NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|761546117|ref|YP_009122345|]
View 

NADH dehydrogenase subunit 1 (mitochondrion) [Sinotmethis brachypterus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 2.47e-149

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 421.49  E-value: 2.47e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   5 LFMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFS 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  85 LMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 165 SFNMVDFMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 761546117 245 TLIFMGGDFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLL 310
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 2.47e-149

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 421.49  E-value: 2.47e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   5 LFMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFS 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  85 LMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 165 SFNMVDFMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 761546117 245 TLIFMGGDFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLL 310
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-302 1.28e-97

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 289.76  E-value: 1.28e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   13 LLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFSLMISLLVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   93 MIFPYLTYM--CSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSFNMVD 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  171 FMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFMG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 761546117  251 G------DFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIF 302
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-311 1.11e-91

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 275.86  E-value: 1.11e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   4 DLFMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVF 83
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  84 SLMISLLVWMIFPYLTYMC--SFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005   87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 162 LVGSFNMVDFMNYQ-LYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:COG1005  167 LAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 241 SMLMTLIFMGG--------DFYS----FFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLnFFIFFVGLKV 308
Cdd:COG1005  247 SALATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325


                 ...
gi 761546117 309 LLI 311
Cdd:COG1005  326 LLF 328
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 2.47e-149

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 421.49  E-value: 2.47e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   5 LFMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFS 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  85 LMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 165 SFNMVDFMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 761546117 245 TLIFMGGDFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLL 310
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 7-307 8.19e-129

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 369.36  E-value: 8.19e-129
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   7 MFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFSLM 86
Cdd:MTH00225   2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  87 ISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSF 166
Cdd:MTH00225  82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 167 NMVDFMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTL 246
Cdd:MTH00225 162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 761546117 247 IFMGGDFY--SFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLK 307
Cdd:MTH00225 242 LFFGGFFVtiDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIIL 304
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-306 6.46e-118

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 341.85  E-value: 6.46e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   6 FMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFSL 85
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  86 MISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGS 165
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 166 FNMVDFMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMT 245
Cdd:MTH00143 161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 761546117 246 LIFMGGDF-----YSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00143 241 VLFFGGSSvlfllGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-313 2.19e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 307.71  E-value: 2.19e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   7 MFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFSLM 86
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  87 ISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSF 166
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 167 NMVDFMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTL 246
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 761546117 247 IFMGG-------DFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLLISF 313
Cdd:MTH00104 241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 9-306 2.19e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 307.61  E-value: 2.19e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   9 ILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFSLMIS 88
Cdd:MTH00218   5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  89 LLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSFNM 168
Cdd:MTH00218  85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 169 VDFMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIF 248
Cdd:MTH00218 165 EGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 761546117 249 MGGDFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00218 245 LGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSL 302
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 5-310 2.24e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 307.44  E-value: 2.24e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   5 LFMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFS 84
Cdd:MTH00195   1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  85 LMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00195  81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 165 SFNMVDFMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00195 161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 761546117 245 TLIFMGGDfYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLL 310
Cdd:MTH00195 241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-312 2.53e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 305.39  E-value: 2.53e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   5 LFMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFS 84
Cdd:MTH00071   4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  85 LMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00071  84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 165 SFNMVDFMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00071 164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 761546117 245 TLIFMGGDFY-------SFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLLIS 312
Cdd:MTH00071 244 TILFLGSTYNhlqpelsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLG 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 5-306 1.54e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 300.66  E-value: 1.54e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   5 LFMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFS 84
Cdd:MTH00111   4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  85 LMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00111  84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 165 SFNMVDFMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00111 164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 761546117 245 TLIFMG-------GDFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00111 244 TILFLNpstlnlpPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSM 312
NADHdh pfam00146
NADH dehydrogenase;
13-302 1.28e-97

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 289.76  E-value: 1.28e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   13 LLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFSLMISLLVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   93 MIFPYLTYM--CSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSFNMVD 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  171 FMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFMG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 761546117  251 G------DFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIF 302
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-310 2.64e-97

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 289.95  E-value: 2.64e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   3 YDLFMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPV 82
Cdd:MTH00040   1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  83 FSLMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00040  81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 163 VGSFNMVDFMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSM 242
Cdd:MTH00040 161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 761546117 243 LMTLIFMGGD--FYSFFFF------VKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLL 310
Cdd:MTH00040 241 LSVILFLGGGspFNEIFPIniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-310 5.36e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 289.20  E-value: 5.36e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   1 MLYDLFMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFS 80
Cdd:MTH00134   1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  81 PVFSLMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00134  81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 161 ILVGSFNMVDFMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:MTH00134 161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 761546117 241 SMLMTLIFMGGDFYSFF-------FFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLL 310
Cdd:MTH00134 241 NTLSAILFLGASHIPTLpelttinLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-311 8.93e-93

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 277.82  E-value: 8.93e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   8 FILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFSLMI 87
Cdd:MTH00010   5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  88 SLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSFN 167
Cdd:MTH00010  85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 168 MVDFMNYQlYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLI 247
Cdd:MTH00010 165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 761546117 248 FMGGDFYSFF----FFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLLI 311
Cdd:MTH00010 244 FTSFIPSIFIsdlmLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-311 1.11e-91

