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Conserved domains on  [gi|938339409|ref|YP_009171574|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Mirhipipteryx andensis]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 8-87 1.31e-15

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 65.56  E-value: 1.31e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339409   8 LLCILSMFVVGLFSFCSKMSNLLIMLMSLEYLVLSLFLLIMVYLNTTSYSSFFLIVFLVFSVCEGAIGLSIVVSMVRAYG 87
Cdd:MTH00162   4 LLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHG 83
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 8-87 1.31e-15

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 65.56  E-value: 1.31e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339409   8 LLCILSMFVVGLFSFCSKMSNLLIMLMSLEYLVLSLFLLIMVYLNTTSYSSFFLIVFLVFSVCEGAIGLSIVVSMVRAYG 87
Cdd:MTH00162   4 LLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHG 83
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 8-87 1.31e-15

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 65.56  E-value: 1.31e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339409   8 LLCILSMFVVGLFSFCSKMSNLLIMLMSLEYLVLSLFLLIMVYLNTTSYSSFFLIVFLVFSVCEGAIGLSIVVSMVRAYG 87
Cdd:MTH00162   4 LLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHG 83
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 8-87 4.79e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 43.81  E-value: 4.79e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339409   8 LLCILSMFVVGLFSFCSKMSNLLIMLMSLEYLVLSLFLLIMVYLNTTSYSSFFLIVFLVFSVCEGAIGLSIVVSMVRAYG 87
Cdd:MTH00188   6 ILVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSLIRSHG 85
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 7-87 1.31e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 42.91  E-value: 1.31e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339409   7 VLLCILSMFVVGLFSFCSKMSNLLIMLMSLEYLVLSLFLLIMVYLNTTSYSSFFLIVFLVFSVCEGAIGLSIVVSMVRAY 86
Cdd:MTH00149   5 LLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLIRLH 84


                 .
gi 938339409  87 G 87
Cdd:MTH00149  85 G 85
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 12-87 1.87e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 37.23  E-value: 1.87e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 938339409  12 LSMFVVGLFSFCSKMSNLLIMLMSLEYLVLSLFLLIMVYLNTTSYSS--FFLIVFLVFSVCEGAIGLSIVVSMVRAYG 87
Cdd:MTH00181   6 ISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSmlMFGLILLTFSACEAVLGLSLLVATNRTHG 83
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 6-87 1.11e-03

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 35.21  E-value: 1.11e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339409   6 LVLLCILSMFVVGLFSFCSKMSNLLIMLMSLEYLVLSLFLLIMVYLNTTSYSSFFL--IVFLVFSVCEGAIGLSIVVSMV 83
Cdd:MTH00125   3 PTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPmpIILLTFSACEAGTGLALLVATT 82


                 ....
gi 938339409  84 RAYG 87
Cdd:MTH00125  83 RTHG 86
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 13-87 2.46e-03

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 34.17  E-value: 2.46e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 938339409  13 SMFVVGLFSFCSKMSNLLIMLMSLEYLVLSLFL---LIMVYLNTTSYSSFFLIVfLVFSVCEGAIGLSIVVSMVRAYG 87
Cdd:MTH00126  10 SAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIalsLWALQLESTSFSAAPMLL-LAFSACEASAGLALLVATARTHG 86
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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