|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.59e-150 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 427.32 E-value: 1.59e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 1 MTPTAKLISTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 81 TGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 161 SIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 927372340 321 TNTPISVLTSLSISLLPLSPMIFTIT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
7.52e-123 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 356.92 E-value: 7.52e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 1 MTPTAKLISTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 81 TGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 161 SIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 927372340 321 TNTPISVLTSLSISLLPLSPMIFTI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-323 |
7.90e-123 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 356.81 E-value: 7.90e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 1 MTPTAKLISTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 81 TGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSlNPILLTTMSIM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 161 SIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
...
gi 927372340 321 TNT 323
Cdd:MTH00135 320 QLT 322
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
2.55e-107 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 317.56 E-value: 2.55e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 1 MTPTAKLISTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 81 TGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 161 SIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITL-PPNPSSKMKqWSTKN 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMfPSTNNMKMK-WQFEN 319
|
....*.
gi 927372340 320 PTNTPI 325
Cdd:MTH00105 320 TKPMTL 325
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.78e-92 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 279.55 E-value: 1.78e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 1 MTPTAKLISTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 81 TGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 161 SIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 927372340 321 TNTPISVLTSLSISLLPLSPMIFTIT 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
11-322 |
1.89e-85 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 261.79 E-value: 1.89e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 11 LSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLT 90
Cdd:MTH00041 11 TSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 91 YPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIMSIILGGWMGL 170
Cdd:MTH00041 91 NTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 171 NQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPMLNTTLMLTLLS 250
Cdd:MTH00041 171 NQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILS 250
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 927372340 251 LAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNPTN 322
Cdd:MTH00041 251 LGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNIT 322
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
6.49e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 193.12 E-value: 6.49e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 1 MTPTAKLISTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 81 TGqwdiaqLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLlitSHSLNPILLTTMSIM 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 161 SIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITlppnpSSKMKQWSTKNP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLML-----NYNKNKWNLKKK 307
|
330 340
....*....|....*....|....*
gi 927372340 321 TNTPISVLTSLSISLLPLSPMIFTI 345
Cdd:MTH00160 308 KNKFSLILNFLSFISLFGLILSSLL 332
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-325 |
7.52e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 171.99 E-value: 7.52e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 13 ILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAqltyp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 93 pacLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLL-LITSHSLNPILLTTMSIMSIILGGWMGLN 171
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLsNFLDLYWLAYLLCVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 172 QTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTlMTSWTKTPMLNTTLMLTLLSL 251
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYKTGLSIISLLLSL 243
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 927372340 252 AGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITlppnpSSKMKQWSTKNPTNTPI 325
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLS-----SSKSKKSNSSKVLNSSI 312
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-325 |
6.97e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 161.87 E-value: 6.97e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 1 MTPTAKLISTlSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTInawh 80
Cdd:MTH00011 4 TFPTMFLFSS-TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 81 tgQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIM 160
Cdd:MTH00011 79 --MWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 161 SIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSLKSAPYEPKTK 316
|
....*
gi 927372340 321 TNTPI 325
Cdd:MTH00011 317 ILISM 321
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-313 |
1.15e-43 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 152.90 E-value: 1.15e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 11 LSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTgqwdiaqLT 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 91 YPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPttLLLITSHSLNPILLTTMSIMSIILGGWMGL 170
Cdd:MTH00197 78 SLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 171 NQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPMLNTTLMLTLLS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 927372340 251 LAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMK 313
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMK 298
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-298 |
2.62e-32 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 125.61 E-value: 2.62e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 10 TLSILLGTTITITSNHWTTAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLF--------SSTIN--- 77
Cdd:COG1007 108 LLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygaTGSLNlag 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 78 -AWHTGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKL----PPTTLLLITSHSLNP- 151
Cdd:COG1007 188 iAAALAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAd 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 152 --ILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMI-IITYNPK-LTLLTFY--TYTLMTASIFLTM------ 219
Cdd:COG1007 268 wqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYllAYLFMNLGAFAVIlllsrk 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 220 --NTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLA 297
Cdd:COG1007 348 ggEAEEIEDLAGL---ARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVV 424
|
.
