|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
6-577 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 646.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 6 LCICYISSFMLMGFSLMCVVIGSYYICFDKVTIIEWEIFSFVGTEVVGTLLFDWMSLYFLGLVSLISSLVILYSAGYMEN 85
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 86 EVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVALLMAITWMLN 165
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 166 YGSWNFVYYFDYCGSDYSMMVVMIMVLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLVS 245
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 246 GLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVK 325
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 326 DTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYTFRLTGYLM 405
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 406 GFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPLVIILPSWMKLLTLMVTLVGGWLSYLIMKFDLMEN 485
Cdd:MTH00165 401 SGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 486 --AFKGYKMKSFIGSMWFMPMISTKWISFMPLKLGLKYLQLVDLGWNEAIGSQGVYNQLTKQTSSLQSMSLyGNFKSYLL 563
Cdd:MTH00165 481 lkSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQN-NNLKIYLL 559
|
570
....*....|....
gi 938339407 564 LFFLWVLTMMLIIF 577
Cdd:MTH00165 560 SFLLWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
11-577 |
8.11e-169 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 491.28 E-value: 8.11e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 11 ISSFMLMGFSLMCVVIGSYYICFDKVTIIEWEIFSFVGTEVVGTLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLN 90
Cdd:MTH00151 6 LSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 91 RFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVALLMAITWMLNYGSWN 170
Cdd:MTH00151 86 RFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 171 FVYYFDYcgsdYSMMVVMIMVLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-NKLLLVSGLSK 249
Cdd:MTH00151 166 ILSMWDF----KLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFfPFLSSSSGFSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 250 FMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKDTQD 329
Cdd:MTH00151 242 FLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQD 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 330 IRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYTFRLTGYLMGFKY 409
Cdd:MTH00151 322 IRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSM 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 410 SFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPLVIILPSWMKLLTLMVTLVGGWLSylIMKFDLMENAFKG 489
Cdd:MTH00151 402 KSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLS--FGFWDSGFSSSKM 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 490 YKMKSFIGSMWFMPMISTKWISFMPLKLGLKYLQLVDLGWNEAIGSQGVYNQLTKQTSSLQSMSLygnfKSYLLLFFLWV 569
Cdd:MTH00151 480 VKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPV----KWFNFFIGLIL 555
|
....*...
gi 938339407 570 LTMMLIIF 577
Cdd:MTH00151 556 LLVLFLVV 563
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
14-575 |
3.86e-165 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 481.84 E-value: 3.86e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 14 FMLMGFSLMCVVIGSYYICFDKVTIIEWEIFSFVGTEVVGTLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFI 93
Cdd:MTH00209 7 FSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 94 MLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVALLMAITWMLNYGSWNFVY 173
Cdd:MTH00209 87 LLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWNIFY 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 174 YFDYCGSdysMMVVMIMVLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLVSGLSKF-ML 252
Cdd:MTH00209 167 LNFNSNL---GSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMsLL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 253 LIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKDTQDIRF 332
Cdd:MTH00209 244 LLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRM 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 333 LGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYTFRLTGYLMGFKYSFN 412
Cdd:MTH00209 324 VGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSK 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 413 SLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPLVIILPSWMKLLTLMVTLVGGWLSYLIMKFDLMenAFKGYKM 492
Cdd:MTH00209 404 SLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFF--LIKGYKV 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 493 KSFIGSMWFMPMISTKWISFMPLKLGLKYLQLVDLGWNEAIGSQGVYNQLTKQTSSLQSmSLYGNFKSYLLLFFLWVLTM 572
Cdd:MTH00209 482 NYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQI-IQNNSLKLFVTFMMLILLGV 560
|
...
gi 938339407 573 MLI 575
Cdd:MTH00209 561 ILF 563
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
11-575 |
9.93e-160 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 468.48 E-value: 9.93e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 11 ISSFMLMGFSLMCVVIGSYYICFDKVTIIEWEIFSFVGTEVVGTLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLN 90
Cdd:MTH00207 9 IASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 91 RFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVALLMAITWMLNYGSWN 170
Cdd:MTH00207 89 RFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWS 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 171 FVYYFDYCGSDYSMMVVMImvllAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLL-LVSGLSK 249
Cdd:MTH00207 169 ITNMWQTDMNNYIALSIMI----AAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLsSTYWFNP 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 250 FMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKDTQD 329
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQD 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 330 IRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYTFRLTGYLMGFKY 409
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPN 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 410 SFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPLVIILPSWMKLLTLMVTLVGGWLSYLIMKFDLMENAF-K 488
Cdd:MTH00207 405 SSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLlI 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 489 GYKMKSFIG-SMWFMPMISTKWISFMPLKLGLKYLQLVDLGWNEAIGSQGVYNQLTKQTSSLQSMSLYGnFKSYLLLFFL 567
Cdd:MTH00207 485 NNPLSHFAScLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNI-PNNYLMMSFV 563
|
....*...
gi 938339407 568 WVLTMMLI 575
Cdd:MTH00207 564 LLTIIIIM 571
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
10-576 |
1.49e-120 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 368.51 E-value: 1.49e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 10 YISSFMLMGFSLMCVVIGSYYICFDKVTIIEWEIFSFVGTEVVGTLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNL 89
Cdd:MTH00211 30 HIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNI 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 90 NRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTAL-SNRIGDVALLMAITWML-NYG 167
Cdd:MTH00211 110 NRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlNLN 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 168 SWNFVYYFdycGSDYSMMVVMIMVLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLVSGL 247
Cdd:MTH00211 190 SWEISQLF---ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQL 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 248 S-KFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKD 326
Cdd:MTH00211 267 IlGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNN 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 327 TQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYTFRLTGYLMG 406
Cdd:MTH00211 347 EQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLG 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 407 FKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPS-PLVIILPSWMKLLTLMVTLVGGWLSYLIMKFdlmEN 485
Cdd:MTH00211 427 GYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEkPEILSLPFLLKLMPLLVTIVGLLLGLELVNL---TH 503
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 486 AFKGYKMKSFIGSMWFMPMISTKWISFMPLKLGLKY-LQLVDLGWNEAIGSQGVYNQLTKQTSSLQSMSlYGNFKSYLLL 564
Cdd:MTH00211 504 KQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLsTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQ-QGLIKSYLAL 582
|
570
....*....|..
gi 938339407 565 FFLWVLTMMLII 576
Cdd:MTH00211 583 LLLSLLLILLLF 594
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
54-477 |
8.51e-110 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 341.36 E-value: 8.51e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 54 TLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYY 133
Cdd:COG1009 75 GFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 134 QNVKSYNAGMLTA-LSNRIGDVALLMAITWMLNY-GSWNFVYYFDYCGSDYS---MMVVMIMVLLAGMTKSAQIPFSSWL 208
Cdd:COG1009 155 YEKPSARRAARKAfLVTRVGDLGLLLGILLLGAIaGTLNFSELLAAAPTILSsplLTLILLLLLLGAFGKSAQFPLHFWL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 209 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLL-LVSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLM 287
Cdd:COG1009 235 PDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFaLSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYM 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 288 MGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVkDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKD 367
Cdd:COG1009 315 FLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKE 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 368 LILES-LSMGVVNKFIYLIFFIATGLTMMYTFRLtgYLMGF--KYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSW 444
Cdd:COG1009 394 AILEAaLEAGGLGPLLLAVALLGAFLTAFYSFRL--FFLVFfgKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPG 471
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 938339407 445 L---------IFPSPLVIILPSWMKLLTLMVTLVGGWLSYLI 477
Cdd:COG1009 472 LlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
37-579 |
1.18e-95 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 304.39 E-value: 1.18e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 37 TIIEWEIFSFVGTEVVGTLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMIL 116
Cdd:MTH00004 62 ITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 117 LGWDGLGLVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVALLMAITWM-LNYGSWNFVYYFDYCGSDysmMVVMIMVLLA 194
Cdd:MTH00004 142 IGWEGVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWEIQQLFSPTQTP---TLPLLGLILA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 195 GMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLVSGLSKFM-LLIGSLTMLMAGLGAMQEFDLK 273
Cdd:MTH00004 219 ATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTIcLCLGALTTLFAATCALTQNDIK 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 274 SIIALSTLSQLGLMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLS 353
Cdd:MTH00004 299 KIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLA 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 354 LCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYTFRLTGY-LMGFkYSFNSLSSLHDSNSSMVVGIILLL 432
Cdd:MTH00004 379 LMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLvQTGF-PRTPPTTPINENTPTIINPITRLA 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 433 VVAVVGGCSLSWLIFPS-PLVIILPSWMKLLTLMVTLVGGWLSYLIMKFDLMENAFKGYKMKSFIGSMWFMPMISTKWIS 511
Cdd:MTH00004 458 LGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHNFSNQLAFFNPLTHRLLP 537
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 938339407 512 FMPLKLGLKY-LQLVDLGWNEAIGSQGVYN---QLTKQTSSLQSmslyGNFKSYLLLFflwVLTMMLIIFTL 579
Cdd:MTH00004 538 MTLLKSSQKIaTHLIDLSWLEKMGPKGLANlqlTASKTLTTLQK----GLIKNYLTSF---ALTILLLLLLT 602
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
10-579 |
1.92e-95 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 304.59 E-value: 1.92e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 10 YISSFMLMGFSLMCVVIGSYYICFD----KVTIIEWeiFSFVGTEVVGTLLFDWMSLYFLGLVSLISSLVILYSAGYMEN 85
Cdd:MTH00208 56 NFSISLLKTLAFLSLINLLIWILLGcpniNISLSNW--LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSN 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 86 EVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVALL--MAITw 162
Cdd:MTH00208 134 DPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIIlfLSLS- 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 163 MLNYGSWNFVYYFDYCGSDYSMMVVMIM-VLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKL 241
Cdd:MTH00208 213 LINFNSWNLNEILSLNNSNSFLINILLFgILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPL 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 242 L-LVSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSI 320
Cdd:MTH00208 293 IsNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSI 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 321 IHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYTFRL 400
Cdd:MTH00208 373 IHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRI 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 401 TGYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPlVIILPSWMKLLTLMVTLVGGWLSYLIMKF 480
Cdd:MTH00208 453 IFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSFSFLLS 531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 481 dLMENAFKgYKMKSFIGSMWFMPMISTKWISFMPLKLGLKY-LQLVDLGWNEAIGSQGVYNQLTKQTSSLQSmSLYGNFK 559
Cdd:MTH00208 532 -LSSNPIN-SNFFSFLSNQWFFVNISHSIIISFSFFTSLFGsTRTLDRGWSENIGPQGIGNTSSTLSKSYQL-TQTGYIK 608
|
570 580
....*....|....*....|
gi 938339407 560 SYLLLFFLWVLTMMLIIFTL 579
Cdd:MTH00208 609 QYLLSSTLLFLLILTLSLII 628
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
37-576 |
3.86e-94 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 300.29 E-value: 3.86e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 37 TIIEWEIFSFVGTEVVGTLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMIL 116
Cdd:MTH00066 60 ITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 117 LGWDGLGLVSYCLV-IYYQNVKSYNAGMLTALSNRIGDVALLMAITW-MLNYGSWNFVYYFDYCGSDysmMVVMIMVLLA 194
Cdd:MTH00066 140 IGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWELQQIFLLNDNS---TLPLLGLILA 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 195 GMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLVSGLSKFM-LLIGSLTMLMAGLGAMQEFDLK 273
Cdd:MTH00066 217 AAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTIcLCLGALTTLFTAACALTQNDIK 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 274 SIIALSTLSQLGLMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLS 353
Cdd:MTH00066 297 KIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLA 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 354 LCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYTFRLTGY-LMGFKySFNSLSSLHDSNSSMVVGIILLL 432
Cdd:MTH00066 377 LTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFsSMKFP-RSLPLSPINENNPLIINPIKRLA 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 433 VVAVVGGCSLSWLIFPS-PLVIILPSWMKLLTLMVTLVGGWLSYLIMKfdLMENAFKGYKMKSFIGSMWFMPMISTKWIS 511
Cdd:MTH00066 456 WGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAK--ITSKTTPKTKMHSFSNLLAFFPTIIHRLSP 533
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 938339407 512 FMPLKLGLKYL-QLVDLGWNEAIGSQGVYNQ---LTKQTSSLQSmslyGNFKSYLLLFFLWVLTMMLII 576
Cdd:MTH00066 534 KTNLNSGQNIAtHLTDMTWYEKSGPKGLTNQqlpPIKTITNIQT----GLIKTYLTLFLITLLLMLILL 598
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
54-477 |
1.69e-92 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 296.68 E-value: 1.69e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 54 TLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYY 133
Cdd:PRK06590 79 GLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFW 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 134 QNVKSYNAGMLTA-LSNRIGDVALLMAITWMLNY-GSWNFVYYFDYC----GSDYSMMVVM-IMVLLAGMTKSAQIPFSS 206
Cdd:PRK06590 159 YKKPSAGAAAMKAfIVNRVGDVGLALGIFLLFAEfGSLNYDEVFAAApqffGLGWSALTLIcLLLFIGAMGKSAQFPLHT 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 207 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKL-LLVSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLG 285
Cdd:PRK06590 239 WLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLfELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLG 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 286 LMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYS 365
Cdd:PRK06590 319 YMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFS 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 366 KDLILES-LSMGVVNKFIYLIffIATGLTMMYTFRLtgYLMGF-----KYSFNSlsslHDSNSSMVVGIILLLVVAVVGG 439
Cdd:PRK06590 399 KDEILEAaFANGHINLFVAGL--VGAFLTAFYSFRL--IFLVFhgkekEKIHHP----HESPAVMTLPLIVLAVLSVFAG 470
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 938339407 440 -----CSLSWLIFPSPLVII-----LPSWMKLLTLMVTLVGGWLSYLI 477
Cdd:PRK06590 471 alivpPFLGVLPLTTELAHGeaehhLPVWVALLPLVVALAGIALAWLL 518
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
35-477 |
4.46e-92 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 294.96 E-value: 4.46e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 35 KVTIIEWEIFSFVGTEVVGTLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIM 114
Cdd:TIGR01974 59 AFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQ 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 115 ILLGWDGLGLVSYCLV-IYYQNVKSYNAGMLTALSNRIGDVALLMAITWMLNY-GSWNFVYYFDYC-GSDYSMMVVM-IM 190
Cdd:TIGR01974 139 LFFGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYfGTLNFQEVFALApGAFFSALTLIcLL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 191 VLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKL-LLVSGLSKFMLLIGSLTMLMAGLGAMQE 269
Cdd:TIGR01974 219 LFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLfELSPTALYLVTIIGAITALFAATVALVQ 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 270 FDLKSIIALSTLSQLGLMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNV 349
Cdd:TIGR01974 299 NDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLI 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 350 ANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYTFRLtgYLMGF--KYSFNSLSSLHDSNSSMVVG 427
Cdd:TIGR01974 379 GSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRL--IFMVFhgKERHEADAHPHESPLVMLLP 456
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 938339407 428 IILLLVVAVVGGCSLSWLIFPSPLVII-----------LPSWMKLLTLMVTLVGGWLSYLI 477
Cdd:TIGR01974 457 LIVLAVGSVFAGFFIVPLFEFLKGVLPtsaepalehhhVPALEIWSPTAVAILGILLAYLL 517
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
78-576 |
1.02e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 275.58 E-value: 1.02e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 78 YSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVAL 156
Cdd:MTH00108 103 FSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGF 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 157 LMAITW-MLNYGSWNFVYYFdYCGSDYSMMVVMIMvLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLL 235
Cdd:MTH00108 183 ILAMAWfLLNLNSWDLQQIF-MLNPNNSNLPLMGL-LLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLL 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 236 IRF------NKLLLVsglskFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLGGWMLAFFHLLTHALF 309
Cdd:MTH00108 261 IRFhplmenNKTIQT-----LTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFF 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 310 KALLFMCAGSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIA 389
Cdd:MTH00108 336 KAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIA 415
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 390 TGLTMMYTFRLTGYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPLVII-LPSWMKLLTLMVTL 468
Cdd:MTH00108 416 TSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQMtMPLYLKLTALAVTI 495
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 469 VGgwlSYLIMKFDLMENAFKGYK---MKSFIGSMWFMPMISTKWISFMPLKLGLKY-LQLVDLGWNEAIGSQGVYNQLTK 544
Cdd:MTH00108 496 LG---FILALELNLLTNNLKFKYpsnTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLaSMLLDLIWLEKILPKTISLIQMK 572
|
490 500 510
....*....|....*....|....*....|..
gi 938339407 545 QTSSLQSMSlyGNFKSYLLLFFLWVLTMMLII 576
Cdd:MTH00108 573 ASTTISNQK--GLIKLYFLSFLITLTLSLLLF 602
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
82-579 |
1.76e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 269.78 E-value: 1.76e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 82 YMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVALLMAI 160
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAvIYNRVGDIGLILAM 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 161 TWML-NYGSWNFVYYFdYCGSDYSMMVVMIMVLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 239
Cdd:MTH00137 191 AWMAtNLNSWEIQQIF-ALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLS 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 240 KLLLVSGLS-KFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLGGWMLAFFHLLTHALFKALLFMCAG 318
Cdd:MTH00137 270 PLMENNQTAlTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSG 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 319 SIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYTF 398
Cdd:MTH00137 350 SIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSL 429
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 399 RLTGY-LMGFKySFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPL-VIILPSWMKLLTLMVTLVGgwlsyL 476
Cdd:MTH00137 430 RVVFFvSMGHP-RFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTpVMTMPPLLKLAALIVTILG-----L 503
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 477 IMKFDLMENAFKGYKMKS------FIGSMWFMPMISTKWISFMPLKLGLKYL-QLVDLGWNEAIGSQGVYN---QLTKQT 546
Cdd:MTH00137 504 LIALELASLTNKQFKPTPtlpphhFSNMLGFFPAIIHRLTPKLNLTLGQTIAtQMVDQTWLEKTGPKGIASlqlPLITTT 583
|
490 500 510
....*....|....*....|....*....|...
gi 938339407 547 SSLQSmslyGNFKSYLLLFFLwVLTMMLIIFTL 579
Cdd:MTH00137 584 SNIQQ----GMIKTYLTLFLL-TLALATLLLLL 611
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
55-576 |
4.38e-76 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 253.08 E-value: 4.38e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 55 LLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLV-IYY 133
Cdd:MTH00020 76 LQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 134 QNVKSYNAGMLTALSNRIGDVALLMAITWMLN-YGSWNFVYYFDYCGSDYSMMVVMIMVLL--AGMTKSAQIPFSSWLPA 210
Cdd:MTH00020 156 TRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFSSVFNMVVSAPSSDITLICLFLfiGAVGKSAQLGLHTWLPD 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 211 AMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLVSGLSKFML-LIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMG 289
Cdd:MTH00020 236 AMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 290 ILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLI 369
Cdd:MTH00020 316 ACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLI 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 370 LESLSMGVVNKFIYLIFFIATGLTMMYTFRLT--GYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLI- 446
Cdd:MTH00020 396 LELAFGQYYLIFAYWLGCFSALLTAFYSIRLIylTFLSNTNLKKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIw 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 447 -FPSPLVIILPSWMKLLTLMVTLVGGWLSYLIM----KFDLMENAFKGYKMKSFIGSMWFMPMISTKWISFMPLKLGLKY 521
Cdd:MTH00020 476 sFQITLPPIVPLSIKLLPVFLSLGGIGLVIILYfyssKTFRVPFSFIGRNSYTFLGSAWQFNYILNYFLIKKIWKGGHLI 555
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 938339407 522 -LQLVDLGWNEAIGSQGVYN---QLTKQTSSLQSMSLYgnfkSYLLLFFLWVLTMMLII 576
Cdd:MTH00020 556 sYRTIDKGVLELVGPKGISNfliILTQGLSSLQSGLVF----NYALVILIGVAIFIWGL 610
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
55-569 |
5.11e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 242.22 E-value: 5.11e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 55 LLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLV-IYY 133
Cdd:MTH00210 76 LQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 134 QNVKSYNAGMLTALSNRIGDVALLMAITWMLN-YGSWNFVYYFDYCGS---DYSMMVVMIMVLLAGMTKSAQIPFSSWLP 209
Cdd:MTH00210 156 TRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVTninKESLTIICLLLFIGAVGKSAQLGLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 210 AAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLVSGLS-KFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMM 288
Cdd:MTH00210 236 DAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLAlTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 289 GILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDL 368
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 369 ILESLSMGVVNKFIYLIFFIATGLTMMYTFRLT--GYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLI 446
Cdd:MTH00210 396 ILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIylTFITNTNSKKEVFIGVHESSWNITFPLLLLAFGSIFVGYLGKEVV 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 447 FPSPLVIILPSWMKLLTLMVTLVGGWLSYLI--------MKFDLMENAFKGYKMKSFIGSMWFMPMISTKWISFMPLKLG 518
Cdd:MTH00210 476 LSNVIPPIVPNSIKMIPLLFSLLGALLAFVIynsmvfliKISRRGVSIRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFG 555
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 938339407 519 -LKYLQLVDLGWNEAIGSQGVYN---QLTKQTSSLQSmslyGNFKSYLLLFFLWV 569
Cdd:MTH00210 556 hLITYRIIDRGLLEIIGPRGISKvliKLTQKISNLQS----GMVFNYALIMIIFT 606
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
14-416 |
1.18e-68 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 230.96 E-value: 1.18e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 14 FMLMGFSLMCVVIGSYYICFDKVTIIEWEIFSFvgtevvgTLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFI 93
Cdd:MTH00095 7 LILFFFFFLLLFILFLPFMKLNLFFLEWDFLSL-------KFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFY 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 94 MLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVALLMAITWMLNYGSWNFVY 173
Cdd:MTH00095 80 FVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYYFFSF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 174 YFdycgsdySMMVVMIMVLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLVSGLSKFMLL 253
Cdd:MTH00095 160 SF-------FSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 254 IGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKDTQDIRFL 333
Cdd:MTH00095 233 IGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNY 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 334 GSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYTFRL-TGYLMGFKYSFN 412
Cdd:MTH00095 313 SNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLwKSFFLSFSKVVN 392
|
....