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 275.86  E-value: 1.11e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   4 DLFMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVF 83
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  84 SLMISLLVWMIFPYLTYMC--SFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005   87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 162 LVGSFNMVDFMNYQ-LYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:COG1005  167 LAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 241 SMLMTLIFMGG--------DFYS----FFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLnFFIFFVGLKV 308
Cdd:COG1005  247 SALATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325


                 ...
gi 761546117 309 LLI 311
Cdd:COG1005  326 LLF 328
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 5-306 1.54e-86

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 262.36  E-value: 1.54e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   5 LFMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFS 84
Cdd:MTH00054   1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  85 LMISLLVWMIFPYLT--YMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00054  81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 163 VGSFNMVDFMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSM 242
Cdd:MTH00054 161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 761546117 243 LMTLIFMGGDFYSF----------FFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00054 241 FGVILFLGGWLVISgptsyfsnfvWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGI 314
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 5.09e-86

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 260.89  E-value: 5.09e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   5 LFMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFS 84
Cdd:PRK06076   9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  85 LMISLLVWMIFPYLTY--MCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:PRK06076  89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 163 VGSFNMVDFMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSM 242
Cdd:PRK06076 169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 761546117 243 LMTLIFMGGdFYSFF-----------FFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:PRK06076 249 LITTLFLGG-WLPPFplgggipgaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-306 1.48e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 260.05  E-value: 1.48e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   1 MLYDLFMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFS 80
Cdd:MTH00216   1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  81 PVFSLMISLLVWMIFPYL--TYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216  81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 159 LIILVGSFNMVDFMNYQL-YCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSI 237
Cdd:MTH00216 161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 761546117 238 IFMSMLMTLIFMGG--------DFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00216 241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 2-306 2.55e-71

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 224.13  E-value: 2.55e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   2 LYDLFMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSP 81
Cdd:MTH00029   3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  82 VFSLMISLLVWMIFPYL--TYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 159
Cdd:MTH00029  83 IISFTLAILAWAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISV 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 160 IILVGSFNMVDFMNYQLYCWFIIFSFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIF 239
Cdd:MTH00029 163 ILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIIL 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 240 MSMLMTLIFMGG-----------------------DFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLS 296
Cdd:MTH00029 243 MSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLS 322

                        330
                 ....*....|
gi 761546117 297 LNFFIFFVGL 306
Cdd:MTH00029 323 LGLVILTAGI 332
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-308 4.64e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 206.29  E-value: 4.64e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  11 NFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFSLMISLL 90
Cdd:MTH00090   1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  91 VWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSFNMVD 170
Cdd:MTH00090  81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 171 FMNYQLYCWFIIFsfplalacFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFMG 250
Cdd:MTH00090 161 SFSLSLFVIYLPF--------LIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 761546117 251 GDFYSFFFFVklgflaFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKV 308
Cdd:MTH00090 233 FSFLMLFLIF------SLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 6-304 6.68e-50

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 167.41  E-value: 6.68e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   6 FMFILNFLLLMICVLIsVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSPVFSL 85
Cdd:MTH00058   2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  86 MISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGS 165
Cdd:MTH00058  81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 166 FNMVDFMnyqLYCWFIIFSFPLALACFASC-LAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00058 161 YSLVDFY---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLG 237

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 245 TLIFMGGDFYSFFFFVKLGFlafcFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFV 304
Cdd:MTH00058 238 SVLFFGGGFVSIMLLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-297 4.01e-33

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 125.06  E-value: 4.01e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   2 LYDLFMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPILSNYLLYYFSP 81
Cdd:CHL00032  23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  82 ---VFSLMISLLVwMIFPYLTYMCSFSYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:CHL00032 103 siaVISILLSYLV-IPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 159 LIILVGSFNMVDFMN----YQLYCW--------FIIFsfplalacFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGF 226
Cdd:CHL00032 182 ISLLSNSLSTVDIVEaqskYGFWGWnlwrqpigFIVF--------LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKF 253

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 227 TLIFLAEYTSIIFMSMLMTLIFMGG-----------DFYS--------------FFFFVKLGFLAFCFIWVRGTLPRFRY 281
Cdd:CHL00032 254 GLFYVASYLNLLVSSLFVTVLYLGGwnlsipyifipELFEinktggvfgttigiFITLAKTYLFLFISITTRWTLPRLRM 333

                        330
                 ....*....|....*.
gi 761546117 282 DKLMYLAWKSFLPLSL 297
Cdd:CHL00032 334 DQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-304 9.78e-26

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 103.72  E-value: 9.78e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117   6 FMFILNFLLLMICVLISVAFLTLFERKILGYIQIRKGPnkvgfvGIPQPFSDAIKLVCKEQPIPILSNyLLYYFSPVFSL 85
Cdd:COG0650    1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117  86 MISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTV--MIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILV 163
Cdd:COG0650   74 AAMLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFflALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 164 GSFNMVDFMNYQLYCWFIIFSFPL---ALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:COG0650  154 GSTSLSDIVAYQAAHGPLLLSPSLllaAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 761546117 241 SMLMTLIFMGGDFYS------FFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFV 304
Cdd:COG0650  234 LSLFVNLFLPWGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH