMT---------WQKIAPLILLsyLINNNFIII 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 247 IGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFM 326
Cdd:MTH00160 149 IIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNK 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 327 GSIVNFMpltsvcFNVSSLSLCGMPFLAGFYSKDLILEIVCLDWINFLIFILyFISTGLTASYSFRLFYYSMMGdNNFYP 406
Cdd:MTH00160 229 SKKIKFL------LFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFIL-IMSSLITLYFYLRISYSSLML-NYNKN 300
|
250 260 270
....*....|....*....|....*....|....
gi 584593735 407 SYFFDDNSYFISFGMIGLLFVAVFGGSFLSWLIF 440
Cdd:MTH00160 301 KWNLKKKKNKFSLILNFLSFISLFGLILSSLLFL 334
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
195-358 |
4.77e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 46.24 E-value: 4.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 195 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNYGWF---LLLIGCMTMFMAGLGANFEFDLKKIIAL 271
Cdd:PRK02546 230 VPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFaplLIVLGVVNIIYAALTSFAQRNLKRKIAY 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 272 STLSQLGLMM----SILSMGYSGlAFFHLLTHALFKALLFMCAGSM---IHNLKDSQdirfMGSIVNFMPLTSVCFNVSS 344
Cdd:PRK02546 310 SSISHMGFVLigigSFTDLGTSG-AMLQMISHGLIGASLFFLVGATydrTHTLMLDE----MGGVGQKMRKMFAMWTACS 384
|
170
....*....|....
gi 584593735 345 LSLCGMPFLAGFYS 358
Cdd:PRK02546 385 LASLALPGMSGFVA 398
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
46-85 |
1.57e-04 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 39.33 E-value: 1.57e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 584593735 46 MTFIFDWMSLIFMSFVMYISSLVIYYSNDYMHNESNINRF 85
Cdd:pfam00662 11 FGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
179-389 |
1.72e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 44.32 E-value: 1.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 179 IITILINLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNYGWF---LLLIGCMTMFMA 255
Cdd:PRK07363 206 ILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVapgLAIIGTISVIYG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 256 GLGANFEFDLKKIIALSTLSQLG--LMMSILSMGYSGL-AFFHLLTHALFKALLFMCAGsMIHNLKDSQDIRFMGSIVN- 331
Cdd:PRK07363 286 ALSAIAQKDIKRMVAYSSIGHMGyiLVAAAAGTQLSLLgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMNp 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 584593735 332 --FMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEivcldwINFLIF----ILYFISTGLTASY 389
Cdd:PRK07363 365 irGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ------GSFSTFpiptLLCIVASGLTAVY 422
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
91-363 |
6.64e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 42.32 E-value: 6.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 91 MFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQN-VKSYNAGMLTALSNRIGDVSILISIAWMLNFGSWNYVNYYY 169
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGsGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 170 FILD------SFEMSIITILINLAAMTKSAQIPFSSWLPAAM-AAPTPVSALVhsSTLVTAGVyllirFSPMLLINNYGW 242
Cdd:MTH00196 81 LVLNsgqsfsSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYeGAPTKTTALL--AIVPKLGI-----FSILVSIGLNVN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 243 FLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGySGLAFFHLLTHALFKALLFMCAGSMIHNLKDSQD 322
Cdd:MTH00196 154 ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIG-SFESIQASLVYLFIYIIMSICVFSIILALNVYKN 232
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 584593735 323 --IRFMGsIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:MTH00196 233 liIEFSG-LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
184-391 |
1.81e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.06 E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 184 INLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS-PMLLI--NNYGWFLLLIGCMTMFMAGLGAN 260
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSwPILPLgaQNLAPAVIAMGIVGIVYGSFATC 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 261 FEFDLKKIIALSTLSQLGLM-MSILSMGYSGL--AFFHLLTHALFKALLFMCAgSMIHNLKDSQDIRFMGSIVNFMPLTS 337
Cdd:MTH00226 316 RQIDVKRLVAYSSVAHMGLVsITLVTHDIIGLtgSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWG 394
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 584593735 338 VCFNVSSLSLCGMPFLAGFYSKDLILeivcLDWINFLIFILYFISTG--LTASYSF 391
Cdd:MTH00226 395 TIMIVTSLANVAVPPSGNFIGEYLSI----LSSFNWNPIIGVFVCSGviLSAVYSF 446
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
174-364 |
1.88e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 40.67 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 174 SFEMSIITILINLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINnygwFLLLIGCMTMF 253
Cdd:MTH00070 88 NMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN----LLIIMGLLSTL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 254 MAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSgLAFFHLLTHALFKALLFMcagsMIHNLKDSQDIRFMGSIVNFM 333
Cdd:MTH00070 164 IGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPH-LTLLNLLIYLIMTSSMFL----MLMNLNSTNINKLSSSWSKNP 238
|
170 180 190
....*....|....*....|....*....|.