gi 938339407 413 SLSS 416
Cdd:MTH00095 393 VYSS 396
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
58-411 |
6.17e-59 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 208.34 E-value: 6.17e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 58 DWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLV-IYYQNV 136
Cdd:PRK07376 90 DPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVgFWYDRK 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 137 KSYNAGMLTALSNRIGDVALLMAIT---WMLnyGSWNFvyyfDYCGSDYSMMV------------VMIMVLLAGMTKSAQ 201
Cdd:PRK07376 170 GAADAAQKAFVVNRVGDFGLLLGILglfWAT--GSFDF----DGIADRLSELVssgavsgwlallLCILVFLGPMAKSAQ 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 202 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLlvSGLSKFMLLI---GSLTMLMAGLGAMQEFDLKSIIAL 278
Cdd:PRK07376 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVF--EQFPAVMTVIawtGAITAFLGASIALTQNDIKKGLAY 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 279 STLSQLGLMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKDT--------QDIRFLGSMVQGMPFTCVAMNVA 350
Cdd:PRK07376 322 STISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVvghdpvlaQDMRLMGGLRKYMPITAITFLIG 401
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 938339407 351 NLSLCGVPFLSGFYSKDLILESLSMGvvNKFIYLIFFIATGLTMMYTFRLtgYLMGFKYSF 411
Cdd:PRK07376 402 CLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRM--YFLTFEGEF 458
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
11-371 |
5.15e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 202.88 E-value: 5.15e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 11 ISSFMLMGFSLMCVVIGSYYICFDKvTIIEWEIFSFVGTEVVGT---LLFDWMSLYFLGLVSLISSLVILYSAGYMENEV 87
Cdd:MTH00032 30 ILSTICMGSSTLIALFLAYEVLIND-AVVHIELYKWIESEIFIThigLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDP 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 88 NLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQN-VKSYNAGMLTALSNRIGDVALLMAITWML-N 165
Cdd:MTH00032 109 HVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIYkT 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 166 YGSWNFVYY---------FD---YCGSDYS-----MMVVMIMVLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLV 228
Cdd:MTH00032 189 IGSLDFLTFnggsvgsgiMDrgyYGGGAYEsplapFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMV 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 229 TAGVYLLIRFNKLLLVSGLSKFMLLI-GSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSL-GGWMLAFFHLLTH 306
Cdd:MTH00032 269 TAGVFLMIRSFPLFEKAPLTLLIITIfGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNH 348
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 938339407 307 ALFKALLFMCAGSIIHSVK-DTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILE 371
Cdd:MTH00032 349 AFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
54-400 |
1.07e-52 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 185.74 E-value: 1.07e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 54 TLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYY 133
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 134 QNVKSYNAGMLTALSNRIGDVALLMAITWM-LNYGSWNFVYYFDYCG--SDYSMMVVMIMVLLAGMTKSAQIPFSSWLPA 210
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAelDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 211 AMA-APTPVSALVhSSTLVTAGVYLLIRFNKLLL----VSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLG 285
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLFgadpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 286 LMM---GILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKdTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSG 362
Cdd:COG0651 310 YILlglGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350
....*....|....*....|....*....|....*...
gi 938339407 363 FYSKDLILESLsMGVVNKFIYLIFFIATGLTMMYTFRL 400
Cdd:COG0651 389 FVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
109-373 |
1.40e-52 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 181.36 E-value: 1.40e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 109 SPNLIMILLGWDGLGLVSYCLVIYY-QNVKSYNAGMLTALSNRIGDVALLMAITWMLNYGSW----NFVYYFDYCGSDYS 183
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTlsfdELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 184 MMVVMIMVLLAGMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFNKLLLVSG--LSKFMLLIGSLTML 260
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSpfIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 261 MAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLG---GWMLAFFHLLTHALFKALLFMCAGSIIHSVKDTQDIRFLGSMV 337
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270
....*....|....*....|....*....|....*.
gi 938339407 338 QGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESL 373
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAA 275
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
58-451 |
7.73e-51 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 188.33 E-value: 7.73e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 58 DWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIyyQNVK 137
Cdd:PRK12650 78 DALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA--RSGS 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 138 SYNAG-MLTALSNRIGDVALLMAITWMLNY-GSWNF--VYYFDYCGSDYSMM-VVMIMVLLAGMTKSAQIPFSSWLPAAM 212
Cdd:PRK12650 156 GGEAGsIRTLILTFFGGLTLLAAVAIAATQtGTTSLsgILHSDVWAEKPGLTtVVAVLIAVAAFTKSAQFPFHFWLPEAM 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 213 AAPTPVSALVHSSTLVTAGVYLLIRFNKLLL-VSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGIL 291
Cdd:PRK12650 236 AAITPVSAFLHAAAVVKAGIYLLLRFSPVFHdVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATI 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 292 SLG---GWMLAFFHLLTHALFKALLFMCAGSIIHSVkDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDL 368
Cdd:PRK12650 316 GVGtpfALTAAVVHTLAHALFKSSLFMLIGVVDHQA-GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEG 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 369 ILESLSMGVVNKFIYLIFFIATGLTMMYTFRLTGYLM--GFKYSFNSLSSLHDSNSSmvvgiiLLLVVAVVGGCSLSWLI 446
Cdd:PRK12650 395 MLTAFLEAPGGNAGVVLLLVGAALGAVFTFAYSARLVlgAFVDGPRDMSHVKEAPVS------LWLPAALPGALSLPLGL 468
|
....*
gi 938339407 447 FPSPL 451
Cdd:PRK12650 469 VPGLL 473
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
56-439 |
2.95e-50 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 185.12 E-value: 2.95e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 56 LFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIY-YQ 134
Cdd:PRK12647 61 LLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFnHE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 135 NVKSYNAGMLTALSNRIGDVALLMAITWMLNYGswnfvyyfdycGS-DYSMMVVM--------------IMVLLAGMTKS 199
Cdd:PRK12647 141 REAARRAALQALLVTGGGGLALLAGLILLGNVT-----------GTySLSELLASgdvirehplylailLLVLGGAFTKS 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 200 AQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLlvSGLSKFM---LLIGSLTMLMAGLGAMQEFDLKSII 276
Cdd:PRK12647 210 AQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVL--GGTPLWQtilPLFGGLTMLTGALLAVRQTDLKLIL 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 277 ALSTLSQLGLMMGILSLG---GWMLAFFHLLTHALFKALLFMCAGSIIHSVkDTQDIRFLGSMVQGMPFTCVAMNVANLS 353
Cdd:PRK12647 288 AYSTVSALGTLVMLLGLGselAIKAAVLFLVAHSLYKGALFMVAGIIDHET-GTRDITKLGGLRRAMPITAAAALLAALS 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 354 LCGVPFLSGFYSKDLILESLS-MGVVNKFIYLIFFIATGLTMMYTFrltgyLMGFKYSFNSLSSL----HDSNSSMVVGI 428
Cdd:PRK12647 367 MAGLPPLFGFLAKELIYEALLeAPLWSLILTVAAVLGNALMVAVAF-----LVGIKPFLGKLVETpkhpHEAPVLMWLGP 441
|
410
....*....|.
gi 938339407 429 ILLLVVAVVGG 439
Cdd:PRK12647 442 AVLAVLGLLFG 452
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
55-400 |
7.20e-50 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 184.57 E-value: 7.20e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 55 LLFDWMSLYFLGLVSLISSLVILYSAGYMENEV-NLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIY- 132
Cdd:PRK12646 74 LRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYw 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 133 YQNVKSYNAGMLTALSNRIGDVALLMAITWMLNYGSWN----FVYYFDYCGSDYSMMVVMIMVLLAGMTKSAQIPFSSWL 208
Cdd:PRK12646 154 YNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNniteILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 209 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLlvsGLSKFMLLI----GSLTMLMAGLGAMQEFDLKSIIALSTLSQL 284
Cdd:PRK12646 234 PRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLL---GLSNMYIYIvtfvGLITMLFGSITALKQWDLKGILAYSTISQL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 285 GLMMGILSLGGWML-----------------AFFHLLTHALFKALLFMCAGSIIHSVkDTQDIRFLGSMVQGMPFTCVAM 347
Cdd:PRK12646 311 GMIMAMVGIGGGYAqhqqdaiasiyvfvlfaALFHLMNHAIFKCALFMGVGIIDHEA-GTRDIRILSGMRQLFPKMNLVM 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 938339407 348 NVANLSLCGVPFLSGFYSKDLILESLSMG--------VVNKFIYLIFFIATGLTMMYTFRL 400
Cdd:PRK12646 390 TIAALSMAGVPFLNGFLSKEMFLDALTQTgqlsqfslISMIIIVFIGVIASIFTFTYALYM 450
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
8-477 |
1.95e-49 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 179.30 E-value: 1.95e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 8 ICYISSFMLMGFSLMCVVIGSYYICFDkvtiieweIFSFVGTEVVGTLLFDWMSLYFLGLVSLISSLVILYSAGYMENEV 87
Cdd:MTH00063 2 VLLVSLLLCLLIFFLFLVGVSSSVSLN--------FLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSY 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 88 NLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVALLMAITWmlnyg 167
Cdd:MTH00063 74 ASFLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL----- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 168 swnfvyyfdYCGSDYSMMVVMIMVLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLVSGL 247
Cdd:MTH00063 149 ---------SCWGGSGSFLCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWL 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 248 SKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKDT 327
Cdd:MTH00063 220 SIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGS 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 328 QDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYTFRLTGYLMGF 407
Cdd:MTH00063 300 QSSNCVYSSILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILFGV 379
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 408 KySFNSLSSLHDSNSSMVVGIILLLVVavvggcslSWLIFPSPLVIILPSWMKLLTLMVTLVGGWLSYLI 477
Cdd:MTH00063 380 K-SSLSSGVRFLFFNSGLMVFLWLFIN--------YYVFLLLDEVVYLGVFISLVLLLVQLLGLLVGVLF 440
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-401 |
1.79e-48 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 181.54 E-value: 1.79e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 54 TLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYY 133
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 134 QNVKSYNAGMLTALS-NRIGDVALLMAitwMLNYGswnfvyyfDYCGSdYSMMVVM----------------IMVLLAGM 196
Cdd:PRK12648 151 HHRADARRGARMALTvTGAGGLALLAG---VLLLG--------HIVGS-YDLDVVLaagdlirahplyppalVLILLGAF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 197 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLL--------LVSGlskfmllIGSLTMLMAGLGAMQ 268
Cdd:PRK12648 219 TKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLagteewfwIVGG-------AGLITLLLGAYFALF 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 269 EFDLKSIIALSTLSQLGLMMGILSLG---GWMLAFFHLLTHALFKALLFMCAGSIIHSVkDTQDIRFLGSMVQGMPFTCV 345
Cdd:PRK12648 292 QHDLKGLLAYSTISHLGLITLLLGLGsplAAVAAIFHIINHATFKASLFMAAGIIDHET-GTRDMRRLSGLRRLMPITAT 370
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 346 AMNVANLSLCGVPFLSGFYSKDL----ILESLSMGVVNKFIYLIFFIATGLTMMYTFRLT 401
Cdd:PRK12648 371 LAMVAAAAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFI 430
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
54-371 |
3.15e-48 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 179.66 E-value: 3.15e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 54 TLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYY 133
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 134 -QNVKSYNAGMLTALSNRIGDVALLMAITWM-LNYGSWNFVYYF---DYCGSDYSMMVVMIMVLLAGMTKSAQIPFSSWL 208
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLgKITGSFSIDAVIasaDAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 209 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLVS-GLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLM 287
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTeAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 288 MGILSLGGWML----------------AFFHLLTHALFKALLFMCAGSIIHSvKDTQDIRFLGSMVQGMPFTCVAMNVAN 351
Cdd:TIGR00940 310 MVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340
....*....|....*....|
gi 938339407 352 LSLCGVPFLSGFYSKDLILE 371
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFA 408
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-399 |
5.79e-48 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 180.12 E-value: 5.79e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 54 TLLFDWMSLYFLGLVSLISSLVILYSAGYM-ENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIY 132
Cdd:PRK12644 69 AFRLDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGH 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 133 YQNVKS-----YNAGMLTALsnriGDVALLMAITWMLN-YGSWNFVYYFDYCGSDYSMMVVMIMVLLAGMTKSAQIPFSS 206
Cdd:PRK12644 149 YAERAAsrraaLQALLVTTA----GGLAMLVGIIILGQaAGTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPFHF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 207 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLVSGLSKFMLLI-GSLTMLMAGLGAMQEFDLKSIIALSTLSQLG 285
Cdd:PRK12644 225 WLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVlGLATMLLGGWRALRQHDLKLILAYGTVSQLG 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 286 LMMGILSLGG--WMLAFFHLLT-HALFKALLFMCAGSIIHSVkDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSG 362
Cdd:PRK12644 305 FLTVLVGIGTrdAALAGLAMLLaHALFKAALFLVVGIIDHST-GTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLG 383
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 938339407 363 FYSKDLILESL----SMGVVNKFIYLIFFIATGLTMMYTFR 399
Cdd:PRK12644 384 FVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
54-439 |
6.20e-46 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 173.19 E-value: 6.20e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 54 TLLFDWMSLYFLGLVSLISSLVILYSAGYMENEV-NLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIY 132
Cdd:PRK12645 73 TLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 133 -YQNVKSYNAGMLTALSNRIGDVALLMAITWM-LNYGSWNFVYYFDYCG---SDYSMMVVMIMVLLAGMTKSAQIPFSSW 207
Cdd:PRK12645 153 wYEREASRYGAQKSMLITVFGGLSMLGGFILLyIMTGSFSIREMIANADeiqNSPLFIPAMILILLGAFTKSAQFPFYIW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 208 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLVSGLSKFML-LIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGL 286
Cdd:PRK12645 233 LPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVtLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 287 MMGILSLGG------------WMLAF----FHLLTHALFKALLFMCAGSIIHSVkDTQDIRFLGSMVQGMPFTCVAMNVA 350
Cdd:PRK12645 313 IMSLLGIGAaslhyqgddskiYAAAItaaiFHLINHATFKGSLFMIVGIVDHET-GTRDIRKLGGLMTIMPITFTIALIG 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 351 NLSLCGVPFLSGFYSKDLILESL---------SMGVVNKFIYLIFFIATGLTMMYTFRLTGYLMGFKYSFNSLS-SLHDS 420
Cdd:PRK12645 392 ALSMAGLPPFNGFLSKEMFFESMlnateanlfSLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFGKYKPEQLPkKAHEA 471
|
410
....*....|....*....
gi 938339407 421 NSSMVVGIILLLVVAVVGG 439
Cdd:PRK12645 472 PIGMLISPIILASLVVVFG 490
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
67-412 |
1.13e-43 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 166.22 E-value: 1.13e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 67 LVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLV-IYYQNVKSYNAGMLT 145
Cdd:CHL00025 99 LITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKA 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 146 ALSNRIGDVALLMAIT---WMLnyGSWNFVYYFD------YCGSDYSMMVVMIMVLL-AG-MTKSAQIPFSSWLPAAMAA 214
Cdd:CHL00025 179 FVTNRVGDFGLLLGILgfyWIT--GSFEFRDLFEifnnliYNNEVNLLFATLCAFLLfLGpVAKSAQFPLHVWLPDAMEG 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 215 PTPVSALVHSSTLVTAGVYLLIRFNKLLLVSGLS-KFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSL 293
Cdd:CHL00025 257 PTPISALIHAATMVAAGIFLVARLLPLFIVIPYImNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGI 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 294 GGWMLAFFHLLTHALFKALLFMCAGSIIHSV--------KDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYS 365
Cdd:CHL00025 337 GSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWS 416
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 938339407 366 KDLILeslsmgvVNKFIY-----LIFFIATGLTMMYTFRLtgYLMGFKYSFN 412
Cdd:CHL00025 417 KDEIL-------NDSWLYspifaIIAWSTAGLTAFYMFRI--YLLTFEGHLR 459
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
14-370 |
1.26e-43 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 162.07 E-value: 1.26e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 14 FMLMGFSLMCVVIGSYYICFDKVTIIEWEIFSFVGTEVVGtLLFDWMSLYFLGLVSLISSLVILYSAGYMENE------- 86
Cdd:PRK06525 31 VLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGDVALFG-LVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPGnrehpvh 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 87 VNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVALLMAITWM-LN 165
Cdd:PRK06525 110 EGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLfLQ 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 166 YGSWNFVYYFDYcgSDYSMMVVMIMVLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF----NKL 241
Cdd:PRK06525 190 TGTFALSALSGL--HGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAiqsmGPI 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 242 LLVSGLskFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLG------GWMLAFFHLLTHALFKALLFM 315
Cdd:PRK06525 268 PHVIGY--VGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgsrlALEGSIAYIFNHAFAKSLFFL 345
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 938339407 316 CAGSIIHSVkDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLIL 370
Cdd:PRK06525 346 VAGALSYSC-GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
58-439 |
8.83e-41 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 158.07 E-value: 8.83e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 58 DWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVK 137
Cdd:PRK12649 79 DGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRP 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 138 SYNAGMLTALSNRIGDVALLMAITWMLnyGSWNFVYYFDYCGSDYSM----------MVVMIMVLLAGMTKSAQIPFSSW 207
Cdd:PRK12649 159 ESVYGATKSLLITAGGGLFMFAGFLLL--HVITGTYDIATILQDSELienikghplfLITLILIFIGAAAKSAQGPFYIW 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 208 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLlvSGLSKFMLLI---GSLTMLMAGLGAMQEFDLKSIIALSTLSQL 284
Cdd:PRK12649 237 LPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIF--SGTEAWFILVsgtGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 285 GLMMGILSLG-------GWMLAFFHLLTHALFKALLFMCAGSIIHSVKdTQDIRFLGSMVQGMPFTCVAMNVANLSLCGV 357
Cdd:PRK12649 315 AYLMTMYGYTtyhepglGVAAATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAMAGI 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 358 PFLSGFYSKDLILE-SLSMGVVNKFIYLIFFIATG-----LTMMYTFRLT-GYLMGFKYSFNSLSSLHDSNSSMVVGIIL 430
Cdd:PRK12649 394 PPLNGFLSKEMFYEtSVEMGALIGGPFTIIIPAVAvlggvFTFAYSIKLIdGIFLGERTHDHLPHHIHEAPYVMLIPAAF 473
|
....*....
gi 938339407 431 LLVVAVVGG 439
Cdd:PRK12649 474 LAGLVILFG 482
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-452 |
2.06e-36 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 141.94 E-value: 2.06e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 58 DWMSLYFLGLVSLISSLVILYSAGYmeNEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVK 137
Cdd:PRK08375 76 DSLSALFLLVTSILAIAALLYAIGY--GEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 138 SYNAGMLTALSNRIGDVALLMAI--TWMLNyGSWNFVYYFDYCGSDYSMMVVMIMVLLAGMTKSAQIPFSSWLPAAMAAP 215
Cdd:PRK08375 154 ALAAARKYLIVGLIGSTFLLIGVglLYGVT-GTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 216 TPVSALVHSSTLVTAGVYLLIRFnkLLLVSGLSKFMLL--------IGSLTMLMAGLGAMQEFDLKSIIALSTLSQLG-- 285
Cdd:PRK08375 233 PPVVTALLSGLVTKVAVYALIRI--YFTVFGGDFRFALglgwllavLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGyi 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 286 -LMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKdTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFY 364
Cdd:PRK08375 311 lLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFV 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 365 SKDLILESlSMGVVNKFIYLIFFIATGLTMMYTFRLTGYLmgfkysFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSW 444
Cdd:PRK08375 390 SKWYLVVG-AVEAGQWLVLAVLLASSLLALLYFLRIWYRA------FFGPPPPGSEAPKQEAPLGMLAPSLALALLSLLL 462
|
....*...
gi 938339407 445 LIFPSPLV 452
Cdd:PRK08375 463 GIYAGPLL 470
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
396-576 |
7.25e-34 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 126.90 E-value: 7.25e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 396 YTFRLTGYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPLVIILPSWMKLLTLMVTLVGGWLSY 475
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 476 LIMKFDL-MENAFKGYKMKSFIGSMWFMPMISTKWISFMPLKLGLKYLQLVDLGWNEAIGSQGVYNQLTKQTSSLQSMSl 554
Cdd:pfam06455 81 ELSNLSNkQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ- 159
|
170 180
....*....|....*....|..
gi 938339407 555 YGNFKSYLLLFFLWVLTMMLII 576
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
12-404 |
1.69e-33 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 135.63 E-value: 1.69e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 12 SSFMLMGFSLMCVVIGSYYICFDK-VTIIEWEIFSFVGTevvgTLLFDWMSLYFLGLVSLISSLVILYSAGY---MENEV 87
Cdd:PRK08667 33 SVLWLVIAIALLLFAGSLQLFTGNpLDIPLWGIAPGLDI----TFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 88 NLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIY-YQNVKSYNAGMLTALSNRIGDVAL-LMAITWMLN 165
Cdd:PRK08667 109 RANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNdYQEEETQRAGIFYFVMTQLSTVFLmLGIIVLFIQ 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 166 YGSWNFVYYfdyCGSDYSMMVVMIMVLLAGMTKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNKLLLV 244
Cdd:PRK08667 189 TGSFELSPL---GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLS 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 245 SGL--SKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGL-MMGI----------------LSLGGwmlAFFHLLT 305
Cdd:PRK08667 265 PELwwGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIiLMGIglyvifgvygldtlalLALGG---ALFHSLN 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 306 HALFKALLFMCAGSIIHSVkDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESL--SMGVVNKFIY 383
Cdd:PRK08667 342 HALFKSLLFLTAGSVVHAT-GTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFfqSFSVADPLIK 420
|
410 420
....*....|....*....|.
gi 938339407 384 LIFFIATGLtmmytFRLTGYL 404
Cdd:PRK08667 421 ILLFSVLAI-----FALTSAL 436
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
54-373 |
1.75e-31 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 129.62 E-value: 1.75e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 54 TLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVL--LFVFSMWALIISPNLIMILLGWDGLGLVSYCLVI 131
Cdd:PRK06521 75 HLRLDALSAFFLLVISLLGAAASLYSLGYFREYEGKGPGAMGFFynLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVI 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 132 YYQNVKS-YNAGMLTALSNRIGDVALLMAITWMLNY-GSWNFVYYFDYCGSDYSMMVVMIMVLLAGMTKSAQIPFSSWLP 209
Cdd:PRK06521 155 ANHREAEiRRAGFLYLLMAHAGALAILLAFGLLAREsGSYDFAAMRAAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLP 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 210 AAM-AAPTPVSALVhSSTLVTAGVYLLIRFNKLLL---VSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLG 285
Cdd:PRK06521 235 RAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLgapGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIG 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 286 LMMGILSLG--------------GWMLAFFHLLTHALFKALLFMCAGSIIHSVKdTQDIRFLGSMVQGMPFTCVAMNVAN 351
Cdd:PRK06521 314 IIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGC 392
|
330 340
....*....|....*....|..
gi 938339407 352 LSLCGVPFLSGFYSKDLILESL 373
Cdd:PRK06521 393 LAISALPPLNGFVSEWLLLQSL 414
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
65-365 |
9.97e-29 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 120.79 E-value: 9.97e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 65 LGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVKSYNAGML 144
Cdd:PRK07390 95 LELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAAR 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 145 TA-LSNRIGDVALLMAITWMLNY-GSWNFVYYFDYCGSDYSMMVVMIMV---LLAG-MTKSAQIPFSSWLPAAMAAPTPV 218
Cdd:PRK07390 175 DAfLTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAATANLDPLTATLLglaLIAGpTGKCAQFPLHLWLDEAMEGPNPA 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 219 SALvHSSTLVTAGVYLLIRFNKLLLVSGL-SKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLGGWM 297
Cdd:PRK07390 255 SIL-RNSVVVATGAWVLIKLQPVLALSPVaLTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPD 333
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 938339407 298 LAFFHLLTHALFKALLFMCAGSIIHSvKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYS 365
Cdd:PRK07390 334 IALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
60-334 |
1.26e-28 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 119.80 E-value: 1.26e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 60 MSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVKsy 139
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 140 nAGMLTA----LSNRIGDVALLMAIT-WMLNYGSWNF---VYYFDYCGSDYSMMVVMIMVLLAGMTKSAQIPFSSWLPAA 211
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLsalWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 212 MAAPTPVSALVHSStLVTAGVYLLIRFNKLLLVSGLSKFMLLI-GSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGI 290
Cdd:PRK08168 227 MEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLvGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLE 305
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 938339407 291 LSLGGWMLAFFHLLTHALFKALLFMCAGSIihsVKDTQDIRFLG 334
Cdd:PRK08168 306 CGLGLYELALLHLVAHSLYKAHAFLSASEA---VRDTRLRRLQG 346
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-438 |
5.66e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 117.76 E-value: 5.66e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 58 DWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVK 137
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 138 -SYNAGMLTALSNRIGDVALLMAITWMLN-YGSWNFV--------YYFDYCGSDY-----SMMVVMIMVLLAGMTKSAQI 202
Cdd:PRK12667 161 dAVEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNMAdlsakirgLSFPLTGGLAgnpplALGVALALALWAFTIKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 203 PFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNKLL---------LVSGLSKFMLLIGSLTMLMAGLGAMQEFDL 272
Cdd:PRK12667 241 PNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIfgispslidFRAALSPILIILGAVSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 273 KSIIALSTLSQLGLMMGILSLG---GWMLAFFHLLTHALFKALLFMCAGSIIHSVKdTQDIRFLGSMVQGMPFTCVAMNV 349
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGtqlGLAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 350 ANLSLCGVPFLSGFYSKDLILESLsMGVVNKFIYLIFFIATGLTMMYTFRLTgYLMGFKYSFNSLSSLHDSNSSMVVgII 429
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNAL-LESGFYLPALVLLIASAISLVGYFRAW-YSLFFGKPKSGEEVEHKESPSMSV-VI 475
|
....*....
gi 938339407 430 LLLVVAVVG 438
Cdd:PRK12667 476 LVLALAVLI 484
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-373 |
8.16e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 110.81 E-value: 8.16e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 54 TLLFDWMSLYFLGLVSLISSLVILYSAgymenEVNLNRFI-MLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIY 132
Cdd:PRK07234 62 TLRADALSGYFILTNALVTLAVIFYCW-----ESAKTRFFyAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAY 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 133 YQNVKSYNAGM-LTALSNrIGDVALLMAItwMLNYGSWNFVYYFDYCGSDYSMMVVMIMVLLAgmtKSAQIPFSSWLPAA 211
Cdd:PRK07234 137 PRTDRAIWVGLrYLFYSN-VAMLFYLIGA--VLVYQANGTFAFSGLATADPEAFALIALGLLV---KGGIFVSGLWLPLT 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 212 MAAPTPVSALVHSSTLVTAGVYLLIRFnkLLLVSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMgil 291
Cdd:PRK07234 211 HSEAEPPVSALLSGVVVKAGVFPLVRC--ALDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFIL--- 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 292 sLGGWMLAFFHlLTHALFKALLFMCAGsIIHSVKDTQDIRflgsmvQGMPF-TCVAMNVANLSLCGVPFLSGFYSKDLIL 370
Cdd:PRK07234 286 -AAPLVGGLYA-LAHGLVKSTLFLCAG-ALPSRNFTELIS------QMLGIgKWIPLTMASFSIAGFPLLAGFVSKVLTL 356
|
...
gi 938339407 371 ESL 373
Cdd:PRK07234 357 KNL 359
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
62-454 |
9.56e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 104.90 E-value: 9.56e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 62 LYFLGLVSLISSLVILYSAGYMENEV--NLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVKSY 139
Cdd:PRK06589 86 LIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISL 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 140 NAG-------MLTALSNRIGDVALLMAITWMLNYGSWNFVYYFDYcgsdysmmVVMIMVLLAGMTKSAQIPFSSWLPAAM 212
Cdd:PRK06589 166 SGGykylkilMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQS--------IILLLMFIYGIAKTAIFPVHSWLPAAM 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 213 AAPTPVSALVHSSTLVTAGVYLLIRFnkLLLVSGLS---------KFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQ 283
Cdd:PRK06589 238 VAHYPVSALLHAVIVVKTGLFCIYKI--LLYIFGLSylqrifaefNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQ 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 284 LGLMMG---ILSLGGWMLAFFHLLTHALFKALLFMCAGSIIhSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFL 360
Cdd:PRK06589 316 LSLALLsafILTPKALGAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIF 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 361 SGFYSKDLILESLS---MGVVNKFIYLIFFIATGLTMMYTFRLTGYLmgFKYSFNSLSSLHDSNSSMVVGIILLLVVAVV 437
Cdd:PRK06589 395 SGFISKFLILLAASeqnQPWLSIIVMLVVIASSILSALYLLKILSSI--YKPSLSENSFITKSLPYLMQISVITCCCALT 472
|
410
....*....|....*..
gi 938339407 438 GGCSLSWLIFPSPLVII 454
Cdd:PRK06589 473 LFYFIQILIREFLAYIT 489
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-446 |
8.82e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 102.10 E-value: 8.82e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 58 DWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNV- 136
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTw 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 137 KSYNAGMLTALSNRIGDVALLMAITWML-NYGSWNFVYYFDYCGSDYSMMVVMIMVLLAG--MTKSAQIPFSSWLPAAM- 212
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLAVKMSENPTVVAKIALALFIAglAMKSGAVPVHMWLPDAYp 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 213 AAPTPVSALVHSSTLvtAGVYLLIR-----FNKLLLVSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLM 287
Cdd:PRK08376 249 AAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYM 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 288 M-----GILSLGGWML----------AFFHLLTHALFKALLFMCAGSIIHSVkDTQDIRFLGSMVQGMPFTCVAMNVANL 352
Cdd:PRK08376 327 LlglgvGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLIGAA 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 353 SLCGVPFLSGFYSKDLILESLSMgvVNKFIYLIFFIATGLTMMYTFRLTgYLMGFKYSFNSLSSLHDSNSSMVVGIIlLL 432
Cdd:PRK08376 406 AIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLASFVKVF-HTAFFGPPSEKVMNVKEPPKPMLVPML-IL 481
|
410
....*....|....
gi 938339407 433 VVAVVGGCSLSWLI 446
Cdd:PRK08376 482 AIAIIGMGLFPWQI 495
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
54-401 |
3.31e-22 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 100.84 E-value: 3.31e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 54 TLLFDWMSLYFlglvSLISSLVILYSAGYMENEVNLNR--FIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYcLVI 131
Cdd:PRK08668 64 TFTLTHLSWFF----AMISLLVIFSVAFFMVSEKTKNDayFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSF-MMV 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 132 YYQNVKSYNAGMLTALSNRIGDVALLMAITWMLN-YGSWNF--VYYFDYCGSDYSM-MVVMIMVLLAGMTKSAQIPFSSW 207
Cdd:PRK08668 139 PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFadISQGLINDTSTGFaLIVFLFLLAFGVAKAGIFPLHVW 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 208 LPAAMA-APTPVSAlVHSSTLVTAGVYLLIR----------FNKLLLVSGLSKF---MLLIGSLTMLMAGLGAMQEFDLK 273
Cdd:PRK08668 219 APDAYSeAPQSFSA-VLSGQLSKLGAYGFLLvlyvlpgtklFSEFGTYRGVPLFnyiLAWLGNISIIVGTLMAILQEDIK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 274 SIIALSTLSQLGLMMGILSLG---GWMLAFFHLLTHALFKALLFMCAGSIIHSVKDTQdIRFLGSMVQGMPFTCVAMNVA 350
Cdd:PRK08668 298 KLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTK-ISEMGGLIEKMPFTFAMYLVA 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 938339407 351 NLSLCGVPFLSGFYSKDLILESL-SMGVVnkFIYLIFFIATGLTMMYTFRLT 401
Cdd:PRK08668 377 IISLAGIPPMSGFASKWLIFEALiSKGMP--ITAFMAFFGSIGSFLYVFRPL 426
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
58-452 |
4.41e-22 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 99.77 E-value: 4.41e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 58 DWMSLYFLGLVSLISSLVILYSAGYMENEVNLnrFIMLVLLFVFSMWALIISPNLIMILLGWDgLGLV-SYCLVIYYQNV 136
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILASWNEIKKRPKL--YYALLLLLEAGMIGVFLALDLFLFYVFWE-LMLIpMYFLIGIWGGE 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 137 KSYNAGMLTALSNRIGDVALLMAITWM-LNYGSWNFvYYFDYCGSDYSM---MVVMIMVLLAGMTKSAQIPFSSWLP-AA 211
Cdd:COG1008 158 RRIYAAIKFFLYTLAGSLLMLVAILALyFLAGALTF-DIAELAAAPLPLtaqLLLFLAFFIAFAVKVPMFPFHTWLPdAH 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 212 MAAPTPVSALvHSSTLVTAGVYLLIRFNKLLL---VSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLM- 287
Cdd:COG1008 237 VEAPTAGSVL-LAGVLLKMGGYGLLRFALPLFpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVl 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 288 MGILSLG--GWMLAFFHLLTHALFKALLFMCAGSIIHSVKdTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYS 365
Cdd:COG1008 316 LGIFALNplGLQGAVLQMVSHGLITAALFLLVGVLYDRTH-TRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 366 KDLILeslsMGVVNKFIYLIFFIATG--LTMMYTFRLTGYLMgFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGcsls 443
Cdd:COG1008 395 EFLVL----LGAFQVNPWLAILAALGliLTAAYLLWMYQRVF-FGPLKEELAELPDLNPRELAVLAPLAALILLLG---- 465
|
....*....
