|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-571 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 704.98 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 1 MCSLSFFSLFFSSTLLFILGIYYLLFDYSVFVEWELFNLNGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGES 80
Cdd:MTH00165 3 MCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 81 NMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLNFG 160
Cdd:MTH00165 83 NINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 161 SWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNF 240
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 241 GWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDT 320
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 321 QDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSG 400
Cdd:MTH00165 323 QDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 401 DNNFYSSFSFNDKSYYISFGMIFLLIVAVFGGSFLSWLIFPVPYMISLPYYLKFLTMFVVLLGGYLGYLISEMNLSRVLF 480
Cdd:MTH00165 403 DFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLK 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 481 SLSGLSFVSFVGSMWFMPFLSTKLISYFPLKYGYLSSKSFDYGWGELFGGQGIYNLFIYLIEYIQGWYDSNFKIYLLTFI 560
Cdd:MTH00165 483 SLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFL 562
|
570
....*....|.
gi 761546112 561 FWMLFLVIYFY 571
Cdd:MTH00165 563 LWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
18-570 |
5.55e-175 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 506.69 E-value: 5.55e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 18 ILGIYYLLFDYSVFVEWELFNLNGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMG 97
Cdd:MTH00151 20 PLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMN 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 98 FLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDFisdsFEM 177
Cdd:MTH00151 100 LLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILSMWDF----KLS 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 178 SLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYN-FGWFLLIIGCMTMFMAG 256
Cdd:MTH00151 176 GWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSgFSSFLLFISLLTLLMAG 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 257 LGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLT 336
Cdd:MTH00151 256 ISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLT 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 337 SVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYY 416
Cdd:MTH00151 336 SGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFY 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 417 ISFGMIFLLIVAVFGGSFLSWLIFPVPYMISLPYYLKFLTMFVVLLGGYLGYLISEMNLSRVLFSLSGlsfvSFVGSMWF 496
Cdd:MTH00151 416 VSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKLS----FFFSSMWF 491
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 761546112 497 MPFLSTKLISYFPLKYGYLSSKSFDYGWGELFGGQGIYNLFIYLIEYIQGWYDSNFKIYLLTFIFWMLFLVIYF 570
Cdd:MTH00151 492 LSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
21-570 |
1.11e-173 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 503.41 E-value: 1.11e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 21 IYYLLFDYSVFVEWELFNLNGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLI 100
Cdd:MTH00209 21 VIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 101 ISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNyIYYYDFISDSfeMSLI 180
Cdd:MTH00209 101 FVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-IFYLNFNSNL--GSVI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 181 TVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLN-LYNFGWFLLIIGCMTMFMAGLGA 259
Cdd:MTH00209 178 SVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFsSPFFSMSLLLLGSLTTLMASMSA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 260 NFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVC 339
Cdd:MTH00209 258 NVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSIC 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 340 FNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYYISF 419
Cdd:MTH00209 338 LNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLK 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 420 GMIFLLIVAVFGGSFLSWLIFPVPYMISLPYYLKFLTMFVVLLGGYLGYLISEMNlsrvLFSLSGLSFVSFVGSMWFMPF 499
Cdd:MTH00209 418 PMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKN----FFLIKGYKVNYFLSQMWFLPD 493
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 761546112 500 LSTKLISYFPLKYGYLSSKSFDYGWGELFGGQGIYNLFIYLIEYIQGWYDSNFKIYLLTFIFWMLFLVIYF 570
Cdd:MTH00209 494 LSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVILFM 564
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
18-570 |
1.81e-166 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 485.42 E-value: 1.81e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 18 ILGIYYLLFDYSVFVEWELFNLNGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMG 97
Cdd:MTH00207 23 PLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMN 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 98 FLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDfisdSFEM 177
Cdd:MTH00207 103 MLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSITNMWQ----TDMN 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 178 SLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLN-LYNFGWFLLIIGCMTMFMAG 256
Cdd:MTH00207 179 NYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSsTYWFNPALLLTASLTMLMAG 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 257 LGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLT 336
Cdd:MTH00207 259 LSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLT 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 337 SVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYY 416
Cdd:MTH00207 339 TSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDKS 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 417 ISFGMIFLLIVAVFGGSFLSWLIFPVPYMISLPYYLKFLTMFVVLLGGYLGYLISEMNLSRVLFSLSGLSFVSFVGSMWF 496
Cdd:MTH00207 419 LTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPLSHFASCLMWF 498
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 761546112 497 MPFLSTKLISYFPLKYGYLSSKSFDYGWGELFGGQGIYNLFIYLIEYIQGWYDSNFKIYLLTFIFWMLFLVIYF 570
Cdd:MTH00207 499 LVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTIIIIMT 572
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
29-570 |
3.96e-120 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 367.35 E-value: 3.96e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 29 SVFVEWELFNLNGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISI 108
Cdd:MTH00211 56 TILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 109 LLGWDGLGLVSYCLVIYYQNVSSYSAGMLTAL-SNRIGDVAILISIAWML-NFGSWNYIYYYDFisdSFEMSLITVLIIL 186
Cdd:MTH00211 136 FIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlNLNSWEISQLFIL---NLDLTLFLLGLLL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 187 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM-LNLYNFGWFLLIIGCMTMFMAGLGANFEFDL 265
Cdd:MTH00211 213 AAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLfQNNQLILGAVLLLGALTMLFGALCALTQNDI 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 266 KKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSL 345
Cdd:MTH00211 293 KKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSL 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 346 SLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLL 425
Cdd:MTH00211 373 ALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLA 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 426 IVAVFGGSFLSWLIFPVPYMI-SLPYYLKFLTMFVVLLGGYLGyliseMNLSRVLFSLSGLSFVSFVGSMWFMPFLSTKL 504
Cdd:MTH00211 453 LGSILAGFIITSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLG-----LELVNLTHKQLKTSTLSFSNMLGYYPPIIHRL 527
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 761546112 505 ISYFPLKYG-YLSSKSFDYGWGELFGGQGIYNLFIYLIEYIQGWYDSNFKIYLLTFIFWMLFLVIYF 570
Cdd:MTH00211 528 LPKLSLKWGqTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLF 594
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
18-568 |
9.21e-100 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 315.37 E-value: 9.21e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 18 ILGIYYLLFD----YSVFVEWelFNLNGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFI 93
Cdd:MTH00208 71 INLLIWILLGcpniNISLSNW--LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 94 LSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGMLTA-LSNRIGDVAILISIAW-MLNFGSWNYIYYYDFI 171
Cdd:MTH00208 149 LNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLINFNSWNLNEILSLN 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 172 S-DSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNlyNFGWFL---LII 247
Cdd:MTH00208 229 NsNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLIS--NSPWFLslcLIL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 248 GCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMG 327
Cdd:MTH00208 307 GSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMG 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 328 SIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSS 407
Cdd:MTH00208 387 GLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPL 466
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 408 FSFNDKSYYISFGMIFLLIVAVFGGSFLSWLIFPVPyMISLPYYLKFLTMFVVLLGGYLGYLISeMNLSRVLFSLSGLSF 487
Cdd:MTH00208 467 SPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSFSFL-LSLSSNPINSNFFSF 544
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 488 VSFvgsMWFMPFLSTKLISYFPLKYG-YLSSKSFDYGWGELFGGQGIYNLFIYLIEYIQGWYDSNFKIYLLTFIFWMLFL 566
Cdd:MTH00208 545 LSN---QWFFVNISHSIIISFSFFTSlFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLI 621
|
..
