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Conserved domains on  [gi|927372339|ref|YP_009164626|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Amazona ochrocephala]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009570)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 7-326 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 214422  Cd Length: 323  Bit Score: 562.59  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339   7 PLNYPITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLA 86
Cdd:MTH00111   4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  87 FLLALTVWTPLPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIG 166
Cdd:MTH00111  84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 167 NYTMTTLTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLT 246
Cdd:MTH00111 164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 247 ALLFLNPSTLNPPPELFPLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPPYL 326
Cdd:MTH00111 244 TILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 7-326 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 562.59  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339   7 PLNYPITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLA 86
Cdd:MTH00111   4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  87 FLLALTVWTPLPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIG 166
Cdd:MTH00111  84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 167 NYTMTTLTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLT 246
Cdd:MTH00111 164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 247 ALLFLNPSTLNPPPELFPLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPPYL 326
Cdd:MTH00111 244 TILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
NADHdh pfam00146
NADH dehydrogenase;
15-306 3.13e-109

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 319.80  E-value: 3.13e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339   15 LTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLALTVW 94
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339   95 TP--LPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIGNYTMTT 172
Cdd:pfam00146  83 AVipFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  173 LTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLTALLFLN 252
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 927372339  253 pSTLNPPPELFPLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTL 306
Cdd:pfam00146 243 -GWLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-306 1.24e-98

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 293.96  E-value: 1.24e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339   1 MVWPNIP-LNYPITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLF 79
Cdd:COG1005    1 MSLLLAPlLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  80 ITTPMLAFLLALTVWTP--LPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAII 157
Cdd:COG1005   81 LLAPILAFIPALLAFAVipFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 158 LLSMIMLIGNYTMTTLTISQE-PLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEY 236
Cdd:COG1005  161 LLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEY 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 927372339 237 ANIMLMNTLTALLFL----NPSTLNPPPELFPLI-LATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTL 306
Cdd:COG1005  241 ANMFLVSALATTLFLggwlGPFPILPLGGLPGILwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 7-326 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 562.59  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339   7 PLNYPITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLA 86
Cdd:MTH00111   4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  87 FLLALTVWTPLPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIG 166
Cdd:MTH00111  84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 167 NYTMTTLTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLT 246
Cdd:MTH00111 164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 247 ALLFLNPSTLNPPPELFPLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPPYL 326
Cdd:MTH00111 244 TILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 8-326 1.25e-172

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 481.41  E-value: 1.25e-172
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339   8 LNYPITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLAF 87
Cdd:MTH00134   6 ITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLAL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  88 LLALTVWTPLPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIGN 167
Cdd:MTH00134  86 TLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGG 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 168 YTMTTLTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLTA 247
Cdd:MTH00134 166 FTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSA 245

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 927372339 248 LLFLNPSTLNPPPELFPLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPPYL 326
Cdd:MTH00134 246 ILFLGASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 12-324 7.00e-168

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 469.49  E-value: 7.00e-168
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  12 ITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLAL 91
Cdd:MTH00071   9 INPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLAL 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  92 TVWTPLPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIGNYTMT 171
Cdd:MTH00071  89 IIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLM 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 172 TLTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLTALLFL 251
Cdd:MTH00071 169 NFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFL 248

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 927372339 252 NPSTLNPPPELFPLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPP 324
Cdd:MTH00071 249 GSTYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPP 321
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 12-326 1.30e-166

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 466.02  E-value: 1.30e-166
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  12 ITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLAL 91
Cdd:MTH00104   4 INILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLAL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  92 TVWTPLPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIGNYTMT 171
Cdd:MTH00104  84 TMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLS 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 172 TLTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLTALLFL 251
Cdd:MTH00104 164 TLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFL 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 927372339 252 NPSTLNPPPELFPLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPPYL 326
Cdd:MTH00104 244 GAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 12-324 8.22e-140

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 397.74  E-value: 8.22e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  12 ITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLAL 91
Cdd:MTH00218   6 INLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLAL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  92 TVWTPLPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIGNYTMT 171
Cdd:MTH00218  86 LLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLE 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 172 TLTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLTALLFL 251
Cdd:MTH00218 166 GFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFL 245

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 927372339 252 NPSTLnpppelfPLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPP 324
Cdd:MTH00218 246 GTSLT-------TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 5-326 4.34e-136

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 388.95  E-value: 4.34e-136
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339   5 NIPLNYPITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPM 84
Cdd:MTH00040   1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  85 LAFLLALTVWTPLPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIML 164
Cdd:MTH00040  81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 165 IGNYTMTTLTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNT 244
Cdd:MTH00040 161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 245 LTALLFLNPStlNPPPELFPL---ILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAG 321
Cdd:MTH00040 241 LSVILFLGGG--SPFNEIFPIniiIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNI 318


