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Conserved domains on  [gi|938339404|ref|YP_009171569|]
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ATP synthase F0 subunit 6 (mitochondrion) [Mirhipipteryx andensis]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 1.48e-99

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 288.22  E-value: 1.48e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   1 MVNLFSSFDPSTSiLSLSLNWISSIIGLLCLPICYWFIPSRFNLIWSLITSTLFKEFKVLIGPKgHLGTTLIFIALFSLI 80
Cdd:MTH00157   2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  81 MFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLAVR 160
Cdd:MTH00157  80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938339404 161 LAANMIAGHLLLTLLGNTGPSLMIISVQFLLLAQLALLMLETAVAIIQSYVFTVLSTLYSSEVY 224
Cdd:MTH00157 160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 1.48e-99

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 288.22  E-value: 1.48e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   1 MVNLFSSFDPSTSiLSLSLNWISSIIGLLCLPICYWFIPSRFNLIWSLITSTLFKEFKVLIGPKgHLGTTLIFIALFSLI 80
Cdd:MTH00157   2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  81 MFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLAVR 160
Cdd:MTH00157  80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938339404 161 LAANMIAGHLLLTLLGNTGPSLMIISVQFLLLAQLALLMLETAVAIIQSYVFTVLSTLYSSEVY 224
Cdd:MTH00157 160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-224 7.72e-48

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 156.98  E-value: 7.72e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404    4 LFSSFDPST-SILSLSLNWISSIIGLLCLPI----CYWFIPSRFNLIWSLITSTLFKEFKVLIGPKGHlGTTLIFIALFS 78
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLIssslSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKG-KFFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   79 LIMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLA 158
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 938339404  159 VRLAANMIAGHLLLTLLGNTGPSLMIISV-QFLLLAQLALLMLETAVAIIQSYVFTVLSTLYSSEVY 224
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSSAIfALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 70-221 2.40e-40

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 135.22  E-value: 2.40e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  70 TLIFIALFSLIMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETIS 149
Cdd:cd00310    5 LPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELIS 84

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 938339404 150 NIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLMIISVQFLLLAQLALLMLETAVAIIQSYVFTVLSTLYSS 221
Cdd:cd00310   85 ELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
21-221 2.69e-27

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 103.34  E-value: 2.69e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   21 WISSIIGLLCLPICYW----FIPSRFNLIWSLITSTLFKEFKVLIGPKGHLGTTLIFIALFSLIMFNNLLGLF---PYIF 93
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   94 TSSSHMSMTFSLALPLWLSFMLFGWINH-TKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLL 172
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 938339404  173 TLLGNTGPSLMIISVQFLLLAQLALLML---ETAVAIIQSYVFTVLSTLYSS 221
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPPLLGVAWtlfELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 38-219 3.26e-21

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 87.44  E-value: 3.26e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  38 IPSRFNLIWSLITSTLFKEFKVLIGPKGHLGTTLIFiALFSLIMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFG 117
Cdd:COG0356   27 VPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLL-TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYG 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404 118 WINH-TKHMFAHLVPQGTPsVLMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLMIISVQFllLAQLA 196
Cdd:COG0356  106 IKKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSL--LLPVA 182

                        170       180
                 ....*....|....*....|...
gi 938339404 197 LLMLETAVAIIQSYVFTVLSTLY 219
Cdd:COG0356  183 WTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 1.48e-99

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 288.22  E-value: 1.48e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   1 MVNLFSSFDPSTSiLSLSLNWISSIIGLLCLPICYWFIPSRFNLIWSLITSTLFKEFKVLIGPKgHLGTTLIFIALFSLI 80
Cdd:MTH00157   2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  81 MFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLAVR 160
Cdd:MTH00157  80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938339404 161 LAANMIAGHLLLTLLGNTGPSLMIISVQFLLLAQLALLMLETAVAIIQSYVFTVLSTLYSSEVY 224
Cdd:MTH00157 160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-224 2.61e-52

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 168.29  E-value: 2.61e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   1 MVNLFSSFDPSTSIL--SLSLNWISSIIGLLCLPICYWFIPSRFNLIWsLITSTLFKEFKVLIGPKGHLGTTLIFIALFS 78
Cdd:MTH00176   2 LVDLFSSFDPPNKNIfsMISLSWITLLLFLLLMPSSVWFCPSKLQVFM-LMFSTFLPEMILRSNGSYILGSASIIISLFI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  79 LIMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLA 158
Cdd:MTH00176  81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 938339404 159 VRLAANMIAGHLLLTLLGNTGPSL---MIISVQFLLLAQLALLMLETAVAIIQSYVFTVLSTLYSSEVY 224
Cdd:MTH00176 161 VRLAANLSAGHLLLGLLGAAMWGLlpvSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-224 7.72e-48