gi 761546112 567 VI 568
Cdd:MTH00208 622 LT 623
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
34-470 |
1.78e-98 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 311.32 E-value: 1.78e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 34 WELFNLNGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWD 113
Cdd:COG1009 62 YTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 114 GLGLVSYCLVIYYQNVSSYSAGMLTA-LSNRIGDVAILISIAWMLN-FGSWNY---IYYYDFISDSFEMSLITVLIILAA 188
Cdd:COG1009 142 LVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTLNFselLAAAPTILSSPLLTLILLLLLLGA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 189 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNF-GWFLLIIGCMTMFMAGLGANFEFDLKK 267
Cdd:COG1009 222 FGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVwLTVVAIIGAITALFAALIALAQTDIKR 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 268 IIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLkDTQDIRFMGSIVYFMPLTSVCFNVSSLSL 347
Cdd:COG1009 302 VLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSL 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 348 CGLPFLAGFYSKDLILE-LVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLLI 426
Cdd:COG1009 381 AGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAV 460
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 761546112 427 VAVFGGSFLSWL---------IFPVPYMISLPYYLKFLTMFVVLLGGYLGYLI 470
Cdd:COG1009 461 LSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
34-570 |
2.03e-98 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 311.33 E-value: 2.03e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 34 WELFNLNGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWD 113
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 114 GLGLVSYCLVIYYQNVS-SYSAGMLTALSNRIGDVAILISIAWM-LNFGSWNYiyyyDFISDSFEMSLITVL-IILAAMT 190
Cdd:MTH00004 146 GVGIMSFLLIGWWSGRAeANTAALQAIIYNRIGDIGLILSMAWLaMTLNTWEI----QQLFSPTQTPTLPLLgLILAATG 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFL-LIIGCMTMFMAGLGANFEFDLKKII 269
Cdd:MTH00004 222 KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTIcLCLGALTTLFAATCALTQNDIKKII 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 270 ALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCG 349
Cdd:MTH00004 302 AFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMG 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 350 LPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLLIVAV 429
Cdd:MTH00004 382 TPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSI 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 430 FGGSFLSWLIFPV-PYMISLPYYLKFLTMFVVLLGGYLGYLISEMNLSRVLFSLSGLSfvSFVGSMWFMPFLSTKLISYF 508
Cdd:MTH00004 462 LAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLH--NFSNQLAFFNPLTHRLLPMT 539
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 761546112 509 PLKYGY-LSSKSFDYGWGELFGGQGIYNLFIYLIEYIQGWYDSNFKIYLLTFIFWMLFLVIYF 570
Cdd:MTH00004 540 LLKSSQkIATHLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSFALTILLLLLLT 602
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
29-570 |
4.66e-94 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 299.90 E-value: 4.66e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 29 SVFVEWELFNLNGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISI 108
Cdd:MTH00066 59 SITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 109 LLGWDGLGLVSYCLV-IYYQNVSSYSAGMLTALSNRIGDVAILISIAW-MLNFGSWNYIYYydFISDSFEMSLITVLIiL 186
Cdd:MTH00066 139 FIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWELQQI--FLLNDNSTLPLLGLI-L 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 187 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-NLYNFGWFLLIIGCMTMFMAGLGANFEFDL 265
Cdd:MTH00066 216 AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLeNNQTALTICLCLGALTTLFTAACALTQNDI 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 266 KKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSL 345
Cdd:MTH00066 296 KKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSL 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 346 SLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLL 425
Cdd:MTH00066 376 ALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLA 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 426 IVAVFGGSFLSWLIFPVPYMI-SLPYYLKFLTMFVVLLGGYLGYLISEMNLSRVLFSLSglsfVSFVGSMWFMPFLSTKL 504
Cdd:MTH00066 456 WGSIIAGLLIIFNILPMKPQIlTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKM----HSFSNLLAFFPTIIHRL 531
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 761546112 505 ISYFPLKYGY-LSSKSFDYGWGELFGGQGIYNLFIYLIEYIQGWYDSNFKIYLLTFIFWMLFLVIYF 570
Cdd:MTH00066 532 SPKTNLNSGQnIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLILL 598
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
46-463 |
3.02e-87 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 282.13 E-value: 3.02e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 46 MTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-I 124
Cdd:MTH00108 78 LSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 125 YYQNVSSYSAGMLTALSNRIGDVAILISIAW-MLNFGSWNYIYYydFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPA 203
Cdd:MTH00108 158 WYGRTDANTAALQAILYNRIGDIGFILAMAWfLLNLNSWDLQQI--FMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPS 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 204 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFL-LIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS 282
Cdd:MTH00108 236 AMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLtLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 283 ILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLI 362
Cdd:MTH00108 316 TIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLI 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 363 LELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLLIVAVFGGSFLSWLIFP- 441
Cdd:MTH00108 396 IEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPt 475
|
410 420
....*....|....*....|...
gi 761546112 442 -VPYMiSLPYYLKFLTMFVVLLG 463
Cdd:MTH00108 476 tIPQM-TMPLYLKLTALAVTILG 497
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
34-470 |
5.46e-86 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 278.78 E-value: 5.46e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 34 WELFNLNGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWD 113
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 114 GLGLVSYCLV-IYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNY--IYYYDFISDSFEMSLITVLIILAAM 189
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFqeVFALAPGAFFSALTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYN-FGWFLLIIGCMTMFMAGLGANFEFDLKKI 268
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPtALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 269 IALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLC 348
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 349 GLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLLIVA 428
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 761546112 429 VFGGSFLSWLIFPVPYMI-----------SLPYYLKFLTMFVVLLGGYLGYLI 470
Cdd:TIGR01974 465 VFAGFFIVPLFEFLKGVLptsaepalehhHVPALEIWSPTAVAILGILLAYLL 517
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
37-398 |
2.32e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 274.79 E-value: 2.32e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 37 FNLNGSmvvmtLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLG 116
Cdd:MTH00137 78 FDINIS-----FKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 117 LVSYCLV-IYYQNVSSYSAGMLTALSNRIGDVAILISIAWML-NFGSWNyIYYYDFISDSFEMSLITVLIILAAMTKSAQ 194
Cdd:MTH00137 153 IMSFLLIgWWYGRADANTAALQAVIYNRVGDIGLILAMAWMAtNLNSWE-IQQIFALSKDFDLTLPLLGLILAATGKSAQ 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 195 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNlyNFGWFLLIIGCM----TMFMA--GLGANfefDLKKI 268
Cdd:MTH00137 232 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLME--NNQTALTTCLCLgaltTLFTAtcALTQN---DIKKI 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 269 IALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLC 348
Cdd:MTH00137 307 VAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALT 386
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 761546112 349 GLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRL-FYYSM 398
Cdd:MTH00137 387 GTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVvFFVSM 437
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
46-470 |
2.81e-84 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 274.73 E-value: 2.81e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 46 MTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-I 124
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIgF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 125 YYQNVSSYSAGMLTALSNRIGDVAILISIAWML-NFGSWNYIYYYDFISDSFEMS-----LITVLIILAAMTKSAQIPFS 198
Cdd:PRK06590 158 WYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFaEFGSLNYDEVFAAAPQFFGLGwsaltLICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 199 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLY-NFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSpEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 278 GLMMsiLAMG---YSkLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLA 354
Cdd:PRK06590 318 GYMF--LALGvgaYA-AAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFA 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 355 GFYSKDLILElVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNfYSSFSFNDKSYYISFGMIFLLIVAVFGG-- 432
Cdd:PRK06590 395 GFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKEK-EKIHHPHESPAVMTLPLIVLAVLSVFAGal 472
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 761546112 433 ---SFLSWLIFP-----VPYMISLPYYLKFLTMFVVLLGGYLGYLI 470
Cdd:PRK06590 473 ivpPFLGVLPLTtelahGEAEHHLPVWVALLPLVVALAGIALAWLL 518
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
34-568 |
5.07e-77 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 255.39 E-value: 5.07e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 34 WELFNLNGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWD 113
Cdd:MTH00020 62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 114 GLGLVSYCLV-IYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYDFIS--DSFEMSLITVLIILAAM 189
Cdd:MTH00020 142 GVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFSSVFNMVVsaPSSDITLICLFLFIGAV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFLL-IIGCMTMFMAGLGANFEFDLKKI 268
Cdd:MTH00020 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKV 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 269 IALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLC 348
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 349 GLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYS-MSGDNNFYSSFSF-NDKSYYISFGMIFLLI 426
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTfLSNTNLKKAVFFHlHEGDWNLLLPLGILAL 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 427 VAVFGGSFLSWLIFPVPYMISLPYYLKFLTMFVVL-LGGYLGYLISEMNLS---RVLFSLSGLSFVSFVGSMWFMPFLST 502
Cdd:MTH00020 462 GSIFVGYLAKEMIWSFQITLPPIVPLSIKLLPVFLsLGGIGLVIILYFYSSktfRVPFSFIGRNSYTFLGSAWQFNYILN 541
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 761546112 503 KLISYFPLKYGYL-SSKSFDYGWGELFGGQGIYNLFIYLIEYIQGWY-DSNFKIYLLTFIFWMLFLVI 568
Cdd:MTH00020 542 YFLIKKIWKGGHLiSYRTIDKGVLELVGPKGISNFLIILTQGLSSLQsGLVFNYALVILIGVAIFIWG 609
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
48-569 |
2.67e-74 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 248.38 E-value: 2.67e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 48 LIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-IYY 126
Cdd:MTH00210 76 LQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 127 QNVSSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYDFISDSFE---MSLITVLIILAAMTKSAQIPFSSWLP 202
Cdd:MTH00210 156 TRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVTNINkesLTIICLLLFIGAVGKSAQLGLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 203 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFLL-IIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMM 281
Cdd:MTH00210 236 DAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 282 SILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDL 361
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 362 ILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFN--DKSYYISFGMIFLLIVAVFGGS-----F 434
Cdd:MTH00210 396 ILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGvhESSWNITFPLLLLAFGSIFVGYlgkevV 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 435 LSWLIFPVpymisLPYYLKFLTMFVVLLGGYLGYLI------SEMNLSRVLFSLSGLSFVSFVGSMWFMPFLSTKLISYF 508
Cdd:MTH00210 476 LSNVIPPI-----VPNSIKMIPLLFSLLGALLAFVIynsmvfLIKISRRGVSIRLYHVIYTFLNSAWQFNYVINHFIVKN 550
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 761546112 509 PLKYGYL-SSKSFDYGWGELFGGQGIYNLFIYLIEYIQGWYDSNFKIYLLT-FIFWMLFLVIY 569
Cdd:MTH00210 551 IWKFGHLiTYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALImIIFTTLFISGA 613
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
31-514 |
1.08e-64 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 220.17 E-value: 1.08e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 31 FVEWELFNLNGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILL 110
Cdd:MTH00095 24 FMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 111 GWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILIsiawmlnFGSWNYIYYYDFISDSFEMSLITVLIILAAMT 190
Cdd:MTH00095 104 SWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFL-------FFSGFIFSSYYFFSFSFFSSSMILMLLLTSFT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIA 270
Cdd:MTH00095 177 KSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 271 LSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGL 350
Cdd:MTH00095 257 LSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGL 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 351 PFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYysmsgdnNFYSSFSFNDKSYYISFGMIFLLIVAVF 430
Cdd:MTH00095 337 MFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWK-------SFFLSFSKVVNVYSSSVLMNFLSLMLVF 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 431 GG-SFLSWLIFpvpYMISLPYYLKFLTMFVVLLGGYLGYLISEMNLSRVLFSLSGLSFVSFVGSMWFMPFLSTKLISYFP 509
Cdd:MTH00095 410 FSvFFLWWLNF---NLLNLPSLFLYLDFYVPLFYLFMIMLFSFFFFKLLFKELKYKFFVDYFAKNVIYKLKNLKFFDLFL 486
|
....*
gi 761546112 510 LKYGY 514
Cdd:MTH00095 487 NKFGY 491
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
46-401 |
3.23e-62 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 216.81 E-value: 3.23e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 46 MTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-I 124
Cdd:PRK07376 85 MGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVgF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 125 YYQNVSSYSAGMLTALSNRIGDVAILISIA---WMLnfGSWNYIYYYDFISDSFEMSLIT--------VLIILAAMTKSA 193
Cdd:PRK07376 165 WYDRKGAADAAQKAFVVNRVGDFGLLLGILglfWAT--GSFDFDGIADRLSELVSSGAVSgwlalllcILVFLGPMAKSA 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 194 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNF-GWFLLIIGCMTMFMAGLGANFEFDLKKIIALS 272
Cdd:PRK07376 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAvMTVIAWTGAITAFLGASIALTQNDIKKGLAYS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 273 TLSQLGLMMsiLAMG---YSKlAFFHLLTHALFKALLFMCAGSMIHNLKDT--------QDIRFMGSIVYFMPLTSVCFN 341
Cdd:PRK07376 323 TISQLGYMV--MAMGcgaYSA-GLFHLMTHAYFKAMLFLGSGSVIHGMEEVvghdpvlaQDMRLMGGLRKYMPITAITFL 399
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 342 VSSLSLCGLPFLAGFYSKDLILELVCLSwiNFLIFFLYFFSTGLTAAYSFRLFYYSMSGD 401
Cdd:PRK07376 400 IGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
48-569 |
1.22e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 204.42 E-value: 1.22e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 48 LIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQ 127
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 128 N-VSSYSAGMLTALSNRIGDVAILISIAWM------LNFGSWNYIYYYDFISDS------------FEMSLITVLIILAA 188
Cdd:MTH00032 156 TrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTFNGGSVGSGIMDRgyygggayesplAPFAIIGILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 189 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFLL-IIGCMTMFMAGLGANFEFDLKK 267
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItIFGALTAFFAATVGLVQNDLKK 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 268 IIALSTLSQLGLMMSILAM-GYSKLAFFHLLTHALFKALLFMCAGSMIHNLK-DTQDIRFMGSIVYFMPLTSVCFNVSSL 345
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 346 SLCGLPFLAGFYSKDLILELV------------CLSWINFLI------------------------FFLYFFSTGLTAAY 389
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILELTysgrnmgipfgsSLLKIQGDIgikkddrgsiggpegypsrgsafaFWLGTVAALLTAFY 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 390 SFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLLIVAVFGGSFLSWLIFPV-----------PYMISLPYYLKFLTMF 458
Cdd:MTH00032 476 SIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIQDIligdiehpivpPLIKVMPTLMGLFGMG 555
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 459 VVLLGGYLGYLISEMNLSRVLFSLSGLSFVSFVGSMWFMPFLSTKLISYFPLKYGYLSS-KSFDYGWGELFGGQGIYNLF 537
Cdd:MTH00032 556 LCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLGGAWQGDHLINKLVAIPLFSFGHWGIyKTLDRGWLELFGPQGISTIA 635
|
570 580 590
....*....|....*....|....*....|...
gi 761546112 538 IYLIEYIQGWYDSNFKIYLLTFI-FWMLFLVIY 569
Cdd:MTH00032 636 LRVSQFISNLQSGVISRYALVLLsFTIIFLALW 668
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
102-380 |
3.35e-54 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 185.59 E-value: 3.35e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 102 SPNLISILLGWDGLGLVSYCLVIYY-QNVSSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIY----YYDFISDSFE 176
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 177 MSLITVLIILAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLNLYNFGW--FLLIIGCMTMF 253
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIqqILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 254 MAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIV 330
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 761546112 331 YFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYF 380
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVV 289
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
47-396 |
3.93e-49 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 176.11 E-value: 3.93e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 47 TLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 127 QNVSSYSAGMLTALSNRIGDVAILISIAWM-LNFGSWNYIYYYDFIS--DSFEMSLITVLIILAAMTKSAQIPFSSWLPA 203
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAelDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 204 AMA-APTPVSALVhSSTLVTAGVYLLIRFS----PMLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG 278
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLtllfGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 279 LMMSILAMGYSKL---AFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAG 355
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 761546112 356 FYSKDLILELVcLSWINFLIFFLYFFSTGLTAAYSFRLFYY 396
Cdd:COG0651 389 FVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
51-392 |
1.12e-47 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 178.84 E-value: 1.12e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 51 DWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVS 130
Cdd:PRK12648 75 DGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRA 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 131 SYSAGMLTALS-NRIGDVAILisiAWMLNFGSwnyiyyydfISDSFEMS----------------LITVLIILAAMTKSA 193
Cdd:PRK12648 155 DARRGARMALTvTGAGGLALL---AGVLLLGH---------IVGSYDLDvvlaagdlirahplypPALVLILLGAFTKSA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 194 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNlynfG---WFLLI--IGCMTMFMAGLGANFEFDLKKI 268
Cdd:PRK12648 223 QFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLA----GteeWFWIVggAGLITLLLGAYFALFQHDLKGL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 269 IALSTLSQLGLMMSILAMGySKLA----FFHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVCFNVSS 344
Cdd:PRK12648 299 LAYSTISHLGLITLLLGLG-SPLAavaaIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAA 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 761546112 345 LSLCGLPFLAGFYSKDL----ILELVCLSWINFLIFFLYFFSTGLTAAYSFR 392
Cdd:PRK12648 377 AAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
40-364 |
1.12e-47 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 179.08 E-value: 1.12e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 40 NGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVS 119
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 120 YCLvIYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNY--IYYYDFISD-SFEMSLITVLIILAAMTKSAQI 195
Cdd:PRK12650 147 FFL-IARSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATqTGTTSLsgILHSDVWAEkPGLTTVVAVLIAVAAFTKSAQF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 196 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-NLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTL 274
Cdd:PRK12650 226 PFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 275 SQLGLMMSILAMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLP 351
Cdd:PRK12650 306 SQLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVP 384
|
330
....*....|...
