|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
21-592 |
0e+00 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 964.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 21 YPTMKTKTAVKMAFLTTLIPLTTFIHLDIESIITNLNWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSS 100
Cdd:MTH00004 31 NSPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMAS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 101 DPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLA 180
Cdd:MTH00004 111 DPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLA 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 181 MNTNTWELQQMFTTTSsMTLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTN 260
Cdd:MTH00004 191 MTLNTWEIQQLFSPTQ-TPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNN 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 261 STALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNL 340
Cdd:MTH00004 270 QTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 341 NNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSFTAAYSLRITAFV 420
Cdd:MTH00004 350 NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLV 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 421 QTGLPRYYPTMLLNENNPEIINPITRLAAGSIAAGLIISLNITPLKTPPTTMPTHIKVTALVMTILGLLLALELITMTNK 500
Cdd:MTH00004 430 QTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPMTMPTTTKLAALIVTILGILLALELSNMTTT 509
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 501 MTP-KPSNIHNLSNLLMHFNTLTHRSFPMANLKFNQNIATHLTDLSWYENIGPKGLTKSQITPITFISSSQKGLIKTYMT 579
Cdd:MTH00004 510 LTPpKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLT 589
|
570
....*....|...
gi 953245175 580 SFILSIMLLMITM 592
Cdd:MTH00004 590 SFALTILLLLLLT 602
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
22-593 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 920.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 22 PTMKTKTAVKMAFLTTLIPLTTFIHLDIESIITNLNWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSD 101
Cdd:MTH00137 36 ALTHVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHAD 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 102 PHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAM 181
Cdd:MTH00137 116 PNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWMAT 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 182 NTNTWELQQMFTTTSSMTLLPLLG-LILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTN 260
Cdd:MTH00137 196 NLNSWEIQQIFALSKDFDLTLPLLgLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENN 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 261 STALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNL 340
Cdd:MTH00137 276 QTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 341 NNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSFTAAYSLRITAFV 420
Cdd:MTH00137 356 NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFV 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 421 QTGLPRYYPTMLLNENNPEIINPITRLAAGSIAAGLIISLNITPLKTPPTTMPTHIKVTALVMTILGLLLALELITMTNK 500
Cdd:MTH00137 436 SMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTPVMTMPPLLKLAALIVTILGLLIALELASLTNK 515
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 501 ---MTPKPSnIHNLSNLLMHFNTLTHRSFPMANLKFNQNIATHLTDLSWYENIGPKGLTKSQITPITFISSSQKGLIKTY 577
Cdd:MTH00137 516 qfkPTPTLP-PHHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTWLEKTGPKGIASLQLPLITTTSNIQQGMIKTY 594
|
570
....*....|....*.
gi 953245175 578 MTSFILSIMLLMITML 593
Cdd:MTH00137 595 LTLFLLTLALATLLLL 610
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
27-592 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 854.92 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 27 KTAVKMAFLTTLIPLTTFIHLDIESIITNLNWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITK 106
Cdd:MTH00108 37 KTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINR 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 107 FFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTW 186
Cdd:MTH00108 117 FFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSW 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 187 ELQQMFTTTSSMTLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTALST 266
Cdd:MTH00108 197 DLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 267 CLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNNEQDI 346
Cdd:MTH00108 277 TLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDI 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 347 RKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSFTAAYSLRITAFVQTGLPR 426
Cdd:MTH00108 357 RKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPR 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 427 YYPTMLLNENNPEIINPITRLAAGSIAAGLIISLNITPLKTPPTTMPTHIKVTALVMTILGLLLALELITMTNKMTPK-P 505
Cdd:MTH00108 437 FPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQMTMPLYLKLTALAVTILGFILALELNLLTNNLKFKyP 516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 506 SNIHNLSNLLMHFNTLTHRSFPMANLKFNQNIATHLTDLSWYENIGPKGLTKSQITPITFIsSSQKGLIKTYMTSFILSI 585
Cdd:MTH00108 517 SNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEKILPKTISLIQMKASTTI-SNQKGLIKLYFLSFLITL 595
|
....*..