gi 927372340 298 Y 298
Cdd:COG1007 425 K 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
4.18e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 115.13 E-value: 4.18e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 13 ILLGTTITITSNHWTTAWAGLEINTLSIIPMI-SKSHHPRAIEAATKYFLVQAAASTLMLFS-------------STINA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 79 WHTGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLppTTLLLITSHSLNPILLTTMS 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKL--GIFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 159 IMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNP----KLTLLTFYTYTLMTASIF--LTMNTTNISKLSTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFsiILALNVYKNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 927372340 233 SWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
3.43e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 114.15 E-value: 3.43e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 14 LLGTTITITSNHWTTAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL--- 89
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIaka 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 90 -----TYPP----ACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKL----PPTTLLLITSHSLNP---IL 153
Cdd:PRK05777 193 ladgsGNSLlllfGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEdwqQV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 154 LTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMI---IITYNPKLTLLtFY--TYTLMTASIF--LTM------N 220
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVglaAGTAEGYSAVL-FYllAYLFMTLGAFgvISLlrrkggE 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 927372340 221 TTNISKLSTLmtSWTKtPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:PRK05777 352 AESISDFAGL--SKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
4.77e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 105.09 E-value: 4.77e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 23 SNHWTTAWAGLEINTLSIIPMI-SKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL-TYPPAC----- 95
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELsKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 96 -----LLLTTAIATKLGLAPFHFWFPEVLQGSSLT-TALLLSTIMKLPP------TTLLLITSHSLNPILLTtMSIMSII 163
Cdd:pfam00361 81 llllfLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGyglirrSLLYLPSSPFIQQILLI-LAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 164 LGGWMGLNQTQTRKIMAFSSISHLGWMMIII----TYNPKLTLLTFYTYTLMTASIFL--------TMNTTNISKLSTLm 231
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsviyrRVHTRNIRDYGGL- 238
|
250 260 270
....*....|....*....|....*....|....*..
gi 927372340 232 tsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 239 --AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
11-296 |
4.04e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 99.71 E-value: 4.04e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 11 LSILLGTTITITSNHWTTAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDI--- 86
Cdd:MTH00199 104 LIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqgi 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 87 -AQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTtmSIMSIILG 165
Cdd:MTH00199 184 nSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYG 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 166 GWMGLNQTQTRKIMAFSSISHLGWMMIIITYNP----KLTLLTFYTYTLMTA---SIFLTMNTTN--ISKLSTLMTswtK 236
Cdd:MTH00199 262 AIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSIcsfSIILSLKLTKglIVEVSGLSR---K 338
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 237 TPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:MTH00199 339 NPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
11-297 |
6.92e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 98.87 E-value: 6.92e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 11 LSILLGTTITITSNHWTTAWAGLEINTLSI-IPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL 89
Cdd:TIGR01770 109 LFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 90 -----TYPP-------ACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLL-------ITSHSLN 150
Cdd:TIGR01770 189 llflsNGMLnisllllGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAW 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 151 PILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTL--LTFY--TYTLMTASIFLTM------N 220
Cdd:TIGR01770 269 QIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYifIYALMSLGAFGVLsllrsyK 348
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 927372340 221 TTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLA 297
Cdd:TIGR01770 349 DEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-296 |
2.16e-20 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 91.36 E-value: 2.16e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 14 LLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL---- 89
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 90 -TYPP-----ACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIM-KLPPTTLLLI--------TSHSLNPILL 154
Cdd:COG0651 197 aELDPglllaAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVYAILRVltllfgadPALFLGTLLL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 155 TtMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLL--TFYT--YTLMTASIFLT-------MNTTN 223
Cdd:COG0651 277 V-LGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAgaLFHLlnHALAKALLFLAagaieraTGTRD 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 927372340 224 ISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:COG0651 356 LDKLGGL---GKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-296 |
1.32e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 86.84 E-value: 1.32e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 3 PTAKLISTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAI---------EAATKYFLVQAAASTLMLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 74 STINAWHTGQ--------------WDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLppT 139
Cdd:MTH00198 267 CALYFGFTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 140 TLLLITSHSLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYT---LMTASIF 216
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAvtyLVSALAS 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 217 LTM----------------------NTTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQE 274
Cdd:MTH00198 425 FTVictleefgtrtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIA 504
|
330 340
....*....|....*....|....*....