gi 761546112 352 FLAGFYSKDLILE 364
Cdd:PRK12650 385 PLFGFVSKEGMLT 397
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
37-364 |
2.57e-46 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 173.95 E-value: 2.57e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 37 FNLNGSMVVmtlifDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLG 116
Cdd:PRK12647 54 LGVNLSFLL-----DGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTS 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 117 LVSYCLVIY-YQNVSSYSAGMLTALSNRIGDVAILI------------SIAWMLNFGswnyiyyyDFISDSFEMSLITVL 183
Cdd:PRK12647 129 ITSFLLIGFnHEREAARRAALQALLVTGGGGLALLAglillgnvtgtySLSELLASG--------DVIREHPLYLAILLL 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 184 IILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-NLYNFGWFLLIIGCMTMFMAGLGANFE 262
Cdd:PRK12647 201 VLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLgGTPLWQTILPLFGGLTMLTGALLAVRQ 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 263 FDLKKIIALSTLSQLGLMMSILAMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVC 339
Cdd:PRK12647 281 TDLKLILAYSTVSALGTLVMLLGLGSElaiKAAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAA 359
|
330 340
....*....|....*....|....*
gi 761546112 340 FNVSSLSLCGLPFLAGFYSKDLILE 364
Cdd:PRK12647 360 ALLAALSMAGLPPLFGFLAKELIYE 384
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
67-419 |
1.64e-45 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 171.23 E-value: 1.64e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 67 LVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-IYYQNVSSYSAGMLTALSNRIG 145
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 146 DVAILISIA---WMLN-------FGSWNYIYYYDFISDSFeMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALV 215
Cdd:CHL00025 186 DFGLLLGILgfyWITGsfefrdlFEIFNNLIYNNEVNLLF-ATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALI 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 216 HSSTLVTAGVYLLIRFSPMLNLYNFGWFLL-IIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFF 294
Cdd:CHL00025 265 HAATMVAAGIFLVARLLPLFIVIPYIMNLIsLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALF 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 295 HLLTHALFKALLFMCAGSMIHNL--------KDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElv 366
Cdd:CHL00025 345 HLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILN-- 422
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 761546112 367 cLSWINFLIF-FLYFFSTGLTAAYSFRLFYYSMSGD---NNFYSSFSFNDKSYYISF 419
Cdd:CHL00025 423 -DSWLYSPIFaIIAWSTAGLTAFYMFRIYLLTFEGHlrvHFQNYSGKKNSSFYSISL 478
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
47-364 |
2.03e-45 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 171.57 E-value: 2.03e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 47 TLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 127 -QNVSSYSAGMLTALSNRIGDVAILISIAWML----NFGSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWL 201
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 202 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP-MLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM 280
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPvFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 281 MSILAMGYSKL----------------AFFHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVCFNVSS 344
Cdd:TIGR00940 310 MVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340
....*....|....*....|
gi 761546112 345 LSLCGLPFLAGFYSKDLILE 364
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFA 408
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
29-572 |
3.01e-43 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 161.97 E-value: 3.01e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 29 SVFVEWELFNLNGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISI 108
Cdd:MTH00063 22 SSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLST 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 109 LLGWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNyiyyydfisdsfemSLITVLIILAA 188
Cdd:MTH00063 102 LIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGS--------------FLCCLFFFLIV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 189 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKI 268
Cdd:MTH00063 168 FTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 269 IALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLC 348
Cdd:MTH00063 248 VALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSWNLFYLFLLVLGLS 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 349 GLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFndkSYYISFGMIFLliva 428
Cdd:MTH00063 328 GVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILFGVKSSLSSGVRF---LFFNSGLMVFL---- 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 429 vfgGSFLSWLIFP-VPYMISLPYYLKFLTMFVVLLGGYLGYLISEMNL-SRVLFSLSGLSFVSFVGSMWFMPFLSTKLIS 506
Cdd:MTH00063 401 ---WLFINYYVFLlLDEVVYLGVFISLVLLLVQLLGLLVGVLFYDSNLfSNWSSSLFGCDNLVELFYELFYSILDLVSLF 477
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 761546112 507 YFplkygylsskSFDYGWGELFGGQGIYNLFIYLIeyiqgwydsnfkIYLLTFIFWMLFLVIYFYV 572
Cdd:MTH00063 478 FF----------RWEIYLIELLCGVGSSSSLLYSW------------FSLNLLLLSLFFLLIYLLI 521
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
51-364 |
6.68e-43 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 164.16 E-value: 6.68e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 51 DWMSLIFMSFVMYISSLVIYYSEDYMSGES-NMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY-YQN 128
Cdd:PRK12646 77 DGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYwYNN 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 129 VSSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIY----YYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAA 204
Cdd:PRK12646 157 GDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeilgQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 205 MAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNF-GWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSI 283
Cdd:PRK12646 237 MAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMyIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAM 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 284 LAMG----------YSKL-------AFFHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVCFNVSSLS 346
Cdd:PRK12646 317 VGIGggyaqhqqdaIASIyvfvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAALS 395
|
330
....*....|....*...
gi 761546112 347 LCGLPFLAGFYSKDLILE 364
Cdd:PRK12646 396 MAGVPFLNGFLSKEMFLD 413
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-395 |
7.88e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 164.71 E-value: 7.88e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 47 TLIFDWMSLIFMSFVMYISSLVIYYSEDYM-SGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK12644 69 AFRLDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGH 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 126 Y-QNVSSYSAGMLTALSNRIGDVAILISIAWMLNF-GSWNYiyyYDFISDSFEMSLIT---VLIILAAMTKSAQIPFSSW 200
Cdd:PRK12644 149 YaERAASRRAALQALLVTTAGGLAMLVGIIILGQAaGTYRL---SELLADPPTGPAVSvavVLILVGALSKSAIVPFHFW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 201 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLN-LYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGL 279
Cdd:PRK12644 226 LPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFAdVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGF 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 280 MMSILAMGYSKLAFFHL---LTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGF 356
Cdd:PRK12644 306 LTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGF 384
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 761546112 357 YSKDLILELV----CLSWINFLIFFLYFFSTGLTAAYSFRLFY 395
Cdd:PRK12644 385 VAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
389-570 |
1.06e-42 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 150.78 E-value: 1.06e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 389 YSFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLLIVAVFGGSFLSWLIFPVPYMISLPYYLKFLTMFVVLLGGYLGY 468
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 469 LISEMNLSRVLFSLSGlSFVSFVGSMWFMPFLSTKLISYFPLKYGYLSSKSFDYGWGELFGGQGIYNLFIYLIEYIQGWY 548
Cdd:pfam06455 81 ELSNLSNKQLKKSLNF-NLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|..
gi 761546112 549 DSNFKIYLLTFIFWMLFLVIYF 570
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
47-400 |
1.97e-41 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 159.71 E-value: 1.97e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 47 TLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGES-NMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK12645 73 TLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 126 YQN--VSSYSA--GMLTALSNRIGDVAILISIAWMLnfGSWN---YIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFS 198
Cdd:PRK12645 153 WYEreASRYGAqkSMLITVFGGLSMLGGFILLYIMT--GSFSireMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFY 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 199 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNfGWFLLI--IGCMTMFMAGLGANFEFDLKKIIALSTLSQ 276
Cdd:PRK12645 231 IWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQ-VWFWTVtlVGLITLFWGSLNAVKQTDLKGILAFSTVSQ 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 277 LGLMMSILAMGYSKL----------------AFFHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVCF 340
Cdd:PRK12645 310 LGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTIA 388
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 761546112 341 NVSSLSLCGLPFLAGFYSKDLILE---------LVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSG 400
Cdd:PRK12645 389 LIGALSMAGLPPFNGFLSKEMFFEsmlnateanLFSLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFG 457
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
18-363 |
2.77e-39 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 149.74 E-value: 2.77e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 18 ILGIYYLLFDYSVFVEWELFNLnGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMS-------GESNMNRFIIIVL 90
Cdd:PRK06525 42 LSLAYAFYQAGKVAVTLTLVNL-GDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 91 MFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDF 170
Cdd:PRK06525 121 LFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSG 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 171 ISDSFEmSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLY--NFGWFLLIIG 248
Cdd:PRK06525 201 LHGSLK-YLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIphVIGYVGAVMA 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 249 CMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGY--SKLAF----FHLLTHALFKALLFMCAGSMIHNLkDTQD 322
Cdd:PRK06525 280 IVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAIlgSRLALegsiAYIFNHAFAKSLFFLVAGALSYSC-GTRL 358
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 761546112 323 IRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 363
Cdd:PRK06525 359 LPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
51-364 |
5.87e-35 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 140.35 E-value: 5.87e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 51 DWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQN-- 128
Cdd:PRK12649 79 DGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHrp 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 129 VSSYSAG---MLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDFISD--SFEMSLIT-VLIILAAMTKSAQIPFSSWLP 202
Cdd:PRK12649 159 ESVYGATkslLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENikGHPLFLITlILIFIGAAAKSAQGPFYIWLP 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 203 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNfGWFLLI--IGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM 280
Cdd:PRK12649 239 NAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTE-AWFILVsgTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 281 MSIlaMGYSK---------LAFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLP 351
Cdd:PRK12649 318 MTM--YGYTTyhepglgvaAATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAMAGIP 394
|
330
....*....|...
gi 761546112 352 FLAGFYSKDLILE 364
Cdd:PRK12649 395 PLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-396 |
1.08e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 128.46 E-value: 1.08e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 47 TLIFDWMSLIFMSFVMYISSLVIYYSedYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 127 QNVSSYSAGMLTALSNRIGDVAILISIAWMLNF-GSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAM 205
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 206 AAPTPVSALVHSSTLVTAGVYLLIRFS------PMLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGL 279
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 280 MMSILAMGYSKL---AFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGF 356
Cdd:PRK08375 310 ILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGF 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 761546112 357 YSK-DLILELVCLSWINFLIFFLyfFSTGLTAAYSFRLFYY 396
Cdd:PRK08375 389 VSKwYLVVGAVEAGQWLVLAVLL--ASSLLALLYFLRIWYR 427
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
91-369 |
9.01e-28 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 118.07 E-value: 9.01e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 91 MFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSS-YSAGMLTALSNRIGDVAILISIAWMlnfgsWNYIYYYD 169
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLL-----ARESGSYD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 170 FIS------DSFEMSLITVLIILAAMTKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPML---NLYN 239
Cdd:PRK06521 196 FAAmraahlSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLlgaPGWW 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 240 FGWFLLIIGCMTMFMAGLGANFEFDLKKIIALST-------LSQLGLMMSILAMGYSKLA-------FFHLLTHALFKAL 305
Cdd:PRK06521 275 WGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTienigiiFVGLGLAMVFIAYGMPLLAalaltaaLYHLLNHALFKSL 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 761546112 306 LFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLS 369
Cdd:PRK06521 355 LFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
53-312 |
1.59e-27 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 116.34 E-value: 1.59e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 53 MSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIiVLMFIL-SMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNvss 131
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVR-ALAGVLaAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPD--- 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 132 YSAGMLTA----LSNRIGDVAILISIA-WMLNFGSWNYIYYYDFISD---SFEMSLITVLIILAAMTKSAQIPFSSWLPA 203
Cdd:PRK08168 146 RPFARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLSALWAHLAAqgaSPSLQAAALLLVLAVILKTAQLPVHGWLIQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 204 AMAAPTPVSALVHSStLVTAGVYLLIRFSPMLNLYNFG-WFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS 282
Cdd:PRK08168 226 VMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
250 260 270
....*....|....*....|....*....|
gi 761546112 283 ILAMGYSKLAFFHLLTHALFKALLFMCAGS 312
Cdd:PRK08168 305 ECGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
58-395 |
2.40e-26 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 113.47 E-value: 2.40e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 58 MSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGML 137
Cdd:PRK07390 95 LELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAAR 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 138 TA-LSNRIGDVAILISIAWMLNF-GSWNYIYYYDFIS----DSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPV 211
Cdd:PRK07390 175 DAfLTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAAtanlDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPA 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 212 SALvHSSTLVTAGVYLLIRFSPMLNLYNFGW-FLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSK 290
Cdd:PRK07390 255 SIL-RNSVVVATGAWVLIKLQPVLALSPVALtVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPD 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 291 LAFFHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYS-KDLILELVCLS 369
Cdd:PRK07390 334 IALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWAlLRLADGLWAVS 412
|
330 340
....*....|....*....|....*.
gi 761546112 370 WINFLIFFLYFFSTGLTAAYSFRLFY 395
Cdd:PRK07390 413 PWLVGVLLLVNALTAFNLTRVFRLVF 438
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
46-364 |
5.36e-26 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 112.52 E-value: 5.36e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 46 MTLIFDWMSLIFMSFVMYISSLVIYYSEDY---MSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCL 122
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 123 VIY-YQNVSSYSAGMLTALSNRIGDVAILISIAWM-LNFGSWNYIYYYdfiSDSFEMSLITVLIILAAMTKSAQIPFSSW 200
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTGSFELSPLG---ASAGILSLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 201 LPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFspMLNLYN----FGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLS 275
Cdd:PRK08667 228 LPYAHpASPSNVSALM-SGVMLKVAVYGLVRF--LMDVLSpelwWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIE 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 276 QLGLMM--------------SILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLkDTQDIRFMGSIVYFMPLTSVCFN 341
Cdd:PRK08667 305 NIGIILmgiglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHAT-GTRNIEKMGGLVKLMPYTSALFL 383
|
330 340
....*....|....*....|...
gi 761546112 342 VSSLSLCGLPFLAGFYSKDLILE 364
Cdd:PRK08667 384 VGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
24-395 |
1.17e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 107.59 E-value: 1.17e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 24 LLFDYSVFVEWELFNLNGSMVVMTLifDWMSLIFMSFVMYISSLVIYYSEDYMSGE--SNMNRFIIIVLMFILSMGFLII 101
Cdd:PRK06589 57 LLFLKGIRAQFELMDFGNYSIGLHL--EPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIAL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 102 SPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGmLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDFISDSFEMSLIT 181
Cdd:PRK06589 135 SSDLFTMFVCYELLTISTAFLIGHTRNNISLSGG-YKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIIL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 182 VLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR-------FSPMLNLYNFGWFLLIIGCMTMFM 254
Cdd:PRK06589 214 LLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKillyifgLSYLQRIFAEFNWLIFIPIVSIFY 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 255 AGLGANFEFDLKKIIALSTLSQLGLMM---SILAMGYSKLAFFHLLTHALFKALLFMCAGSmIHNLKDTQDIRFMGSIVY 331
Cdd:PRK06589 294 SSLKALKTDNIKKILAYSTISQLSLALlsaFILTPKALGAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSK 372
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 761546112 332 FMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLS---WINFLIFFLYFFSTGLTAAYSFRLFY 395
Cdd:PRK06589 373 SFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQnqpWLSIIVMLVVIASSILSALYLLKILS 439
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-470 |
4.92e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 105.42 E-value: 4.92e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 79 ESNMNRFIIIVLMFIL-SMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGM-LTALSNrIGDVAILISIAwm 156
Cdd:PRK07234 89 ESAKTRFFYAQLLILHgSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLrYLFYSN-VAMLFYLIGAV-- 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 157 LNFGSWNYIyyyDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMln 236
Cdd:PRK07234 166 LVYQANGTF---AFSGLATADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD-- 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 237 LYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGysklAFFHlLTHALFKALLFMCAGSmIHN 316
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYA-LAHGLVKSTLFLCAGA-LPS 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 317 LKDTQDIRFMGSIVYFMPLTsvcfnVSSLSLCGLPFLAGFYSKDLILELVcLSWINFLIfflyFFSTGLTAAYSFRLFYY 396
Cdd:PRK07234 315 RNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLKNL-LPWQAIAL----NLAAVGTAASFWKFIFL 384
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 761546112 397 SMSGDNnfyssfsfNDKSYYISFgmiFLLIVAVFGGSFLSWLIFPVPYMISlpyylKFLTMFVVLLGGYLGYLI 470
Cdd:PRK07234 385 PFSADD--------EDKKPLPGF---WNAIALLLGGLFLANGVYTEAYTLG-----NILKALLTIGLGWLPYFL 442
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-395 |
5.36e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 105.56 E-value: 5.36e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 51 DWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNV- 129
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTw 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 130 SSYSAGMLTALSNRIGDVAILISIAWML-NFGSWNYIYYYDFISDSFEMSLITVLIILAA--MTKSAQIPFSSWLPAAM- 205
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLAVKMSENPTVVAKIALALFIAglAMKSGAVPVHMWLPDAYp 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 206 AAPTPVSALVHSSTLvtAGVYLLIR-----FSPMLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM 280
Cdd:PRK08376 249 AAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYM 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 281 M-----SILAMGYSKL----------AFFHLLTHALFKALLFMCAGSMIHNLkDTQDIRFMGSIVYFMPLTSVCFNVSSL 345
Cdd:PRK08376 327 LlglgvGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLIGAA 405
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 761546112 346 SLCGLPFLAGFYSKDLILELVCLswINFLIFFLYFFSTGLTAAYSFRLFY 395
Cdd:PRK08376 406 AIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLASFVKVFH 453
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-395 |
5.78e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 99.28 E-value: 5.78e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 47 TLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK12667 77 VYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYY 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 127 QNVS-SYSAGMLTALSNRIGDVAILISIAWMLN-FGSWN--------YIYYYDFISDSFEMSLITVLIILAAMT-----K 191
Cdd:PRK12667 157 RDRGdAVEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNmadlsakiRGLSFPLTGGLAGNPPLALGVALALALwaftiK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 192 SAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF---------SPMLNLYNFGWFLLIIGCMTMFMAGLGANF 261
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgispSLIDFRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 262 EFDLKKIIALSTLSQLGLMMSILAMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTSV 338
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASF 394
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 761546112 339 CFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTgLTAAYSFRLFY 395
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWY 450
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
36-312 |
7.16e-20 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 92.79 E-value: 7.16e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 36 LFNLNGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMnRFIIIVLMFIL---SMGFLIISPNLISILLGW 112
Cdd:PRK08601 56 LIGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSY-RKYFALFTFTTgfaSLAWLSGDLRLMALCWGA 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 113 DGLGLVSYCLVIYYQNVSSYSAGMlTALSNRIGDVAILISIAWM-LNFGSWnyiYYYDFISD-------SFEMSLITVLI 184
Cdd:PRK08601 135 TLLGLTLLIGLNKGWKVAREAAKI-SGMLFLISWLALALAIVWLfIATGEW---QLTSVLSNenlaqlgTWEKTGINLLL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 185 ILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPMLNlYNFGWFLLIIGCMTMFMAGLGANF-EF 263
Cdd:PRK08601 211 ILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFH-DDIAQILLLIFASISVLIGTGISLvQV 288
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 761546112 264 DLKKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGS 312
Cdd:PRK08601 289 DYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGS 337
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
105-363 |
2.79e-19 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 91.49 E-value: 2.79e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 105 LISILLGWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAW-MLNFGSWnyiyyyDFISDSFEMSLITVL 183
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSF------AFGAIAGLGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 184 IILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmlnlynfGWFLLI-IGC-MTMFMAGLgANF 261
Cdd:PRK12668 189 ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP-------GTELLIyIGAaMAVYGVFF-ALL 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 262 EFDLKKIIALSTLSQLGLMMSILAMGySKL----AFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTS 337
Cdd:PRK12668 261 ENDLRRLLSYHIVSQVGYMVAGIGIG-TALaingAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMPLTA 338
|
250 260
....*....|....*....|....*.