gi 953245175 586 MLLMITM 592
Cdd:MTH00108 596 TLSLLLF 602
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
21-592 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 845.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 21 YPTMKTKTAVKMAFLTTLIPLTTFIHLDIESIITNLNWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSS 100
Cdd:MTH00066 29 NFHTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHS 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 101 DPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLA 180
Cdd:MTH00066 109 DPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLA 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 181 MNTNTWELQQMFTTTSSMTLLPLLGLIlAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTN 260
Cdd:MTH00066 189 MNTNSWELQQIFLLNDNSTLPLLGLIL-AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENN 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 261 STALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNL 340
Cdd:MTH00066 268 QTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 341 NNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSFTAAYSLRITAFV 420
Cdd:MTH00066 348 NDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFS 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 421 QTGLPRYYPTMLLNENNPEIINPITRLAAGSIAAGLIISLNITPLKTPPTTMPTHIKVTALVMTILGLLLALELITMTNK 500
Cdd:MTH00066 428 SMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILTMPTFMKLAALLVTLLGLLIALDLAKITSK 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 501 MTPKPsNIHNLSNLLMHFNTLTHRSFPMANLKFNQNIATHLTDLSWYENIGPKGLTKSQITPITFISSSQKGLIKTYMTS 580
Cdd:MTH00066 508 TTPKT-KMHSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTL 586
|
570
....*....|..
gi 953245175 581 FILSIMLLMITM 592
Cdd:MTH00066 587 FLITLLLMLILL 598
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
23-593 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 699.01 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 23 TMKTKTAVKMAFLTTLIPLTTFIHLDIESIITNLNWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDP 102
Cdd:MTH00211 28 KLHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 103 HITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMN 182
Cdd:MTH00211 108 NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLN 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 183 TNTWELQQMFTTTSSMTLLPLLGLIlAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNST 262
Cdd:MTH00211 188 LNSWEISQLFILNLDLTLFLLGLLL-AAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQL 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 263 ALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNN 342
Cdd:MTH00211 267 ILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNN 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 343 EQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSFTAAYSLRITAFVQT 422
Cdd:MTH00211 347 EQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLG 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 423 GLPRYYPTMLLNENNPEIINPITRLAAGSIAAGLIISLNITPLKTPPTTMPTHIKVTALVMTILGLLLALELitMTNKMT 502
Cdd:MTH00211 427 GYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILSLPFLLKLMPLLVTIVGLLLGLEL--VNLTHK 504
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 503 PKPSNIHNLSNLLMHFNTLTHRSFPMANLKFNQNIATHLTDLSWYENIGPKGLTKSQITPITFISSSQKGLIKTYMTSFI 582
Cdd:MTH00211 505 QLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLL 584
|
570
....*....|.
gi 953245175 583 LSIMLLMITML 593
Cdd:MTH00211 585 LSLLLILLLFL 595
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
38-593 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 582.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 38 LIPLTTFIHLDIESIITNL-NWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFFKYLLIFLV 116
Cdd:MTH00208 70 LINLLIWILLGCPNINISLsNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 117 AMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTWELQQMFTTTS 196
Cdd:MTH00208 150 NMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSLNN 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 197 SMTLLPLLG---LILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTALSTCLCLGAI 273
Cdd:MTH00208 230 SNSFLINILlfgILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSL 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 274 TTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLH 353
Cdd:MTH00208 310 TALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLS 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 354 KSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSFTAAYSLRITAFVQTGLPRYYPTMLL 433
Cdd:MTH00208 390 FLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPI 469
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 434 NENNPEIINPITRLAAGSIAAGLIISLNITPLktPPTTMPTHIKVTALVMTILGLLLALELITMTNkMTPKPSNIHNLSN 513
Cdd:MTH00208 470 SEENPNLTNPLLRLAIGTIISGWFFSNFVFNL--PPLTLPLILKSLPLIVTIIGAAFSFSFLLSLS-SNPINSNFFSFLS 546
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 514 LLMHFNTLTHRSFPMANLKFNQNIATHLTDLSWYENIGPKGLTKSQITPITFISSSQKGLIKTYMTSFILSIMLLMITML 593
Cdd:MTH00208 547 NQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILTLSL 626
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
33-485 |
1.86e-135 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 408.00 E-value: 1.86e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 33 AFLTTLIPLTTFIH--------LDIESIITNLNWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHI 104
Cdd:COG1009 31 GWLAALAPLAAFVLslllfpavLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 105 TKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTN 184
Cdd:COG1009 111 ARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAG 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 185 TWELQQMFT-----TTSSMTLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTT 259
Cdd:COG1009 191 TLNFSELLAaaptiLSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFAL 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 260 NSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHN 339
Cdd:COG1009 271 SPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHA 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 340 LnNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSF-TAAYSLRITA 418
Cdd:COG1009 351 T-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAFlTAFYSFRLFF 429
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 953245175 419 FVQTGLPRYYPTMLLNENNPEIINPITRLAAGSIAAGLIISLNITPLKTPPTTMPTH--------IKVTALVMTI 485