gi 927372340 275 MTTTTMIISMASLLGL-------FFYLRL 296
Cdd:MTH00198 505 FSSSLSIYYLVALFAIictcisaFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
2.69e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 76.46 E-value: 2.69e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLT--YPPACLLLT------TAIAT 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgaLAENPTVVTafgfvlLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 105 KLGLAPFHFWFPEVLQG-SSLTTALLLSTIMKLPPTTLLLITSH----------SLNPILLTTMsIMSIILGGWMGLNQT 173
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTvfggdfrfalGLGWLLAVLA-LLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 174 QTRKIMAFSSISHLGWMMIIITYNPKLTLL--TFYT--YTLMTASIFL-------TMNTTNISKLSTLMTswtKTPMLNT 242
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLaagaievTYGTRRLSELSGLGR---RMPLTAA 370
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 927372340 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAY 298
Cdd:PRK08375 371 AFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
2.03e-14 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 73.88 E-value: 2.03e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 51 RAIEAATKYFLVQAAASTLML--FSST--INAWHTGQWDIA------QLTYPPACLL----LTTAIATKLGLAPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIVnglintQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 117 EVLQGSSLTTALLLSTIMKLPPTTLL-----LITSHSLNP--ILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASALAtrifdIPFYFSSNEwhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 190 MMI-IITYNPKLTLLTFYTYTLmtasIFLTMN---------------TTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAG 253
Cdd:CHL00049 319 VIIgIIVGDSNDGYASMITYML----FYIFMNlgtfacivlfglrtgTDNIRDYAGL---YTKDPFLALSLALCLLSLGG 391
|
250
....*....|
gi 927372340 254 LPPLTGFLPK 263
Cdd:CHL00049 392 IPPLAGFFGK 401
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-291 |
4.26e-14 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 72.81 E-value: 4.26e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 38 LSIIPM---ISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQW-----DIAQLTYPPA-----CLLLTTAIAT 104
Cdd:COG1008 142 LMLIPMyflIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 105 KLGLAPFHFWFPEVLQGSSLTTALLLSTIMK-----------LPpttLLLITSHSLNPILLTtMSIMSIILGGWMGLNQT 173
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLkmggygllrfaLP---LFPEASAYFAPLLAA-LGVIGIIYGALVALAQT 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 174 QTRKIMAFSSISHLGWMMI-IITYNPK-LTLLTFY--TYTLMTASIFLT-------MNTTNISKLSTLmtsWTKTPMLNT 242
Cdd:COG1008 298 DLKRLIAYSSVSHMGFVLLgIFALNPLgLQGAVLQmvSHGLITAALFLLvgvlydrTHTRDIADLGGL---AKRMPVLAA 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 927372340 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMT-----TTTMIISMASLLGLF 291
Cdd:COG1008 375 LFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWlailaALGLILTAAYLLWMY 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
2.41e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 67.71 E-value: 2.41e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 34 EINTLS---IIPMISKshhpRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQ----LTYPP-------ACLLLT 99
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADisqgLINDTstgfaliVFLFLL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 100 TAIATKLGLAPFHFWFPE-----------VLQG--SSLTTALLLSTIMKLPPTTLLL----ITSHSLNPILLTTMSIMSI 162
Cdd:PRK08668 204 AFGVAKAGIFPLHVWAPDayseapqsfsaVLSGqlSKLGAYGFLLVLYVLPGTKLFSefgtYRGVPLFNYILAWLGNISI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 163 ILGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLT----LLTFYTYTLMTASIFLTM-------NTTNISKLSTLM 231
Cdd:PRK08668 284 IVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfaggLFHVFNHALFKGLFFLIFaaviyrtGTTKISEMGGLI 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 927372340 232 TswtKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAY 298
Cdd:PRK08668 364 E---KMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-271 |
4.89e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 66.71 E-value: 4.89e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 48 HHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL-----------TYPPACLLLTTAIATKLGLAPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaptilsspLLTLILLLLLLGAFGKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 117 EVLQGSSLTTALL---------------LSTIMKLPPTTLLLITShslnpILLTTMsimsiILGGWMGLNQTQTRKIMAF 181
Cdd:COG1009 236 DAMEGPTPVSALLhaatmvkagvyllarLSPLFALSPVWLTVVAI-----IGAITA-----LFAALIALAQTDIKRVLAY 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 182 SSISHLGWMMIII---TYNPKLTLLTfyTYTLMTASIFL-------TMNTTNISKLSTLmtsWTKTPMLNTTLMLTLLSL 251
Cdd:COG1009 306 STVSQLGYMFLALgvgAYVAALFHLL--THAFFKALLFLgagsvihATGTRDIRKMGGL---RKKMPITAITFLIGALSL 380
|
250 260
....*....|....*....|
gi 927372340 252 AGLPPLTGFLPKWLIIQELI 271
Cdd:COG1009 381 AGIPPFAGFFSKEAILEAAL 400
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.44e-11 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 65.46 E-value: 1.44e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 50 PRAIEAATKYFLVQAAASTLMLFSST----INAWHTGQWDIAQL----TYPPACLLLTTAIAT---KLGLAPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSSllygLSGGSTQLSAIALAlitsPSLGLALALVFVIAGiafKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 119 LQGSSLTTALLLSTIMKLPPTTL---LLITSHSLNP----ILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMM 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDeqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 192 I--IITYNPKLTLLTFY--TYTLMTASIF-------LTMNTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGF 260
Cdd:PRK02504 317 IglVAGTEAGYASMVFYllAYLFMNLGAFacvilfsLRTGTDQISDYAGL---YQKDPLLTLGLSLCLLSLGGIPPLAGF 393
|
...