gi 761546112 338 VCFNVSSLSLCGLPFLAGFYSKDLIL 363
Cdd:PRK12668 339 LFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
183-393 |
3.28e-19 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 90.60 E-value: 3.28e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 183 LIILAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIR----FSPMLNLYNFGWFLLIIGCMTMFMAGL 257
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARilylMQNANGWSSVLKLVIIMATLTVFFAEL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 258 GANFEFDLKKIIALSTLSQLGLMMSILAMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGsIVYFMP 334
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEG-LGKRMP 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 761546112 335 LTSVCFNVSSLSLCGLPFLAGFYSKDLILeLVCLSWINFLIFFLYFFSTGLTAAYSFRL 393
Cdd:PRK08377 369 LTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
179-394 |
1.75e-17 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 85.52 E-value: 1.75e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 179 LITVLIILAAMTKSAQIPFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFS-PMLNL--YNFGWFLLIIGCMTMFM 254
Cdd:COG1008 210 LLFLAFFIAFAVKVPMFPFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFAlPLFPEasAYFAPLLAALGVIGIIY 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 255 AGLGANFEFDLKKIIALSTLSQLGLM-MSILAMGYSKL--AFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIVY 331
Cdd:COG1008 289 GALVALAQTDLKRLIAYSSVSHMGFVlLGIFALNPLGLqgAVLQMVSHGLITAALFLLVGVLYDRTH-TRDIADLGGLAK 367
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 761546112 332 FMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIleLVCLSWINFLIFFLYFFSTGLTAAYSFRLF 394
Cdd:COG1008 368 RMPVLAALFLLAALASLGLPGTSGFVGEFLV--LLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
18-395 |
3.01e-17 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 85.05 E-value: 3.01e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 18 ILGIYYLLFDYSVFV-EWELFNLNGSMVVMTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMnrFIIIVLMFILSM 96
Cdd:PRK08668 34 LPLLFLIKLYFTLKVgTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAY--FNMFALMSLAGV 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 97 GFLIISPNLISILLGWDGLGLVSYcLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYDFISD-- 173
Cdd:PRK08668 112 LGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQGLINdt 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 174 SFEMSLITVLIILAA-MTKSAQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFS---PMLNLYN--------- 239
Cdd:PRK08668 191 STGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLyvlPGTKLFSefgtyrgvp 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 240 -FGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYS---KLAFFHLLTHALFKALLFMCAGSMIH 315
Cdd:PRK08668 270 lFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIY 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 316 NLKDTQdIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVcLSWINFLIFFLYFFSTGLTAAYSFRLFY 395
Cdd:PRK08668 350 RTGTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL-ISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
195-356 |
1.15e-13 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 73.71 E-value: 1.15e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 195 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLNLYNFGW--FLLIIGCMTMFMAGLGANFEFDLKKIIAL 271
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAPLWWgvALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 272 STLSQLGLMMSILAMGYSKLA--------------FFHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTS 337
Cdd:PRK08042 276 HTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 761546112 338 VCFNVSSLSLCGLPFLAGF 356
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGF 373
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
47-359 |
1.18e-13 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 73.23 E-value: 1.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 47 TLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGEsNMNR--FIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV- 123
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERR-GLLRgeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVa 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 124 IYYQNVSSYSAGM----LTALSNRIgdvaILISIAWMLNF-GSWNYIYYYDFISDSFEMSLI----TVLIILAAMTKSAQ 194
Cdd:COG1007 144 FRRDDRRSSEAALkyflLGALSSGF----LLYGISLLYGAtGSLNLAGIAAALAAGGANSPLlllgLVLVLAGLAFKLSA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 195 IPFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIR-FSPMLNLYNFGWFLL--IIGCMTMFMAGLGANFEFDLKKII 269
Cdd:COG1007 220 VPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRlLVEAFPGLAADWQLLlaVLAVLSMTVGNLAALAQTNVKRML 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 270 ALSTLSQLGLMMSILAMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLS 346
Cdd:COG1007 298 AYSSIAHAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLS 377
|
330
....*....|...
gi 761546112 347 LCGLPFLAGFYSK 359
Cdd:COG1007 378 LAGIPPTAGFFGK 390
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
177-431 |
1.67e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 73.06 E-value: 1.67e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 177 MSLITVLIILAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLNLYNFGW---FLLIIGCMTM 252
Cdd:PRK07691 208 ITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFthyLILILALLTI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 253 FMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKL---AFFHLLTHALFKALLFMCAGSMIHnLKDTQDIRFMGSI 329
Cdd:PRK07691 287 IFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGL 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 330 VYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFS 409
Cdd:PRK07691 366 IKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWGEPKGYDLNN 444
|
250 260
....*....|....*....|..
gi 761546112 410 FNDKSYYISFGMIFLLIVAVFG 431
Cdd:PRK07691 445 KVPVKKLLLPAVVLVAITILYG 466
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
140-401 |
3.51e-13 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 71.77 E-value: 3.51e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 140 LSNRIGDVAILISIAWM-----LNFGSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMA-APTPVSA 213
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVqAPTAGSV 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 214 LvHSSTLVTAGVYLLIRFS-PMLNLY--NFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG-LMMSILAMGYS 289
Cdd:PRK05846 248 L-LAGILLKMGAYGLLRFSlPLFPDAshEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGNQL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 290 KL--AFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIleLVC 367
Cdd:PRK05846 327 GIqgAIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLI--LLG 403
|
250 260 270
....*....|....*....|....*....|....
gi 761546112 368 LSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGD 401
Cdd:PRK05846 404 SFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGP 437
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
134-429 |
4.27e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 71.51 E-value: 4.27e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 134 AGMLTALSNRIGDVAILISIAWM--LNFGSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMA-APTP 210
Cdd:TIGR01972 157 AAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeAPTA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 211 VSALVhSSTLVTAGVYLLIRFS----PMLNLYnFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGL-MMSILA 285
Cdd:TIGR01972 237 GSVIL-AGVLLKMGTYGFLRFNlplfPDASLY-FAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLGIFS 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 286 MGYSKL--AFFHLLTHALFKALLFMCAGsMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIl 363
Cdd:TIGR01972 315 FNELGIsgAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLI- 392
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 761546112 364 eLVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSG--DNNFYSSFSFNDKSYYISFGMIFLLIVAV 429
Cdd:TIGR01972 393 -LLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGelSNPEVAEFPDLNGREIAVLAPLVVLILFL 459
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
177-363 |
1.93e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 69.57 E-value: 1.93e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 177 MSLITVLIILAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSpMLNLYNFGW-----FLLIIGCM 250
Cdd:PRK06458 213 MKLAFVFLLIGFGTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYY-ILIDAAIGSdfpgrLLLIFGLL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 251 TMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGySKLAFF----HLLTHALFKALLFMCAGSMIHNlKDTQDIRFM 326
Cdd:PRK06458 291 SVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIG-GPLGIFaallHMLNHSLTKSAIFFASGNVLQK-YGTRDINVI 368
|
170 180 190
....*....|....*....|....*....|....*..
gi 761546112 327 GSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 363
Cdd:PRK06458 369 RGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
178-364 |
5.84e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 68.07 E-value: 5.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 178 SLITVLIILAAMTKSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLNLYNFGW-FLLIIGCMTMFMA 255
Cdd:PRK12665 209 TALFAVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDtLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 256 GLGANFEFDLKKIIALSTLSQLGLMMSILAM----GYSKlAFFHLLTHALFKALLFMCAGsMIHNLKDTQDIRFMGSIVY 331
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALstvaGLSG-AIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAK 365
|
170 180 190
....*....|....*....|....*....|...
gi 761546112 332 FMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILE 364
Cdd:PRK12665 366 ASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
173-363 |
1.41e-11 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 66.90 E-value: 1.41e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 173 DSFEMSLITVLIILAAMTKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFG---WFLLIIGC 249
Cdd:PRK12663 202 DTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQEREllhPLLATMAA 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 250 MTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKL---AFFHLLTHALFKALLFMCAGSMIHnLKDTQDIRFM 326
Cdd:PRK12663 281 ITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYL 359
|
170 180 190
....*....|....*....|....*....|....*..