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 156.98  E-value: 7.72e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404    4 LFSSFDPST-SILSLSLNWISSIIGLLCLPI----CYWFIPSRFNLIWSLITSTLFKEFKVLIGPKGHlGTTLIFIALFS 78
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLIssslSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKG-KFFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   79 LIMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLA 158
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 938339404  159 VRLAANMIAGHLLLTLLGNTGPSLMIISV-QFLLLAQLALLMLETAVAIIQSYVFTVLSTLYSSEVY 224
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSSAIfALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 70-221 2.40e-40

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 135.22  E-value: 2.40e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  70 TLIFIALFSLIMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETIS 149
Cdd:cd00310    5 LPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELIS 84

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 938339404 150 NIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLMIISVQFLLLAQLALLMLETAVAIIQSYVFTVLSTLYSS 221
Cdd:cd00310   85 ELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-222 4.12e-37

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 129.32  E-value: 4.12e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   3 NLFSSFDPSTsILSLSLNWISSIIGLLCLPICY--WFIPSRFNLIWSLITSTLFKEFKVLIGPKGHLGTTLIFiALFSLI 80
Cdd:MTH00035   6 SIFGQFSPDT-ILFIPLTLLSSVIALSWLFFINptNWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLT-TVFILI 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  81 MFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLAVR 160
Cdd:MTH00035  84 LSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLR 163

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938339404 161 LAANMIAGHLLLTLLGNTGPSLMIISVQFLLLAQLALL--MLETAVAIIQSYVFTVLSTLYSSE 222
Cdd:MTH00035 164 LAANLTAGHLLIFLLSTAIWELSNSPLISIITLIIFFLlfILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-222 7.34e-37

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 128.83  E-value: 7.34e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   1 MVNLFSSFDPSTSILSL--SLNWISSIIGLLCLPICYWFIPSRFNLIWSLITSTLFKEFKVLIGpKGHLGTTLIFIALFS 78
Cdd:MTH00173   2 MVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSG-LNLGGFSLLLSSLFL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  79 LIMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLA 158
Cdd:MTH00173  81 FLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLT 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 938339404 159 VRLAANMIAGHLLLTLLGNTGPSL----MIISVQFLLLAQLALLMLETAVAIIQSYVFTVLSTLYSSE 222
Cdd:MTH00173 161 VRLLANISAGHIVLTLIGNYLSSSlfssSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-222 3.73e-36

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 127.16  E-value: 3.73e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   1 MVNLFSSFDPSTSIL----SLSLNWISSIIGLLCLPICYWFIPSRFNLIWSLITSTLFKEFKVLIGpKGHLGTTLIFIAL 76
Cdd:MTH00005   2 LTDIFSSFDPATNSLfnnlSSTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISAL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  77 FSLIMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGT 156
Cdd:MTH00005  81 FTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPIT 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 938339404 157 LAVRLAANMIAGHLLLTLLGNTGPSLM---IISVQFLLLAQLALLMLETAVAIIQSYVFTVLSTLYSSE 222
Cdd:MTH00005 161 LSFRLAANMSAGHIVLSLIGIYAASALfssISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-222 4.91e-35

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 123.90  E-value: 4.91e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   1 MVNLFSSFDpSTSILSLSLNWISSIIGLLCLPICY-WFIPSRFNLIWSLITSTLFKEFKVLIGPKGHLGTtLIFIALFSL 79
Cdd:MTH00179   2 MLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSLTnRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLMLF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  80 IMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLAV 159
Cdd:MTH00179  80 LLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGV 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 938339404 160 RLAANMIAGHLLLTLLGNTGPSLMIIS---VQFLLLAQLALLMLETAVAIIQSYVFTVLSTLYSSE 222
Cdd:MTH00179 160 RLTANITAGHLLMHLISSAVFVLMNFMgmvALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-222 6.28e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 121.08  E-value: 6.28e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   1 MVNLFSSFDpSTSILSLSLNWISSIIGLLCLPI-CYWFIPSRFNLIWSLITSTLFKEFKVLIGPKGHlGTTLIFIALFSL 79
Cdd:MTH00120   2 NLNFFDQFS-SPELLGIPLILLAMLIPALLIPSpKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGH-KWALILTSLMLL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  80 IMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLAV 159
Cdd:MTH00120  80 LLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGV 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 938339404 160 RLAANMIAGHLLLTLLGNTGPSLMIISVQFLLLAQLALL---MLETAVAIIQSYVFTVLSTLYSSE 222
Cdd:MTH00120 160 RLTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLlltILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 3-219 4.28e-33

