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Conserved domains on  [gi|745999857|ref|YP_009114663|]
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NADH dehydrogenase subunit 5 (mitochondrion) [Megaladapis edwardsi]

Protein Classification

NADH dehydrogenase subunit 5( domain architecture ID 11475900)

NADH dehydrogenase subunit 5 (ND5/NADH5) is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain; the immediate electron acceptor for the enzyme is believed to be ubiquinone

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-602 0e+00

NADH dehydrogenase subunit 5; Provisional


:

Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1126.48  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857   1 MNLFSSFTLITLIILTLPIVTNMMNTHKNHYYAYYVQSSIAYAFTTSLIPSTLFIFSGQEMIISNWHWMTIQTMKLTLSF 80
Cdd:MTH00108   1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  81 KLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108  81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 161 RADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLFILNYDPNLIPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00108 161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 241 TPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
Cdd:MTH00108 241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 321 QPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESAS 400
Cdd:MTH00108 321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 401 TSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPTLTYINENNPLLINSIKRLMFGSLFAGFFMYNNIPPMNIPQL 480
Cdd:MTH00108 401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 481 TMPLYLKITALAVTIMGFMLAMELNLLTSNLKLKMTSHMFKFSNSLGFYPAILHRLTPQFKLSMDQNTASLLLDLAWLEK 560
Cdd:MTH00108 481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
                        570       580       590       600
                 ....*....|....*....|....*....|....*....|..
gi 745999857 561 TMPKSTTHIQMLSSTIVSNQKGLIKLYFLSFLASIILTLLLI 602
Cdd:MTH00108 561 ILPKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLLLF 602
 
Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-602 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1126.48  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857   1 MNLFSSFTLITLIILTLPIVTNMMNTHKNHYYAYYVQSSIAYAFTTSLIPSTLFIFSGQEMIISNWHWMTIQTMKLTLSF 80
Cdd:MTH00108   1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  81 KLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108  81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 161 RADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLFILNYDPNLIPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00108 161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 241 TPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
Cdd:MTH00108 241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 321 QPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESAS 400
Cdd:MTH00108 321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 401 TSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPTLTYINENNPLLINSIKRLMFGSLFAGFFMYNNIPPMNIPQL 480
Cdd:MTH00108 401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 481 TMPLYLKITALAVTIMGFMLAMELNLLTSNLKLKMTSHMFKFSNSLGFYPAILHRLTPQFKLSMDQNTASLLLDLAWLEK 560
Cdd:MTH00108 481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
                        570       580       590       600
                 ....*....|....*....|....*....|....*....|..
gi 745999857 561 TMPKSTTHIQMLSSTIVSNQKGLIKLYFLSFLASIILTLLLI 602
Cdd:MTH00108 561 ILPKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLLLF 602
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
51-501 2.09e-144

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 431.11  E-value: 2.09e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  51 STLFIFSGQEMIISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLI 130
Cdd:COG1009   47 LLFPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLG 126
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 131 LVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLFI---LNYD 207
Cdd:COG1009  127 LVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAaapTILS 206
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 208 PNLIPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITT 285
Cdd:COG1009  207 SPLLTLILLLLllGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITA 286
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 286 LFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLnNEQDIRKMGGLFKA 365
Cdd:COG1009  287 LFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKK 365
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 366 MPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIATS-MTAIYSTRIIFYTLLNQPRFPTLTYIN 444
Cdd:COG1009  366 MPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAfLTAFYSFRLFFLVFFGKPRPKTPKHPH 445
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 745999857 445 ENNPLLINSIKRLMFGSLFAGFFMYNN----IPPMNIPQLTMPLY----LKITALAVTIMGFMLA 501
Cdd:COG1009  446 ESPWLMTLPLVVLAVLSLVLGLLLPGLleglLAPAAVLGGELHLAhgllLNALPLLLSLLGIALG 510
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
38-514 2.25e-129

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 392.80  E-value: 2.25e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857   38 SSIAYAFTTSLIPSTLFIFSGQEMIISN--WHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIN 115
Cdd:TIGR01974  35 GSVGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYS 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  116 QFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNT 195
Cdd:TIGR01974 115 RFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGT 194
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  196 WDLQQLFIL--NYDPNLIPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKK 271
Cdd:TIGR01974 195 LNFQEVFALapGAFFSALTLICLLLfiGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSP 274
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  272 IIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLN 351
Cdd:TIGR01974 275 TALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH 354
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  352 NEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIATSMTAIYSTRIIFYTL 431
Cdd:TIGR01974 355 HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVF 434
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  432 LNQPRFPTLTYINENNPLLINSIKRLMFGSLFAGFFMYNNIPPMN--IPQLT--------MPLYLKITALAVTIMGFMLA 501
Cdd:TIGR01974 435 HGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKgvLPTSAepalehhhVPALEIWSPTAVAILGILLA 514
                         490
                  ....*....|...
gi 745999857  502 MELNLLTSNLKLK 514
Cdd:TIGR01974 515 YLLYLGNPTLPAK 527
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
134-416 2.83e-52

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 180.97  E-value: 2.83e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  134 ANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQL-----FILNYDP 208
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  209 NLIPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFYPLMENKKIIMS-MALCLGAITTL 286
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIQqILLILAIISML 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  287 FTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPH---LAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLF 363
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 745999857  364 KAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNaWALTITLIAT 416
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWI-FLVLAGVVGS 291
 
Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-602 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1126.48  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857   1 MNLFSSFTLITLIILTLPIVTNMMNTHKNHYYAYYVQSSIAYAFTTSLIPSTLFIFSGQEMIISNWHWMTIQTMKLTLSF 80
Cdd:MTH00108   1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  81 KLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108  81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 161 RADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLFILNYDPNLIPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00108 161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 241 TPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
Cdd:MTH00108 241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 321 QPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESAS 400
Cdd:MTH00108 321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 401 TSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPTLTYINENNPLLINSIKRLMFGSLFAGFFMYNNIPPMNIPQL 480
Cdd:MTH00108 401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 481 TMPLYLKITALAVTIMGFMLAMELNLLTSNLKLKMTSHMFKFSNSLGFYPAILHRLTPQFKLSMDQNTASLLLDLAWLEK 560
Cdd:MTH00108 481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
                        570       580       590       600
                 ....*....|....*....|....*....|....*....|..
gi 745999857 561 TMPKSTTHIQMLSSTIVSNQKGLIKLYFLSFLASIILTLLLI 602
Cdd:MTH00108 561 ILPKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLLLF 602
ND5 MTH00137
NADH dehydrogenase subunit 5; Provisional
18-603 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214428 [Multi-domain]  Cd Length: 611  Bit Score: 926.16  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  18 PIVTNMMNTHKNHYYA-YYVQSSIAYAFTTSLIPSTLFIFSGQEMIISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFV 96
Cdd:MTH00137  21 PLLTTLSPNPQKPNWAlTHVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFKFDHYSIIFTPIALYV 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  97 TWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNR 176
Cdd:MTH00137 101 TWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNR 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 177 IGDIGFILTMAWFLMYSNTWDLQQLFILNYDPNL-IPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVA 255
Cdd:MTH00137 181 VGDIGLILAMAWMATNLNSWEIQQIFALSKDFDLtLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVA 260
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 256 GIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFF 335
Cdd:MTH00137 261 GIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFF 340
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 336 KAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIA 415
Cdd:MTH00137 341 KAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIA 420
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 416 TSMTAIYSTRIIFYTLLNQPRFPTLTYINENNPLLINSIKRLMFGSLFAGFFMYNNIPPMNIPQLTMPLYLKITALAVTI 495
Cdd:MTH00137 421 TSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTPVMTMPPLLKLAALIVTI 500
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 496 MGFMLAMELNLLTSN-LKLKMTSHMFKFSNSLGFYPAILHRLTPQFKLSMDQNTASLLLDLAWLEKTMPKSTTHIQMLSS 574
Cdd:MTH00137 501 LGLLIALELASLTNKqFKPTPTLPPHHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTWLEKTGPKGIASLQLPLI 580
                        570       580       590
                 ....*....|....*....|....*....|
gi 745999857 575 TIVSN-QKGLIKLYFLSFLASIILTLLLIM 603
Cdd:MTH00137 581 TTTSNiQQGMIKTYLTLFLLTLALATLLLL 610
ND5 MTH00004
NADH dehydrogenase subunit 5; Validated
43-602 0e+00

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 214398 [Multi-domain]  Cd Length: 602  Bit Score: 860.62  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  43 AFTTSLIPSTLFIFSGQEMIISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLL 122
Cdd:MTH00004  43 AFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLL 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 123 LFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLF 202
Cdd:MTH00004 123 IFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLF 202
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 203 IlNYDPNLIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGA 282
Cdd:MTH00004 203 S-PTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGA 281
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 283 ITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGL 362
Cdd:MTH00004 282 LTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGL 361
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 363 FKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPTLTY 442
Cdd:MTH00004 362 QKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTP 441
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 443 INENNPLLINSIKRLMFGSLFAGFFMYNNIPPMNIPQLTMPLYLKITALAVTIMGFMLAMELNLLTSNLKLKMTSHMFKF 522
Cdd:MTH00004 442 INENTPTIINPITRLALGSILAGLLISSTILPTKTPPMTMPTTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHNF 521
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 523 SNSLGFYPAILHRLTPQFKLSMDQNTASLLLDLAWLEKTMPKSTTHIQMLSSTIVSN-QKGLIKLYFLSFLASIILTLLL 601
Cdd:MTH00004 522 SNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMGPKGLANLQLTASKTLTTlQKGLIKNYLTSFALTILLLLLL 601

                 .
gi 745999857 602 I 602
Cdd:MTH00004 602 T 602
ND5 MTH00066
NADH dehydrogenase subunit 5; Provisional
1-602 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214416 [Multi-domain]  Cd Length: 598  Bit Score: 836.87  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857   1 MNL---FSSFTLITLIILTLPIVTNMMNTHknhyyAYYVQSSIAYAFTTSLIPSTLFIFSGQEMIISNWHWMTIQTMKLT 77
Cdd:MTH00066   1 MNLmliFNSSMILSLLLLILPLLLPKSNNF-----HTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNIN 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  78 LSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGW 157
Cdd:MTH00066  76 SSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGW 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 158 WYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLFILNyDPNLIPLMGLLLAATGKSAQFGLHPWLPSAM 237
Cdd:MTH00066 156 WHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLN-DNSTLPLLGLILAAAGKSAQFGLHPWLPAAM 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 238 EGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTI 317
Cdd:MTH00066 235 EGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTI 314
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 318 GINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIE 397
Cdd:MTH00066 315 GLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIE 394
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 398 SASTSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPTLTYINENNPLLINSIKRLMFGSLFAGFFMYNNIPPMNI 477
Cdd:MTH00066 395 AMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKP 474
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 478 PQLTMPLYLKITALAVTIMGFMLAMELNLLTSnlKLKMTSHMFKFSNSLGFYPAILHRLTPQFKLSMDQNTASLLLDLAW 557
Cdd:MTH00066 475 QILTMPTFMKLAALLVTLLGLLIALDLAKITS--KTTPKTKMHSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTW 552
                        570       580       590       600
                 ....*....|....*....|....*....|....*....|....*.
gi 745999857 558 LEKTMPKSTTHIQMLSSTIVSN-QKGLIKLYFLSFLASIILTLLLI 602
Cdd:MTH00066 553 YEKSGPKGLTNQQLPPIKTITNiQTGLIKTYLTLFLITLLLMLILL 598
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
1-603 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 673.97  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857   1 MNLFSSFTLITLIILTLPIVTNMMNTHKNHYyayyvqSSIAYAFTTSLIPSTLFIFSGQEMIISNWHWMTIQTMKLTLSF 80
Cdd:MTH00211   2 NTIFNSGFLLILILLLLPLLLPLNNSKLHIK------KAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSF 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  81 KLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00211  76 KFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYG 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 161 RADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLFILnYDPNLIPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00211 156 RSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFIL-NLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGP 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 241 TPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
Cdd:MTH00211 235 TPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLN 314
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 321 QPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESAS 400
Cdd:MTH00211 315 QPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMN 394
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 401 TSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPTLTYINENNPLLINSIKRLMFGSLFAGFFMYNNIPPMNIPQL 480
Cdd:MTH00211 395 GSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEIL 474
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 481 TMPLYLKITALAVTIMGFMLAMELNLLTsNLKLKMTSHMfkFSNSLGFYPAILHRLTPQFKLSMDQNTASLLLDLAWLEK 560
Cdd:MTH00211 475 SLPFLLKLMPLLVTIVGLLLGLELVNLT-HKQLKTSTLS--FSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEK 551
                        570       580       590       600
                 ....*....|....*....|....*....|....*....|....
gi 745999857 561 TMPKSTTHIQMLSSTIVSN-QKGLIKLYFLSFLASIILTLLLIM 603
Cdd:MTH00211 552 LGPKGLGVNQKKLIKLVTSpQQGLIKSYLALLLLSLLLILLLFL 595
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
47-603 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 564.21  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  47 SLIPSTLFI-FSGQEMIISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFL 125
Cdd:MTH00208  69 SLINLLIWIlLGCPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFL 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 126 ITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLFILN 205
Cdd:MTH00208 149 LNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSLN 228
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 206 YDPNL---IPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGA 282
Cdd:MTH00208 229 NSNSFlinILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGS 308
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 283 ITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGL 362
Cdd:MTH00208 309 LTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGL 388
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 363 FKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPTLTY 442
Cdd:MTH00208 389 SFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSP 468
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 443 INENNPLLINSIKRLMFGSLFAGFFMYNNIppMNIPQLTMPLYLKITALAVTIMGFMLAMELnLLTSNLKLKMTSHMFKF 522
Cdd:MTH00208 469 ISEENPNLTNPLLRLAIGTIISGWFFSNFV--FNLPPLTLPLILKSLPLIVTIIGAAFSFSF-LLSLSSNPINSNFFSFL 545
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 523 SNSLgFYPAILHRLTPQFKLSMDQNTASLLLDLAWLEKTMPKSTTH-IQMLSSTIVSNQKGLIKLYFLSFLASIILTLLL 601
Cdd:MTH00208 546 SNQW-FFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNtSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILTL 624

                 ..
gi 745999857 602 IM 603
Cdd:MTH00208 625 SL 626
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
51-501 2.09e-144

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 431.11  E-value: 2.09e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  51 STLFIFSGQEMIISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLI 130
Cdd:COG1009   47 LLFPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLG 126
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 131 LVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLFI---LNYD 207
Cdd:COG1009  127 LVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAaapTILS 206
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 208 PNLIPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITT 285
Cdd:COG1009  207 SPLLTLILLLLllGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITA 286
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 286 LFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLnNEQDIRKMGGLFKA 365
Cdd:COG1009  287 LFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKK 365
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 366 MPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIATS-MTAIYSTRIIFYTLLNQPRFPTLTYIN 444
Cdd:COG1009  366 MPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAfLTAFYSFRLFFLVFFGKPRPKTPKHPH 445
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 745999857 445 ENNPLLINSIKRLMFGSLFAGFFMYNN----IPPMNIPQLTMPLY----LKITALAVTIMGFMLA 501
Cdd:COG1009  446 ESPWLMTLPLVVLAVLSLVLGLLLPGLleglLAPAAVLGGELHLAhgllLNALPLLLSLLGIALG 510
PRK06590 PRK06590
NADH:ubiquinone oxidoreductase subunit L; Reviewed
39-501 5.44e-134

NADH:ubiquinone oxidoreductase subunit L; Reviewed


Pssm-ID: 235836 [Multi-domain]  Cd Length: 624  Bit Score: 404.93  E-value: 5.44e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  39 SIAYAFTTSLIPSTLFIFSGQEMI-ISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQF 117
Cdd:PRK06590  38 LVGLSALLSLVVFFDFLLGGGRAFsQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRF 117
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 118 FKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMawFLMYSN--T 195
Cdd:PRK06590 118 FAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGI--FLLFAEfgS 195
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 196 WDLQQLFI-----LNYDPNLIPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLME 268
Cdd:PRK06590 196 LNYDEVFAaapqfFGLGWSALTLICLLLfiGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFE 275
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 269 NKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIH 348
Cdd:PRK06590 276 LSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIH 355
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 349 NLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESAsTSNTNAWALTITLIATSMTAIYSTRIIF 428
Cdd:PRK06590 356 AMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAA-FANGHINLFVAGLVGAFLTAFYSFRLIF 434
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 429 YTLLNQPR----FPTLTYINENNPLLInsikrLMFGSLFAGFFMYNNI---------PPMNIPQLTMPLYLKITALAVTI 495
Cdd:PRK06590 435 LVFHGKEKekihHPHESPAVMTLPLIV-----LAVLSVFAGALIVPPFlgvlpltteLAHGEAEHHLPVWVALLPLVVAL 509

                 ....*.
gi 745999857 496 MGFMLA 501
Cdd:PRK06590 510 AGIALA 515
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
38-514 2.25e-129

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 392.80  E-value: 2.25e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857   38 SSIAYAFTTSLIPSTLFIFSGQEMIISN--WHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIN 115
Cdd:TIGR01974  35 GSVGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYS 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  116 QFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNT 195
Cdd:TIGR01974 115 RFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGT 194
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  196 WDLQQLFIL--NYDPNLIPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKK 271
Cdd:TIGR01974 195 LNFQEVFALapGAFFSALTLICLLLfiGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSP 274
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  272 IIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLN 351
Cdd:TIGR01974 275 TALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH 354
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  352 NEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIATSMTAIYSTRIIFYTL 431
Cdd:TIGR01974 355 HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVF 434
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  432 LNQPRFPTLTYINENNPLLINSIKRLMFGSLFAGFFMYNNIPPMN--IPQLT--------MPLYLKITALAVTIMGFMLA 501
Cdd:TIGR01974 435 HGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKgvLPTSAepalehhhVPALEIWSPTAVAILGILLA 514
                         490
                  ....*....|...
gi 745999857  502 MELNLLTSNLKLK 514
Cdd:TIGR01974 515 YLLYLGNPTLPAK 527
ND5 MTH00151
NADH dehydrogenase subunit 5; Provisional
42-603 4.24e-114

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214436 [Multi-domain]  Cd Length: 565  Bit Score: 351.84  E-value: 4.24e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  42 YAFTTSLIPSTLFIFSGQEMIISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYL 121
Cdd:MTH00151  12 FSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLV 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 122 LLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDiGFILTMAWFLMYSNTWdlqqL 201
Cdd:MTH00151  92 MLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALV-IYYQNKKSLSAGMLTALTNRIGD-VLILLSIALLVLLGHW----S 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 202 FILNYDPNLIPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALC 279
Cdd:MTH00151 166 ILSMWDFKLSGWLGLLLvlAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLF 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 280 LGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKM 359
Cdd:MTH00151 246 ISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLL 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 360 GGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPT 439
Cdd:MTH00151 326 GSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSS 405
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 440 LTYINENNPLLINSIKRLMFGSLFAGFFMYNNIPPMNIPqLTMPLYLKITALAVTIMGFMLAMeLNLLTSNLKLKMTSHM 519
Cdd:MTH00151 406 LSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEE-FFLPSYLKLLIGFVILLGLFLSF-GFWDSGFSSSKMVKLS 483
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 520 FKFSNSLGFYPAILHRLTPQFKLSmdQNTASLLLDLAWLEKTMPKSTthIQMLSSTIVSNQKGLIKLYFLSFLASIILTL 599
Cdd:MTH00151 484 FFFSSMWFLSPLSSQPLKSLSLKL--SNSSMKSLDMGWLEILGGQGV--FKANKSFSVLNESWPVKWFNFFIGLILLLVL 559

                 ....
gi 745999857 600 LLIM 603
Cdd:MTH00151 560 FLVV 563
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
55-504 1.64e-110

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 343.98  E-value: 1.64e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  55 IFSGQEMIISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTA 134
Cdd:MTH00020  51 LFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTS 130
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 135 NNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLFIL----NYDPNL 210
Cdd:MTH00020 131 DNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMvvsaPSSDIT 210
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 211 IPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAI 290
Cdd:MTH00020 211 LICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAAT 290
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 291 CALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTS 370
Cdd:MTH00020 291 VGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTY 370
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 371 SSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQP--RFPTLTYINENNP 448
Cdd:MTH00020 371 IFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTnlKKAVFFHLHEGDW 450
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 745999857 449 LLINSIKRLMFGSLFAGFFMYNNIPPMNI-PQLTMPLYLKITALAVTIMGFMLAMEL 504
Cdd:MTH00020 451 NLLLPLGILALGSIFVGYLAKEMIWSFQItLPPIVPLSIKLLPVFLSLGGIGLVIIL 507
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
44-603 3.17e-110

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 342.12  E-value: 3.17e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  44 FTTSLIPSTLFIFSGQEMIIsNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLL 123
Cdd:MTH00165  15 SLILFFLGLYFLLNDYSLFI-EWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLL 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 124 FLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYsNTWDL--QQL 201
Cdd:MTH00165  94 FVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNF-GSWNFifYLD 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 202 FILNYDPNLIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKkIIMSMALCLG 281
Cdd:MTH00165 172 FMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS-FFSKFLLLIS 250
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 282 AITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGG 361
Cdd:MTH00165 251 LLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGG 330
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 362 LFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPTLT 441
Cdd:MTH00165 331 LSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLN 410
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 442 YINENNPLLINSIKRLMFGSLFAGFFMYNNIPPMNIpQLTMPLYLKITALAVTIMGFMLAMELNL--LTSNLKLKMTSHM 519
Cdd:MTH00165 411 NLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPY-MICLPFYLKLLTLFVILLGGWLGYELSLmsLSYNLKSLKNYKL 489
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 520 FKFSNSLGFYPAILHRLTPQFKLSMDQNTaSLLLDLAWLEKTMPKSTTHIQMLSSTIVSN-QKGLIKLYFLSFLASIILT 598
Cdd:MTH00165 490 SSFLGSMWFMPFLSTYGISYYPLNLGSLS-LKSFDQGWSEYFGGQGLYNFLKKLSKLIQWlQNNNLKIYLLSFLLWMIIL 568

                 ....*
gi 745999857 599 LLLIM 603
Cdd:MTH00165 569 LLLFL 573
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
66-501 7.18e-109

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 339.68  E-value: 7.18e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  66 WHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWE 145
Cdd:MTH00210  62 WRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWE 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 146 GVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWD---LQQLFILNYDPNLIPLMGLLL--AA 220
Cdd:MTH00210 142 GVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEfstISSLLVTNINKESLTIICLLLfiGA 221
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 221 TGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKK 300
Cdd:MTH00210 222 VGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKK 301
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 301 IVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMAL 380
Cdd:MTH00210 302 VIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSL 381
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 381 TGMPFLTGFYSKDYIIESASTSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPTLTYIN--ENNPLLINSIKRLM 458
Cdd:MTH00210 382 MGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGvhESSWNITFPLLLLA 461
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*...
gi 745999857 459 FGSLFAG-----FFMYNNIPPMnipqltMPLYLKITALAVTIMGFMLA 501
Cdd:MTH00210 462 FGSIFVGylgkeVVLSNVIPPI------VPNSIKMIPLLFSLLGALLA 503
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
53-601 3.34e-96

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 305.42  E-value: 3.34e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  53 LFIFSGQEMIISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILV 132
Cdd:MTH00209  21 VIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLI 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 133 TANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNtWDLqqlFILNYDPNLIP 212
Cdd:MTH00209 101 FVPNLITLLLGWDGLGLVSYLLV-IYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGN-WNI---FYLNFNSNLGS 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 213 LMGL--LLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAI 290
Cdd:MTH00209 176 VISVliVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASM 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 291 CALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTS 370
Cdd:MTH00209 256 SANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITS 335
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 371 SSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPTLTYINENNPLL 450
Cdd:MTH00209 336 ICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLN 415
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 451 INSIKRLMFGSLFAGFFMY--NNIPPMNIpqlTMPLYLKITALAVTIMGFMLAMELNLLTSNLKLKMTshMFKFSNSLGF 528
Cdd:MTH00209 416 LKPMLVLTLGSITGGSVMSwvMVPSVNSV---VLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKGYK--VNYFLSQMWF 490
                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 745999857 529 YPAILHRLTPQFKLSMDQNTASlLLDLAWLEKTMPKSTTHIQMLSSTIVSN-QKGLIKLYFLSFLASIILTLLL 601
Cdd:MTH00209 491 LPDLSSQPVNKFTMKLSKTMLK-LLDQGWVEKMSGQGSFKVLKKSSKLSQIiQNNSLKLFVTFMMLILLGVILF 563
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
23-603 9.12e-95

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 301.68  E-value: 9.12e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  23 MMNTHKNHYYAYYVQSSIAYAFTTSL--IPSTLFIfsgqemiisNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSI 100
Cdd:MTH00207   3 MFKPSSIASYLLWFMSILMFPLSLYLmmCNKTILI---------EWEIFTISSSPINFTIILDPTGTLFSSTVLFISANV 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 101 MEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDI 180
Cdd:MTH00207  74 LLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDV 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 181 GFILTMAWFLmYSNTWDLQQLFILNYDPNLIplMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLL 260
Cdd:MTH00207 153 MLLLSIGWTL-NQGHWSITNMWQTDMNNYIA--LSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLL 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 261 IRFYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLF 340
Cdd:MTH00207 230 IRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLF 309
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 341 MCSGSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIATSMTA 420
Cdd:MTH00207 310 VCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTA 389
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 421 IYSTRIIFYTLLNQPRFPTLTYINENNPLLINSIKRLMFGSLFAGFFMYNNIPPMNIPqLTMPLYLKITALAVTIMGFML 500
Cdd:MTH00207 390 AYSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEE-PILPLQYKLLPLLVVTLGALL 468
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 501 AMELNLLTSNLKLKMTSHMFKFSNSLGFYpaILHRLTPQFKLSMDQNTASL---LLDLAWLEKTMPKSTTHIQMLSSTIV 577
Cdd:MTH00207 469 AWLFTTPNITKTPLLINNPLSHFASCLMW--FLVPLSSQFIMSTPMNLSHNylkLLDQGWLEMLGAQGTFKMFSRSSNNV 546
                        570       580
                 ....*....|....*....|....*.
gi 745999857 578 SNQKGLIKLYFLSFLASIILTLLLIM 603
Cdd:MTH00207 547 MKLQKNIPNNYLMMSFVLLTIIIIMT 572
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
63-601 7.30e-92

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 296.87  E-value: 7.30e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  63 ISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFI 142
Cdd:MTH00032  59 IELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFI 138
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 143 GWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQL-------------------FI 203
Cdd:MTH00032 139 GWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgsgimdrgyygggaYE 218
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 204 LNYDPNLIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAI 283
Cdd:MTH00032 219 SPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGAL 298
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 284 TTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPH-LAFLHICNHAFFKAMLFMCSGSIIHNLN-NEQDIRKMGG 361
Cdd:MTH00032 299 TAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGG 378
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 362 LFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIE------------------------------------SASTSNTN 405
Cdd:MTH00032 379 LIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssllkiqgdigikkddrgsiggpEGYPSRGS 458
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 406 AWALTITLIATSMTAIYSTRIIFYTLLNQPRFPT----LTYINENNPLLINSIKRLMFGSLFAGfFMYNNIPPMNIPQLT 481
Cdd:MTH00032 459 AFAFWLGTVAALLTAFYSIRLVYITFIISPNSPKesliSSHINIVDKRVLTVLSLLCFGAIFVG-YLIQDILIGDIEHPI 537
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 482 MPLYLKITAlavTIMGfMLAMELNLLTSNLKLKMTSHMFKFSNSLGFYPAILHRLTP--QFKLSMDQNTASLL------- 552
Cdd:MTH00032 538 VPPLIKVMP---TLMG-LFGMGLCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLGGawQGDHLINKLVAIPLfsfghwg 613
                        570       580       590       600       610
                 ....*....|....*....|....*....|....*....|....*....|....
gi 745999857 553 ----LDLAWLEKTMPKSTTHIQMLSSTIVSN-QKGLIKLYFLSFLASIILTLLL 601
Cdd:MTH00032 614 iyktLDRGWLELFGPQGISTIALRVSQFISNlQSGVISRYALVLLSFTIIFLAL 667
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
68-430 5.17e-91