Cdd:COG1009 430 LVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLLEGLLAPAAVLGGElhlahgllLNALPLLLSL 504
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
33-485 |
5.59e-123 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 376.42 E-value: 5.59e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 33 AFLTTLIPLTTFIHLDIESI-ITNLNWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFFKYL 111
Cdd:PRK06590 42 SALLSLVVFFDFLLGGGRAFsQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 112 LIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTWELQ-- 189
Cdd:PRK06590 122 NLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDev 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 190 -----QMFTTTSSMTLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTAL 264
Cdd:PRK06590 202 faaapQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEAL 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 265 STCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNNEQ 344
Cdd:PRK06590 282 LFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQ 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 345 DIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIEtmnTSYLNAWALL--LTLIATSFTAAYSLRITAFVQT 422
Cdd:PRK06590 362 DIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILE---AAFANGHINLfvAGLVGAFLTAFYSFRLIFLVFH 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 423 GLPRYY--------PTMLLnennpeiinPITRLAAGSIAAGLII------SLNITP---LKTPPTTMPTHIKVTALVMTI 485
Cdd:PRK06590 439 GKEKEKihhphespAVMTL---------PLIVLAVLSVFAGALIvppflgVLPLTTelaHGEAEHHLPVWVALLPLVVAL 509
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
29-467 |
3.60e-117 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 360.83 E-value: 3.60e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 29 AVKMAFLTTLIPLTTFIHLDIESIITN--LNWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITK 106
Cdd:TIGR01974 36 SVGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 107 FFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTW 186
Cdd:TIGR01974 116 FFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 187 ELQQMFTTTS----SMTLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNST 262
Cdd:TIGR01974 196 NFQEVFALAPgaffSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPT 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 263 ALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNN 342
Cdd:TIGR01974 276 ALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHH 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 343 EQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSFTAAYSLRITAFVQT 422
Cdd:TIGR01974 356 EQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFH 435
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 953245175 423 GLPRYYPTMLLNENNPEIINPITRLAAGSIAAGLIISLNITPLKT 467
Cdd:TIGR01974 436 GKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKG 480
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
42-589 |
1.34e-114 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 354.38 E-value: 1.34e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 42 TTFIHLDIesiitnLNWSHTSTFNINMSFKFDqystMFVPIALYVTWSILEFTHW----YMSSDPHITKFFKYLLIFLVA 117
Cdd:MTH00020 54 SSTTYIKL------WRWLDSDLLTVYFGLQFD----GLVAIMLLVVTTVSTLVHIfstaYMRGDPHIPRFMSYLSLFTFL 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 118 MMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTWELQQMF----T 193
Cdd:MTH00020 124 MVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFnmvvS 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 194 TTSSMTLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTALSTCLCLGAI 273
Cdd:MTH00020 204 APSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSL 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 274 TTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLH 353
Cdd:MTH00020 284 TVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLI 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 354 KSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSFTAAYSLRIT--AFVQTGLPRYYPTM 431
Cdd:MTH00020 364 SFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIylTFLSNTNLKKAVFF 443
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 432 LLNENNPEIINPITRLAAGSIAAGLIISLNITPLK-TPPTTMPTHIKVTALVMTILGLLLALELITMTNKMTPKPSNIHN 510
Cdd:MTH00020 444 HLHEGDWNLLLPLGILALGSIFVGYLAKEMIWSFQiTLPPIVPLSIKLLPVFLSLGGIGLVIILYFYSSKTFRVPFSFIG 523
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 511 LSNLLM-----HFNTLTHRSFPMANLKFNQNIATHLTDLSWYENIGPKGLTKSQITPITFISSSQKGLIKTYMTSFILSI 585
Cdd:MTH00020 524 RNSYTFlgsawQFNYILNYFLIKKIWKGGHLISYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIGV 603
|
....
gi 953245175 586 MLLM 589
Cdd:MTH00020 604 AIFI 607
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
58-590 |
6.42e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 339.68 E-value: 6.42e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 58 WSHTSTFNINMSFKFDQY-STMFVPI----ALYVTWSIlefthWYMSSDPHITKFFKYLLIFLVAMMILVTANNMFQFFI 132
Cdd:MTH00210 64 WFDSELLTTYFGLQFDSLtSTMLIVItsvsALVHIYST-----GYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFI 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 133 GWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTWElqqmFTTTSSMTLLPLLGLIL---- 208
Cdd:MTH00210 139 GWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLE----FSTISSLLVTNINKESLtiic 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 209 -----AATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTALSTCLCLGAITTLFTAFCAL 283
Cdd:MTH00210 215 lllfiGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGV 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 284 TQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLHKSLPITSSCL 363
Cdd:MTH00210 295 VQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMI 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 364 TIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSFTAAYSLRITAFVQTGLPRYYPTMLLN--ENNPEII 441
Cdd:MTH00210 375 LIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGvhESSWNIT 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 442 NPITRLAAGSIAAG-----LIISLNITPLktppttMPTHIKVTALVMTILGLLLALELITMTNKMTPKPSN--------- 507
Cdd:MTH00210 455 FPLLLLAFGSIFVGylgkeVVLSNVIPPI------VPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRgvsirlyhv 528
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 508 IHNLSNLLMHFNTLTHRSFPMANLKFNQNIATHLTDLSWYENIGPKGLTKSQITPITFISSSQKGLIKTYMTSFILSIML 587
Cdd:MTH00210 529 IYTFLNSAWQFNYVINHFIVKNIWKFGHLITYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALIMIIFTTL 608
|
...