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 118.90  E-value: 4.28e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   3 NLFSSFDPSTsILSLSLNWISSIIGLLCLPICYWFIPSRFNLIWSLITSTLFKEFKVLIGPKGHLGTTLifiaLFSLIMF 82
Cdd:MTH00101   4 NLFASFITPT-ILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLM----LMSLILF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  83 ---NNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLAV 159
Cdd:MTH00101  79 igsTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 938339404 160 RLAANMIAGHLLLTLLGNTGPSLMIISVQFLLLAQLALL---MLETAVAIIQSYVFTVLSTLY 219
Cdd:MTH00101 159 RLTANITAGHLLIHLIGGATLALMSISTTTALITFIILIlltILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-222 5.94e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 110.83  E-value: 5.94e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   1 MVNLFSSFDPSTS------ILSLSLNWIssiigLLCLPICYWfIPSRFNLIWSLITSTLFKEFKVLIGPKGHlGTTLIFI 74
Cdd:MTH00073   2 NLSFFDQFLSPTLlgipliMLAMLLPWL-----LFPTPTNKW-LNNRLSTLQIWFLQNFTKQLMLPLNTPGH-KWALILT 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  75 ALFSLIMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRP 154
Cdd:MTH00073  75 SLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRP 154

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 938339404 155 GTLAVRLAANMIAGHLLLTLLGNTG---PSLMIISVQFLLLAQLALLMLETAVAIIQSYVFTVLSTLYSSE 222
Cdd:MTH00073 155 LALGVRLTANLTAGHLLIQLISTATlvlLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 71-222 1.62e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 109.58  E-value: 1.62e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  71 LIFIALFSLIMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISN 150
Cdd:MTH00132  71 LLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISL 150

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 938339404 151 IIRPGTLAVRLAANMIAGHLLLTLLGNTG----PSLMIISVqFLLLAQLALLMLETAVAIIQSYVFTVLSTLYSSE 222
Cdd:MTH00132 151 FIRPLALGVRLTANLTAGHLLIQLIATAAfvllPLMPTVAI-LTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP-synt_A pfam00119
ATP synthase A chain;
21-221 2.69e-27

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 103.34  E-value: 2.69e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   21 WISSIIGLLCLPICYW----FIPSRFNLIWSLITSTLFKEFKVLIGPKGHLGTTLIFIALFSLIMFNNLLGLF---PYIF 93
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   94 TSSSHMSMTFSLALPLWLSFMLFGWINH-TKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLL 172
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 938339404  173 TLLGNTGPSLMIISVQFLLLAQLALLML---ETAVAIIQSYVFTVLSTLYSS 221
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPPLLGVAWtlfELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 18-219 1.54e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 99.35  E-value: 1.54e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  18 SLNWISSIIGLLCLPICYWFIPSRFNLIWSLITSTLFKEFKVLIGPKGHLGTTLIfIALFSLIMFNNLLGLFPYIFTSSS 97
Cdd:MTH00172  21 SIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVFTPTT 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  98 HMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLLTLLGN 177
Cdd:MTH00172 100 HIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAG 179

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 938339404 178 TGPSLMIISV---QFLLLAQLALLMLETAVAIIQSYVFTVLSTLY 219
Cdd:MTH00172 180 FGFNMLCASGflsLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIY 224
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 9-219 3.54e-23

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 93.53  E-value: 3.54e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404   9 DPSTSILSLSLNWISSIIGLLCLPICYWFIPSRFNLIWSLITSTLFKEFKVLIGPKGHLGTTLIFiALFSLIMFNNLLGL 88
Cdd:MTH00175  23 DWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFIL-SLFLFIAILNILGL 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  89 FPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLAVRLAANMIAG 168
Cdd:MTH00175 102 FPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAG 181

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 938339404 169 HLLLTLLG----NTGPSLMIISVQFLLLAQLALLMLETAVAIIQSYVFTVLSTLY 219
Cdd:MTH00175 182 HLLFAILSgfafNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIY 236
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 38-219 3.26e-21

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 87.44  E-value: 3.26e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  38 IPSRFNLIWSLITSTLFKEFKVLIGPKGHLGTTLIFiALFSLIMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFG 117
Cdd:COG0356   27 VPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLL-TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYG 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404 118 WINH-TKHMFAHLVPQGTPsVLMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLMIISVQFllLAQLA 196
Cdd:COG0356  106 IKKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSL--LLPVA 182

                        170       180
                 ....*....|....*....|...
gi 938339404 197 LLMLETAVAIIQSYVFTVLSTLY 219
Cdd:COG0356  183 WTAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 37-219 1.33e-17