gi 938339407 444 wlIFPSPLV 452
Cdd:COG1008 466 --LYPQPLL 472
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
44-479 |
7.12e-21 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 96.50 E-value: 7.12e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 44 FSFVGTEVVgTLLFDWMSLYFLGLVSLISSLVILYSAGymeneVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLG 123
Cdd:PRK12668 53 VTFLGFDLV-LGRVDKLSRVFGLIFGIMAFIGVIYALH-----VKDPGQHVAALLYVGSALGAVFAGDLLTLFVFWELMA 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 124 LVSYCLVIYYQNVKSYNAGMLTALSNRIGDVALLMAITWMLNY-GSWNFVYYFDYcGSDYSMMVvmimvLLAGMTKSAQI 202
Cdd:PRK12668 127 FTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAEtGSFAFGAIAGL-GGTAAWLI-----LIGFGVNAAFP 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 203 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRfnklllvsGLSKFMLLIGsLTMLMAGLG---AMQEFDLKSIIALS 279
Cdd:PRK12668 201 PLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR--------AFPGTELLIY-IGAAMAVYGvffALLENDLRRLLSYH 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 280 TLSQLGLMM---GI---LSLGGwmlAFFHLLTHALFKALLFMCAGSIIHSVKdTQDIRFLGSMVQGMPFTCVAMNVANLS 353
Cdd:PRK12668 272 IVSQVGYMVagiGIgtaLAING---AVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMPLTALFCLVGALS 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 354 LCGVPFLSGFYSKDLILE-SLSMGVVnkFIYLIFFIATGLTMMYTFRLTGYLMGFkySFNSLSSLHDSNSSMVVGIILLL 432
Cdd:PRK12668 348 ISAFPLFSGFVSKSMIISaAGEDHYV--WVWLLLLLASAGTFLHFGIKLPYFAFF--GGDSGLRVKDAPRNMLVAMGIAA 423
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 938339407 433 VVAVVGGcslswlIFPSPLVIILP--------SWMKLLTLMVTLVGGWLSYLIMK 479
Cdd:PRK12668 424 FLCIAIG------VYPQALYALLPypvdyepyTASHVLEQLQLLLFTALAFVLLR 472
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
64-437 |
1.01e-20 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 95.60 E-value: 1.01e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 64 FLGLVSLISSLVILYSAGYMENEvNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVKSYNAGM 143
Cdd:PRK08377 83 FVLIIAIVSFIMSIFSLKAVEVE-PIDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASM 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 144 LTALSNRIGDVALLMAITwmLNYGSWNFVYYFDYCGSDYSMMVVMIMVLLAGM-----TKSAQIPFSSWLPAA-MAAPTP 217
Cdd:PRK08377 162 KYIVLGGIGSSFFLIGVA--LIYGATGTLNMAHIAQLAGTIDPTVAQVGLALLifglaVEAELFPLNAWAPDAyQAAPHP 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 218 VSALVhSSTLVTAGVYLLIRFNKLLLV----SGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSL 293
Cdd:PRK08377 240 ITVMF-SAFVVKAGLYAMARILYLMQNangwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALAL 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 294 G---GWMLAFFHLLTHALFKALLFMCAGSIIHSVKDTQDIRFLGsMVQGMPFTCVAMNVANLSLCGVPFLSGFYSK-DLI 369
Cdd:PRK08377 319 GtqaGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEG-LGKRMPLTALALTIGALSTVGIPLFNVFWSKfRII 397
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 938339407 370 LESLSMGvvNKFIYLIFFIATGLTMMYTFRLTgYLMGFKYSFNSLSslhdsnSSMVVGIILLLVVAVV 437
Cdd:PRK08377 398 LAGLSAG--YTWPVALVLGASVVEAVYYFRLI-HTMWFKGEGERIR------ENAAIGIILLLLAALI 456
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
58-452 |
2.27e-17 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 84.99 E-value: 2.27e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 58 DWMSLYFLGLVSLISSLVILYSAGYMENEVNLnrFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVK 137
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 138 SYNAGMLTALSNRIGDVALLMAITWMLNYGSWNFVYYFDYCGSDYSM--MVVMIMVLLAGMTKSAQIPFSSWLPAAMA-A 214
Cdd:TIGR01972 154 RIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLLELLNLPLPFGvqTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 215 PTPVSALVhSSTLVTAGVYLLIRFNKLLLVSGLSKFMLLIGSL---TMLMAGLGAMQEFDLKSIIALSTLSQLGL-MMGI 290
Cdd:TIGR01972 234 PTAGSVIL-AGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALgviAIIYGALIALAQTDIKRLIAYSSISHMGFvLLGI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 291 LSLGGWML--AFFHLLTHALFKALLFMCAGsIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDL 368
Cdd:TIGR01972 313 FSFNELGIsgAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 369 ILeslsMGVVNKFIYLIFFIATG--LTMMYTFRLTGYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGcslswlI 446
Cdd:TIGR01972 392 IL----LGSFKVNPVVAFLAALGivLAAAYMLTLYKRVFFGELSNPEVAEFPDLNGREIAVLAPLVVLILFLG------L 461
|
....*.
gi 938339407 447 FPSPLV 452
Cdd:TIGR01972 462 YPNPLL 467
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
53-452 |
2.66e-17 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 84.78 E-value: 2.66e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 53 GTLLFDWMSLYFLGLVSLISSLVILYSAGYME-NEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLV- 130
Cdd:COG1007 64 GMFVVDGFALFFKLLILLAALLVLLLSRDYLErRGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVa 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 131 IYYQNVKSYNAGM----LTALSNRI---GdVALLMAITWMLNYGSWNFVYYFdycGSDYSMMVVMIMVL-LAGMT-KSAQ 201
Cdd:COG1007 144 FRRDDRRSSEAALkyflLGALSSGFllyG-ISLLYGATGSLNLAGIAAALAA---GGANSPLLLLGLVLvLAGLAfKLSA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 202 IPFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRFNKLLLVSGLSKFMLLIGSL---TMLMAGLGAMQEFDLKSII 276
Cdd:COG1007 220 VPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLVEAFPGLAADWQLLLAVLavlSMTVGNLAALAQTNVKRML 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 277 ALSTLSQLG-LMMGILSLG--GWMLAFFHLLTHALFKALLFMCAGSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLS 353
Cdd:COG1007 298 AYSSIAHAGyLLLGLAAGTplGVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLS 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 354 LCGVPFLSGFYSKDLILESLsmgVVNKFIYL--IFFIATGLTMMYTFRLTGYLmgFKYSFNSLSSLHDSNSSMVVGIILL 431
Cdd:COG1007 378 LAGIPPTAGFFGKFYVFSAA---VEAGLYWLavIAVLNSVISAYYYLRVVKAM--YFDEPEEEAPISAPPGLRVALVIAA 452
|
410 420
....*....|....*....|.
gi 938339407 432 LVVAVVGgcslswlIFPSPLV 452
Cdd:COG1007 453 LLVLLLG-------IFPGPLL 466
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
55-455 |
3.33e-17 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 84.60 E-value: 3.33e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 55 LLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVL--------LFVFSMWALIISPNLIMILLGWDGLGLVS 126
Cdd:PRK06458 65 FFIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVEHGELSPVTLrlyygmyqLFLFTMLLALTSNNLGLMWVAIEATTLSS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 127 YCLVIYYQNVKSYNAG--------------------MLTALSNRIGDVALLMAITWMLNYGSwnfvyyfdycGSDYSMMV 186
Cdd:PRK06458 145 ALLVGIYRTRASLEAAwkyiiicsvgvafalfgtilVYANAATVMGDGEMAILWTELLKHAS----------LLDPTLMK 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 187 VMIMVLLAGM-TKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNKLLLVSGLSKF----MLLIGSLTML 260
Cdd:PRK06458 215 LAFVFLLIGFgTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSDFpgrlLLIFGLLSVL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 261 MAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLGGwMLAFF----HLLTHALFKALLFMCAGSIIHsVKDTQDIRFLGSM 336
Cdd:PRK06458 294 VAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGG-PLGIFaallHMLNHSLTKSAIFFASGNVLQ-KYGTRDINVIRGL 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 337 VQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILES-LSMGVVNKFIYLIFFIATGLTMMyTFRLTGylMGFKYSFNSLS 415
Cdd:PRK06458 372 LKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAgLARGPLLIAILLLLLLTLAFAAL-VRRVAG--MVFGEPPEAVN 448
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 938339407 416 SLHDSNSSMVVGIILLLVVAVVGgcslswLIFPSPLVIIL 455
Cdd:PRK06458 449 RGDLGWLTTSPMFVHLVLVLVLG------LYIPQPLVRWL 482
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
48-321 |
1.13e-16 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 83.16 E-value: 1.13e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 48 GTEVVGTLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWdGLGLVSY 127
Cdd:PRK08601 61 GDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCW-GATLLGL 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 128 CLVIyyqNVKSY-----NAGMLTALSNRIGDVALLMAITWM-LNYGSWNFVYYFDYCG----SDYSMMVVMIMVLLAGMT 197
Cdd:PRK08601 140 TLLI---GLNKGwkvarEAAKISGMLFLISWLALALAIVWLfIATGEWQLTSVLSNENlaqlGTWEKTGINLLLILAVMI 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 198 KSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFNKLLLVSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIA 277
Cdd:PRK08601 217 PAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLIGTGISLVQVDYKRQLV 295
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 938339407 278 LSTLSQLGLMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSII 321
Cdd:PRK08601 296 GSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
184-398 |
1.24e-16 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 82.69 E-value: 1.24e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 184 MMVVMIMVLLAGMtKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLV---SGLSKFMLLIGSLTML 260
Cdd:PRK12663 207 TTIALLFLLAFGM-KAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPqerELLHPLLATMAAITMV 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 261 MAGLGAMQEFDLKSIIALSTLSQLGLMM---GILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHsVKDTQDIRFLGSMV 337
Cdd:PRK12663 285 IGALGALAYKDIRRIAGYQVISSIGFILlglALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLY 363
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 938339407 338 QGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILE-SLSMGvvnKFIYLIFFIATGLTMMYTF 398
Cdd:PRK12663 364 RKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNG---AYILLALMLITSLITMYSL 422
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-372 |
8.68e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 77.32 E-value: 8.68e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 185 MVVMIMVLLAGMTKSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFNKLLLVSG-LSKFMLLIGSLTMLMA 262
Cdd:PRK12665 209 TALFAVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGgLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 263 GLGAMQEFDLKSIIALSTLSQLGLMMGILSLG---GWMLAFFHLLTHALFKALLFMCAGsIIHSVKDTQDIRFLGSMVQG 339
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALStvaGLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKA 366
|
170 180 190
....*....|....*....|....*....|...
gi 938339407 340 MPFTCVAMNVANLSLCGVPFLSGFYSKDLILES 372
Cdd:PRK12665 367 SPLLAVLFFVPALNLGGIPPFSGFIGKVALLEA 399
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
184-372 |
2.67e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 75.37 E-value: 2.67e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 184 MMVVMIMVLLAGMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFNKLLLVSGLS---KFMLLIGSLTM 259
Cdd:PRK07691 208 ITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSfthYLILILALLTI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 260 LMAGLGAMQEFDLKSIIALSTLSQLGLMM---GILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHsVKDTQDIRFLGSM 336
Cdd:PRK07691 287 IFGVIGAVAYFDIKKIIIYNIMIAVGVILvgvAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGL 365
|
170 180 190
....*....|....*....|....*....|....*.
gi 938339407 337 VQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILES 372
Cdd:PRK07691 366 IKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEG 401
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
53-373 |
2.57e-13 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 72.16 E-value: 2.57e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 53 GTLLFDWMSLYFLGLVSLISSLVILYSAGYMENEvNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIY 132
Cdd:PRK05777 67 GMLVVDGFALFLKGLILLASLLALLLARPYLEDR-GRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAAL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 133 -YQNVKSYNAGM----LTALSNRIgdvaLLMAITWMLNY-GSWNFVYYFDYCGSDYSMMVVM---IMVLLAGMT-KSAQI 202
Cdd:PRK05777 146 rRDRRRSLEAAIkyfvLGALASGF----LLYGMSLLYGAtGSLSFAGIAKALADGSGNSLLLlfgLVFLLVGLAfKLSAV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 203 PFSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFNKLLLVSG---LSKFMLLIGSLTMLMAGLGAMQEFDLKSIIAL 278
Cdd:PRK05777 222 PFHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGLsedWQQVLAIIAIASMLVGNLAALSQTNIKRLLAY 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 279 STLSQLG-LMMGILSLGGWML--AFFHLLTHALFKALLFMCAGSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLC 355
Cdd:PRK05777 301 SSIAHAGyLLVGLAAGTAEGYsaVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLA 380
|
330
....*....|....*...
gi 938339407 356 GVPFLSGFYSKDLILESL 373
Cdd:PRK05777 381 GIPPTAGFWGKFYVFEAA 398
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
179-494 |
3.39e-12 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 69.09 E-value: 3.39e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 179 GSDYSMMVVMIMVLLAGMtksaqIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNKLLLVSGL--SKFMLLIG 255
Cdd:PRK08042 179 GSDIWLLGVIGFGLLAGI-----IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAPLwwGVALLVLG 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 256 SLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLG--------------GWMLAFFHLLTHALFKALLFMCAGSII 321
Cdd:PRK08042 253 MITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVW 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 322 HSVkDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILES-LSMGVVNKFIYLIF--FIATGLTMmyTF 398
Cdd:PRK08042 333 FRT-GHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSfFKLSNSGAFVARLLgpLLAVGLAI--TG 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 399 RLTGYLMGFKYSFNSLSSLHDSNSS--------MVVGIILLLVVAVVGGCSLSWLI------FPSPLVIILPSWMKLLTL 464
Cdd:PRK08042 410 ALAVMCMAKVYGVTFLGAPRTKEAEnatcapllMSVSVVALAICCVIGGVAAPWLLpmlsaaVPLPLEPANTTVSQPMIT 489
|
330 340 350
....*....|....*....|....*....|
gi 938339407 465 MVTLVGGWLSYLIMKFdlmenaFKGYKMKS 494
Cdd:PRK08042 490 LLLIACPLLPFIIMAI------FKGDRLPS 513
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-454 |
3.66e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 68.61 E-value: 3.66e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 55 LLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLN---RFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVI 131
Cdd:PRK12662 72 LRVDILSATMLVLVNFIAVMSVLYGIYPNRKEISVNkipSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVA 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 132 YYQNVKSYNAGMLTALSNRIG------DVALLMAITWMLNYGSWNFVYYFDYCGSDYSMMVVMIMVLLagMTKSAQIPFS 205
Cdd:PRK12662 152 MGRDKKALVAAFEYLIIGTIGatfyliGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGL--FIKAALFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 206 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-------NKLLLVSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIAL 278
Cdd:PRK12662 230 KWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 279 STLSQLG---LMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVkDTQDIRFLGSMVQGMPFTCVAMNVANLSLC 355
Cdd:PRK12662 310 SSISHIGyiiLAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLI 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 356 GVPFLSGFYSKDLILESLsMGVVNKFIYLIFFIATGLTMMYTFRLTGYLmgfkYSFNSLSSLHDSNSSMVVGIILLLVVA 435
Cdd:PRK12662 389 GMPPTSGFVAKWYILDAF-IKSNAWIGLVVLLVGSGLSVIYVWKIVEAL----YFESRMVESKANDKAFKTPNAMVLCIW 463
|
410
....*....|....*....
gi 938339407 436 VVGGCSLSWLIFPSPLVII 454
Cdd:PRK12662 464 IMAILSIIVGIYPIPLTLI 482
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
189-374 |
5.61e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 65.16 E-value: 5.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 189 IMVLLAGMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNKLLLVSGL----SKFMLLIGSLTMLMAG 263
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAaeqfSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 264 LGAMQEFDLKSIIALSTLSQLGLMMGILSLGG-----WMLafFHLLTHALFKALLFMCAGsIIHSVKDTQDIRFLGSMVQ 338
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTplalfWML--FHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFR 365
|
170 180 190
....*....|....*....|....*....|....*.
gi 938339407 339 GMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLS 374
Cdd:PRK08676 366 LQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLG 401
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
202-470 |
6.15e-11 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 64.84 E-value: 6.15e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 202 IPFSSWLPAAMA-APTPVSALvHSSTLVTAGVYLLIRFNKLLLVSGLSKFMLLIGSLTMLM---AGLGAMQEFDLKSIIA 277
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAiiyGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 278 LSTLSQLG-LMMGILSLGGWML--AFFHLLTHALFKALLFMCAGSIIHSVKdTQDIRFLGSMVQGMPFTCVAMNVANLSL 354
Cdd:PRK05846 307 YSSISHMGfVTLGIFAGNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 355 CGVPFLSGFYSKDLILeslsMGVVNKFIYLIFFIATG--LTMMYTFRLTGYLMgFKYSFNSLSSLHDSNSSMVVGIILLL 432
Cdd:PRK05846 386 LGLPGTSGFVGEFLIL----LGSFQVNPVIAFIATTGliLAAVYSLWLYQRVM-FGPVKNEVAKLKDLNGRELLILLPLV 460
|
250 260 270
....*....|....*....|....*....|....*....
gi 938339407 433 VVAVVGGcslswlIFPSPLV-IILPSWMKLLTLMVTLVG 470
Cdd:PRK05846 461 ALLLLLG------VYPKPLLdVIHPSVENLLQWVAPSVA 493
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
54-400 |
7.28e-11 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 64.67 E-value: 7.28e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 54 TLLFDWMSLYFLGLVSLISSLVILYSAGymENEVNlNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYY 133
Cdd:PRK06277 67 TYLFNPAKQIIIFVLSLIASLVLITGLG--EKKSS-GLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIAS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 134 QNVKSYNAGMLTALSNRIGDVALLMAITWMLNY-GSWNFVYYFDYCGSDYSMMVVMI---MVLLAGMTKSAQIPFSSWLP 209
Cdd:PRK06277 144 GTEEAYKAALKYMILGNVAGSILLLGIGFLLAStGTLNITDIHNALLVNPTSPVIYGgllLLIFGLLYGSGLPPFHTIKS 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 210 AAMAAPTP-VSALVHSS---TLVTAGVYLLIRFNKLLLVSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLG 285
Cdd:PRK06277 224 DIYAKAKPfGSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGG 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 286 LMMGILSLG---GWMLAFFHLLTHALFKALLFMCAGsIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSG 362
Cdd:PRK06277 304 YVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNG 382
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 938339407 363 FYSKDLILE-SLSMGVVNKFIYLIFF-IATGLTMMYTFRL 400
Cdd:PRK06277 383 FQSKLMLAQaAMQANMPELAIIMIIVsIGTFVSMMKAFYL 422
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
64-453 |
3.38e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 59.42 E-value: 3.38e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 64 FLGLVSLISSLVILYSAGYMENEVNLNRFI-MLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNvKSYNAG 142
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLsSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 143 MLTALSNRIGDVALLMAITWMLNYGSWNFVYYfdycgsdySMMVVMIMVLLAGMTKSAQIPF--SSWLPAAMA-APTPVS 219
Cdd:PRK06459 124 VFMAFGELSTVLILAGFAWAFIISGTTNFSYL--------PSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGnAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 220 AlVHSSTLVTAGVYLLIRFNKLLL---VSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSL--- 293
Cdd:PRK06459 196 A-ILSATMTLMGVYGILKMTILTQtipIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymv 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 294 --------GGWMLA--FFHLLTHALFKALLFMCAGSIihsvkDTQDIRFLGSMVQGMpfTCVAMNVANLSLCGVPFLSGF 363
Cdd:PRK06459 275 tkqlitsiEHFSLItvILYSFAHSVAKTGLFLSSGLQ-----EKQSITYSKKIRNRW--IELGLTLLASSLSGLLPNIGG 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 364 YSKDLILESLSMG--VVNKFIYLIFFIATGLTMMYTFRLTGYLMGFkYSFNSLSSLHDSNSSMV--VGIILLLVVAVVGG 439
Cdd:PRK06459 348 VASWLLLESLFMFayVLHNVISILFIVTGAIIAMGEGLATALLIKY-ITYTSLFRNTKEQLSKIkkYPILLSALIVLILG 426
|
410
....*....|....
gi 938339407 440 CSLSWLIFPSPLVI 453
Cdd:PRK06459 427 FTLPYLISPFKTST 440
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
183-446 |
3.74e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 52.78 E-value: 3.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 183 SMMVVMIMVLLAGMTKSAQIPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFNKLLLVSG---LSKFMLLIGSLT 258
Cdd:PRK06473 203 TQLLLLAPILVGFGIKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEAwvyLAPWLATWAVVS 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 259 MLMAGLGAMQEFDLKSIIALSTLSQLGLMM------GILSLGGwmlAFFHLLTHALFKALLFMCAGsIIHSVKDTQDIRF 332
Cdd:PRK06473 282 VLYGASCAIAQKDMKKMVAYSSIGHMGYILlaaaaaTPLSILA---AVFQMISHGLISALLFLLVG-VVYKKTGSRDVDV 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 333 LGSMV---QGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILEslsmGVVNKFIY--LIFFIATGLTMMYtFRLTGYLMGF 407
Cdd:PRK06473 358 LRGLLnpeRGLPITGSLMILGVMASAGIPGMVGFIAEFLVFR----GSFPIFPVqtLLCMIGTGLTAVY-FLLLVNRVFF 432
|
250 260 270
....*....|....*....|....*....|....*....
gi 938339407 408 KYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLI 446
Cdd:PRK06473 433 GRLTAELSNLPRVLWSERLPALVLAVLIVVLGIQPSWLV 471
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
151-363 |
7.40e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 51.98 E-value: 7.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 151 IGDVALLMAITWMLNY-GSWNFVYYFDYCGSDYSMMVVMIMVLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVT 229
Cdd:MTH00217 171 IGSVFMLLGIFTLYSYaGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLK 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 230 AGVYLLIRFNKLLLVSGLSKFMLLIGSLTMLM---AGLGAMQEFDLKSIIALSTLSQLGLM-MGILS--LGGWMLAFFHL 303
Cdd:MTH00217 251 LGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAiiyGSLTTCRQVDLKRIIAYSSVAHMGLVtLGIFShtIQGLVAAIFLM 330
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 304 LTHALFKALLFMcAGSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGF 363
Cdd:MTH00217 331 LAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNF 389
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
58-396 |
1.03e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 51.64 E-value: 1.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 58 DWMSLYFLGLVSLISSLVIlYSAGYMENEVNLnrFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQNVK 137
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAI-YSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 138 SYNAGM----LTALSNRIgDVALLMAITWMLNYGSWNFVYYFDYCGSDYSMMVVMIMVLLAGMTKSAQIPFSSWLPAAMA 213
Cdd:PRK07363 155 RGYASIkfliYTAVSGLL-VLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYT 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 214 APTPVSALVHSSTLVTAGVYLLIRFNKLLLV---SGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMM-- 288
Cdd:PRK07363 234 EASPAVAILLGGVLAKLGTYGLLRFGLQLFPqtwSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILva 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 289 ----GILSLGGwmlAFFHLLTHALFKALLFMCAGSIIHSV--KDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSG 362
Cdd:PRK07363 314 aaagTQLSLLG---AVAQMISHGLILALLFHLVGIVERKVgtRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVG 390
|
330 340 350
....*....|....*....|....*....|....*.
gi 938339407 363 FYSKDLILEslsmGVVNKFIY--LIFFIATGLTMMY 396
Cdd:PRK07363 391 FVAEFIVFQ----GSFSTFPIptLLCIVASGLTAVY 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
53-363 |
5.18e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 49.15 E-value: 5.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 53 GTLLF--DWMSLYFLGLVSLISSLVILYSAGYMENEVNlnRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLV 130
Cdd:MTH00226 94 GPLVFavDGISIYFIILTGFIVPCSILISWHSVKYLTK--SFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 131 -IYYQNVKSYNAGMLTALSNRIGDVALLMAITWMLN-YGSWNFVYYF--DYCGSDYSMMVVMIMVLLAGMTKSAQIPFSS 206
Cdd:MTH00226 172 gIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNiHGTTDYLTLAscSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHI 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 207 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLVSG---LSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQ 283
Cdd:MTH00226 252 WLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGaqnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAH 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 284 LGLMMGIL---SLGGWMLAFFHLLTHALFKALLFMCAgSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFL 360
Cdd:MTH00226 332 MGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
...
gi 938339407 361 SGF 363
Cdd:MTH00226 411 GNF 413
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
53-366 |
1.26e-05 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 48.08 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 53 GTLLFDWMSLYFLGLVSLISSLVILYSAGYMEN-EVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVI 131
Cdd:CHL00049 73 GNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECtEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 132 YY-QNVKSYNAGMLTALSNRIGDVALLMAITWMlnYGS-------WNFVYYFDYCGSDYS--MMVVMIMVLLAGMTKSAQ 201
Cdd:CHL00049 153 YTkKDVRSNEATMKYLLMGGASSSILVYGFSWL--YGLsggeielQEIVNGLINTQMYNSpgISIALIFITVGIGFKLSL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 202 IPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNKLLLVSGLSKFMLLIG---SLTMLMAGLGAMQEFDLKSIIA 277
Cdd:CHL00049 231 APFHQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPFYFSSNEWHLLLEilaILSMILGNLIAITQTSMKRMLA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 278 LSTLSQLG-LMMGILSlGGWMLAFFHLLTHALFkaLLFMCAGS----IIHSVKD-TQDIRFLGSMVQGMPFTCVAMNVAN 351
Cdd:CHL00049 310 YSSIGQIGyVIIGIIV-GDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTgTDNIRDYAGLYTKDPFLALSLALCL 386
|
330
....*....|....*
gi 938339407 352 LSLCGVPFLSGFYSK 366
Cdd:CHL00049 387 LSLGGIPPLAGFFGK 401
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
54-92 |
1.76e-05 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 42.03 E-value: 1.76e-05
10 20 30
....*....|....*....|....*....|....*....