gi 584593735 334 PLTSVCFnVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:MTH00070 239 TLTSMMM-LTLLSLGGLPPTTGFIPKWLILQ 268
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
144-394 |
2.25e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 40.81 E-value: 2.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 144 IGDVSILISIAWMLNF-GSWNYVNYYYFILDSFEMSIITILINLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVT 222
Cdd:MTH00217 171 IGSVFMLLGIFTLYSYaGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLK 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 223 AGVYLLIRFSPMLLINNYGWFLLLIGCMTMFM---AGLGANFEFDLKKIIALSTLSQLGLM-MSILSMGYSGL--AFFHL 296
Cdd:MTH00217 251 LGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAiiyGSLTTCRQVDLKRIIAYSSVAHMGLVtLGIFSHTIQGLvaAIFLM 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 297 LTHALFKALLFMcAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKdlILEIVCLDWINFLIF 376
Cdd:MTH00217 331 LAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGE--FLSLLAAFEYSYIVG 407
|
250
....*....|....*...
gi 584593735 377 ILYFISTGLTASYSFRLF 394
Cdd:MTH00217 408 VLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
191-447 |
3.43e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 40.05 E-value: 3.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNYGWF---LLLIGCMTMFMAGLGANFEFDLKK 267
Cdd:MTH00204 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFaplIVMLSVIAVIYGSLTTCRQVDFKR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 268 IIALSTLSQLGLM-MSILSMGYSGL--AFFHLLTHALFKALLFMcAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:MTH00204 302 LIAYSSVAHMGLVpLGLFTHTIEGLvaAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLS 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 345 LSLCGMPFLAGFYSKDLILeivcLDWINFLIFILYFISTG--LTASYSFRLFYYSMMGDNNFYPSYFFDDNSYFIsFGMI 422
Cdd:MTH00204 381 LANMGFPLSCNFVGEFFSL----LAAFEYSLGLGVLVTSGmvWSAAYSLYLYNRISFGGGSNYLLFSRDLNRREL-LAIL 455
|
250 260
....*....|....*....|....*
gi 584593735 423 GLLFVAVFGGSFLSWLIFPIPYMIV 447
Cdd:MTH00204 456 PLIIAIFLLGIVPFIIIDLVKNSLV 480
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
174-404 |
5.48e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 39.38 E-value: 5.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 174 SFEMSIITILINLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINnygwFLLLIGCMTMF 253
Cdd:MTH00011 84 SLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILP----MMTSMAAMSAL 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 254 MAGLGANFEFDLKKIIALSTLSQLGlMMSILSMGYSGLAFFHLLTHALFKALLFMCAGSMihnlkDSQDIRFMGSIVNFM 333
Cdd:MTH00011 160 AGGLGGMNQTQLRPLLAYSSIGHMG-WMTMISVFSPSMAILYFMTYIIITTPLMLLFAYL-----NAFSTKFNSKISSMS 233
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 584593735 334 PLTSVCFNVSSLSLCGMPFLAGFYSKDLILEIVcLDWINFLIFILYFISTGLTASYSFRLFYYSMMGDNNF 404
Cdd:MTH00011 234 QTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETL-TSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTF 303
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
191-411 |
6.48e-03 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 39.16 E-value: 6.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLINNYGWF---LLLIGCMTMFMAGLGANFEFDLKK 267
Cdd:CHL00011 224 KLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFspwLVIVGAIQIIYAASTSLGQRNLKK 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 268 IIALSTLSQLGLMM----SILSMGYSGlAFFHLLTHALFKALLFMCAGSmihnlkdSQD-IRF-----MGSIVNFMPLTS 337
Cdd:CHL00011 304 RIAYSSVSHMGFIIigigSITDTGLNG-AILQIISHGFIGAALFFLAGT-------SYDrIRLvyldeMGGIAIPMPKIF 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584593735 338 VCFNVSSLSLCGMPFLAGFYSKDLI-LEIVCLD--WINFLIFILYFISTG--LTASYSF----RLFYYSMMGdnNFYPSY 408
Cdd:CHL00011 376 TMFSSFSMASLALPGMSGFVAELIVfFGIITSQkyLLMPKILITFVMAIGmiLTPIYLLsmlrQMFYGYKLF--NVPNSY 453
|
...
gi 584593735 409 FFD 411
Cdd:CHL00011 454 FFD 456
|
|
| |