gi 953245175 588 LMI 590
Cdd:MTH00210 609 FIS 611
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
62-593 |
1.44e-104 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 327.10 E-value: 1.44e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 62 STFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMS 141
Cdd:MTH00165 42 NSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVS 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 142 FLLIGWWRGRTEANSSALQAIIyNRMGDIGLILSMSWLaMNTNTWELQQM--FTTTSSMTLLPLLGLILAATGKSAQFGL 219
Cdd:MTH00165 122 YCLVIYYQNKKSYNAGMLTALS-NRIGDVAILLSIAWM-MNFGSWNFIFYldFMKNSFEMLLIGLLIMLAAMTKSAQIPF 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 220 HPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTtNSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQ 299
Cdd:MTH00165 200 SSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQ 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 300 LGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGF 379
Cdd:MTH00165 279 LGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGF 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 380 YSKDIIIETMNTSYLNAWALLLTLIATSFTAAYSLRITAFVQTGLPRYYPTMLLNENNPEIINPITRLAAGSIAAGLIIS 459
Cdd:MTH00165 359 YSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLS 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 460 LNITPLKTPPtTMPTHIKVTALVMTILGLLLALELITMTNKMTPKPSNIHNLSNLL--MHF-NTLTHRSFPMANLKFNQN 536
Cdd:MTH00165 439 WLIFPEPYMI-CLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKNYKLSSFLgsMWFmPFLSTYGISYYPLNLGSL 517
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 953245175 537 IaTHLTDLSWYENIGPKGLTKSQITPITFISSSQKGLIKTYMTSFILSIMLLMITML 593
Cdd:MTH00165 518 S-LKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
38-590 |
2.36e-102 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 321.02 E-value: 2.36e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 38 LIPLTTFIHLDIESIITNLNWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFFKYLLIFLVA 117
Cdd:MTH00151 18 LFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 118 MMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGrTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNtWELQQMFTTTSS 197
Cdd:MTH00151 98 MNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQN-KKSLSAGMLTALTNRIGDVLILLSIALLVLLGH-WSILSMWDFKLS 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 198 MTLLPLLGLilAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTALSTCLCLGAITTLF 277
Cdd:MTH00151 176 GWLGLLLVL--AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLM 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 278 TAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLHKSLP 357
Cdd:MTH00151 254 AGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLP 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 358 ITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSFTAAYSLRITAFVQTGLPRYYPTMLLNENN 437
Cdd:MTH00151 334 LTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDED 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 438 PEIINPITRLAAGSIAAGLIISlNITPLKTPPTTMPTHIKVtaLVMTILGLLLALELITMTNKMTPKPSNIHNLSNLLMH 517
Cdd:MTH00151 414 FYVSLPMLLLSLGALIGGKLLQ-SLFEGFSEEFFLPSYLKL--LIGFVILLGLFLSFGFWDSGFSSSKMVKLSFFFSSMW 490
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 953245175 518 F-NTLTHRSFPMANLKFNQNIATHLtDLSWYENIGPKGLTKSQitpITFISSSQKGLIKTYMTSFILSIMLLMI 590
Cdd:MTH00151 491 FlSPLSSQPLKSLSLKLSNSSMKSL-DMGWLEILGGQGVFKAN---KSFSVLNESWPVKWFNFFIGLILLLVLF 560
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
34-593 |
7.20e-96 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 304.38 E-value: 7.20e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 34 FLTTLIPLTTFIHLDIESIITNLNWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFFKYLLI 113
Cdd:MTH00207 17 MSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 114 FLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIyNRMGDIGLILSMSWlAMNTNTWELQQMFT 193
Cdd:MTH00207 97 FVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALT-NRIGDVMLLLSIGW-TLNQGHWSITNMWQ 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 194 TtsSMTLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTALSTCLCLGAI 273
Cdd:MTH00207 175 T--DMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASL 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 274 TTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLH 353
Cdd:MTH00207 253 TMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLT 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 354 KSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSFTAAYSLRITAFVQTGLPRYYPTMLL 433
Cdd:MTH00207 333 NQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHL 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 434 NENNPEIINPITRLAAGSIAAGLIISLNITPLKTPPtTMPTHIKVTALVMTILGLLLALELITMTNKMTPK--PSNIHNL 511
Cdd:MTH00207 413 EDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEP-ILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLliNNPLSHF 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 512 SNLLMHFNTLTHRSFPMANLKFNQNIATHLTDLSWYENIGPKGLTKSqitpITFISSSQKGLIKTYMTSFILSIMLLMIT 591
Cdd:MTH00207 492 ASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKM----FSRSSNNVMKLQKNIPNNYLMMSFVLLTI 567
|
..
gi 953245175 592 ML 593
Cdd:MTH00207 568 II 569
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
27-592 |
6.23e-94 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 299.25 E-value: 6.23e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 27 KTAVKMAFLTTLIPLTTFIHLDIESIITNLNWSHTS--TFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHI 104
Cdd:MTH00209 3 KMQMFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSlnSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 105 TKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGrTEANSSALQAIIYNRMGDIGLILSMSWlAMNTN 184
Cdd:MTH00209 83 KRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQN-SKSLSAGMLTALTNRVGDALLILSIAW-MLMHG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 185 TWelqQMFTTT--SSMTLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNST 262
Cdd:MTH00209 161 NW---NIFYLNfnSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPF 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 263 ALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNN 342
Cdd:MTH00209 238 FSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGH 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 343 EQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSFTAAYSLRITAFVQT 422
Cdd:MTH00209 318 SQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLW 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 423 GLPRYYPTMLLNENNPEIINPITRLAAGSIAAGLIISLNITPLKTPPtTMPTHIKVTALVMTIlgLLLALELITMTNKMT 502
Cdd:MTH00209 398 GPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSV-VLPWFLKLLPIMLIL--FGVLLMYMVLKKNFF 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 503 PKPSNIHNLSNLLMHFNT-LTHRSFPMANLKFNQNiATHLTDLSWYENIGPKGLTKSQITPITFISSSQKGLIKTYMTSF 581
Cdd:MTH00209 475 LIKGYKVNYFLSQMWFLPdLSSQPVNKFTMKLSKT-MLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFM 553
|
570
....*....|.
gi 953245175 582 ILSIMLLMITM 592
Cdd:MTH00209 554 MLILLGVILFM 564
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
58-416 |
4.48e-88 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 286.92 E-value: 4.48e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 58 WSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGV 137
Cdd:PRK07376 75 WASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELV 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 138 GIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTWELQQMFTTTSSMTLLPLLGLILAAT------ 211
Cdd:PRK07376 155 GMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLlcilvf 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 212 ----GKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTALSTCLCLGAITTLFTAFCALTQND 287
Cdd:PRK07376 235 lgpmAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQND 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 288 IKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNN--------EQDIRKMGGLHKSLPIT 359
Cdd:PRK07376 315 IKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPIT 394
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 953245175 360 SSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWalLLTLIATSFTAAYSLRI 416
Cdd:PRK07376 395 AITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALW--FVGFLTAGMTAFYMFRM 449
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
58-582 |
1.29e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 277.61 E-value: 1.29e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 58 WSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGV 137
Cdd:MTH00032 64 WIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGV 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 138 GIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLIL----------SMSWLAMNT---------NTWELQQMFTTTSSM 198
Cdd:MTH00032 144 GVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILgmvliyktigSLDFLTFNGgsvgsgimdRGYYGGGAYESPLAP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 199 TLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTALSTCLCLGAITTLFT 278
Cdd:MTH00032 224 FAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFA 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 279 AFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQ-LAFLHISMHAFFKAMLFLCSGSIIHNLN-NEQDIRKMGGLHKSL 356
Cdd:MTH00032 304 ATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSI 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 357 PITSSCLTIGSMALMGMPFMTGFYSKDIIIE------------------------------------TMNTSYLNAWALL 400
Cdd:MTH00032 384 PFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssllkiqgdigikkddrgsiggpEGYPSRGSAFAFW 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 401 LTLIATSFTAAYSLRITafvqtglpryYPTMLLNENNPE--------------IINPITRLAAGSIAAGLIIS----LNI 462
Cdd:MTH00032 464 LGTVAALLTAFYSIRLV----------YITFIISPNSPKeslisshinivdkrVLTVLSLLCFGAIFVGYLIQdiliGDI 533
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 463 TPLKTPP--TTMPTHIKVTALVMTILGLLLALELITMTNKMTPKPSNIHNLSNLL---MHFNTLTHRSFPMANLKFNQNI 537
Cdd:MTH00032 534 EHPIVPPliKVMPTLMGLFGMGLCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLggaWQGDHLINKLVAIPLFSFGHWG 613
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 953245175 538 ATHLTDLSWYENIGPKGLTKSQITPITFISSSQKGLIKTYMTSFI 582
Cdd:MTH00032 614 IYKTLDRGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVLL 658
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
97-416 |
3.64e-65 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 226.70 E-value: 3.64e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 97 YMSSDPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGL---I 173
Cdd:CHL00025 114 YMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLllgI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 174 LSMSWLamnTNTWELQQMFTTTSSMTLLPLLGLILA----------ATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMV 243
Cdd:CHL00025 194 LGFYWI---TGSFEFRDLFEIFNNLIYNNEVNLLFAtlcafllflgPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 244 VAGIFLLIRVHPILTTNSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHA 323
Cdd:CHL00025 271 AAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHA 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 324 FFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIetmNTSYLn 395
Cdd:CHL00025 351 YSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL---NDSWL- 426
|
330 340
....*....|....*....|....
gi 953245175 396 aWALLLTLIATS---FTAAYSLRI 416
Cdd:CHL00025 427 -YSPIFAIIAWStagLTAFYMFRI 449
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
33-405 |
1.56e-62 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 219.79 E-value: 1.56e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 33 AFLTTLIPLTTFIHL--------DIESIITNLNWshTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHI 104
Cdd:PRK12647 17 GWLLALLPLALFLYFlsfipeiaAGETVRGGYAW--VPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 105 TKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTN 184
Cdd:PRK12647 95 GRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTG 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 185 TWELQQMFT-----TTSSMTLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTT 259
Cdd:PRK12647 175 TYSLSELLAsgdviREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGG 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 260 NSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQP---QLAFLHISMHAFFKAMLFLCSGSI 336
Cdd:PRK12647 255 TPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSElaiKAAVLFLVAHSLYKGALFMVAGII 334
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 953245175 337 IHNLNNeQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETmnTSYLNAWALLLTLIA 405
Cdd:PRK12647 335 DHETGT-RDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEA--LLEAPLWSLILTVAA 400
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
56-474 |
1.63e-59 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 214.02 E-value: 1.63e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 56 LNWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSD-PHITKFFKYLLIFLVAMMILVTANNMFQFFIGW 134
Cdd:PRK12644 56 EVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFW 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 135 EGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTWELQQMFTT--TSSMTLLPLLGLILAATG 212
Cdd:PRK12644 136 ELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADppTGPAVSVAVVLILVGALS 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 213 KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTALSTCLCLGAITTLFTAFCALTQNDIKKII 292
Cdd:PRK12644 216 KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLIL 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 293 AFSTSSQLGLMMVTIGLNQPQLAFLHISM---HAFFKAMLFLCSGSIIHNlNNEQDIRKMGGLHKSLPITSSCLTIGSMA 369
Cdd:PRK12644 296 AYGTVSQLGFLTVLVGIGTRDAALAGLAMllaHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAAS 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 370 LMGMPFMTGFYSKDIIIETM----NTSYLNAWALLLTLIATSFTAAYSLRIT--AF-VQTGLPRYYPTMLLNENNPEIIN 442
Cdd:PRK12644 375 MAGLPPLLGFVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLwgAFaRKPGAFPSVAVTEMHRPSPLFLA 454
|
410 420 430
....*....|....*....|....*....|..
gi 953245175 443 PITRLAAGSIAAGLIISLNITPLKTPPTTMPT 474
Cdd:PRK12644 455 PPAVLAVLGLVLGLLPAPLDALLAPYADTVPA 486
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
33-426 |
4.36e-58 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 209.66 E-value: 4.36e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 33 AFLTTLIPLTTFIHL--------DIESIITNLNWshTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHI 104
Cdd:PRK12648 29 AWLAGLVALAALVLLallypavaAGEVIRAEIEW--LPALGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPV 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 105 TKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTN 184
Cdd:PRK12648 107 PRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVG 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 185 TWELQQMFTT-----TSSMTLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILT- 258
Cdd:PRK12648 187 SYDLDVVLAAgdlirAHPLYPPALVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAg 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 259 TN------STAlstclclGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQ---LAFLHISMHAFFKAML 329
Cdd:PRK12648 267 TEewfwivGGA-------GLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASL 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 330 FLCSGSIIHnlnnE---QDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIII-ETMNTSYLNAWALLLTLIA 405
Cdd:PRK12648 340 FMAAGIIDH----EtgtRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFaETLDTHLLGSLDWLLPVAA 415
|
410 420
....*....|....*....|....*....
