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Conserved domains on  [gi|938339321|ref|YP_009171522|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Pseudothericles compressifrons]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 6-91 2.59e-22

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 82.51  E-value: 2.59e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339321  6 LFLSMFTYFCGVYVFSSKRKHLLMVLLSLEYIVISLFFLVIYYLTYFDYELFFAVVFLVFSVCEGALGLSILVSMIRSYG 85
Cdd:MTH00162  4 LLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHG 83


                ....*.
gi 938339321 86 NDFFNS 91
Cdd:MTH00162 84 NDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 6-91 2.59e-22

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 82.51  E-value: 2.59e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339321  6 LFLSMFTYFCGVYVFSSKRKHLLMVLLSLEYIVISLFFLVIYYLTYFDYELFFAVVFLVFSVCEGALGLSILVSMIRSYG 85
Cdd:MTH00162  4 LLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHG 83


                ....*.
gi 938339321 86 NDFFNS 91
Cdd:MTH00162 84 NDYFSS 89
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
6-93 1.18e-07

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 45.25  E-value: 1.18e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339321   6 LFLSMFTYFCGVYVFSSkRKHLLMVLLSLEYIVISLFFLVIYYLTYFDYELFFAVVF--LVFSVCEGALGLSILVSMIRS 83
Cdd:pfam00420  3 LLLSGLLFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILtaIVIAAAEAAVGLALLVRIYRT 81

                         90
                 ....*....|
gi 938339321  84 YGNDFFNSFS 93
Cdd:pfam00420 82 HGTDDVDSLN 91
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 6-91 2.59e-22

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 82.51  E-value: 2.59e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339321  6 LFLSMFTYFCGVYVFSSKRKHLLMVLLSLEYIVISLFFLVIYYLTYFDYELFFAVVFLVFSVCEGALGLSILVSMIRSYG 85
Cdd:MTH00162  4 LLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHG 83


                ....*.
gi 938339321 86 NDFFNS 91
Cdd:MTH00162 84 NDYFSS 89
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 1-97 4.76e-13

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 59.22  E-value: 4.76e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339321  1 MFSLTLFLSMFTYFCGVYVFSSKRKHLLMVLLSLEYIVISLFFLVIYYLTYFDYELFFAVVFLVFSVCEGALGLSILVSM 80
Cdd:MTH00188  1 MFFSMILVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSL 80

                        90
                ....*....|....*..
gi 938339321 81 IRSYGNDFFNSFSFSLC 97
Cdd:MTH00188 81 IRSHGSDYVSSLNLIKC 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-97 7.99e-12

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 56.01  E-value: 7.99e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339321  1 MFSLTLFLSMFTYFCGVYVFSSKRKHLLMVLLSLEYIVISLFFLVIYYLTYFDYELFFAVVFLVFSVCEGALGLSILVSM 80
Cdd:MTH00149  1 SMFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSL 80

                        90
                ....*....|....*..
gi 938339321 81 IRSYGNDFFNSFSFSLC 97
Cdd:MTH00149 81 IRLHGNDYVSSLSSLKF 97
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 2-97 5.56e-11

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 53.99  E-value: 5.56e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339321  2 FSLTLFLSMFTYFCGVYVFSSKRKHLLMVLLSLEYIVISLFFLVIYYLTYFD-YELFFAVVFLVFSVCEGALGLSILVSM 80
Cdd:MTH00013  1 MMSPLFILSISPFISMFNLSLQRKHLLMSLLSLEAMILSLALFIPLSLMFANqVNGMLAIVLLTFGACEASLGLSLLVLM 80

                        90
                ....*....|....*..
gi 938339321 81 IRSYGNDFFNSFSFSLC 97
Cdd:MTH00013 81 TRSYGNDMLKSLTSNKC 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
6-93 1.18e-07

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 45.25  E-value: 1.18e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339321   6 LFLSMFTYFCGVYVFSSkRKHLLMVLLSLEYIVISLFFLVIYYLTYFDYELFFAVVF--LVFSVCEGALGLSILVSMIRS 83
Cdd:pfam00420  3 LLLSGLLFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILtaIVIAAAEAAVGLALLVRIYRT 81

                         90
                 ....*....|
gi 938339321  84 YGNDFFNSFS 93
Cdd:pfam00420 82 HGTDDVDSLN 91
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 3-97 2.01e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 44.84  E-value: 2.01e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339321  3 SLTLFLSMFTYFCGVYVFSSKRKHLLMVLLSLEYIVISLFFLVIYYLTYFDYELFFA--VVFLVFSVCEGALGLSILVSM 80
Cdd:MTH00125  2 TPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPmpIILLTFSACEAGTGLALLVAT 81

                        90
                ....*....|....*..
gi 938339321 81 IRSYGNDFFNSFSFSLC 97
Cdd:MTH00125 82 TRTHGSDHLKNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 3-87 3.16e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 41.51  E-value: 3.16e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339321  3 SLTLFLSMFTYFCGVYVFSSKRKHLLMVLLSLEYIVISLFFLVIYYLTYFDYELFFA--VVFLVFSVCEGALGLSILVSM 80
Cdd:MTH00067  2 SPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSlpMFMLTFSACEASTGLALMVAT 81


                ....*..
gi 938339321 81 IRSYGND 87
Cdd:MTH00067 82 TRTHGTD 88
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 24-97 1.57e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 39.95  E-value: 1.57e-05
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 938339321 24 RKHLLMVLLSLEYIVISLFFLVIYYLTYFDYELFFA--VVFLVFSVCEGALGLSILVSMIRSYGNDFFNSFSFSLC 97
Cdd:MTH00126 23 RTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAapMLLLAFSACEASAGLALLVATARTHGTDRLQNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 24-88 1.89e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 39.53  E-value: 1.89e-05
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 938339321 24 RKHLLMVLLSLEYIVISLFFLVIYYLTYFDYELFFAV--VFLVFSVCEGALGLSILVSMIRSYGNDF 88
Cdd:MTH00107 23 RSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMpiILLVFAACEAAVGLALLVMVSNTYGTDY 89
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 4-93 4.22e-05

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 38.75  E-value: 4.22e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339321  4 LTLFLSMFTYFCGVYVFSSKRKHLLMVLLSLEYIVISLFFLVIYYLTYFDYELF--FAVVFLVFSVCEGALGLSILVSMI 81
Cdd:MTH00043  3 IILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNlsFSLLLLTLSACEASIGLSLMVLLS 82

                        90
                ....*....|..
gi 938339321 82 RSYGNDFFNSFS 93
Cdd:MTH00043 83 RNHNSDLVASLN 94
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 5-93 1.02e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 37.62  E-value: 1.02e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339321  5 TLFLSMFTYFCGVYVFSSKRKHLLMVLLSLEYIVISLFFLVIYY--LTYFDYELFFAVVFLVFSVCEGALGLSILVSMIR 82
Cdd:MTH00181  1 MMFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFslLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNR 80

                        90
                ....*....|.
gi 938339321 83 SYGNDFFNSFS 93
Cdd:MTH00181 81 THGSDHLLKFN 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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