gi 927372340 261 LPK 263
Cdd:PRK02504 394 FGK 396
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
6.12e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 63.19 E-value: 6.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 33 LEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLTY----------PPACLLLTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVkmsenptvvaKIALALFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 102 IATKLGLAPFHFWFPEVLQG--SSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIMSI------ILGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALARVLFSIYGPAINLATVGWVIIIlgcltmFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 174 QTRKIMAFSSISHLGWMMI-----IITYNPklTLLTFYTYTLMTASIFLTMN--------------------TTNISKLS 228
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLglgvgLAALGD--PAMASYGEIALAGGIYHIVNhalykallfltagaviyetgTRNLNELG 387
|
250 260 270
....*....|....*....|....*....|....*...
gi 927372340 229 TLMTswtKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 388 GLAR---TMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-288 |
1.20e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 62.26 E-value: 1.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 50 PRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQW----DIAQLTYPPAC-----LLLTTAIATKLGLAPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 120 QGSSLTTALLLSTIMKLPPTTLLLI-------TSHSLNPILLtTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFnlplfpdASLYFAPVLA-ALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 193 -IITYNPKLT---LLTFYTYTLMTASIFLT-------MNTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFL 261
Cdd:TIGR01972 311 gIFSFNELGIsgaVFQMISHGLITAALFLLvgvlyerAHTRDIAKYGGL---ANKMPVLAAFFMLFAMASLGLPGTSGFV 387
|
250 260
....*....|....*....|....*..
gi 927372340 262 PKWLIIQELIKqeMTTTTMIISMASLL 288
Cdd:TIGR01972 388 GEFLILLGSFK--VNPVVAFLAALGIV 412
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
55-263 |
5.68e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 60.71 E-value: 5.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 55 AATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL-TYPPACLLLTTAIA-------TKLGLAPFHFWFPEVLQGSSLTT 126
Cdd:PRK12644 158 AALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELlADPPTGPAVSVAVVlilvgalSKSAIVPFHFWLPGAMAAPTPVS 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 127 ALLLSTIM---------KLPPTtllLITSHSLNPILLTtMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYN 197
Cdd:PRK12644 238 AYLHAAAMvkagiylvaRLAPG---FADVPVWRPTVLV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIG 313
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 927372340 198 PK------LTLLTfyTYTLMTASIFLTMN-------TTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 314 TRdaalagLAMLL--AHALFKAALFLVVGiidhstgTRDIRKLSGL---GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
38-194 |
9.30e-09 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 56.36 E-value: 9.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 38 LSIIPM---ISKSHHPRAIEAATKYFLVQAAASTLMLFS----STINAWHTGQWDIAQLTYPPACLLLTT--------AI 102
Cdd:PRK05846 142 AMLIPMyflIGVWGGKNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLLNLPLPPGVQYwlflaffiAF 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 103 ATKLGLAPFHFWFPEVLQ-----GSSLTTALLLST-------IMkLPpttLLLITSHSLNPILLTtMSIMSIILGGWMGL 170
Cdd:PRK05846 222 AVKMPMFPLHTWLPDAHVqaptaGSVLLAGILLKMgaygllrFS-LP---LFPDASHEFAPIIIT-LGVIAIIYGALVAL 296
|
170 180
....*....|....*....|....
gi 927372340 171 NQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK05846 297 AQTDIKKLIAYSSISHMGFVTLGI 320
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
1.67e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 55.99 E-value: 1.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 48 HHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLTYPPACL--------------LLTTAIATKLGLAPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplflitliLIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 114 WFPEVLQGSSLTTALLLSTIMkLPPTTLLLITSHSLNP------ILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHL 187
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATM-VKAGVYLVARIHPIFSgteawfILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 188 GWMMIIITYNPK------LTLLTFY--TYTLMTASIFLTMN-------TTNISKLSTLMtswTKTPMLNTTLMLTLLSLA 252
Cdd:PRK12649 315 AYLMTMYGYTTYhepglgVAAATFHllNHATFKACLFLVAGivaheaaTRDIRKLGGLR---KEMPITFIVASIAALAMA 391
|
250
....*....|.