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 295.01  E-value: 5.17e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  68 WMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGV 147
Cdd:PRK07376  75 WASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELV 154
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 148 GIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWD-------LQQLFILNYDPN-LIPLMGLL-- 217
Cdd:PRK07376 155 GMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDfdgiadrLSELVSSGAVSGwLALLLCILvf 234
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 218 LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQND 297
Cdd:PRK07376 235 LGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQND 314
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 298 IKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNN--------EQDIRKMGGLFKAMPFT 369
Cdd:PRK07376 315 IKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPIT 394
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 745999857 370 SSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWAltITLIATSMTAIYSTRIIFYT 430
Cdd:PRK07376 395 AITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALWF--VGFLTAGMTAFYMFRMYFLT 453
ndhF CHL00025
NADH dehydrogenase subunit 5
107-430 1.45e-69

NADH dehydrogenase subunit 5


Pssm-ID: 214338 [Multi-domain]  Cd Length: 741  Bit Score: 239.02  E-value: 1.45e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 107 YMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTM 186
Cdd:CHL00025 114 YMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGI 193
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 187 AWFLMYSNTWDLQQLF-ILNydpNLIPLMG------------LLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 253
Cdd:CHL00025 194 LGFYWITGSFEFRDLFeIFN---NLIYNNEvnllfatlcaflLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 270
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 254 VAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHA 333
Cdd:CHL00025 271 AAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHA 350
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 334 FFKAMLFMCSGSIIHNL--------NNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYII-ESASTSNT 404
Cdd:CHL00025 351 YSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILnDSWLYSPI 430
                        330       340
                 ....*....|....*....|....*.
gi 745999857 405 NAWaltITLIATSMTAIYSTRIIFYT 430
Cdd:CHL00025 431 FAI---IAWSTAGLTAFYMFRIYLLT 453
PRK12647 PRK12647
putative monovalent cation/H+ antiporter subunit A; Reviewed
47-475 7.32e-65

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237156 [Multi-domain]  Cd Length: 761  Bit Score: 226.72  E-value: 7.32e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  47 SLIPSTLFIF--------SGQEMIISNWHWmtIQTMKLTLSFKLDYFSMLFvpvALFVT---WSIMEFSMWYMHSDPNIN 115
Cdd:PRK12647  21 ALLPLALFLYflsfipeiAAGETVRGGYAW--VPSLGVNLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLKGHPDLG 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 116 QFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGdiGFILTMAWFLMY--S 193
Cdd:PRK12647  96 RFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGG--GLALLAGLILLGnvT 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 194 NTWDLQQLF----ILNYDPNLIPLMGLLLA-ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLME 268
Cdd:PRK12647 174 GTYSLSELLasgdVIREHPLYLAILLLVLGgAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLG 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 269 NKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHL---AFLHICNHAFFKAMLFMCSGS 345
Cdd:PRK12647 254 GTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGI 333
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 346 IIHNLNNeQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIATSMTAIYSTR 425
Cdd:PRK12647 334 IDHETGT-RDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVLGNALMVAVAF 412
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 745999857 426 IIFYTLLNQPRFPTLTYINENNPLL-----INSIKRLMFGsLFAGFFMYNNIPPM 475
Cdd:PRK12647 413 LVGIKPFLGKLVETPKHPHEAPVLMwlgpaVLAVLGLLFG-LFPFFFHAALLSPA 466
PRK12648 PRK12648
putative monovalent cation/H+ antiporter subunit A; Reviewed
40-436 8.65e-65

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237157 [Multi-domain]  Cd Length: 948  Bit Score: 228.92  E-value: 8.65e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  40 IAYAFTTSLIPStlfIFSGqEMIISNWHWMtiQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFK 119
Cdd:PRK12648  38 AALVLLALLYPA---VAAG-EVIRAEIEWL--PALGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFS 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 120 YLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGdiGFILtMAWFLMYSN---TW 196
Cdd:PRK12648 112 FLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAG--GLAL-LAGVLLLGHivgSY 188
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 197 DLQQLF----ILNYDPNLIPLMGL-LLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLM---E 268
Cdd:PRK12648 189 DLDVVLaagdLIRAHPLYPPALVLiLLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLagtE 268
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 269 NKKIIMSMAlclGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPhLAFL----HICNHAFFKAMLFMCSG 344
Cdd:PRK12648 269 EWFWIVGGA---GLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSP-LAAVaaifHIINHATFKASLFMAAG 344
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 345 SIIHnlnnE---QDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKD-YIIESASTSNTNAWALTITLIAT---S 417
Cdd:PRK12648 345 IIDH----EtgtRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEmFFAETLDTHLLGSLDWLLPVAATlagA 420
                        410
                 ....*....|....*....
gi 745999857 418 MTAIYSTRIIFYTLLNQPR 436
Cdd:PRK12648 421 FSVAYSLRFIHDVFFGPPP 439
PRK12650 PRK12650
DUF4040 family protein;
76-436 2.58e-58

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 210.67  E-value: 2.58e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  76 LTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK12650  71 VNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLI 150
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 156 GwwYGRADANTAALQAILYNRIGdiGFILTMAWFLMYSNTWDLQQLFILNYD-----PNLIPLMGLLLA--ATGKSAQFG 228
Cdd:PRK12650 151 A--RSGSGGEAGSIRTLILTFFG--GLTLLAAVAIAATQTGTTSLSGILHSDvwaekPGLTTVVAVLIAvaAFTKSAQFP 226
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSS 308
Cdd:PRK12650 227 FHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVS 306
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 309 QLGLMMVTIGINQPH---LAFLHICNHAFFKAMLFMCSGSIIHNLNNeQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPF 385
Cdd:PRK12650 307 QLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQAGT-RDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 745999857 386 LTGFYSKDYIIESASTSNTNAWALTITLIATSMTAI----YSTRIIFYTLLNQPR 436
Cdd:PRK12650 386 LFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVftfaYSARLVLGAFVDGPR 440
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
79-430 2.76e-58

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 201.14  E-value: 2.76e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  79 SFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGwW 158
Cdd:COG0651   71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-L 149
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 159 YGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQL--FILNYDPNLIPL-MGLLLAATG-KSAQFGLHPWLP 234
Cdd:COG0651  150 GGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaaRLAELDPGLLLAaFALLLVGFGiKAALFPLHFWLP 229
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 235 SAM-EGPTPVSALLhSSTMVVAGIFLLIRFYPLM---ENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQL 310
Cdd:COG0651  230 DAYpAAPSPVSALL-SGLLTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 311 GLMMVTIGINQPHL---AFLHICNHAFFKAMLFMCSGSIIHNLnNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLT 387
Cdd:COG0651  309 GYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....
gi 745999857 388 GFYSKDYIIESASTSntNAWALTITLIATS-MTAIYSTRIIFYT 430
Cdd:COG0651  388 GFVSKWLLLQAALEA--GAWLLAAVLLLSSlLTLAYFVRIFGRA 429
2a6301s01 TIGR00940
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ...
40-436 3.00e-57

Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273353 [Multi-domain]  Cd Length: 793  Bit Score: 205.85  E-value: 3.00e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857   40 IAYAFTTSLIPSTlfifSGQEMIISNWHWMTIQTMKLTLsfKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFK 119
Cdd:TIGR00940  37 VCFLYTLGLYPYT----ASGGVLHYTIDWVPELGLNFTL--YMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYA 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  120 YLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDI----GFILTMAWFLMYSNT 195
Cdd:TIGR00940 111 YLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLamlgGLILLGKITGSFSID 190
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  196 WDLQQLFILNYDPNLIPLMGL-LLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIM 274
Cdd:TIGR00940 191 AVIASADAIRNSPLFGTAMVLvLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWF 270
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  275 SMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHL----------------AFLHICNHAFFKAM 338
Cdd:TIGR00940 271 WIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGS 350
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  339 LFMCSGSIIHNlNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTS------NTNAWALT-- 410
Cdd:TIGR00940 351 LFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAhlvnpfDTVTLGYLfp 429
                         410       420
                  ....*....|....*....|....*..
gi 745999857  411 -ITLIATSMTAIYSTRIIFYTLLNQPR 436
Cdd:TIGR00940 430 yVATVASVFTFVYSLRFIHGVFFGRPK 456
PRK12646 PRK12646
DUF4040 family protein;
68-438 5.25e-56

DUF4040 family protein;


Pssm-ID: 183646 [Multi-domain]  Cd Length: 800  Bit Score: 202.68  E-value: 5.25e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  68 WMTIqtMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYM-HSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEG 146
Cdd:PRK12646  64 WMKT--LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWEL 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 147 VGIMSFLLIGWWYGRADANTAALQAILYNRIGD----IGFIltMAWFLMYSNTWD--LQQLFILNYDPNLIPLM-GLLLA 219
Cdd:PRK12646 142 TSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGlallVGFI--MLYIMTGTNNITeiLGQADHIKNHGLFIPMIfMFLLG 219
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 220 ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIK 299
Cdd:PRK12646 220 AFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLK 299
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 300 KIVAFSTSSQLGLMMVTIGIN-----QPHLAF------------LHICNHAFFKAMLFMCSGSIIHNlNNEQDIRKMGGL 362
Cdd:PRK12646 300 GILAYSTISQLGMIMAMVGIGggyaqHQQDAIasiyvfvlfaalFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGM 378
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 363 FKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIES-ASTSNTNAWALTIT-------LIATSMTAIYSTRII---FYTL 431
Cdd:PRK12646 379 RQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDAlTQTGQLSQFSLISMiiivfigVIASIFTFTYALYMVkevFWGK 458

                 ....*..
gi 745999857 432 LNQPRFP 438
Cdd:PRK12646 459 YDSKVFT 465
PRK12644 PRK12644
putative monovalent cation/H+ antiporter subunit A; Reviewed
66-428 1.95e-53

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237154 [Multi-domain]  Cd Length: 965  Bit Score: 196.68  E-value: 1.95e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  66 WHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSD-PNINQFFKYLLLFLITMLILVTANNLFQLFIGW 144
Cdd:PRK12644  56 EVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFW 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 145 EGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDigfiLTM-AWFLMYSN---TWDLQQlfILNYDPN----LIPLMGL 216
Cdd:PRK12644 136 ELTTVLSFLLIGHYAERAASRRAALQALLVTTAGG----LAMlVGIIILGQaagTYRLSE--LLADPPTgpavSVAVVLI 209
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 217 LLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQN 296
Cdd:PRK12644 210 LVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQH 289
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 297 DIKKIVAFSTSSQLGLMMVTIGINQPH--LAFLH-ICNHAFFKAMLFMCSGSIIHNlNNEQDIRKMGGLFKAMPFTSSSL 373
Cdd:PRK12644 290 DLKLILAYGTVSQLGFLTVLVGIGTRDaaLAGLAmLLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVA 368
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 745999857 374 IIGSMALTGMPFLTGFYSK----DYIIESASTSNTNAWALTITLIATSMTAIYSTRIIF 428
Cdd:PRK12644 369 ALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGSILTVAYSLRFLW 427
PRK07390 PRK07390
NAD(P)H-quinone oxidoreductase subunit F; Validated
43-426 6.28e-53

NAD(P)H-quinone oxidoreductase subunit F; Validated


Pssm-ID: 236008 [Multi-domain]  Cd Length: 613  Bit Score: 190.89  E-value: 6.28e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  43 AFTTSLIpsTLFIFSGQEMIISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLL 122
Cdd:PRK07390  50 AFVHSLL--ALRAIWNQPPQQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLG 127
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 123 LFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLF 202
Cdd:PRK07390 128 FFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLA 207
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 203 I----LNYDPNLIPLMGLLLAA--TGKSAQFGLHPWLPSAMEGPTPVSaLLHSSTMVVAGIFLLIRFYPLMENKKIIMSM 276
Cdd:PRK07390 208 AwaatANLDPLTATLLGLALIAgpTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLALSPVALTV 286
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 277 ALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNlNNEQDI 356
Cdd:PRK07390 287 LIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT-TITQDL 365
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 357 RKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESAstSNTNAWALTITLIATSMTAIYSTRI 426
Cdd:PRK07390 366 TELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGL--WAVSPWLVGVLLLVNALTAFNLTRV 433
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
134-416 2.83e-52

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 180.97  E-value: 2.83e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  134 ANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQL-----FILNYDP 208
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  209 NLIPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFYPLMENKKIIMS-MALCLGAITTL 286
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIQqILLILAIISML 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  287 FTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPH---LAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLF 363
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 745999857  364 KAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNaWALTITLIAT 416
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWI-FLVLAGVVGS 291
ND5 MTH00095
NADH dehydrogenase subunit 5; Provisional
76-433 2.74e-51