gi 953245175 406 T---SFTAAYSLRITAFV-----QTGLPR 426
Cdd:PRK12648 416 TlagAFSVAYSLRFIHDVffgppPDDLPK 444
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
56-465 |
1.01e-56 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 206.05 E-value: 1.01e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 56 LNWSHT-------STFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFFKYLLIFLVAMMILVTANNMF 128
Cdd:PRK12650 54 LTWSVTwipdllgNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 129 QFFIGWEGVGIMSFLLIGwwRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTWELQQMFTTTS-----SMTLLPL 203
Cdd:PRK12650 134 VLFVAWELVSLASFFLIA--RSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaekpGLTTVVA 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 204 LGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTALSTCLCLGAITTLFTAFCAL 283
Cdd:PRK12650 212 VLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAV 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 284 TQNDIKKIIAFSTSSQLGLMMVTIGLNQP---QLAFLHISMHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLHKSLPITS 360
Cdd:PRK12650 292 QKTDLKKLTAYSTVSQLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQAGT-RDIRRLGSLWRRMPFTF 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 361 SCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATS----FTAAYSLRITAFVQTGLPRyyPTMLLNEN 436
Cdd:PRK12650 371 VSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAAlgavFTFAYSARLVLGAFVDGPR--DMSHVKEA 448
|
410 420
....*....|....*....|....*....
gi 953245175 437 NPEIINPITRLAAGSIAAGLIISLNITPL 465
Cdd:PRK12650 449 PVSLWLPAALPGALSLPLGLVPGLLDAPV 477
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
124-387 |
3.13e-56 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 191.37 E-value: 3.13e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 124 ANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTWELQQMFTTT-----SSM 198
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALtgglnSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 199 TLLPLLGLILAATGKSAQFGLHPWLPAA-MEGPTPVSALLhSSTMVVAGIFLLIRVHPILTTNS-TALSTCLCLGAITTL 276
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSpFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 277 FTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQP---QLAFLHISMHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLH 353
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270
....*....|....*....|....*....|....
gi 953245175 354 KSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIE 387
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
66-475 |
1.30e-53 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 195.43 E-value: 1.30e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 66 INMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLI 145
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 146 GWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTWELQQMFTTTSSMTL--------LPLLGLILAATGKSAQF 217
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENikghplflITLILIFIGAAAKSAQG 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 218 GLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTS 297
Cdd:PRK12649 232 PFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTI 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 298 SQLGLMMVTIGL---NQPQLAF----LHISMHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLHKSLPITSSCLTIGSMAL 370
Cdd:PRK12649 312 SQLAYLMTMYGYttyHEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAAT-RDIRKLGGLRKEMPITFIVASIAALAM 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 371 MGMPFMTGFYSKDIIIET---MNTSYLNAWALLLTLIATS---FTAAYSLRITAFVQTGLPRyyptmllNENNPEIIN-- 442
Cdd:PRK12649 391 AGIPPLNGFLSKEMFYETsveMGALIGGPFTIIIPAVAVLggvFTFAYSIKLIDGIFLGERT-------HDHLPHHIHea 463
|
410 420 430
....*....|....*....|....*....|...
gi 953245175 443 PITRLAAGSIAAGLIISLNITPlktpptTMPTH 475
Cdd:PRK12649 464 PYVMLIPAAFLAGLVILFGLVP------SIPIH 490
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
56-426 |
3.14e-53 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 194.29 E-value: 3.14e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 56 LNWshTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWE 135
Cdd:TIGR00940 59 IDW--VPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWE 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 136 GVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTWELQQMFTT-----TSSMTLLPLLGLILAA 210
Cdd:TIGR00940 137 LTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASadairNSPLFGTAMVLVLLGA 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 211 TGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTALSTCLCLGAITTLFTAFCALTQNDIKK 290
Cdd:TIGR00940 217 FTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 291 IIAFSTSSQLGLMMVTIGLNQPQL----------------AFLHISMHAFFKAMLFLCSGSIIHNlNNEQDIRKMGGLHK 354
Cdd:TIGR00940 297 ILAFSTISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFH 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 355 SLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYL------NAWALL---LTLIATSFTAAYSLRITAFVQTGLP 425
Cdd:TIGR00940 376 IMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHLvnpfdtVTLGYLfpyVATVASVFTFVYSLRFIHGVFFGRP 455
|
.