gi 927372340 253 GLPPLTGFLPK 263
Cdd:PRK12649 392 GIPPLNGFLSK 402
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
97-263 |
1.39e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 53.12 E-value: 1.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 97 LLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNP-----ILLTTMSIMSIILGGWMGLN 171
Cdd:PRK12650 213 LIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDvavwnWLLIIVGMITALMGAVFAVQ 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 172 QTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYT----LMTASIFLTM-------NTTNISKLSTLmtsWTKTPML 240
Cdd:PRK12650 293 KTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFMLIgvvdhqaGTRDIRRLGSL---WRRMPFT 369
|
170 180
....*....|....*....|...
gi 927372340 241 NTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 370 FVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
91-266 |
2.19e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 52.61 E-value: 2.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 91 YPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSL--NPILLTTMSI---MSIILG 165
Cdd:PRK12647 194 YLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLggTPLWQTILPLfggLTMLTG 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 166 GWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTY----TLMTASIFLT-------MNTTNISKLSTLmtsW 234
Cdd:PRK12647 274 ALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVagiidheTGTRDITKLGGL---R 350
|
170 180 190
....*....|....*....|....*....|..
gi 927372340 235 TKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12647 351 RAMPITAAAALLAALSMAGLPPLFGFLAKELI 382
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-210 |
8.37e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 50.52 E-value: 8.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 13 ILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAA------STLMLFSSTINAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 87 AQLT-----YPPACLLLT-----TAIATKLGLAPFHFWFPEV-LQGSSLTTALLLSTIMKLPPTTLLLITS-------HS 148
Cdd:PRK08676 191 TELAahaslLSPSVLGASflfifIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 927372340 149 LNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTL 210
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-190 |
1.44e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 49.54 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 20 TITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYF---------------LVQAAASTLM------LFSSTINA 78
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIiicsvgvafalfgtiLVYANAATVMgdgemaILWTELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 79 wHTGQWDIAQLTYPPACLLLttAIATKLGLAPFHFWFPE-----------VLQGSSLTTAL---------LLSTIMKLPP 138
Cdd:PRK06458 204 -HASLLDPTLMKLAFVFLLI--GFGTKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALyavlryyilIDAAIGSDFP 280
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 927372340 139 TTLLLItshslnpillttMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWM 190
Cdd:PRK06458 281 GRLLLI------------FGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLI 320
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
72-311 |
2.25e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 49.31 E-value: 2.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 72 FSSTINAWHTGqwDIAQLTYPpaCLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITS----- 146
Cdd:MTH00020 194 FSSVFNMVVSA--PSSDITLI--CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSplfeq 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 147 HSLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIII-TYNPKLTLLTFYTYTLMTASIFLTMNTT--- 222
Cdd:MTH00020 270 APLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSViha 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 223 -----NISKLSTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQE-MTTTTMIISMASLLGLFFYLRL 296
Cdd:MTH00020 350 lsdeqDMRKMGGLISF---LPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYyLIFAYWLGCFSALLTAFYSIRL 426
|
250
....*....|....*
gi 927372340 297 AYCSTITlppNPSSK 311
Cdd:MTH00020 427 IYLTFLS---NTNLK 438
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-308 |
2.53e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 48.87 E-value: 2.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 34 EINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLTY--------PP---ACLLLTTAI 102
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNallvnptsPViygGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 103 ATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLIT-----SHSLNPI---LLTTMSIMSIILGGWMGLNQTQ 174
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPSaqgVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 175 TRKIMAFSSISHLGWMMIIITYNPKLT----LLTFYTYTLMTASIFL-------TMNTTNISKLSTLMTSwtkTPMLNTT 243
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGivagIFHAINHVIYKSALFLgagivsyRTKTSNLRKLGGLLPV---MPVVAFM 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 927372340 244 LMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYcsTITLPPNP 308
Cdd:PRK06277 367 VLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKP 429
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
2.62e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 48.87 E-value: 2.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 55 AATKYFLVQAAASTLMLFSSTINAWHTGQ--WDIAQLT---YPPACLLLT-----TAIATKLGLAPFHFWFPEVL-QGSS 123
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGaksYPLALELLLyagflIAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 927372340 124 LTTALLLSTIMKLPPTTL------LLITSHSLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGI 294
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-291 |
3.64e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 48.57 E-value: 3.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 59 YFLVQAAASTLMLFSSTINAW-HTGQWDIAQLTYPPAC-----LLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLST 132
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 133 IM-KLPPTTLLLITSHSLNP-----ILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLG--------WMMIIITYNP 198
Cdd:PRK08667 246 VMlKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 199 KLTLLT-------------FYTYTLMTA-SIFLTMNTTNISKLSTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK08667 326 TLALLAlggalfhslnhalFKSLLFLTAgSVVHATGTRNIEKMGGLVKL---MPYTSALFLVGAVSIAALPPFNGFASEL 402
|
250 260
....*....|....*....|....*...