                 ....*
gi 927372339 322 LPPYL 326
Cdd:MTH00040 319 LPPNY 323
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 12-321 3.63e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 330.17  E-value: 3.63e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  12 ITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLAL 91
Cdd:MTH00195   6 IHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALAL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  92 TVWTPLPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIGNYTMT 171
Cdd:MTH00195  86 ILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFT 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 172 TLTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLTALLFL 251
Cdd:MTH00195 166 IMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFL 245

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 252 NPSTLnpppelfpLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAG 321
Cdd:MTH00195 246 GGGGT--------IIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 12-308 5.63e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 322.20  E-value: 5.63e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  12 ITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLAL 91
Cdd:MTH00143   5 LSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILAL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  92 TVWTPLPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIGNYTMT 171
Cdd:MTH00143  85 LLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFI 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 172 TLTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLTALLFL 251
Cdd:MTH00143 165 EISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFF 244

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 927372339 252 npSTLNPPPELFPLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSL 308
Cdd:MTH00143 245 --GGSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSI 299
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 18-317 1.59e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 320.95  E-value: 1.59e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  18 MIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLALTVWTPL 97
Cdd:MTH00193  12 IICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIY 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  98 PLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIGNYTMTTLTISQ 177
Cdd:MTH00193  92 PYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQ 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 178 EPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLTALLFLNPSTLN 257
Cdd:MTH00193 172 KYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLS 251

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 258 pppelfpLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPI 317
Cdd:MTH00193 252 -------LLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKI 304
NADHdh pfam00146
NADH dehydrogenase;
15-306 3.13e-109

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 319.80  E-value: 3.13e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339   15 LTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLALTVW 94
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339   95 TP--LPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIGNYTMTT 172
Cdd:pfam00146  83 AVipFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  173 LTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLTALLFLN 252
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 927372339  253 pSTLNPPPELFPLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTL 306
Cdd:pfam00146 243 -GWLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 12-314 5.09e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 304.27  E-value: 5.09e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  12 ITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLAL 91
Cdd:MTH00225   5 LKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  92 TVWTPLPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIGNYTMT 171
Cdd:MTH00225  85 ILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLF 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 172 TLTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLTALLFL 251
Cdd:MTH00225 165 DFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFF 244

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 927372339 252 NPSTLnpppeLFPLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTS 314
Cdd:MTH00225 245 GGFFV-----TIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLI 302
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 12-324 1.21e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 301.65  E-value: 1.21e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  12 ITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLAL 91
Cdd:MTH00216  10 IKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLAL 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  92 TVWTPLPLPLPLV--DLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIGNYT 169
Cdd:MTH00216  90 IVWGVIPYERGVLisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLS 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 170 MTTLTISQEP-LYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLTAL 248
Cdd:MTH00216 170 ITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTI 249

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 927372339 249 LFLNpSTLNPPPELF--PLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPP 324
Cdd:MTH00216 250 LFLG-GWLSPIKYFKggAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 12-325 1.13e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 298.95  E-value: 1.13e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  12 ITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLAL 91
Cdd:MTH00054   6 IKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAF 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  92 TVWTPLPLPLPLV--DLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIGNYT 169
Cdd:MTH00054  86 IAWGVIPYGEGVVlsDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLN 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 170 MTTLTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLTALL 249
Cdd:MTH00054 166 LTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVIL 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 250 FL----NPSTLNPPPELFpLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPPY 325
Cdd:MTH00054 246 FLggwlVISGPTSYFSNF-VWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPPF 324
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-306 1.24e-98

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 293.96  E-value: 1.24e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339   1 MVWPNIP-LNYPITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLF 79
Cdd:COG1005    1 MSLLLAPlLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  80 ITTPMLAFLLALTVWTP--LPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAII 157
Cdd:COG1005   81 LLAPILAFIPALLAFAVipFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 158 LLSMIMLIGNYTMTTLTISQE-PLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEY 236
Cdd:COG1005  161 LLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEY 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 927372339 237 ANIMLMNTLTALLFL----NPSTLNPPPELFPLI-LATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTL 306
Cdd:COG1005  241 ANMFLVSALATTLFLggwlGPFPILPLGGLPGILwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-306 1.41e-93

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 280.93  E-value: 1.41e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339   1 MVWPNIPLNYPITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFI 80
Cdd:PRK06076   3 LFGPDLLLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFL 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  81 TTPMLAFLLALTVWTPLPLPLPLV--DLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIIL 158
Cdd:PRK06076  83 LAPVIAFIPAFLAWAVIPFGPELViaDLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSL 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 159 LSMIMLIGNYTMTTLTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYAN 238
Cdd:PRK06076 163 LAVVLLAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYIN 242