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 78.83  E-value: 1.33e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  37 FIPSRFNLIWSLITSTLFKEFKVLIGPKGhlGTTLIFI-ALFSLIMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFML 115
Cdd:MTH00174  59 LVPNRILVGLELIYSHFYTVLKDNLGNKG--GNYLAFVlSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTL 136

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404 116 FGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSL----MIISVQFLL 191
Cdd:MTH00174 137 AGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMintgILIGSFVPF 216

                        170       180
                 ....*....|....*....|....*...
gi 938339404 192 LAQLALLMLETAVAIIQSYVFTVLSTLY 219
Cdd:MTH00174 217 AILIFVTILEMAVAIIQAYVFTLLTIVY 244
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 38-219 2.99e-15

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 71.75  E-value: 2.99e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  38 IPSRFNLIWSLITSTLFKEFKVLIGPKGHLGTTLIFiALFSLIMFNNLLGLFP-YIFTSSSHMSMTFSLALPLWLSFMLF 116
Cdd:PRK05815  42 VPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAF-TLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYY 120

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404 117 G-WINHTKHMFAHLVPQgtpsvLMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLLTLLGnTGPSLMIISVQFLLLAQL 195
Cdd:PRK05815 121 GiKKKGLGGYLKEFYLQ-----PHPLLLPIEIISEFSRPISLSLRLFGNMLAGELILALIA-LLGGAGLLLALAPLILPV 194

                        170       180
                 ....*....|....*....|....
gi 938339404 196 ALLMLETAVAIIQSYVFTVLSTLY 219
Cdd:PRK05815 195 AWTIFEIFVGTLQAYIFMMLTIVY 218
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 74-219 5.17e-10

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 58.22  E-value: 5.17e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  74 IALFSLIMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINH-TKHMFAHLVpQGTPSVLMPFMVCIETISNII 152
Cdd:PRK13419 175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHgIKGYLAHLT-GGTHWSLWIIMIPIEFIGLFT 253

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 938339404 153 RPGTLAVRLAANMIAGHLLLTllgntgpSLM---------IISVQFLLLAQLALLMLETAVAIIQSYVFTVLSTLY 219
Cdd:PRK13419 254 KPFALTVRLFANMTAGHIVIL-------SLIfisfilksyIVAVAVSVPFAIFIYLLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 73-222 3.60e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 46.12  E-value: 3.60e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  73 FIALFSLIMFNnLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKhmFAHLVPQGTPSVLMPF-MVCIETISNI 151
Cdd:MTH00087  56 FFTFIVLLLFC-FGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSEK--FSVYLSKGSDSFLKTFsMLFVEIVSEL 132

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 938339404 152 IRPGTLAVRLAANMIAGHLLLTLLGNTGPSLMIISVqflllaqlALLMLETAVAIIQSYVFTVLSTLYSSE 222
Cdd:MTH00087 133 SRPLALTLRLTVNLMVGHLISSLLNFLGEKYVWLSI--------LAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 94-219 3.18e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 44.11  E-value: 3.18e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  94 TSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETI-SNIIRPGTLAVRLAANMIAGHLLL 172
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 938339404 173 T-LLGNTGPSLMIISVQFLLLAQLALLMLETAVAIIQSYVFTVLSTLY 219
Cdd:PRK13417 297 LaLMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 39-219 6.19e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 42.81  E-value: 6.19e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  39 PSRFNLIWSLITSTLFKEFKVLIgpKGHLGTTLIFIA-LFSLIMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFG 117
Cdd:PRK13420  45 PGRFQVALEGVVSTIEDAIKEVL--PRHARLVLPFVGtLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFG 122

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404 118 -----WINHTKHMFahlvpqgTPS-VLMPFMVcietISNIIRPGTLAVRLAANMIAGHLlltllgnTGPSLMIISVQFLL 191
Cdd:PRK13420 123 iraegLREYLKHYL-------SPSpFLLPFHL----ISEITRTLALAVRLFGNIMSLEL-------AALLVLLVAGFLVP 184

                        170       180
                 ....*....|....*....|....*...
gi 938339404 192 LAQLALLMLEtavAIIQSYVFTVLSTLY 219
Cdd:PRK13420 185 VPILMLHIIE---ALVQAYIFGMLALIY 209
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 79-168 1.50e-04

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 41.02  E-value: 1.50e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339404  79 LIMFNNLLGLFPYIFTSSSHMSMTFSLALPLWLSFMLFGWINHTKHMFAHLVPQGTPSVLMPFMVCIETISNIIRPGTLA 158
Cdd:MTH00050  32 IVLFLFLLYRLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLI 111

                         90
                 ....*....|
gi 938339404 159 VRLAANMIAG 168
Cdd:MTH00050 112 LRPFINISLG 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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