gi 927372340 265 LIIQELIKQEMTTTTMI-ISMASLLGLF 291
Cdd:PRK08667 403 LLYESFFQSFSVADPLIkILLFSVLAIF 430
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
91-272 |
5.72e-06 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 48.21 E-value: 5.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 91 YPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLitshSLNPIL---------LTTMSIMS 161
Cdd:PRK12646 209 FIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLF----RFTPLLglsnmyiyiVTFVGLIT 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 162 IILGGWMGLNQTQTRKIMAFSSISHLGWMMIII------TYNPKLTLLTFYTYTLMtASIFLTMN--------------- 220
Cdd:PRK12646 285 MLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggyAQHQQDAIASIYVFVLF-AALFHLMNhaifkcalfmgvgii 363
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 927372340 221 -----TTNISKLSTLMTSWtktPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIK 272
Cdd:PRK12646 364 dheagTRDIRILSGMRQLF---PKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-296 |
7.24e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 47.42 E-value: 7.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL-----------TYPPACLLLTTA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMfliiqdlptnrAIQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 102 IATKLGLAPFHFWFPEVLQG---------SSLTTALLLSTIMKLPPTTL---LLITSHSLNPILLTtMSIMSIILGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEapsfisvffSGTSTKVMIYLIIRIVYDVFkanFVFTTLPFNNVFMI-LAALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 170 LNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTY----TLMTASIFLTM-------NTTNISKLSTLmtsWTKTP 238
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSgsisyhfGTTKLEDCLNL---WKSMP 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 927372340 239 MLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
1.50e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 46.48 E-value: 1.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL-TYPPACL-LLTTAIATKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLaTADPEAFaLIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 111 FHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPI--LLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 189 WMMIIITYNPKLTLltfyTYTLMTASIFL---TMNTTNISKL-STLMTSWTKTPmlnttLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK07234 283 FILAAPLVGGLYAL----AHGLVKSTLFLcagALPSRNFTELiSQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKV 353
|
....*..
gi 927372340 265 LIIQELI 271
Cdd:PRK07234 354 LTLKNLL 360
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
103-268 |
3.63e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 45.33 E-value: 3.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 103 ATKLGLapfHFWFPEVLQGSSLTTALLLSTIMKLPPTTLL-----LITSHSLNPILLTTMSIMSIILGGWMGLNQTQTRK 177
Cdd:MTH00032 239 SAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsfpLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKK 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 178 IMAFSSISHLGWMMIIITY--NPKLTLLTFYTYTLMTASIFL---------TMNTTNISKLSTLMTSwtkTPMLNTTLML 246
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLsagsvihstTVDEQDMRKMGGLIHS---IPFTYTMMLI 392
|
170 180
....*....|....*....|..
gi 927372340 247 TLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 393 GSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
4.61e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 45.08 E-value: 4.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 55 AATKYFLVQAAASTLMLFSSTINAWHTG--QWDIAQL---TYPPAC-LLLTTAI----ATKLGLAPFHFWFPEV-LQGSS 123
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTqLLLLAPIlvgfGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 124 LTTALLLSTIMKLPPTTLL------LITSHSLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYN 197
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 198 PKLTLLT----FYTYTLMTASIFLTM-------NTTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 318 TPLSILAavfqMISHGLISALLFLLVgvvykktGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-296 |
6.87e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 44.55 E-value: 6.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 58 KYFLVQAAASTL------MLFS--STINAWHTGQwDIAQLTYPPACLLLTTAI------ATKLGLAPFHFWFPEVLQG-- 121
Cdd:PRK07691 162 KYVLINVVSSAFfvvavaILYSvvGTLNMADISV-KIAELSAGQTGLITVVAIlflfvfATKAGLFPLYFWLPGSYYApp 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 122 ---SSLTTALL----LSTIMKLppTTLLLITSHSLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK07691 241 iaiAALFGALLtkvgVYAIART--FTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGV 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 195 TYNPKLTLLTFYTYT----LMTASIFLTM-------NTTNISKLSTLMTSWtktPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK07691 319 AMMTESGMIGAIYYLihdmIVKAALFLLIgimikitGTTDLKKMGGLIKRY---PVLGWMFFIAALSLAGIPPLSGFYGK 395
|
250 260 270
....*....|....*....|....*....|...