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177158 [Multi-domain]  Cd Length: 527  Bit Score: 184.74  E-value: 2.74e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  76 LTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:MTH00095  37 LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 156 gWWYGRADANTAALQAILYNRIGDIgFILTMAWFLMYSNTWDLQQLFILNYdpnliPLMGLLLAATGKSAQFGLHPWLPS 235
Cdd:MTH00095 117 -LFYNNWDSNSGAMNTALTNRIGDF-FIFLFFSGFIFSSYYFFSFSFFSSS-----MILMLLLTSFTKSAQFPFSSWLPK 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 236 AMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMaLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMV 315
Cdd:MTH00095 190 AMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIM-LLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSML 268
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 316 TIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYI 395
Cdd:MTH00095 269 TFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELI 348
                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 745999857 396 IESASTSNTNAWALTITLIATSMTAIYSTRIIFYTLLN 433
Cdd:MTH00095 349 LELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
PRK12645 PRK12645
monovalent cation/H+ antiporter subunit A; Reviewed
48-436 6.99e-51

monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237155 [Multi-domain]  Cd Length: 800  Bit Score: 187.82  E-value: 6.99e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  48 LIPSTLFIF--------SGQEMIISNWHWMTIQTMKLTLsfKLDYFSMLFvpvALFVTWS---IMEFSMWYMHSD-PNIN 115
Cdd:PRK12645  36 PVPVVLFIYflslipttMSGNTVMKTLPWIPSLGINFTL--YVDGLSLLF---ALLITGIgslVVLYSIYYLSKKkEQLG 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 116 QFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDI----GFILtmawFLM 191
Cdd:PRK12645 111 NFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLsmlgGFIL----LYI 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 192 YSNTWDLQQLF----ILNYDPNLIPLMGL-LLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPL 266
Cdd:PRK12645 187 MTGSFSIREMIanadEIQNSPLFIPAMILiLLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPI 266
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 267 MENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHL----------------AFLHIC 330
Cdd:PRK12645 267 FAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLI 346
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 331 NHAFFKAMLFMCSGSIIHNLNNeQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIES------ASTSNT 404
Cdd:PRK12645 347 NHATFKGSLFMIVGIVDHETGT-RDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESmlnateANLFSL 425
                        410       420       430
                 ....*....|....*....|....*....|....*
gi 745999857 405 NAWALTITLIA---TSMTAIYSTRIIFYTLLNQPR 436
Cdd:PRK12645 426 DTWGVLFPVIAwvaSVFTFVYSIIFIFKTFFGKYK 460
PRK06525 PRK06525
hydrogenase 4 subunit D; Validated
80-416 9.30e-50

hydrogenase 4 subunit D; Validated


Pssm-ID: 180606 [Multi-domain]  Cd Length: 479  Bit Score: 179.40  E-value: 9.30e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  80 FKLDYFSMLFVPVALFVTWSIMEFSMWYMH-------SDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSF 152
Cdd:PRK06525  71 LVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSW 150
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 153 LLIGWwYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLFILNYDPNLIPLMGLLLAATGKSAQFGLHPW 232
Cdd:PRK06525 151 ALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSW 229
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 233 LPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMEN-KKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG 311
Cdd:PRK06525 230 LPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLG 309
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 312 LMMVTI--GINQPHLAF----LHICNHAFFKAMLFMCSGSIIHNLNNeQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPF 385
Cdd:PRK06525 310 YMFFGLslAILGSRLALegsiAYIFNHAFAKSLFFLVAGALSYSCGT-RLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
                        330       340       350
                 ....*....|....*....|....*....|.
gi 745999857 386 LTGFYSKDYIIESASTSNTNAWALTITLIAT 416
Cdd:PRK06525 389 FNGFFSKFPIFAAGFELSVEYWILLPAMVLL 419
PRK12649 PRK12649
putative monovalent cation/H+ antiporter subunit A; Reviewed
76-399 4.35e-49

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 183649 [Multi-domain]  Cd Length: 789  Bit Score: 182.72  E-value: 4.35e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  76 LTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK12649  72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 156 GWWYGRADANTAALQAILynrIGDIGFILTMAWFLMYSN---TWDLQQLF--------ILNYDPNLIPLMGLLLAATGKS 224
Cdd:PRK12649 152 GYWRHRPESVYGATKSLL---ITAGGGLFMFAGFLLLHVitgTYDIATILqdselienIKGHPLFLITLILIFIGAAAKS 228
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 225 AQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAF 304
Cdd:PRK12649 229 AQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAY 308
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 305 STSSQLGLMMVTIGINQPH-------LAFLHICNHAFFKAMLFMCSGSIIHNLNNeQDIRKMGGLFKAMPFTSSSLIIGS 377
Cdd:PRK12649 309 STISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAAT-RDIRKLGGLRKEMPITFIVASIAA 387
                        330       340
                 ....*....|....*....|..
gi 745999857 378 MALTGMPFLTGFYSKDYIIESA 399
Cdd:PRK12649 388 LAMAGIPPLNGFLSKEMFYETS 409
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
422-602 1.01e-40

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 146.16  E-value: 1.01e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  422 YSTRIIFYTLLNQPRFPTLTYINENNPLLINSIKRLMFGSLFAGFFMYNNIPPmNIPQLTMPLYLKITALAVTIMGFMLA 501
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFP-KPPMMTMPLYLKLLALLVTILGLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  502 MELNLLTSNLKLK-MTSHMFKFSNSLGFYPAILHRLTPQFKLSMDQNTASlLLDLAWLEKTMPKSTTHIQMLSSTIVSN- 579
Cdd:pfam06455  80 LELSNLSNKQLKKsLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAK-QIDQGWSEKFGPQGIAKTLMTLSKIIQNs 158
                         170       180
                  ....*....|....*....|...
gi 745999857  580 QKGLIKLYFLSFLASIILTLLLI 602
Cdd:pfam06455 159 QKGLIKIYLLSFLLWLLLLLLLI 181
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
82-436 6.91e-38

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 147.04  E-value: 6.91e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  82 LDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGR 161
Cdd:PRK12667  80 VDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDR 159
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 162 ADANTAALQ----------------AILYNRIG-----DIGFILTMAWFLMYSNtwdlqqlFILNYDPNLIPLMGLLLAA 220
Cdd:PRK12667 160 GDAVEAAIKyaligavgttlyflalAFLYATFGtlnmaDLSAKIRGLSFPLTGG-------LAGNPPLALGVALALALWA 232
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 221 -TGKSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRFY--------PLMENKKIIMSMALCLGAITTLFTAI 290
Cdd:PRK12667 233 fTIKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGAL 311
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 291 CALTQNDIKKIVAFSTSSQLGLMMVTIGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHNLNNeQDIRKMGGLFKAMP 367
Cdd:PRK12667 312 MMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAGT-RDIDELAGLGRKMP 390
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 745999857 368 FTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALtITLIATSMTAIYSTRIIFYTLLNQPR 436
Cdd:PRK12667 391 IASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPAL-VLLIASAISLVGYFRAWYSLFFGKPK 458
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
76-467 1.56e-37

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 145.41  E-value: 1.56e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  76 LTLSFKLDYFSMLFVPVALFVTWsimeFSMWYMHSDPNINQFFKY-LLLFLITMLI--LVTANnLFQLFIGWEGVGIMSF 152
Cdd:PRK08375  69 IGIELRADSLSALFLLVTSILAI----AALLYAIGYGEHRQTRFYaLFLLLLAGLLgaLLTAD-LFNLFVFLEIMSLSSY 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 153 LLIGWwYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLF-ILNYDPNLIPLMGLLLAATG-KSAQFGLH 230
Cdd:PRK08375 144 ALVAM-GGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgALAENPTVVTAFGFVLLALAlKAAVFPLH 222
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 231 PWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFY-----PLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFS 305
Cdd:PRK08375 223 TWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYS 302
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 306 TSSQLGLMMVTIGINQPHL---AFLHICNHAFFKAMLFMCSGSIIHNLNNeQDIRKMGGLFKAMPFTSSSLIIGSMALTG 382
Cdd:PRK08375 303 TVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYGT-RRLSELSGLGRRMPLTAAAFAVASLSLIG 381
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 383 MPFLTGFYSKDYIIEsASTSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPTLTYINENNPLLINSIKRLMFGSL 462
Cdd:PRK08375 382 VPPTSGFVSKWYLVV-GAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSLALALLSL 460

                 ....*
gi 745999857 463 FAGFF 467
Cdd:PRK08375 461 LLGIY 465
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
71-425 9.99e-36

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 140.22  E-value: 9.99e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  71 IQTMKLTLSFKLDYFSMLFVPVALFVTWSIMeFSMWYmHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIM 150
Cdd:COG1008   69 IPSLGISYHLGVDGISLPLVLLTALLTPLAI-LASWN-EIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIP 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 151 SFLLIGWWyGRADANTAALQAILYNRIGD----IGFIltMAWFLMYSNTWDLQQLFILNYDPNL-IPLMGLLLAATG-KS 224
Cdd:COG1008  147 MYFLIGIW-GGERRIYAAIKFFLYTLAGSllmlVAIL--ALYFLAGALTFDIAELAAAPLPLTAqLLLFLAFFIAFAvKV 223
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 225 AQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRF-YPLM-ENKKIIMSMALCLGAITTLFTAICALTQNDIKKI 301
Cdd:COG1008  224 PMFPFHTWLPDAhVEAPTAGSVLL-AGVLLKMGGYGLLRFaLPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRL 302
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 302 VAFSTSSQLGLMMV------TIGINQphlAFLHICNHAFFKAMLFMCSGSIIHNLNNeQDIRKMGGLFKAMPFTSSSLII 375
Cdd:COG1008  303 IAYSSVSHMGFVLLgifalnPLGLQG---AVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLL 378
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|
gi 745999857 376 GSMALTGMPFLTGFYSKDYIIESASTSNTnaWALTITLIATSMTAIYSTR 425
Cdd:COG1008  379 AALASLGLPGTSGFVGEFLVLLGAFQVNP--WLAILAALGLILTAAYLLW 426
PRK08168 PRK08168
NADH-quinone oxidoreductase subunit L;
98-347 1.87e-32

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236171 [Multi-domain]  Cd Length: 516  Bit Score: 131.36  E-value: 1.87e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  98 WSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRI 177
Cdd:PRK08168  83 WVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRL 162
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 178 GDIgfILTMAWFLMYSNT--WDLQQL-FILNYDPNLIPL----MGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSS 250
Cdd:PRK08168 163 AEL--LLLAAAALAYLEVgsLSLSALwAHLAAQGASPSLqaaaLLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAG 240
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 251 TMVVAGiFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHIC 330
Cdd:PRK08168 241 VVNLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLV 319
                        250
                 ....*....|....*..
gi 745999857 331 NHAFFKAMLFMCSGSII 347
Cdd:PRK08168 320 AHSLYKAHAFLSASEAV 336
PRK12668 PRK12668
Na(+)/H(+) antiporter subunit D;
132-419 3.50e-30

Na(+)/H(+) antiporter subunit D;


Pssm-ID: 237168 [Multi-domain]  Cd Length: 581  Bit Score: 125.39  E-value: 3.50e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 132 VTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGdiGFILTMAWFLMYSNT--WDLQQLFILNYDPN 209
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLG--GVLLLAGILLHYAETgsFAFGAIAGLGGTAA 186
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 210 LIPLMGLLLaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMEnkkIIMSMalclGAITTLFTA 289
Cdd:PRK12668 187 WLILIGFGV----NAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTE---LLIYI----GAAMAVYGV 255
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 290 ICALTQNDIKKIVAFSTSSQLGLMMVTIGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHNLNnEQDIRKMGGLFKAM 366
Cdd:PRK12668 256 FFALLENDLRRLLSYHIVSQVGYMVAGIGIGTAlaiNGAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSM 334
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 745999857 367 PFTSSSLIIGSMALTGMPFLTGFYSKDYIIeSASTSNTNAWALTITLIATSMT 419
Cdd:PRK12668 335 PLTALFCLVGALSISAFPLFSGFVSKSMII-SAAGEDHYVWVWLLLLLASAGT 386
PRK06521 PRK06521
hydrogenase 4 subunit B; Validated
123-421 7.09e-30

hydrogenase 4 subunit B; Validated


Pssm-ID: 235820 [Multi-domain]  Cd Length: 667  Bit Score: 125.00  E-value: 7.09e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 123 LFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALqaiLYNRIGDIGFILTM-AWFLMYSNTWDLQql 201
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGF---LYLLMAHAGALAILlAFGLLARESGSYD-- 195
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 202 FILNYDPNLIPLMG---LLLAATGKSAQFG---LHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRF-YPLMENKKII 273
Cdd:PRK06521 196 FAAMRAAHLSPFWAslvFLLALFGFGAKAGlvpLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVvFDLLGAPGWW 274
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 274 MS-MALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGI-------NQPHLAFL-------HICNHAFFKAM 338
Cdd:PRK06521 275 WGvLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAALaltaalyHLLNHALFKSL 354
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 339 LFMCSGSIIHNLNnEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESA-STSNTNAWALTITL-IAT 416
Cdd:PRK06521 355 LFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLlSSPGLPQWGLKLAVpIAA 433

                 ....*
gi 745999857 417 SMTAI 421
Cdd:PRK06521 434 AMLAL 438
PRK08667 PRK08667
hydrogenase membrane subunit; Validated
48-398 6.48e-29

hydrogenase membrane subunit; Validated


Pssm-ID: 236331 [Multi-domain]  Cd Length: 644  Bit Score: 121.76  E-value: 6.48e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  48 LIPSTLFIFSGQEMIISNWHWMTiqtmKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWY---MHSDPNINQFFKYLLLF 124
Cdd:PRK08667  45 LFAGSLQLFTGNPLDIPLWGIAP----GLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALF 120
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 125 LITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQqlfIL 204
Cdd:PRK08667 121 ILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELS---PL 197
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 205 NYDPNLIPLMGLLL--AATGKSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFYPLMENKKIIMSMA-LCL 280
Cdd:PRK08667 198 GASAGILSLVFLLLflGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWGVLiLLA 276
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 281 GAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGI-------NQPHLAFL-------HICNHAFFKAMLFMCSGSI 346
Cdd:PRK08667 277 GSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAGSV 356
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|..
gi 745999857 347 IHNLNNeQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIES 398
Cdd:PRK08667 357 VHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYES 407
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
80-467 1.25e-28