gi 938339407 54 TLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRF 92
Cdd:pfam00662 12 GFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
187-452 |
1.15e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 45.05 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 187 VMIMVLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLVSG---LSKFMLLIGSLTMLMAG 263
Cdd:MTH00204 211 LLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAAseyFAPLIVMLSVIAVIYGS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 264 LGAMQEFDLKSIIALSTLSQLGLM-MGILS--LGGWMLAFFHLLTHALFKALLFMcAGSIIHSVKDTQDIRFLGSMVQGM 340
Cdd:MTH00204 291 LTTCRQVDFKRLIAYSSVAHMGLVpLGLFThtIEGLVAAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTM 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 341 PFTCVAMNVANLSLCGVPFlsgfySKDLILESLSMGVVNKFIY-LIFFIATGLTMMYTFRLTGY-LMGFKYSFNSLSSLH 418
Cdd:MTH00204 370 PLFVIIMLVLSLANMGFPL-----SCNFVGEFFSLLAAFEYSLgLGVLVTSGMVWSAAYSLYLYnRISFGGGSNYLLFSR 444
|
250 260 270
....*....|....*....|....*....|....
gi 938339407 419 DSNSSMVVGIILLLVVAVVGGcslswlIFPSPLV 452
Cdd:MTH00204 445 DLNRRELLAILPLIIAIFLLG------IVPFIII 472
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
188-375 |
1.92e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 44.04 E-value: 1.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 188 MIMVLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLLLvsglSKFMLLIGSLTMLMAGLGAM 267
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLN----PTLLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 268 QEFDLKSIIALSTLSQLGLMMGILSLGGwMLAFFHLLTHALFKALLFMcagsIIHSVKdTQDIRFLGSMVQGMPFTCVAM 347
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYSP-KLTLLTFYIYILMTTPMFL----TLNTTS-TKTLKDMMTSWTKSPTLNTTL 244
|
170 180
....*....|....*....|....*...
gi 938339407 348 NVANLSLCGVPFLSGFYSKDLILESLSM 375
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILQELTK 272
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
53-366 |
2.40e-04 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 43.89 E-value: 2.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 53 GTLLFDWMSLYFLGLVSLISSLVILYSAGYMENE-VNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVI 131
Cdd:PRK02504 72 GSFNADNLSIAFRAIIALSTLVTLLMSWRYVEQSgTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 132 YYQNVKSYNAGMLTALSNRIGDVALL---MAITWMLNYGSWNFVYYFDYCGSDYSMMVVMIMVL-LAGMT-KSAQIPFSS 206
Cdd:PRK02504 152 YMKRDPRSNEAALKYLLIGAASSAIFlygSSLLYGLSGGSTQLSAIALALITSPSLGLALALVFvIAGIAfKISAVPFHQ 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 207 WLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRfnklLLVSGLSKF-------MLLIGSLTMLMAGLGAMQEFDLKSIIAL 278
Cdd:PRK02504 232 WTPDVYeGSPTPVVAFL-SVGSKAAGFALAIR----LLVTAFPSFdeqwkllFTALAILSMVLGNVVALAQTSMKRMLAY 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 279 STLSQLGLMMGILSLG---GWMLAFFHLLTHALFKALLFMCAgsIIHSVKDTQD-IRFLGSMVQGMPFTCVAMNVANLSL 354
Cdd:PRK02504 307 SSIGQAGFVMIGLVAGteaGYASMVFYLLAYLFMNLGAFACV--ILFSLRTGTDqISDYAGLYQKDPLLTLGLSLCLLSL 384
|
330
....*....|..
gi 938339407 355 CGVPFLSGFYSK 366
Cdd:PRK02504 385 GGIPPLAGFFGK 396
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
55-416 |
4.70e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 43.00 E-value: 4.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 55 LLFDWMSLYFLGLVSLISSLVILYSAGYMENEvNLNRFIMLVLLFVFSMWALII---SPNLIMILLGWDGLGLVSYCLVI 131
Cdd:MTH00206 55 LSYDPLSSPLVILSCWLLPLMFLASQNHMKNE-PINRQRIYITLLIVLQLFLILffsSSNLLLFYILFEASLIPTLLLIT 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 132 YYQNVKS-YNAGMLTALSNRIGDVALLMAITWMLNY-GSWNFVYYFDYCGSDYSMMVVMIMVLLAGMTKSAQIPFSSWLP 209
Cdd:MTH00206 134 RWGNQKErLNAGYYFLFYTLIGSLPLLIALLFLQNSlGSLSLYILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLP 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 210 AAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLL--LVSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLM 287
Cdd:MTH00206 214 KAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILgpSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLV 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 288 -MGILSLGGW--MLAFFHLLTHALFKALLFmCAGSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFY 364
Cdd:MTH00206 294 tAGILSGSPWgfKGALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLF 372
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 938339407 365 SKDLILESL-SMGVVNKFIYLIFFIATGLTMMYTFRLTGYLMGFKYSFNSLSS 416
Cdd:MTH00206 373 GELLIITSLfSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPS 425
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
54-319 |
5.19e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 42.81 E-value: 5.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 54 TLLFDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLgWDGLGLVSYCLVIY- 132
Cdd:MTH00014 54 SLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYI-FFEASLIPTLFLILg 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 133 --YQNVKSyNAGMLTALSNRIGDVALLMAITWMLNYGSWNFVYYFDYC-GSDYSMMVVMIMVLLAGMTKSAQIPFSSWLP 209
Cdd:MTH00014 133 wgYQPERL-QASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEpPSIYLMNLWWLITILAFMVKMPLYTVHLWLP 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 210 AAMAAPTPVSALVHSSTLVTAGVYLLIRFNKLL--LVSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLM 287
Cdd:MTH00014 212 KAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFmhINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLM 291
|
250 260 270
....*....|....*....|....*....|....*
gi 938339407 288 M-GILS--LGGWMLAFFHLLTHALFKALLFMCAGS 319
Cdd:MTH00014 292 TaGIMSntSWGWQGALAMMIAHGLCSSALFALANM 326
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
57-317 |
2.77e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 40.35 E-value: 2.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 57 FDWMSLYFLGLVSLISSLVILYSAGYMENEVNLNRFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIY--YQ 134
Cdd:MTH00205 55 FDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGwgYQ 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 135 NvKSYNAGMLTALSNRIGDVALLMAITWM-LNYGSWNFVYYFDYCGSDYSMMVVMIMVLLAGMTKSAQIPFSSWLPAAMA 213
Cdd:MTH00205 135 P-ERLQASMYMMMYTLCASLPLLIGLFFLnSLNFSLSMFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHV 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 214 APTPVSALVHSSTLVTAGVYLLIRFNKLL--LVSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLMM-GI 290
Cdd:MTH00205 214 EAPVSGSMILAGVLLKLGGYGLIRITSMLykLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVvGV 293
|
250 260
....*....|....*....|....*....
gi 938339407 291 LSLG--GWMLAFFHLLTHALFKALLFMCA 317
Cdd:MTH00205 294 FSNTswGMNGAIIMMVAHGLCSSGMFALA 322
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
189-438 |
2.91e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 40.15 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 189 IMVLLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNKlllvSGLSKFMLLIGSLTMLMAGLGAMQ 268
Cdd:MTH00011 92 LMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTS----HNILPMMTSMAAMSALAGGLGGMN 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 269 EFDLKSIIALSTLSQLGLMMGILSLGGWMLAFFHLLTHALFKALLFMCAGSIIHSVKdtqdirFLGSMVQGMPFTCVAMN 348
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTK------FNSKISSMSQTTSMSLF 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 349 VANLSLCGVPFLSGFYSKDLILESLsMGVVNKFIYLIFFIATGLTMMYTFRLtgyLMGFKYSFNSLSSLHDSNSSMVVGI 428
Cdd:MTH00011 242 IMLLSLGGLPPFTGFMPKLMAIETL-TSNSMILILLVLIVGSLMNLFYYLNL---IFNFMYLSPTFSSLKSAPYEPKTKI 317
|
250
....*....|
gi 938339407 429 ILLLVVAVVG 438
Cdd:MTH00011 318 LISMCTLSLG 327
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-489 |
4.42e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 39.71 E-value: 4.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 51 VVGTLLFDWM-SLYFLGLVS-LISSLVILYSAGYMENEVNLN-RFIMLVLLFVFSMWALIISPNLIMILLGWDGLGLVSY 127
Cdd:PRK12664 21 VLPLLLYDWSePVYNLDLVLfIVLSFSLALIFLYILPIKNMRfSEMLCYLLYYISSIAAISSSSLTLVVIGFEFMALSAL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 128 CLVIYYQNVKSYNAGMLTALSNRIGDVALLMaitwmlnyGSWNFVYYFDYCGsdYSMMVVMIMVLLagmtKSAQIPFSSW 207
Cdd:PRK12664 101 MIIAAGCPGGNIGAFIHYACVHFFSGVLLLV--------GASGQAQNGQYTG--YCKLLFMLGLLI----NCACFPASSW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 208 LPAAMAAPTPVSALVHSstLVTAGVYLLIrfnkLLLVSGLSKFMLLIGSLTMLMAGLGAMQEFDLKSIIALSTLSQLGLM 287
Cdd:PRK12664 167 VVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 288 MGILSLGG-----WMLAFFHLLTHALFKALLFMCAGSIIHSVKDTQDIRFLGsmVQGMPFTCVAMNVANLSLCGVPFLSG 362
Cdd:PRK12664 241 IIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGG--LFKMSLEAMCCIIAILNMGAFPGTAG 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 363 FYSKDLILESLSMGVVNKFIYLIFFIATGLTMMytfrLTGYLMGFKYSFNSLSSLHDSNSSMVVG-----IILLLVVAVV 437
Cdd:PRK12664 319 FVSKSLITHSIDTAGLTLVLYKKLFLICSLLLF----ASVGLKFFWYAFISKSKSKPEAEKVYIGsklsmIILVLICVVL 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 938339407 438 GGCSLSWLIFPSPLVIILPSwmklltlMVTLVGGWLSYLIMKFDLMENAFKG 489
Cdd:PRK12664 395 GMFNSYLLFYNLPSFVYTLK-------SVALQLGLILGTTLLFICLRKLFLG 439
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
98-389 |
8.07e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 38.86 E-value: 8.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 98 LFVFSMWALIISPNLIMILLGWDGLGLVSYCLVIYYQN-VKSYNAGM----LTALSNR--IGDVALLMAITWMLNYGSWN 170
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGsGYSAEAGLkyfvLGALSSGlfLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 171 FVYYFDYCGSDYSMMVVMIMVLLAGMTKSAQIPFSSWLPAAM-AAPTPVSALVhsSTLVTAGVYllirfnKLLLVSGLSK 249
Cdd:MTH00196 81 LVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYeGAPTKTTALL--AIVPKLGIF------SILVSIGLNV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339407 250 FMLLIGSL-TMLMAGLGAMQEFDLKSIIALSTLSQLGLMMGILSLGGWMLAFFHLLTHALFkALLFMCAGSIIHSVKDTQ 328
Cdd:MTH00196 153 NILLIGGLfSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIY-IIMSICVFSIILALNVYK 231
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 938339407 329 D--IRFLGsMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESlsmGVVNKFiYLIFFIA 389
Cdd:MTH00196 232 NliIEFSG-LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLS---GVVYQY-YLIFLLA 289
|
|
| |