gi 927372340 264 WLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:PRK07691 396 FFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
95-300 |
9.98e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 43.87 E-value: 9.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 95 CLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIMSI-----ILGGWMG 169
Cdd:MTH00209 178 SVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLgslttLMASMSA 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 170 LNQTQTRKIMAFSSISHLGWMMIIITYN-PKLTLLTFYTYTLMTASIFLT--------MNTTNISKLSTLmtsWTKTPML 240
Cdd:MTH00209 258 NVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFICagniihshGHSQDIRMVGNL---WYQMPIT 334
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 927372340 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASL-LGLFFYLRLAYCS 300
Cdd:MTH00209 335 SICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSYFS 395
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-268 |
2.33e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 42.78 E-value: 2.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 96 LLLTTAI----ATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPIL-------LTTMSIMSIIL 164
Cdd:PRK07363 205 LILLTGLllgfGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTwslvapgLAIIGTISVIY 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 165 GGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLL----TFYTYTLMTASIF-------LTMNTTNISKLSTLMTS 233
Cdd:PRK07363 285 GALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLgavaQMISHGLILALLFhlvgiveRKVGTRDLDVLNGLMNP 364
|
170 180 190
....*....|....*....|....*....|....*
gi 927372340 234 WTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07363 365 IRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
7-281 |
3.07e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.47 E-value: 3.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 7 LISTLSI-LLGTTITITSNHWTTAWAGLEINTLS---IIPMISKSHHPRAIeaatkyFLVQAAASTLMLFSSTINAWH-T 81
Cdd:PRK06459 74 LSSLYILtILGMAIVLTSDNYLLFLAGWEIMTIPsyvAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 82 GQWDIAQLTYPPACLLLTTAIATKLGLAPFHF--WFPEVLQGSSLTTALLLSTIMKL-------PPTTLLLITSHSLNPI 152
Cdd:PRK06459 148 GTTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLmgvygilKMTILTQTIPIGYFGL 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 153 LLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMI-----IITYNPKLTLLTFYTYTLMTASI-------FLTMN 220
Cdd:PRK06459 228 TILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVILYSFahsvaktGLFLS 307
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 927372340 221 TTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMI 281
Cdd:PRK06459 308 SGLQEKQSITYSKKIRNRWIELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVLHNVI 368
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
69-300 |
4.82e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 41.86 E-value: 4.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 69 LMLFSSTINAWHTGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLitshS 148
Cdd:MTH00211 181 MVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLI----R 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 149 LNPILLTTMSIMSIIL---------GGWMGLNQTQTRKIMAFSSISHLGWMMIIITYN-PKLTLLTFYTYTLMTASIFL- 217
Cdd:MTH00211 257 LSPLFQNNQLILGAVLllgaltmlfGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNqPQLAFLHICTHAFFKAMLFMc 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 218 -------TMNTTNISKLSTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIIS-MASLLG 289
Cdd:MTH00211 337 sgsiihgLNNEQDIRKMGGLSKN---LPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTlLATSLT 413
|
250
....*....|.
gi 927372340 290 LFFYLRLAYCS 300
Cdd:MTH00211 414 AAYSFRLIFLS 424
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-296 |
7.60e-04 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 41.09 E-value: 7.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 53 IEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL-----------TYPPACLLLTTAIATKLGLAPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndmgdtaTLTTIALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 122 SSLTTALLLSTIMK-------LPPTTLLLITSHSLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK12663 236 PNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 195 TYNPKLTL--LTFY---TYTLMTASIFLT---MNTTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12663 316 ALGTPAGIngAIFYlvhDMVVKTALFLIAgslVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
250 260 270
....*....|....*....|....*....|
gi 927372340 267 IQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:PRK12663 396 VQGALDNGAYILLALMLITSLITMYSLFRI 425
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
14-192 |
1.17e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 40.45 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 14 LLGTTITITSNHWTT---AWAGLEI---NTLSIIPmisksHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIA 87
Cdd:PRK08168 110 LAAVHLLVLSDHLLVliaAWAAISLalhRLLCFYP-----DRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLS 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 88 QL-----TYPP------ACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTL-----LLITSHSLNP 151