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 119.82  E-value: 1.25e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  80 FKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWY 159
Cdd:PRK08376  86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 160 GRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLFI-LNYDPNLIPLMGLLLAATG---KSAQFGLHPWLPS 235
Cdd:PRK08376 166 DTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVkMSENPTVVAKIALALFIAGlamKSGAVPVHMWLPD 245
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 236 AM-EGPTPVSALLHSSTmvVAGIFLLIR----FYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQL 310
Cdd:PRK08376 246 AYpAAPSSISAMLLVIK--QAGLYALARvlfsIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 311 GLMMVTIGINQPHL---------------AFLHICNHAFFKAMLFMCSGSIIHNLNNeQDIRKMGGLFKAMPFTSSSLII 375
Cdd:PRK08376 324 GYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT-RNLNELGGLARTMPKTTIAFLI 402
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 376 GSMALTGMPFLTGFYSKDYIIESASTSNTnawALTITLIATSMTAIYSTRIIFYTLLNQPRFPTLTYINENNPLLINSIK 455
Cdd:PRK08376 403 GAAAIVGLPPFNGFASKWLIYESSALFNP---ILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVKEPPKPMLVPML 479
                        410
                 ....*....|..
gi 745999857 456 RLMFGSLFAGFF 467
Cdd:PRK08376 480 ILAIAIIGMGLF 491
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
76-451 1.32e-28

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 119.54  E-value: 1.32e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  76 LTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDpNINQFFKYLLLFLITMLILVTAN---NLFQLFIGWEGVGIMSF 152
Cdd:PRK06589  75 YSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAIN-NIDSSSRFLFFFNLTILIGVLIAlssDLFTMFVCYELLTISTA 153
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 153 LLIGWwygradANTAALQAILYNRIGDIGFILTMAWF----LMYS--NTWDLQQLFILNYDPNLIPLMgLLLAATGKSAQ 226
Cdd:PRK06589 154 FLIGH------TRNNISLSGGYKYLKILMISALLLFLpaviLIYTktGNLDFVSGGLFSKNQSIILLL-MFIYGIAKTAI 226
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPL---MENKKIIMSMA--LCLGAITTLFTA-ICALTQNDIKK 300
Cdd:PRK06589 227 FPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRIFAEFnwLIFIPIVSIFYSsLKALKTDNIKK 306
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 301 IVAFSTSSQLGLMMVTIGINQP---HLAFLHICNHAFFKAMLFMCSGSIIhNLNNEQDIRKMGGLFKAMPFTSSSLIIGS 377
Cdd:PRK06589 307 ILAYSTISQLSLALLSAFILTPkalGAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISS 385
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 745999857 378 MALTGMPFLTGFYSKDYIIESASTSNtNAWALTITLIATSMTAIYSTRIIFYTLLN--QPRFPTLTYINENNPLLI 451
Cdd:PRK06589 386 LSLIGIPIFSGFISKFLILLAASEQN-QPWLSIIVMLVVIASSILSALYLLKILSSiyKPSLSENSFITKSLPYLM 460
PRK08377 PRK08377
NADH dehydrogenase subunit N; Validated
85-427 5.20e-27

NADH dehydrogenase subunit N; Validated


Pssm-ID: 181406 [Multi-domain]  Cd Length: 494  Bit Score: 114.86  E-value: 5.20e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  85 FSMLFVPVALFVTWSIMEFSMWYMHSDPNInqffKYLLLFLITMLI---LVTANNLFQLFIGWEGVGIMSFLLIGWwYGR 161
Cdd:PRK08377  79 FAALFVLIIAIVSFIMSIFSLKAVEVEPID----KYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAY-NKT 153
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 162 ADANTAALQAILYNRIGDIGFILTMAwfLMYSNTWDLQQL----FILNYDPNL--IPLMGLLLAATGKSAQFGLHPWLPS 235
Cdd:PRK08377 154 GEAAEASMKYIVLGGIGSSFFLIGVA--LIYGATGTLNMAhiaqLAGTIDPTVaqVGLALLIFGLAVEAELFPLNAWAPD 231
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 236 AMEG-PTPVSALLhSSTMVVAGIFLLIRFYPLMENKK---IIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG 311
Cdd:PRK08377 232 AYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVG 310
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 312 LMMVTIGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQdIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTG 388
Cdd:PRK08377 311 MIALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNV 389
                        330       340       350
                 ....*....|....*....|....*....|....*....
gi 745999857 389 FYSKDYIIeSASTSNTNAWALTITLIATSMTAIYSTRII 427
Cdd:PRK08377 390 FWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRLI 427
PRK07234 PRK07234
putative monovalent cation/H+ antiporter subunit D; Reviewed
78-428 1.15e-26

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235978 [Multi-domain]  Cd Length: 470  Bit Score: 113.51  E-value: 1.15e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  78 LSFKLDYFSMLFVPVALFVtWSIMEFSMWymhsDPNINQFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFLLIG 156
Cdd:PRK07234  61 VTLRADALSGYFILTNALV-TLAVIFYCW----ESAKTRFFYAQLLILHGSVNAAfVCADLISLYVALEVLSIATFLLVA 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 157 wwYGRAD-ANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLfiLNYDPNLIPL--MGLLLaatgKSAQFGLHPWL 233
Cdd:PRK07234 136 --YPRTDrAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGL--ATADPEAFALiaLGLLV----KGGIFVSGLWL 207
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 234 PSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMalcLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLM 313
Cdd:PRK07234 208 PLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRI---FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFI 284
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 314 MVTIGINqphlAFLHICnHAFFKAMLFMCSGsIIHNLNNEQDIRKMGGLFKAMPftsssLIIGSMALTGMPFLTGFYSKD 393
Cdd:PRK07234 285 LAAPLVG----GLYALA-HGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKV 353
                        330       340       350
                 ....*....|....*....|....*....|....*
gi 745999857 394 YIIesastSNTNAWALTITLIATSMTAIYSTRIIF 428
Cdd:PRK07234 354 LTL-----KNLLPWQAIALNLAAVGTAASFWKFIF 383
PRK06458 PRK06458
hydrogenase 4 subunit F; Validated
80-414 1.38e-26

hydrogenase 4 subunit F; Validated


Pssm-ID: 235805 [Multi-domain]  Cd Length: 490  Bit Score: 113.49  E-value: 1.38e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  80 FKLDYFSMLFVPVALFVTWSIMEFSMWYMH--------SDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMS 151
Cdd:PRK06458  65 FFIDDLNVFFLALIGVVGFLTSLYSIGYMRhevehgelSPVTLRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSS 144
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 152 FLLIGwWYGRADANTAALQAILynrIGDIGfiLTMAWF---LMYSN------------TWDLQQLFILNYDPNLIPL--M 214
Cdd:PRK06458 145 ALLVG-IYRTRASLEAAWKYII---ICSVG--VAFALFgtiLVYANaatvmgdgemaiLWTELLKHASLLDPTLMKLafV 218
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 215 GLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAgIFLLIRFYPLMENKKIIM---SMALCLGAITTLFTAI 290
Cdd:PRK06458 219 FLLIGFGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAIGSDfpgRLLLIFGLLSVLVAAF 297
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 291 CALTQNDIKKIVAFSTSSQLGLMMVTIGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHNLnNEQDIRKMGGLFKAMP 367
Cdd:PRK06458 298 FLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPlgiFAALLHMLNHSLTKSAIFFASGNVLQKY-GTRDINVIRGLLKVSP 376
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 745999857 368 FTSSSLIIGSMALTGMPFLTGFYSKDYIIesASTSNTNAWALTITLI 414
Cdd:PRK06458 377 LTGWGLMLGALAIAGMPPFGVFISEFLIL--TAGLARGPLLIAILLL 421
ND5 MTH00063
NADH dehydrogenase subunit 5; Provisional
118-425 1.98e-25

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214414 [Multi-domain]  Cd Length: 522  Bit Score: 110.35  E-value: 1.98e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 118 FKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWD 197
Cdd:MTH00063  79 NKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLI-LFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSF 157
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 198 LQQLFILnydpnliplmglLLAATgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLME-NKKIIMSM 276
Cdd:MTH00063 158 LCCLFFF------------LIVFT-KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGfSWLSIFFS 224
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 277 ALCLgaITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDI 356
Cdd:MTH00063 225 VLLL--LTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSS 302
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 745999857 357 R-----KMGGLFkaMPFTSSSLIIGsmaLTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIATSMTAIYSTR 425
Cdd:MTH00063 303 NcvyssILYGSW--NLFYLFLLVLG---LSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFR 371
PRK05846 PRK05846
NADH:ubiquinone oxidoreductase subunit M; Reviewed
71-423 3.03e-25

NADH:ubiquinone oxidoreductase subunit M; Reviewed


Pssm-ID: 235622 [Multi-domain]  Cd Length: 497  Bit Score: 109.52  E-value: 3.03e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  71 IQTMKLTLSFKLDYFSMLFVPVALFVTwSIMEFSMWYMHSDpNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIM 150
Cdd:PRK05846  69 IPRFGISYHLGVDGISLLLVVLTALLT-PLAVLASWEEIKK-RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIP 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 151 SFLLIGWWyGRADANTAALQAILYNRIGD----IGFILTMAWFLMYSNTWDLQQLFILNYDPNL-IPLMGLLLAATG-KS 224
Cdd:PRK05846 147 MYFLIGVW-GGKNRIYAATKFFLYTLLGSllmlVAIIYLVVVYYNATGTFDIADLLNLPLPPGVqYWLFLAFFIAFAvKM 225
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 225 AQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL------LIRF-YPLMEN-KKIIMSMALCLGAITTLFTAICALTQ 295
Cdd:PRK05846 226 PMFPLHTWLPDAHvQAPTAGSVLL-------AGILLkmgaygLLRFsLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQ 298
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 296 NDIKKIVAFSTSSQLGLmmVTIGI---NQPHL--AFLHICNHAFFKAMLFMCSGSIIHNLNNEqDIRKMGGLFKAMPFTS 370
Cdd:PRK05846 299 TDIKKLIAYSSISHMGF--VTLGIfagNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLA 375
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 745999857 371 SSLIIGSMALTGMPFLTGFYSKDYIIesASTSNTNAWALTITLIATSMTAIYS 423
Cdd:PRK05846 376 AFFLFFAMASLGLPGTSGFVGEFLIL--LGSFQVNPVIAFIATTGLILAAVYS 426
PRK08668 PRK08668
NADH dehydrogenase subunit M; Validated
76-399 9.14e-24

NADH dehydrogenase subunit M; Validated


Pssm-ID: 236332 [Multi-domain]  Cd Length: 610  Bit Score: 105.85  E-value: 9.14e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  76 LTLSFKLDYFSMLFVPVALFVTWSIMEFSM-WYMHSDPNINQFfkyLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLL 154
Cdd:PRK08668  61 FKLTFTLTHLSWFFAMISLLVIFSVAFFMVsEKTKNDAYFNMF---ALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMM 137
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 155 IgwWYGRADANTAALQAILYNRIGDIGFIltMAWFLMYSNT-----WDLQQLFILNYDPNLIPLMGLLLAATG--KSAQF 227
Cdd:PRK08668 138 V--PMGKKESRKASLKYFVLSAIGAYAML--YAIFLIYAKTgtfdfADISQGLINDTSTGFALIVFLFLLAFGvaKAGIF 213
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 228 GLHPWLPSAM-EGPTPVSALLhSSTMVVAGIF-LLIRFYPLMENK-----KIIMSMAL------CLGAITTLFTAICALT 294
Cdd:PRK08668 214 PLHVWAPDAYsEAPQSFSAVL-SGQLSKLGAYgFLLVLYVLPGTKlfsefGTYRGVPLfnyilaWLGNISIIVGTLMAIL 292
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 295 QNDIKKIVAFSTSSQLGLMMVTIGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHNlNNEQDIRKMGGLFKAMPFTSS 371
Cdd:PRK08668 293 QEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKMPFTFA 371
                        330       340
                 ....*....|....*....|....*...
gi 745999857 372 SLIIGSMALTGMPFLTGFYSKDYIIESA 399
Cdd:PRK08668 372 MYLVAIISLAGIPPMSGFASKWLIFEAL 399
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
79-422 2.58e-21

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 97.11  E-value: 2.58e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  79 SFKLDYFSMLFVPVALFVTWSIMEFSMWYMhSDPNINQFFKYLLLFLIT--MLILVTANNLFQLFIGWEGVGIMSFLLIG 156
Cdd:COG1007   65 MFVVDGFALFFKLLILLAALLVLLLSRDYL-ERRGLLRGEFYALLLFATlgMMLMASANDLLTLFLGLELLSLSLYVLVA 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 157 WWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQL---FILNYDPNLIPLMGLLLAATG---KSAQFGLH 230
Cdd:COG1007  144 FRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIaaaLAAGGANSPLLLLGLVLVLAGlafKLSAVPFH 223
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 231 PWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIR-FYPLMENKKIIMSMALCLGAITTLFT-AICALTQNDIKKIVAFSTS 307
Cdd:COG1007  224 MWTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRlLVEAFPGLAADWQLLLAVLAVLSMTVgNLAALAQTNVKRMLAYSSI 302
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 308 SQLGLMMVTIGINQPH---LAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMP 384
Cdd:COG1007  303 AHAGYLLLGLAAGTPLgvsAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIP 382
                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 745999857 385 FLTGFYSKDYIIESAstSNTNAWALTITLIATSMTAIY 422
Cdd:COG1007  383 PTAGFFGKFYVFSAA--VEAGLYWLAVIAVLNSVISAY 418
PRK12662 PRK12662
putative monovalent cation/H+ antiporter subunit D; Reviewed
114-430 8.89e-21

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 183662 [Multi-domain]  Cd Length: 492  Bit Score: 95.96  E-value: 8.89e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 114 INQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRAdANTAALQAILYNRIGDIGFILTMAWFLMYS 193
Cdd:PRK12662 109 IPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGATFYLIGIGFLYAIT 187
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 194 NTWDLQQLFILNYD--PNLIPLMGLLLAATG---KSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR-FYPL 266
Cdd:PRK12662 188 GTLNMGDMFLIIQDlpTNRAIQIGVLFIMVGlfiKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRiVYDV 266
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 267 MENKKIIMS-----MALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPH---LAFLHICNHAFFKAM 338
Cdd:PRK12662 267 FKANFVFTTlpfnnVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSA 346
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 339 LFMCSGSIIHNLNNeQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSntNAWALTITLIATSM 418
Cdd:PRK12662 347 LFMVSGSISYHFGT-TKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS--NAWIGLVVLLVGSG 423
                        330
                 ....*....|...
gi 745999857 419 TA-IYSTRIIFYT 430
Cdd:PRK12662 424 LSvIYVWKIVEAL 436
PRK12561 PRK12561
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
40-391 1.16e-20