gi 761546112 327 GSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 363
Cdd:PRK12663 360 GGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
182-395 |
1.36e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 63.62 E-value: 1.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 182 VLIILAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLN----LYNFGWFLLIIGCMTMFMAG 256
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgaAEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 257 LGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAF---FHLLTHALFKALLFMCAGsMIHNLKDTQDIRFMGSIVYFM 333
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQ 367
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 761546112 334 PLTSVCFNVSSLSLCGLPFLAGFYSKDLIL-ELVCLS-WINFLIFFLYFFstgltAAYSFRLFY 395
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKFFILlQLGGISvWLVLAVLLLLLL-----AASSFAIFL 426
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
47-359 |
6.07e-09 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 58.29 E-value: 6.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 47 TLIFDWMSLIFMSFVMYISSLVIYYSEDYMSgESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY- 125
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 126 YQNVSSYSAGM----LTALSNRIgdvaILISIAWMLNF-GSWNYIYYYDFISDSFEMSLI----TVLIILAAMTKSAQIP 196
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALASGF----LLYGMSLLYGAtGSLSFAGIAKALADGSGNSLLllfgLVFLLVGLAFKLSAVP 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 197 FSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPMLNLYNFGW---FLLIIGCMTMFMAGLGANFEFDLKKIIALS 272
Cdd:PRK05777 223 FHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGLSEDwqqVLAIIAIASMLVGNLAALSQTNIKRLLAYS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 273 TLSQLG-LMMSILAMGYSKL--AFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCG 349
Cdd:PRK05777 302 SIAHAGyLLVGLAAGTAEGYsaVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAG 381
|
330
....*....|
gi 761546112 350 LPFLAGFYSK 359
Cdd:PRK05777 382 IPPTAGFWGK 391
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
21-426 |
5.07e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 55.34 E-value: 5.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 21 IYYLLFDYSVFVEWELFNLNGSMVVMtLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGE-SNMNRFIIIVLMFILSMGFL 99
Cdd:TIGR01770 40 IVLLSALVSLFLTLQYAAYLFTGFSF-FIVDNFALLIKLILLLSTLLTFFFALSYLSKEkINKFEFYILLLFALLGIFLL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 100 IISPNLISILLGWDGLGLVSYCLVIY-YQNVSSYSAGMLTALSNRIGDVAILISIAWMLNF-GSWNYIYYYDFISDSFE- 176
Cdd:TIGR01770 119 VSSNDLLSIYLGLELQSLCFYVLAGLkRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFtGSLNFEDLLLFLSNGMLn 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 177 ---MSLITVLIILAAMTKSAQIPFSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPML---NLYNFGWFLLIIGC 249
Cdd:TIGR01770 199 islLLLGIVLILVGLLFKLSAVPFHMWVPDVYeGAPTPVTAFFSIVPKI-AIFAVFLRLFLYIlfgFSEAWQIFLAIIAF 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 250 MTMFMAGLGANFEFDLKKIIALSTLSQLG-LMMSILAMGYS--KLAFFHLLTHALFKALLFMCAGSM-IHNLKDTQDIRF 325
Cdd:TIGR01770 278 LSMLIGNFGALAQKKVKRLLAYSSISHVGyILIGLLAGTLEgiKAVLFYIFIYALMSLGAFGVLSLLrSYKDEWIEYISD 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 326 MGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElVCLSWINFLIFFLYFFSTGLTAAYSFRL---FYYSMSGDN 402
Cdd:TIGR01770 358 FAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFF-ALLKSGLYWLAVIAVLTSVIGAFYYLRVvkvMYFDKPERR 436
|
410 420
....*....|....*....|....*.
gi 761546112 403 NFYSSFSFNDKS--YYISFGMIFLLI 426
Cdd:TIGR01770 437 IPSNPQSKAQSLllSISALFILFLGL 462
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
181-366 |
1.74e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 53.29 E-value: 1.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 181 TVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYnfgwFLLIIGCMTMFMAGLGAN 260
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT----LLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 261 FEFDLKKIIALSTLSQLGLMMSILAMGySKLAFFHLLTHALFKALLFMcagsMIHNLKdTQDIRFMGSIVYFMPLTSVCF 340
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTTS-TKTLKDMMTSWTKSPTLNTTL 244
|
170 180
....*....|....*....|....*..
gi 761546112 341 NVSSLSLCGLPFLAGFYSKDLIL-ELV 366
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILqELT 271
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
191-358 |
3.32e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 53.11 E-value: 3.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 191 KSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFS----PMLNLYnFGWFLLIIGCMTMFMAGLGANFEFDL 265
Cdd:PRK12561 198 KLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNvqmlPDAHVY-FAPALAILGVVNIIYGALNAFAQDNV 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 266 KKIIALSTLSQLGLMM----SILAMGYSKlAFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTSVCFN 341
Cdd:PRK12561 276 KRRLAYSSVSHMGFVLlgiaAFTDLGISG-AMLQMISHGLIAAALFFLTGVTYERTH-TLSIPNMGGLAKVMPKTFALFT 353
|
170
....*....|....*..
gi 761546112 342 VSSLSLCGLPFLAGFYS 358
Cdd:PRK12561 354 ASSMASLALPGMSGFVS 370
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-359 |
4.37e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 52.70 E-value: 4.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 51 DWMSLIFMSFVMYISSLVIYYSEDYM-SGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY-QN 128
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 129 VSSYSAGMLTALSNRIGDVAILISIAWM-------LNFGSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWL 201
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLyglsggeIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 202 PAAM-AAPTPVSALVhSSTLVTAGVYLLIR-----FSPMLNLYNFgwFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLS 275
Cdd:CHL00049 238 PDVYeGSPTPVVAFL-SVTSKVAASALATRifdipFYFSSNEWHL--LLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 276 QLGLMMSILAMGYSKLAFFHLLTHALFkaLLFMCAGS----MIHNLKD-TQDIRFMGSIVYFMPLTSVCFNVSSLSLCGL 350
Cdd:CHL00049 315 QIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTgTDNIRDYAGLYTKDPFLALSLALCLLSLGGI 392
|
....*....
gi 761546112 351 PFLAGFYSK 359
Cdd:CHL00049 393 PPLAGFFGK 401
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
182-363 |
1.05e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 51.39 E-value: 1.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 182 VLIILAAMTKSAQIPFSSWLPAA-MAAPTPVSALVHSSTLVtaGVYLLIRFSPML------NLYNFGWFLLIIGCM-TMF 253
Cdd:PRK12666 214 ALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLfgpeagASAGFGQDWLLPGGLaTLA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 254 MAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKL---AFFHLLTHALFKALLFMCAGSM----------------I 314
Cdd:PRK12666 292 FGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerqrgaaadrlavtpeL 371
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 761546112 315 HNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 363
Cdd:PRK12666 372 YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALL 420
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
181-359 |
1.21e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 51.27 E-value: 1.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 181 TVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFLLIIGCMTMFMAGLG-- 258
Cdd:PRK12662 212 VLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAALAiv 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 259 -----ANFEFDLKKIIALSTLSQLGLMmsILAMG---YSKL--AFFHLLTHALFKALLFMCAGSMIHNLkDTQDIRFMGS 328
Cdd:PRK12662 292 fgsvlAILSKDIKRIFAYSSISHIGYI--ILAVSlntYYGLaaAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLN 368
|
170 180 190
....*....|....*....|....*....|.
gi 761546112 329 IVYFMPLTSVCFNVSSLSLCGLPFLAGFYSK 359
Cdd:PRK12662 369 LWKSMPKITLAFVLLSLSLIGMPPTSGFVAK 399
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
151-397 |
1.51e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 50.35 E-value: 1.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 151 ISIAWMLNFGSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 230
Cdd:MTH00200 65 TASALLLFGGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQ 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 231 FSPMLNlynfGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGySKLAFFHLLTHALFKALLFmca 310
Cdd:MTH00200 145 LAPALN----SNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLYVIITLTVF--- 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 311 gsMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILelvclswINFLIFFLYFFSTGLTAAYS 390
Cdd:MTH00200 217 --LLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-------QELSKQGLFIYATILLLGSL 287
|
....*..
gi 761546112 391 FRLFYYS 397
Cdd:MTH00200 288 LSLFFYL 294
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
57-364 |
1.64e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 50.94 E-value: 1.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 57 FMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMF-ILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNvSSYSAG 135
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLSSLYILtILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 136 MLTALSNrigdvailISIAWMLNFGSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPF--SSWLPAAMAAPTPVSA 213
Cdd:PRK06459 124 VFMAFGE--------LSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGNAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 214 LVHSSTLVTAGVYLLIR---FSPMLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAM---- 286
Cdd:PRK06459 196 AILSATMTLMGVYGILKmtiLTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymvt 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 287 --GYSKLAFFHLLT-------HALFKALLFMCAGSMihnlkDTQDIRFMGSIVYFMplTSVCFNVSSLSLCGLPFLAGFY 357
Cdd:PRK06459 276 kqLITSIEHFSLITvilysfaHSVAKTGLFLSSGLQ-----EKQSITYSKKIRNRW--IELGLTLLASSLSGLLPNIGGV 348
|
....*..
gi 761546112 358 SKDLILE 364
Cdd:PRK06459 349 ASWLLLE 355
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
46-364 |
4.42e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 49.26 E-value: 4.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 46 MTLIFDWMSLIFMSFVMYISSLVIYyseDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK06277 66 ITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIA 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 126 YQNVSSYSAGMLTALSNRIGDVAILISIAWMLNF-GSWNY--IYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLP 202
Cdd:PRK06277 143 SGTEEAYKAALKYMILGNVAGSILLLGIGFLLAStGTLNItdIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 203 AAMAAPTP--VSALVHSS---TLVTAGVYLLIRFSPMLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK06277 223 SDIYAKAKpfGSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQG 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 278 GLMMSILAMG--YSKLA-FFHLLTHALFKALLFMCAGSmIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLA 354
Cdd:PRK06277 303 GYVAAGLALGtpLGIVAgIFHAINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFN 381
|
330
....*....|
gi 761546112 355 GFYSKDLILE 364
Cdd:PRK06277 382 GFQSKLMLAQ 391
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
183-440 |
2.27e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 47.03 E-value: 2.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 183 LIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSstLVTAGVYLLIrfspMLNLYNFGWFLLIIGCMTMFMAGLGANFE 262
Cdd:PRK12664 149 LFMLGLLINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILLFLGIITAIYGIIFASLE 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 263 FDLKKIIALSTLSQLGLMMSILAMGYSK-----LAFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIvYFMPLTS 337
Cdd:PRK12664 223 QNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINRTR-KFNLNRVGGL-FKMSLEA 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 338 VCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYF--FSTGLTAAYSFRLFYY---SMSGDNNFYSSFSFND 412
Cdd:PRK12664 301 MCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFliCSLLLFASVGLKFFWYafiSKSKSKPEAEKVYIGS 380
|
250 260
....*....|....*....|....*...