Cdd:PRK08168 185 ALwahlaAQGAspslqaAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGGFVLirfapLLEQAPPARW 264
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 927372340 152 ILLtTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMI 192
Cdd:PRK08168 265 LLV-LVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
91-291 |
1.64e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 40.17 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 91 YPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLitshSLNPIL---------LTTMSIMS 161
Cdd:PRK12648 206 YPPALVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLA----RLWPVLagteewfwiVGGAGLIT 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 162 IILGGWMGLNQTQTRKIMAFSSISHLGwmmiIITynpklTLLTFYTYTLMTASIFLTMN--------------------T 221
Cdd:PRK12648 282 LLLGAYFALFQHDLKGLLAYSTISHLG----LIT-----LLLGLGSPLAAVAAIFHIINhatfkaslfmaagiidhetgT 352
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 927372340 222 TNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTT--TMIISMASLLGLF 291
Cdd:PRK12648 353 RDMRRLSGL---RRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAETLDTHLLGSldWLLPVAATLAGAF 421
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
1.71e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.20 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 107 GLAPFHFWFPEVLQGSSLTTALLLSTI-MKLPPTTLLLITSHSLNP-----ILLTTMSIMSIILGGWMGLNQTQTRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAplwwgVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 181 FSSISHLGWMMI--------IITYNPKLTLLTFY--TYTLMTASIFLTM---------NTTNISKLSTLMTSWTKTPMLN 241
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLVggLYHLLNHSLFKSVlflgagsvwFRTGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 927372340 242 TTLMLTLLSLAGLPPLTGFLPKWLIIQELIK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
2.53e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 39.69 E-value: 2.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 55 AATKYFLVQAAASTLMLFSSTINAWHTGQ-----WDIAQLTYPPACLLLT-----TAIATKLGLAPFHFWFPEVLQGSSL 124
Cdd:PRK02546 166 AATKFILYTAGSSLFILLAALAMAFYGDTptfdmTALAAKDFGLGFQLLCyagllIAYGVKLPIVPLHTWLPDAHGEATA 245
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 927372340 125 TTALLLSTIM-KLPPTTLL------LITSHSLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK02546 246 PVHMLLAGILlKMGGYALLrmnagmLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGI 322
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-285 |
3.46e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 39.03 E-value: 3.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 11 LSILLGTTITITSNHWTTaWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTI---NAWHTGQW-DI 86
Cdd:PRK06589 124 LTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIliyTKTGNLDFvSG 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 87 AQLTYPPACLLLTTAIA--TKLGLAPFHFWFPEVLQGSSLTTALLLSTIM----KLPPTTLLLITSHSLNPILLTTMS-- 158
Cdd:PRK06589 203 GLFSKNQSIILLLMFIYgiAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQRIFAEFnw 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 159 -----IMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMII--ITYNPKLTLLTFY--TYTLMTASIFLTMNTTNISK--- 226
Cdd:PRK06589 283 lifipIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSafILTPKALGAAILHlvSHSFAKICLFYSMGSIYSLKked 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 227 -LSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMA 285
Cdd:PRK06589 363 qVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLV 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-227 |
8.75e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 37.98 E-value: 8.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 101 AIATKLGLAPFHFWFPEVLQGSSLTTALLLSTI-MKLPPTTLLLIT-------SHSLNPILLtTMSIMSIILGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIlLKLGGYGLVRLSwpilplgAQNLAPAVI-AMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 927372340 173 TQTRKIMAFSSISHLGWMMIIITYNPKLTLltfytytlmTASIFLTMNTTNISKL 227
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGL---------TGSIFIMLAHGIVSSL 363
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
95-311 |
9.41e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 37.68 E-value: 9.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 95 CLLLTTAIATK---LGLapfHFWFPEVLQGSSLTTALLLSTIMkLPPTTLLLITSHSL---NPILLTTMSI---MSIILG 165
Cdd:MTH00210 214 CLLLFIGAVGKsaqLGL---HTWLPDAMEGPTPVSALIHAATM-VTAGVFLIIRSGPLfegSPLALTIVTIlgaLTAFFA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372340 166 GWMGLNQTQTRKIMAFSSISHLGWM-MIIITYNPKLTLLTFYTYTLMTASIFLTMNTT--------NISKLSTLMTSwtk 236
Cdd:MTH00210 290 ATVGVVQNDLKKVIAYSTCSQLGYMvMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVihavsdeqDMRKMGGLIKS--- 366
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 927372340 237 TPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIqELI--KQEMTTTTMIISMASLLGLFFYLRLAYCSTITlppNPSSK 311
Cdd:MTH00210 367 IPFTYVMILIGSLSLMGFPYLTGFYSKDLIL-ELTydKYYIAFAYWLGSFSALLTAFYSIRLIYLTFIT---NTNSK 439
|
|
| |