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 237137 [Multi-domain]  Cd Length: 504  Bit Score: 95.48  E-value: 1.16e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  40 IAYAFTTSLIPStlfifSGQEMIISNWHWmtIQTMKLTLSFKLDYFSMLFVPVALFVTwSIMEFSMWYMHSDPNInqfFK 119
Cdd:PRK12561  22 MCYVFWQHYDPS-----SSSLQLVERYAW--LPQIGLEWSLGVDGLSMPLVLLSGLIT-TLSIFASWKVTRKPRL---FY 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 120 YLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFLLIGWWYGRaDANTAALQAILYNRIGDIgFILTMAWFLMYSN---T 195
Cdd:PRK12561  91 FLMLVLYSAQIGVfLAQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASI-FILVAGLALALSGdtfT 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 196 WDLQQLFILNYDPNLIPL--MGLLLAATGKSAQFGLHPWLPSAM-EGPTPVSallhsstMVVAGIFL------LIRF-YP 265
Cdd:PRK12561 169 FDLAELGAKSYPLALELLlyAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIRFnVQ 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 266 LMENKKIIMSMAL-CLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTI------GINQphlAFLHICNHAFFKAM 338
Cdd:PRK12561 242 MLPDAHVYFAPALaILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIaaftdlGISG---AMLQMISHGLIAAA 318
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 745999857 339 LFMCSGSI---IHNLNneqdIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYS 391
Cdd:PRK12561 319 LFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
PRK12663 PRK12663
Na+/H+ antiporter subunit D;
78-467 3.00e-19

Na+/H+ antiporter subunit D;


Pssm-ID: 237163 [Multi-domain]  Cd Length: 497  Bit Score: 91.16  E-value: 3.00e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  78 LSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNiNQFFKYLLLFLITMLI--LVTANnLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK12663  71 IQFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGR-RYGFPPFILLLMAGVIgsFLTGD-LFNLYVWFEVMLIASFVLI 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 156 GWWyGRADANTAALQAILYNRIGDIGFILTMAwfLMYSNTWDL------QQLFILNYDPNLIPLMGLLLAATG-KSAQFG 228
Cdd:PRK12663 149 TLG-QEREQLRGAIKYVVLNLIGSWLFLLGIG--LLYGTFGTLnmahiaMRLNDMGDTATLTTIALLFLLAFGmKAALFP 225
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 229 LHpWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLM--ENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFST 306
Cdd:PRK12663 226 FM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQV 304
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 307 SSQLGLMMVTIGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHnLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGM 383
Cdd:PRK12663 305 ISSIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGL 383
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 384 PFLTGFYSKDYIIESASTSntNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPTLTYINENNPLLINSIKRLMFGSLF 463
Cdd:PRK12663 384 PPFSGFWGKVLLVQGALDN--GAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIA 461

                 ....
gi 745999857 464 AGFF 467
Cdd:PRK12663 462 MGIA 465
PRK07691 PRK07691
putative monovalent cation/H+ antiporter subunit D; Reviewed
78-428 2.20e-18

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 181085 [Multi-domain]  Cd Length: 496  Bit Score: 88.47  E-value: 2.20e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  78 LSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINqFFKYLLLFLITMLI-LVTANNLFQLFIGWEGVGIMSFLLI- 155
Cdd:PRK07691  71 IVFVADMFAALLVLTSSIITFLVILYSFQTIGIERERY-YYYPSVLFMLAGVNgAFLTGDIFNLFVFFEVMLMASYVLIv 149
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 156 -GwwyGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLF-----ILNYDPNLIPLMGLLLA---ATgKSAQ 226
Cdd:PRK07691 150 iG---GTKIQLRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISvkiaeLSAGQTGLITVVAILFLfvfAT-KAGL 225
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMS--MALCLGAITTLFTAICALTQNDIKKIVAF 304
Cdd:PRK07691 226 FPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFThyLILILALLTIIFGVIGAVAYFDIKKIIIY 305
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 305 STSSQLGLMMVTIGINQPHL---AFLHICNHAFFKAMLFMCSGSIIHnLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALT 381
Cdd:PRK07691 306 NIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAALSLA 384
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 745999857 382 GMPFLTGFYSKDYIIEsASTSNTNAWALTITLIaTSMTAIYSTRIIF 428
Cdd:PRK07691 385 GIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLL-SSLLVLYSVIKIF 429
PRK08601 PRK08601
NADH dehydrogenase subunit 5; Validated
80-351 1.16e-16

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 236310 [Multi-domain]  Cd Length: 509  Bit Score: 83.16  E-value: 1.16e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  80 FKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWY 159
Cdd:PRK08601  68 WHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNK 147
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 160 GRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLF----ILNYDPNLIPLMGLL--LAATGKSAQFGLHPWL 233
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLTSVLsnenLAQLGTWEKTGINLLliLAVMIPAAQWPFQRWL 227
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 234 PSAMEGPTPVSALLHSStMVVAGIFLLIRFYPLMeNKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLM 313
Cdd:PRK08601 228 IESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLF-HDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFM 305
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 745999857 314 MVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLN 351
Cdd:PRK08601 306 LVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN 343
PRK05777 PRK05777
NADH-quinone oxidoreductase subunit NuoN;
79-436 1.87e-16

NADH-quinone oxidoreductase subunit NuoN;


Pssm-ID: 235603 [Multi-domain]  Cd Length: 476  Bit Score: 82.18  E-value: 1.87e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  79 SFKLDYFSMLFVPVALFVTWSIMEFSMWYMhSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWW 158
Cdd:PRK05777  68 MLVVDGFALFLKGLILLASLLALLLARPYL-EDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALR 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 159 YGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLF---ILNYDPNLIPLMGLLLAATG---KSAQFGLHPW 232
Cdd:PRK05777 147 RDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAkalADGSGNSLLLLFGLVFLLVGlafKLSAVPFHMW 226
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 233 LPSAMEG-PTPVSALLHSSTMvVAGIFLLIR-FYPLMENKKIIMSMALCLGAI-TTLFTAICALTQNDIKKIVAFSTSSQ 309
Cdd:PRK05777 227 TPDVYEGaPTPVTAFLATAPK-IAAFAVLLRlLVVAFGGLSEDWQQVLAIIAIaSMLVGNLAALSQTNIKRLLAYSSIAH 305
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 310 LGLMMVTIGINQPH---LAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFL 386
Cdd:PRK05777 306 AGYLLVGLAAGTAEgysAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPT 385
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|.
gi 745999857 387 TGFYSKDYIIESAstSNTNAWALTITLIATSM-TAIYSTRIIFYTLLNQPR 436
Cdd:PRK05777 386 AGFWGKFYVFEAA--VEAGLWWLAVIGVLNSAiGAFYYLRVIKLMYFDEPP 434
PRK08676 PRK08676
hydrogenase membrane subunit; Validated
223-402 2.03e-16

hydrogenase membrane subunit; Validated


Pssm-ID: 181537 [Multi-domain]  Cd Length: 485  Bit Score: 82.11  E-value: 2.03e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 223 KSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFYPLMENKKI---IMSMALCLGAITTLFTAICALTQNDI 298
Cdd:PRK08676 219 KSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAaeqFSNVLIGLGIFSIAVAAFSMLSQRNL 297
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 299 KKIVAFSTSSQLGLMMVTIGINQPHLAF---LHICNHAFFKAMLFMCSGsIIHNLNNEQDIRKMGGLFKAMPFTSSSLII 375
Cdd:PRK08676 298 KKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVIL 376
                        170       180
                 ....*....|....*....|....*...
gi 745999857 376 GSMALTGMPFLTGFYSKDYI-IESASTS 402
Cdd:PRK08676 377 GSAAIIGMPPFPLFLSKFFIlLQLGGIS 404
PRK08042 PRK08042
formate hydrogenlyase subunit 3; Reviewed
229-398 8.12e-16

formate hydrogenlyase subunit 3; Reviewed


Pssm-ID: 181206 [Multi-domain]  Cd Length: 593  Bit Score: 80.64  E-value: 8.12e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMA-LCLGAITTLFTAICALTQNDIKKIVAFSTS 307
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVAlLVLGMITAFVGGLYALMEHNIQRLLAYHTL 278
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 308 SQLGLMMVTIG-------INQPHLAFL-------HICNHAFFKAMLFMCSGSIIHNlNNEQDIRKMGGLFKAMPFTSSSL 373
Cdd:PRK08042 279 ENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAM 357
                        170       180
                 ....*....|....*....|....*
gi 745999857 374 IIGSMALTGMPFLTGFYSKDYIIES 398
Cdd:PRK08042 358 LVGLMAMAALPPLNGFAGEWVIYQS 382
PRK06473 PRK06473
NADH-quinone oxidoreductase subunit M;
110-441 5.47e-15

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 235810 [Multi-domain]  Cd Length: 500  Bit Score: 77.82  E-value: 5.47e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 110 SDPNINQ-FFKYLLLFLITMLIL--VTANNLFQLFIGWEGVGIMSFLLIGWWyGRADANTAALQAILYNRIGDI----GF 182
Cdd:PRK06473  99 SDESIQRpRFYYSLLLLLNAGVSgaFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGIlilvSF 177
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 183 iLTMAWfLMYSNTWDLQQLFI--LNYDPNLIPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFL 259
Cdd:PRK06473 178 -LGLVW-LSGASSFDYEPLRShtLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYG 254
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 260 LIRF--YPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQP---HLAFLHICNHAF 334
Cdd:PRK06473 255 LLRFgvGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPlsiLAAVFQMISHGL 334
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 335 FKAMLFMCSGsIIHNLNNEQDIRKMGGLF---KAMPFTSSSLIIGSMALTGMPFLTGFYSkDYIIESASTSNTNAWALtI 411
Cdd:PRK06473 335 ISALLFLLVG-VVYKKTGSRDVDVLRGLLnpeRGLPITGSLMILGVMASAGIPGMVGFIA-EFLVFRGSFPIFPVQTL-L 411
                        330       340       350
                 ....*....|....*....|....*....|
gi 745999857 412 TLIATSMTAIYstriiFYTLLNQPRFPTLT 441
Cdd:PRK06473 412 CMIGTGLTAVY-----FLLLVNRVFFGRLT 436
PRK12665 PRK12665
putative monovalent cation/H+ antiporter subunit D; Reviewed
213-422 6.71e-14

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237165 [Multi-domain]  Cd Length: 521  Bit Score: 74.62  E-value: 6.71e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 213 LMGLLLAATG-KSAQFGLHPWLP-SAMEGPTPVSA----LLhssTMVvaGIFLLIRFYPLMENKKIIMSMALCLGAITTL 286
Cdd:PRK12665 211 LFAVLLVAFGiKAAVFPLSFWLPdSYPTAPAPVTAvfagLL---TKV--GVYAIIRTHTLLFPGGGLDTLLMVVALLTMV 285
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 287 FTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPH---LAFLHICNHAFFKAMLFMCSGsIIHNLNNEQDIRKMGGLF 363
Cdd:PRK12665 286 VGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLA 364
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 364 KAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTN-AWALTITLIATSMTAIY 422
Cdd:PRK12665 365 KASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAGAEDGTWlAWALVAGGVVTSLLTLY 424
PRK07363 PRK07363
NADH-quinone oxidoreductase subunit M;
71-440 1.22e-13

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 180945 [Multi-domain]  Cd Length: 501  Bit Score: 73.59  E-value: 1.22e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  71 IQTMKLTLSFKLDYFSMLFVPVALFVTWsIMEFSMWYMHSDPNInqFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIM 150
Cdd:PRK07363  66 NEPLGLSYSLGVDGLSLPLLVLNSLLTW-IAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIP 142
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 151 SFLLIGWWYGRADAnTAALQAILYNRIGdiGFILTMAW----FLMYSNTWDLQQLFILNYDPN--LIPLMGLLLAATGKS 224
Cdd:PRK07363 143 FYLLIAIWGGEKRG-YASIKFLIYTAVS--GLLVLAAFlgivWLSGSTSFDYDAISTQNLSLNtqLILLTGLLLGFGIKI 219
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 225 AQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRF----YPlmENKKIIMSMALCLGAITTLFTAICALTQNDIKK 300
Cdd:PRK07363 220 PLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFglqlFP--QTWSLVAPGLAIIGTISVIYGALSAIAQKDIKR 297
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 301 IVAFSTSSQLGLMMVTIGINQPHL---AFLHICNHAFFKAMLFMCSGsIIHNLNNEQDIRKMGGLF---KAMPFTSSSLI 374
Cdd:PRK07363 298 MVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMnpiRGLPLTSALLV 376
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 745999857 375 IGSMALTGMPFLTGFYSkDYIIESASTSnTNAWALTITLIATSMTAIYstriiFYTLLNQPRFPTL 440
Cdd:PRK07363 377 LAGMASAGIPGLVGFVA-EFIVFQGSFS-TFPIPTLLCIVASGLTAVY-----FVILLNRTCFGRL 435
Proton_antipo_N pfam00662
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ...
68-118 3.79e-13

NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.


Pssm-ID: 459895 [Multi-domain]  Cd Length: 51  Bit Score: 63.99  E-value: 3.79e-13
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 745999857   68 WMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFF 118
Cdd:pfam00662   1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
PRK06277 PRK06277
energy conserving hydrogenase EhbF;
243-448 1.38e-11

energy conserving hydrogenase EhbF;


Pssm-ID: 235767 [Multi-domain]  Cd Length: 478  Bit Score: 66.98  E-value: 1.38e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 243 VSALLHSS---TMVVAGIFLLIRFYPLMENKKIIMSMaLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGI 319
Cdd:PRK06277 233 GSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVL-IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLAL 311
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 320 NQPH---LAFLHICNHAFFKAMLFMCSGsIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYII 396
Cdd:PRK06277 312 GTPLgivAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLA 390
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 745999857 397 ESAstSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPTLTYINENNP 448
Cdd:PRK06277 391 QAA--MQANMPELAIIMIIVSIGTFVSMMKAFYLIYLKPKPEELEYKNKKVP 440
ND4 MTH00226
NADH dehydrogenase subunit 4; Provisional
119-389 2.05e-10

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214466 [Multi-domain]  Cd Length: 505  Bit Score: 63.40  E-value: 2.05e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 119 KYLLL-FLITMLIL-------VTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFL 190
Cdd:MTH00226 127 KYLTKsFLICMLILefllyavFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLY 206
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 191 MYSNTWDLQQLFILNYDP----NLIPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIRFYP 265
Cdd:MTH00226 207 NIHGTTDYLTLASCSHVVseqtQKWIFLGIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWP 286
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 266 LME-NKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVT------IGINQPHLAFLhicNHAFFKAM 338
Cdd:MTH00226 287 ILPlGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITlvthdiIGLTGSIFIML---AHGIVSSL 363
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 745999857 339 LFMCSgSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGF 389
Cdd:MTH00226 364 LFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
ndhB CHL00049
NADH dehydrogenase subunit 2
61-482 6.18e-10

NADH dehydrogenase subunit 2


Pssm-ID: 176990 [Multi-domain]  Cd Length: 494  Bit Score: 61.94  E-value: 6.18e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  61 MIISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMH-SDPNINQFFKYLLLFLITMLILVTANNLFQ 139
Cdd:CHL00049  56 ITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLIT 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 140 LFIGWEGVGIMSFLLIGWWYGRADANTAALQAILynrIGDigfilTMAWFLMYSNTW---------DLQQLF--ILNYDP 208
Cdd:CHL00049 136 IFVALECLSLCSYLLSGYTKKDVRSNEATMKYLL---MGG-----ASSSILVYGFSWlyglsggeiELQEIVngLINTQM 207
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 209 --NLIPLMGLLLAATG---KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIR-----FYPLMENKKIIMSMA 277
Cdd:CHL00049 208 ynSPGISIALIFITVGigfKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRifdipFYFSSNEWHLLLEIL 286
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 278 LCLGAITTLFTAIcalTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICNHAFFkaMLFMCSGS----IIHNLNNE 353
Cdd:CHL00049 287 AILSMILGNLIAI---TQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTG 361
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 354 QD-IRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTnaWALTITLIATSMTAIY-STRIIFYTL 431
Cdd:CHL00049 362 TDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGL--YFLVSIGLLTSVISIYyYLKIIKLLM 439
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 745999857 432 LNQPRFPTLTYINENNPLLI--NSIKRLM----FGSLFAGFFMYnniPPMNIPQLTM 482
Cdd:CHL00049 440 TGRNQEITPYVRNYRRSPLRsnNSIELSMivcvIASTIPGISMN---PIIAIAQDTL 493
PRK02546 PRK02546
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
76-421 1.12e-09

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 235050 [Multi-domain]  Cd Length: 525  Bit Score: 60.88  E-value: 1.12e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  76 LTLSFKLDYFSMLFVPVALFVTwSIMEFSMWYMHSDPninQFFKYLLLFLITMLILVTA-NNLFQLFIGWEGVGIMSFLL 154
Cdd:PRK02546  79 LTWSVGADGLSMPLILLTGFIT-TLAVLAAWPVTFKP---KLFYFLMLAMYGGQIAVFAvQDMLLFFLAWELELIPVYLL 154
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 155 IGWWYGRaDANTAALQAILYNRIGDIgFIL----TMAwFLMYSNTWDLQQLFILNYDPNLIPLM--GLLLAATGKSAQFG 228
Cdd:PRK02546 155 LAIWGGK-KRQYAATKFILYTAGSSL-FILlaalAMA-FYGDTPTFDMTALAAKDFGLGFQLLCyaGLLIAYGVKLPIVP 231
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 229 LHPWLPSAM-EGPTPVSALLhsstmvvAGIFLLIRFYPLMENKKIIMSMA--------LCLGAITTLFTAICALTQNDIK 299
Cdd:PRK02546 232 LHTWLPDAHgEATAPVHMLL-------AGILLKMGGYALLRMNAGMLPDAhaqfapllIVLGVVNIIYAALTSFAQRNLK 304
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 300 KIVAFSTSSQLGLMMVTIGINQP---HLAFLHICNHAFFKAMLFMCSGSI---IHNLNNEQdirkMGGLFKAMP-----F 368
Cdd:PRK02546 305 RKIAYSSISHMGFVLIGIGSFTDlgtSGAMLQMISHGLIGASLFFLVGATydrTHTLMLDE----MGGVGQKMRkmfamW 380
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 745999857 369 TSSSLiiGSMALTGMpflTGFYSKDYIIESASTSntNAWALTITLIATSMTAI 421
Cdd:PRK02546 381 TACSL--ASLALPGM---SGFVAELMVFVGFATS--DAYTLPFRVVVVFLAAV 426
ND4 MTH00204
NADH dehydrogenase subunit 4; Provisional
44-423 2.22e-09

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 164750 [Multi-domain]  Cd Length: 485  Bit Score: 60.08  E-value: 2.22e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  44 FTTSLIPSTLFIFSGQEMIISNWHWMTIQTMKL---TLSFKLDYFSMLF-------VPVALFVTWSIMEFsmwymhsdpn 113
Cdd:MTH00204  40 LFSTLVLWGAFDGEGQFQFINLIEWIISPTLNFqwgPLVFAVDGVSLFFillttllIPICILISWKSIKF---------- 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 114 INQFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMawFLMY 192
Cdd:MTH00204 110 LFKEFLLCLLFLEVLLIGVfSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGI--FQLY 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 193 SNTWDLQQLFILN----YDPNLIPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LI 261
Cdd:MTH00204 188 SITGTTDYQILLNiklpLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVIL-------AGILLklggygFL 260
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 262 RF-YPLM-ENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLmmVTIGINQPHL-----AFLHICNHAF 334
Cdd:MTH00204 261 RFsWPLFpAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGL--VPLGLFTHTIeglvaAVFLMLAHGF 338
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 335 FKAMLFMCSgSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTnawaLTITLI 414
Cdd:MTH00204 339 VSSALFIAV-TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSL----GLGVLV 413
                        410
                 ....*....|.
gi 745999857 415 ATSM--TAIYS 423
Cdd:MTH00204 414 TSGMvwSAAYS 424
ND4 MTH00217
NADH dehydrogenase subunit 4; Provisional
44-319 4.42e-09

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214462 [Multi-domain]  Cd Length: 482  Bit Score: 58.91  E-value: 4.42e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  44 FTTSLIPSTLFIFSGQEMIISNWHWM-TIQTMKLTLSFKLDYFSMLFV-------PVALFVTWSIMEFSmwymhsdpnIN 115
Cdd:MTH00217  39 LTATILLWASFDGEGQFQAIKKFEWIpGIEPVFGPVVFAVDGISIFFLiltalltPICILISWNSIKFL---------IK 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 116 QFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIgFILtMAWFLMYSN- 194
Cdd:MTH00217 110 EFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSV-FML-LGIFTLYSYa 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 195 -TWDLQQLFILNYDPNL--IPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIRF- 263
Cdd:MTH00217 188 gTTDYQALCCLKIEKELqyFIFLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVIL-------AGVLLklggygFIRFs 260
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 745999857 264 YPLM-ENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLmmVTIGI 319
Cdd:MTH00217 261 WPLLpEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGL--VTLGI 315
ndhD CHL00011
NADH dehydrogenase subunit 4
131-383 1.96e-08

NADH dehydrogenase subunit 4


Pssm-ID: 176954 [Multi-domain]  Cd Length: 498  Bit Score: 56.88  E-value: 1.96e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 131 LVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADAnTAALQAILYNRIGDIGF---ILTMAWFLMYSNTWDLQQLFILNYD 207
Cdd:CHL00011 128 LFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRL-YSATKFILYTAGGSIFLligVLGMGLYGSNEPTLNFETLANQSYP 206
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 208 PNL--IPLMGLLLAATGKSAQFGLHPWLPSamegpTPVSAllHSST-MVVAGIFL------LIRF-YPLMENKKIIMSMA 277
Cdd:CHL00011 207 VALeiLFYIGFLIAYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRInMELLPHAHSIFSPW 279
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 278 LCL-GAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIG-INQPHL--AFLHICNHAFFKAMLFMCSGSI---IHNL 350
Cdd:CHL00011 280 LVIvGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGsITDTGLngAILQIISHGFIGAALFFLAGTSydrIRLV 359
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 745999857 351 NNEQdirkMGGLFKAMP--FTS-SSLIIGSMALTGM 383
Cdd:CHL00011 360 YLDE----MGGIAIPMPkiFTMfSSFSMASLALPGM 391
PRK02504 PRK02504
NAD(P)H-quinone oxidoreductase subunit N;
68-422 3.39e-08

NAD(P)H-quinone oxidoreductase subunit N;


Pssm-ID: 235044 [Multi-domain]  Cd Length: 513  Bit Score: 56.21  E-value: 3.39e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  68 WMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYM-HSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEG 146
Cdd:PRK02504  62 WDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYVeQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLET 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 147 VGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAwfLMYSNTWDLQQLFI----LNYDPNLIPLMGLLLAATG 222
Cdd:PRK02504 142 LSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSS--LLYGLSGGSTQLSAialaLITSPSLGLALALVFVIAG 219
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 223 ---KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFyplmenkkiimsMALCLGAITT----LFTA----- 289
Cdd:PRK02504 220 iafKISAVPFHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRL------------LVTAFPSFDEqwklLFTAlails 286
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 290 -----ICALTQNDIKKIVAFSTSSQLGLMMvtIGInqphlaflhICN-HAFFKAM-------LFMCSGS----IIHNLNN 352
Cdd:PRK02504 287 mvlgnVVALAQTSMKRMLAYSSIGQAGFVM--IGL---------VAGtEAGYASMvfyllayLFMNLGAfacvILFSLRT 355
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 745999857 353 EQD-IRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSntNAWALTITLIATSMTAIY 422
Cdd:PRK02504 356 GTDqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQA--GLYLLVLVGLVTSVISIY 424
ND2 MTH00200
NADH dehydrogenase subunit 2; Provisional
121-468 1.56e-07

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177246 [Multi-domain]  Cd Length: 347  Bit Score: 53.82  E-value: 1.56e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 121 LLLFLITMLILvTANNLFQLFIGWEgVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQ 200
Cdd:MTH00200  11 LSLGLGTLLTF-SSSHWFLIWLGLE-INTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISE 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 201 LFilnydpNLIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENkkiimSMALCL 280
Cdd:MTH00200  89 ML------GPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNS-----NILLLL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 281 GAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINqPHLAFLHicnhaFFKAMLFMCSGSIIHNLNNEQDIRKMG 360
Cdd:MTH00200 158 GLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLY-----LLLYVIITLTVFLLLNLLNSTKINSLS 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 361 GLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIeSASTSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPTL 440
Cdd:MTH00200 232 SSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-QELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQIN 310
                        330       340
                 ....*....|....*....|....*...
gi 745999857 441 TYINENNPLLINSIKRLMFGSLFAGFFM 468
Cdd:MTH00200 311 MMSSWRTKSNSNLLVGLLLLLSILGLPL 338
ND2 MTH00112
NADH dehydrogenase subunit 2; Provisional
191-413 3.06e-07

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214423 [Multi-domain]  Cd Length: 346  Bit Score: 52.90  E-value: 3.06e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 191 MYSNTWDLQQLfilnydPNLIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMeNK 270
Cdd:MTH00112  79 WNTGQWDITQL------TNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSL-NP 151
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 271 KIIMSMALclgaITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINqPHLAFLhicnhAFFKAMLFMCSGSIIHNL 350
Cdd:MTH00112 152 TLLLTLAI----LSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLL-----TFYIYILMTTPMFLTLNT 221
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 745999857 351 NNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITL 413
Cdd:MTH00112 222 TSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAM 284
ND4 MTH00206
NADH dehydrogenase subunit 4; Provisional
76-423 3.34e-07

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214458 [Multi-domain]  Cd Length: 450  Bit Score: 53.02  E-value: 3.34e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  76 LTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQ-FFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFL 153
Cdd:MTH00206  51 SNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRQrIYITLLIVLQLFLILFfSSSNLLLFYILFEASLIPTLL 130
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 154 LIGWWYGRADANTAALQAILYNRIGDIGFILTMAW--FLMYSNTWDLQQLFILNYDPNLIPLMGLLLAATGKSAQFGLHP 231
Cdd:MTH00206 131 LITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFlqNSLGSLSLYILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHL 210
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 232 WLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFYPLMENKKIIMSMALC-LGAITTLFTAICALTQNDIKKIVA 303
Cdd:MTH00206 211 WLPKAhVEAPV-------AGSMVLAGVLLklggygMMRIILILGPSTKLSSYFFIiLGLWGSIMTSSICLRQTDLKSLIA 283
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 304 FSTSSQLGLMMVTIGINQP---HLAFLHICNHAFFKAMLFmCSGSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMAL 380
Cdd:MTH00206 284 YSSVSHMSLVTAGILSGSPwgfKGALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLAN 362
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 745999857 381 TGMPFLTGFYSKDYIIESASTSNTnaWALTITLIATSMTAIYS 423
Cdd:MTH00206 363 LGLPPFPNLFGELLIITSLFSWSN--FTLPLLGLGFLFTAIYS 403
ND4 MTH00014
NADH dehydrogenase subunit 4; Validated
38-321 5.15e-07

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214399 [Multi-domain]  Cd Length: 452  Bit Score: 52.44  E-value: 5.15e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  38 SSIAYAFTTSLIPSTLFIFSgqEMIISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQF 117
Cdd:MTH00014  15 PLIKYPWSWALTFSTLLLLS--LFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTF 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 118 FKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWd 197
Cdd:MTH00014  93 MTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSL- 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 198 lqQLFILNYDPNLIPLMGL-----LLAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRF-Y 264
Cdd:MTH00014 172 --SMLMSSMEPPSIYLMNLwwlitILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMsS 242
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 745999857 265 PLMENKK----IIMSMALCLGAITTLftaICaLTQNDIKKIVAFSTSSQLGLMMVTIGINQ 321
Cdd:MTH00014 243 LFMHINKslsaPFSSISLVGAVITSL---IC-IRQPDLKSLIAYSSVGHMGLMTAGIMSNT 299
PRK06459 PRK06459
hydrogenase 4 subunit B; Validated
82-318 6.99e-07

hydrogenase 4 subunit B; Validated


Pssm-ID: 235806 [Multi-domain]  Cd Length: 585  Bit Score: 52.10  E-value: 6.99e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  82 LDYFSMLFVPVALFVTWsimeFSMWYMHSDPNINQFFKYLLLfliTMLILVTANNLFQLFIGWEGVGIMSFLLIGWWygr 161
Cdd:PRK06459  46 LSFFSIISTIVWILASL----YSIEYDHYGKWLSSLYILTIL---GMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT--- 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 162 ADANTAALQAILYNRIGDIGFILTMAWFLMYSNTwdlqqlFILNYDPNLIPLMGLLLAATGKSAQFGLH--PWLPSAM-E 238
Cdd:PRK06459 116 KKNKRPAFVFMAFGELSTVLILAGFAWAFIISGT------TNFSYLPSPVPLILASFGFIIKMGMMPFLvsEWLPIAHgN 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 239 GPTPVSALLhSSTMVVAGIFLLIRFYPLMENKKI--IMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVT 316
Cdd:PRK06459 190 APSNFSAIL-SATMTLMGVYGILKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVA 268

                 ..
gi 745999857 317 IG 318
Cdd:PRK06459 269 LG 270
PRK12664 PRK12664
putative monovalent cation/H+ antiporter subunit D; Reviewed
275-405 1.12e-06

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237164 [Multi-domain]  Cd Length: 527  Bit Score: 51.65  E-value: 1.12e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 275 SMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPH-----LAFLHICNHAFFKAMLFMCSGSIIhN 349
Cdd:PRK12664 202 EILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVI-N 280
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 745999857 350 LNNEQDIRKMGGLFKaMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTN 405
Cdd:PRK12664 281 RTRKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLT 335
ND4 MTH00044
NADH dehydrogenase subunit 4; Validated
43-449 2.56e-06

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214411 [Multi-domain]  Cd Length: 458  Bit Score: 50.36  E-value: 2.56e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  43 AFTTSLIPSTLFIFSGQEMIISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFsmwymHSDPNINQFFKYLL 122
Cdd:MTH00044  27 SISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSN-----NSPNNQRTFISLII 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 123 LFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLF 202
Cdd:MTH00044 102 IILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSE 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 203 ILNYDPNLIPLMGL-----LLAATGKSAQFGLHPWLPSA-MEGPTPVSallhsstMVVAGIFL------LIR-----FYP 265
Cdd:MTH00044 182 LNWLTSLSSNSSSIwwifcILAFLVKMPIYGFHLWLPKAhVEAPVAGS-------MILAAILLklggygLIRlinlfSLP 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 266 LMENKKIIMSMALCLGAittLFTAICALTQNDIKKIVAFSTSSQLGLMMVTI------GINQphlAFLHICNHAFFKAML 339
Cdd:MTH00044 255 SANNISFILIVFCCWGA---LITSIICLRQTDLKALIAYSSVGHMSLVAAGIfsgtnwGING---ALILMIAHGLVSSAL 328
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 340 FmCSGSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIesASTSNTNAWALTITLIATSMT 419
Cdd:MTH00044 329 F-CLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLII--SSIISWSILSFPIIGLATVFG 405
                        410       420       430
                 ....*....|....*....|....*....|
gi 745999857 420 AIYSTRIifYTLLNQPRFPtlTYINENNPL 449
Cdd:MTH00044 406 AIYSLLI--YQLTNSGSFP--SWISNVSPI 431
ND2 MTH00196
NADH dehydrogenase subunit 2; Provisional
230-470 2.99e-06

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214453 [Multi-domain]  Cd Length: 365  Bit Score: 49.64  E-value: 2.99e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 230 HPWLPSAMEG-PTPVSALLhsSTMVVAGIFLLIRFYPLMENkkiimsMALCLGAITTLFTAICALTQNDIKKIVAFSTSS 308
Cdd:MTH00196 115 HMWAPDVYEGaPTKTTALL--AIVPKLGIFSILVSIGLNVN------ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIG 186
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 309 QLGLMMVTIGIN-----QPHLAFLhicnhaFFKAMLFMCSGSIIHNLNNEQD-IRKMGGLFKAMPFTSSSLIIGSMALTG 382
Cdd:MTH00196 187 HMGFVLWGIEIGsfesiQASLVYL------FIYIIMSICVFSIILALNVYKNlIIEFSGLSRRLPILAITLALTFLSIAG 260
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 383 MPFLTGFYSKDYIIESASTSNTNAWALtITLIATSMTAIYSTR---IIFYTLLNQPRFPTLTYINENNPLLINSIkRLMF 459
Cdd:MTH00196 261 IPPLVGFLGKWLILLSGVVYQYYLIFL-LAVFCSVIAGVYYVRivkILFFQANSFLLISTKILKKENKINLRKAL-LIGF 338
                        250
                 ....*....|.
gi 745999857 460 GSLFAGFFMYN 470
Cdd:MTH00196 339 SLYLILFTILS 349
ND4 MTH00163
NADH dehydrogenase subunit 4; Provisional
61-317 3.29e-06

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214443 [Multi-domain]  Cd Length: 445  Bit Score: 49.77  E-value: 3.29e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  61 MIISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTwSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILV-TANNLFQ 139
Cdd:MTH00163  33 FLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWIC-MLMILSSESVYKKNNYSNLFLFLILFLLIFLLLTfSSMNLLL 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 140 LFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLqQLFILNYDPNLIPLMGLLLA 219
Cdd:MTH00163 112 FYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSF-FLLNFFGSLNFLWYLSMILA 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 220 ATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFYPLMENKKIIMS-MALCLGAITTLFTAIC 291
Cdd:MTH00163 191 FLVKMPMFFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLLRVMSFFSKLGLKFNyIWISISLVGGVIVSLI 263
                        250       260
                 ....*....|....*....|....*.
gi 745999857 292 ALTQNDIKKIVAFSTSSQLGLMMVTI 317
Cdd:MTH00163 264 CLRQVDLKSLIAYSSVAHMGLVLGGL 289
ND4 MTH00150
NADH dehydrogenase subunit 4; Provisional
80-313 1.01e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214435 [Multi-domain]  Cd Length: 417  Bit Score: 44.83  E-value: 1.01e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  80 FKLDYFSMLFVPVALFVTwSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFLLIGWW 158
Cdd:MTH00150  20 FSVDSMSSLLISLSLWIS-GLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAfSVSSLLMFYFFFEASLIPTLLLILGW 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 159 YGRADAntaaLQAILYNRIGDIG------FILTMAWFLMYSNTWDLQQLFILNYDPNLIPLMGLLLAATGKSAQFGLHPW 232
Cdd:MTH00150  99 GYQPER----LQAGMYMMLYTVGaslpllLVILWMSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLW 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 233 LPSA-MEGPTpvsallhSSTMVVAGIFL------LIRF-----YPLMENKKIIMSMALCLGAITTLftaICaLTQNDIKK 300
Cdd:MTH00150 175 LPKAhVEAPV-------AGSMILAGILLklggygILRMmmvfsLSSSSFSIFLISLSLWGGVLTSL---IC-LRQSDVKS 243
                        250
                 ....*....|...
gi 745999857 301 IVAFSTSSQLGLM 313
Cdd:MTH00150 244 LIAYSSVGHMSLV 256
ND2 MTH00144
NADH dehydrogenase subunit 2; Provisional
227-422 1.67e-04

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214432 [Multi-domain]  Cd Length: 328  Bit Score: 44.11  E-value: 1.67e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMalclGAITTLFTAICALTQNDIKKIVAFST 306
Cdd:MTH00144 101 FPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCVI----SVLSALVGSIGGLNQTQVRALLAYSS 176
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 307 SSQLGLMMVTIGINQPHL---AFLHICNHAFFKAMLFMCSGSIIHNLNNEqdirkmgglfKAMPFTSSSLIIGSMALTGM 383
Cdd:MTH00144 177 ISHTGWMLVAILHGSWLMwmyFLIYIVSSGFLFFSLWSGDSGSMKDLGSL----------KPSYKTGLSIISLLLSLGGL 246
                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 745999857 384 PFLTGFYSKDYIIESASTSntNAWALTITLIATSMTAIY 422
Cdd:MTH00144 247 PPFLGFCSKLLVLISSMES--SPLLLILLLLLGSLISLF 283
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
87-449 3.24e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 43.41  E-value: 3.24e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857  87 MLFVPVALFVTW----SIMEFSMWYMHSDPNINQFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFLLIGWWYGR 161
Cdd:MTH00127  61 PLSTPLLVLTCWllplMILASQNHTAPEPINRQRMYITLLTSLQIFLILAfGATEIIMFYVMFEATLIPTLIIITRWGNQ 140
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 162 ADANTAALQAILYNRIGDIGfiLTMAWFLMYSNTWDLQQLFILNYDP-------NLIPLMGLLLAATGKSAQFGLHPWLP 234
Cdd:MTH00127 141 TERLNAGTYFLFYTLAGSLP--LLVALLLLQNSTGTLSMLTLQYSQPlqlsswaDKLWWAGCLLAFLVKMPLYGVHLWLP 218
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 235 SA-MEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLM 313
Cdd:MTH00127 219 KAhVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLV 298
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 314 MVTIGINQPHL---AFLHICNHAFFKAMLFmCSGSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFY 390
Cdd:MTH00127 299 AGGILIQTPWGftgALILMIAHGLTSSALF-CLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLM 377
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 745999857 391 SKDYIIesASTSNTNAWALTITLIATSMTAIYStriiFYTLLNQPRFPTLTYINENNPL 449
Cdd:MTH00127 378 GELMII--TSLFNWSPWTLALTGLGTLITAGYS----LYMFLMTQRGPLPDHIIALNPS 430
ND2 MTH00011
NADH dehydrogenase subunit 2; Validated
211-442 9.26e-04

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 164587 [Multi-domain]  Cd Length: 330  Bit Score: 41.69  E-value: 9.26e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 211 IPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMenkkiIMSMALCLGAITTLFTAI 290
Cdd:MTH00011  89 ITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHN-----ILPMMTSMAAMSALAGGL 163
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 291 CALTQNDIKKIVAFSTSSQLGLMMVtIGINQPHLAFLHICNHAFFKAMLFMcsgsiIHNLNNEQDIRKMGGLFKAMPFTS 370
Cdd:MTH00011 164 GGMNQTQLRPLLAYSSIGHMGWMTM-ISVFSPSMAILYFMTYIIITTPLML-----LFAYLNAFSTKFNSKISSMSQTTS 237
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 745999857 371 SSLIIGSMALTGMPFLTGFYSKDYIIESAsTSNTNAWALTITLIATSMTAIYSTRIIFYTLLNQPRFPTLTY 442
Cdd:MTH00011 238 MSLFIMLLSLGGLPPFTGFMPKLMAIETL-TSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSLKS 308
ND2 MTH00070
NADH dehydrogenase subunit 2; Provisional
194-415 2.02e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177142 [Multi-domain]  Cd Length: 346  Bit Score: 40.67  E-value: 2.02e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 194 NTWDLQQLFILNYdPNLIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMeNKKII 273
Cdd:MTH00070  77 NAWFTGEWTIMNM-QTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLL-NSNLL 154
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 274 MSMALclgaITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINqPHLAFLHICNHAFFKAMLFMCSGSIihnlnNE 353
Cdd:MTH00070 155 IIMGL----LSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFLMLMNL-----NS 224
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 745999857 354 QDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIA 415
Cdd:MTH00070 225 TNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSA 286
ND2 MTH00041
NADH dehydrogenase subunit 2; Validated
209-433 7.16e-03

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 177116 [Multi-domain]  Cd Length: 349  Bit Score: 39.14  E-value: 7.16e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 209 NLIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFyplmeNKKIIMSMALCLGAITTLFT 288
Cdd:MTH00041  91 NTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISI-----SNLLNSNILILCGILSVLVG 165
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 289 AICALTQNDIKKIVAFSTSSQLGLMMVTIGINqPHLAFLHICNHAFFKAMLFmcsgsIIHNLNNEQDIRKMGGLFKAMPF 368
Cdd:MTH00041 166 GWGGLNQTQTRKILAFSSIAHLGWIIITSAYS-PNASIIMFLIYIIINTSIF-----LIGNNFSLSTLSHLNKLSQLNPI 239
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 745999857 369 TSSSLIIGSMALTGMPFLTGFYSKDYIIEsaSTSNTNAWALTITLIATSMTAIY-STRIIFYTLLN 433
Cdd:MTH00041 240 SAFLFILSILSLGGLPPLTGFLNKFISLY--CLIQNNSILISIILIIGSLLSLFfYLRISFNTSLT 303
ND2 MTH00105
NADH dehydrogenase subunit 2; Provisional
190-432 9.17e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177167 [Multi-domain]  Cd Length: 347  Bit Score: 38.67  E-value: 9.17e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 190 LMYSNTWDLQQLFilnydpNLIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMeN 269
Cdd:MTH00105  78 LMYSGQWTITKLT------NPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSI-N 150
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 270 KKIIMSMALclgaITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINqPHLAFLHICNHAFFKAMLFMcsgsiIHN 349
Cdd:MTH00105 151 PNLLLTLAI----LSILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYN-PTLTLLNLLIYIIMTLTMFM-----LLM 220
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999857 350 LNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESAsTSNTNAWALTITLIATSMTAIYSTRIIFY 429
Cdd:MTH00105 221 LNSSTTTLSLSHTWNKTPLMTSLILLTLLSLGGLPPLTGFMPKWMIIQEL-TKNNNIILPTLMAITALLNLYFYMRLIYS 299

                 ...
gi 745999857 430 TLL 432
Cdd:MTH00105 300 TSL 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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