gi 761546112 413 KsyyisFGMIFLLIVAVFGGSFLSWLIF 440
Cdd:PRK12664 381 K-----LSMIILVLICVVLGMFNSYLLF 403
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
174-364 |
2.97e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 46.45 E-value: 2.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 174 SFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYnfgwFLLIIGCMTMF 253
Cdd:MTH00070 88 NMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN----LLIIMGLLSTL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 254 MAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGySKLAFFHLLTHALFKALLFMcagsMIHNLKDTQDIRFMGSIVYFM 333
Cdd:MTH00070 164 IGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFL----MLMNLNSTNINKLSSSWSKNP 238
|
170 180 190
....*....|....*....|....*....|.
gi 761546112 334 PLTSVCFnVSSLSLCGLPFLAGFYSKDLILE 364
Cdd:MTH00070 239 TLTSMMM-LTLLSLGGLPPTTGFIPKWLILQ 268
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
179-389 |
3.33e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 46.63 E-value: 3.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 179 LITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSpmLNLYNFGWFLL-----IIGCMTMF 253
Cdd:PRK07363 206 ILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVapglaIIGTISVI 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 254 MAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKL---AFFHLLTHALFKALLFMCAGsMIHNLKDTQDIRFMGSI- 329
Cdd:PRK07363 284 YGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLm 362
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 761546112 330 --VYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElvcLSWINFLI-FFLYFFSTGLTAAY 389
Cdd:PRK07363 363 npIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ---GSFSTFPIpTLLCIVASGLTAVY 422
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
179-389 |
4.51e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 46.23 E-value: 4.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 179 LITVLIILAAMTKSAQIPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSpmLNLYNFGW-----FLLIIGCMTM 252
Cdd:PRK06473 206 LLLAPILVGFGIKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFG--VGLFPEAWvylapWLATWAVVSV 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 253 FMAGLGANFEFDLKKIIALSTLSQLG--LMMSILAMGYSKL-AFFHLLTHALFKALLFMCAGsMIHNLKDTQDIRFMGSI 329
Cdd:PRK06473 283 LYGASCAIAQKDMKKMVAYSSIGHMGyiLLAAAAATPLSILaAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGL 361
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 761546112 330 V---YFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELvclswiNFLIF----FLYFFSTGLTAAY 389
Cdd:PRK06473 362 LnpeRGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRG------SFPIFpvqtLLCMIGTGLTAVY 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
184-424 |
8.47e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 45.30 E-value: 8.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 184 IILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS-PMLNL--YNFGWFLLIIGCMTMFMAGLGAN 260
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSwPILPLgaQNLAPAVIAMGIVGIVYGSFATC 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 261 FEFDLKKIIALSTLSQLGLmMSILAMGYSKL----AFFHLLTHALFKALLFMCAgSMIHNLKDTQDIRFMGSIVYFMPLT 336
Cdd:MTH00226 316 RQIDVKRLVAYSSVAHMGL-VSITLVTHDIIgltgSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIW 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 337 SVCFNVSSLSLCGLPFLAGFYSKDLILeLVCLSWiNFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFS--FNDKS 414
Cdd:MTH00226 394 GTIMIVTSLANVAVPPSGNFIGEYLSI-LSSFNW-NPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFArdVNRRE 471
|
250
....*....|
gi 761546112 415 YYISFGMIFL 424
Cdd:MTH00226 472 FYITASMVFF 481
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
191-442 |
1.50e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 44.67 E-value: 1.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS-PMLNLYNFGWFLLII--GCMTMFMAGLGANFEFDLKK 267
Cdd:MTH00204 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSwPLFPAASEYFAPLIVmlSVIAVIYGSLTTCRQVDFKR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 268 IIALSTLSQLGLM-MSILAMGYSKL--AFFHLLTHALFKALLFMcAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSS 344
Cdd:MTH00204 302 LIAYSSVAHMGLVpLGLFTHTIEGLvaAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLS 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 345 LSLCGLPFLAGFYSKdlILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSfNDKSYYISFGMIFL 424
Cdd:MTH00204 381 LANMGFPLSCNFVGE--FFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFS-RDLNRRELLAILPL 457
|
250
....*....|....*...
gi 761546112 425 LIVAVFGGSFLSWLIFPV 442
Cdd:MTH00204 458 IIAIFLLGIVPFIIIDLV 475
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
144-427 |
3.62e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 43.12 E-value: 3.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 144 IGDVAILISIAWMLNF-GSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVT 222
Cdd:MTH00217 171 IGSVFMLLGIFTLYSYaGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLK 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 223 AGVYLLIRFS-PMLNLYN--FGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM-MSILAMGYSKL--AFFHL 296
Cdd:MTH00217 251 LGGYGFIRFSwPLLPEASeyFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVtLGIFSHTIQGLvaAIFLM 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 297 LTHALFKALLFMcAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKdlILELVCLSWINFLIF 376
Cdd:MTH00217 331 LAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGE--FLSLLAAFEYSYIVG 407
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 761546112 377 FLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFS--FNDKSYYISFGMIFLLIV 427
Cdd:MTH00217 408 VLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSrdLNRREFYVLLPLVFLIYL 460
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
234-440 |
4.07e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 42.89 E-value: 4.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 234 MLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSM 313
Cdd:MTH00160 136 LLSYLINNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFN 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 314 IHNLKDTQDIRFMGSIVYFMpltsvcFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTgLTAAYSFRL 393
Cdd:MTH00160 216 IFFLNQLFNSNNKSKKIKFL------LFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSL-ITLYFYLRI 288
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 761546112 394 FYYSMSGdNNFYSSFSFNDKSYYISFGMIFLLIVAVFGGSFLSWLIF 440
Cdd:MTH00160 289 SYSSLML-NYNKNKWNLKKKKNKFSLILNFLSFISLFGLILSSLLFL 334
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
51-359 |
4.51e-04 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 43.12 E-value: 4.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 51 DWMSLIFMSFVMYISSLVIYYSEDYM--SGeSNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQN 128
Cdd:PRK02504 77 DNLSIAFRAIIALSTLVTLLMSWRYVeqSG-TPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGYMKR 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 129 VSSYSAGMLTALSNRIGDVAILI---SIAWMLNFGSWNY--IYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPA 203
Cdd:PRK02504 156 DPRSNEAALKYLLIGAASSAIFLygsSLLYGLSGGSTQLsaIALALITSPSLGLALALVFVIAGIAFKISAVPFHQWTPD 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 204 AM-AAPTPVSALVhSSTLVTAGVYLLIRF-SPMLNLYNFGWFLL--IIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGL 279
Cdd:PRK02504 236 VYeGSPTPVVAFL-SVGSKAAGFALAIRLlVTAFPSFDEQWKLLftALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGF 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 280 MMSILAM----GYSKLAFFHLlthalfkALLFMCAGS----MIHNLKDTQD-IRFMGSIVYFMPLTSVCFNVSSLSLCGL 350
Cdd:PRK02504 315 VMIGLVAgteaGYASMVFYLL-------AYLFMNLGAfacvILFSLRTGTDqISDYAGLYQKDPLLTLGLSLCLLSLGGI 387
|
....*....
gi 761546112 351 PFLAGFYSK 359
Cdd:PRK02504 388 PPLAGFFGK 396
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
46-85 |
1.49e-03 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 36.64 E-value: 1.49e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 761546112 46 MTLIFDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRF 85
Cdd:pfam00662 11 FGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
195-358 |
1.81e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 41.23 E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 195 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS----PMLNLYnFGWFLLIIGCMTMFMAGLGANFEFDLKKIIA 270
Cdd:PRK02546 230 VPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNagmlPDAHAQ-FAPLLIVLGVVNIIYAALTSFAQRNLKRKIA 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 271 LSTLSQLGLMM----SILAMGYSKlAFFHLLTHALFKALLFMCAGSMiHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLS 346
Cdd:PRK02546 309 YSSISHMGFVLigigSFTDLGTSG-AMLQMISHGLIGASLFFLVGAT-YDRTHTLMLDEMGGVGQKMRKMFAMWTACSLA 386
|
170
....*....|..
gi 761546112 347 LCGLPFLAGFYS 358
Cdd:PRK02546 387 SLALPGMSGFVA 398
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
172-419 |
9.23e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 38.50 E-value: 9.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 172 SDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSpmlnlyNFGWFLLIIGCMT 251
Cdd:MTH00197 73 SNLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNS------SSFMGLLICSVLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 252 MFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFFhllthaLFKALLFMCAGSMIHNLKDTQDIRFMGSIVY 331
Cdd:MTH00197 147 SLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLY------YLIYFVIMFMLFLFLSKNNLSSLNQQYSNPE 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546112 332 FMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWInFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFN 411
Cdd:MTH00197 221 SMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNI-SLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKI 299
|
....*...
gi 761546112 412 DKSYYISF 419
Cdd:MTH00197 300 NLLYSGLF 307
|
|
| |