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 927372339 239 IMLMNTLTALLFLN------PSTLNPPPelfPLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTL 306
Cdd:PRK06076 243 MILVSALITTLFLGgwlppfPLGGGIPG---AIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 12-324 7.79e-86

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 261.88  E-value: 7.79e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  12 ITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLAL 91
Cdd:MTH00029  11 IKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAI 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  92 TVWTPLPLP--LPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIGNYT 169
Cdd:MTH00029  91 LAWAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLN 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 170 MTTLTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLTALL 249
Cdd:MTH00029 171 ISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIF 250

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 250 FLNP--STLNPPPELFPLILA--------------TKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHT 313
Cdd:MTH00029 251 FLGGwlSPLDGIPTPPEAFSIfeqiasskssfwffTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTA 330

                        330
                 ....*....|.
gi 927372339 314 SMPISYAGLPP 324
Cdd:MTH00029 331 GILIGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 6-308 4.27e-83

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 253.93  E-value: 4.27e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339   6 IPLNYPITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPML 85
Cdd:MTH00010   1 MNISFFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMM 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  86 AFLLALTVWTPLPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLI 165
Cdd:MTH00010  81 SLILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 166 GNYTMTTLTISQ-EPLYLMFSswPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNT 244
Cdd:MTH00010 161 QTFSFSKIIMSQySWILLMII--PLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSL 238

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 927372339 245 LTALLFLNPStlnPPPELFPLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSL 308
Cdd:MTH00010 239 FTSVFFTSFI---PSIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTS 299
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 18-306 1.50e-61

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 197.43  E-value: 1.50e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  18 MIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLALTVWTPL 97
Cdd:MTH00090   6 MIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  98 PLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIGNYT-MTTLTIS 176
Cdd:MTH00090  86 PYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSfVSSFSLS 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 177 QEPLYLMFsswplammwYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLTALLFLNPSTL 256
Cdd:MTH00090 166 LFVIYLPF---------LIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFSFL 236

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 927372339 257 NpppelfplilatkTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTL 306
Cdd:MTH00090 237 M-------------LFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 12-306 3.23e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 163.56  E-value: 3.23e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  12 ITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLAL 91
Cdd:MTH00058   5 VSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVV 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  92 TVWTPLPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLIGNYTMT 171
Cdd:MTH00058  85 FYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLV 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 172 TLTISQEPLYLMFssWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIMLMNTLTALLFL 251
Cdd:MTH00058 165 DFYYSGWLSVLLF--PLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFF 242

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 927372339 252 NPStlnpppelFPLILATKTLLLsssFLWVRASYPRFRYDQLMHLLWKNFLPLTL 306
Cdd:MTH00058 243 GGG--------FVSIMLLFHLLF---FMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 11-306 4.16e-44

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 154.72  E-value: 4.16e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  11 PITTLTYMIPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPLLFITTPMLA---F 87
Cdd:CHL00032  30 LVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAvisI 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  88 LLALTVwTPLPLPLPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSmIMLIGN 167
Cdd:CHL00032 110 LLSYLV-IPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS-ISLLSN 187

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 168 yTMTTLTISQEPLYLMFSSWPL------AMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYANIML 241
Cdd:CHL00032 188 -SLSTVDIVEAQSKYGFWGWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLV 266

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 242 MNTLTALLFLNPSTLNPP----PELF----------PLILATKTLLLSSSFLWV----RASYPRFRYDQLMHLLWKNFLP 303
Cdd:CHL00032 267 SSLFVTVLYLGGWNLSIPyifiPELFeinktggvfgTTIGIFITLAKTYLFLFIsittRWTLPRLRMDQLLNLGWKFLLP 346


                 ...
gi 927372339 304 LTL 306
Cdd:CHL00032 347 ISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
12-308 4.65e-29

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 113.35  E-value: 4.65e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  12 ITTLTYMIPILIAVAFLTLT----ERKILSYMQSRKGPnivgpfGLLQPVADGVKLFIKEPIRPSTSSPLlFITTPMLAF 87
Cdd:COG0650    1 MMLILLALLQLLLALLLAPLllgiIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVAL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339  88 ------LLALTVWTPLPLPLPLVDLNLGLlfllAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSM 161
Cdd:COG0650   74 aamllaALLVPVLTTGPPLSFSGDLIVLV----YLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFAL 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 162 IMLIGN---YTMTTLTISQEPLYLMFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFTLFFLAEYAN 238
Cdd:COG0650  150 ALLAGStslSDIVAYQAAHGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALK 229

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372339 239 IMLMNTLTALLFLnPSTLNPPPELFPLILATKTLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLSL 308
Cdd:COG0650  230 LFVLLSLFVNLFL-PWGIALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLAL 298
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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