gi 953245175 426 R 426
Cdd:TIGR00940 456 K 456
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
69-421 |
5.07e-53 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 186.89 E-value: 5.07e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 69 SFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWW 148
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 149 RGRtEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTW---ELQQMFTTTSSMTLLPLLGLILAATG-KSAQFGLHPWLP 224
Cdd:COG0651 151 GTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLnmaDLAARLAELDPGLLLAAFALLLVGFGiKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 225 AAM-EGPTPVSALLhSSTMVVAGIFLLIRVHPILTTNSTALST---CLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQL 300
Cdd:COG0651 230 DAYpAAPSPVSALL-SGLLTKVGVYAILRVLTLLFGADPALFLgtlLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 301 GLMMVTIGLNQPQL---AFLHISMHAFFKAMLFLCSGSIIHNLnNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMT 377
Cdd:COG0651 309 GYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 953245175 378 GFYSKDIIIETMNTSylNAWALLLTLIATSF-TAAYSLRITAFVQ 421
Cdd:COG0651 388 GFVSKWLLLQAALEA--GAWLLAAVLLLSSLlTLAYFVRIFGRAQ 430
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
62-416 |
7.69e-53 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 193.43 E-value: 7.69e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 62 STFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSD-PHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIM 140
Cdd:PRK12646 66 KTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRkDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVS 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 141 SFLLIGWWRGRTEANSSALQAIIYNRMGD----IGLILSMSWLAMNTNTWELQQMFTTTSS-MTLLPLLGLILAATGKSA 215
Cdd:PRK12646 146 SFLLISYWYNNGDSQFGAIQSFMITVFGGlallVGFIMLYIMTGTNNITEILGQADHIKNHgLFIPMIFMFLLGAFTKSA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 216 QFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFS 295
Cdd:PRK12646 226 QFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 296 TSSQLGLMMVTIGLN-----QPQLAF------------LHISMHAFFKAMLFLCSGSIIHNlNNEQDIRKMGGLHKSLPI 358
Cdd:PRK12646 306 TISQLGMIMAMVGIGggyaqHQQDAIasiyvfvlfaalFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPK 384
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 953245175 359 TSSCLTIGSMALMGMPFMTGFYSKDIIIETM-NTSYLNAWALLLT-------LIATSFTAAYSLRI 416
Cdd:PRK12646 385 MNLVMTIAALSMAGVPFLNGFLSKEMFLDALtQTGQLSQFSLISMiiivfigVIASIFTFTYALYM 450
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
107-432 |
6.74e-49 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 182.05 E-value: 6.74e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 107 FFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTW 186
Cdd:PRK12645 112 FYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 187 ELQQMFTTT-----SSMTLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNS 261
Cdd:PRK12645 192 SIREMIANAdeiqnSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQ 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 262 TALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQL----------------AFLHISMHAFF 325
Cdd:PRK12645 272 VWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATF 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 326 KAMLFLCSGSIIHNLNNeQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETM------NTSYLNAWAL 399
Cdd:PRK12645 352 KGSLFMIVGIVDHETGT-RDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMlnateaNLFSLDTWGV 430
|
330 340 350
....*....|....*....|....*....|....*.
gi 953245175 400 LLTLIA---TSFTAAYSLRItaFVQTGLPRYYPTML 432
Cdd:PRK12645 431 LFPVIAwvaSVFTFVYSIIF--IFKTFFGKYKPEQL 464
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
66-416 |
1.72e-47 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 173.95 E-value: 1.72e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 66 INMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLI 145
Cdd:MTH00095 37 LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 146 GWWrGRTEANSSALQAIIYNRMGDIgLILSMSWLAMNTNTWELQQMFTTTSSMtllplLGLILAATGKSAQFGLHPWLPA 225
Cdd:MTH00095 117 LFY-NNWDSNSGAMNTALTNRIGDF-FIFLFFSGFIFSSYYFFSFSFFSSSMI-----LMLLLTSFTKSAQFPFSSWLPK 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 226 AMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTtNSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMV 305
Cdd:MTH00095 190 AMSAPTPVSSLVHSSTLVTAGLILLMNFSYLIL-NMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSML 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 306 TIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDII 385
Cdd:MTH00095 269 TFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELI 348
|
330 340 350
....*....|....*....|....*....|.
gi 953245175 386 IETMNTSYLNAWALLLTLIATSFTAAYSLRI 416
Cdd:MTH00095 349 LELFFFNNYMIFFSLMFFFSVFLTFGYSYRL 379
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
106-414 |
5.83e-46 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 169.00 E-value: 5.83e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 106 KFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWrGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNT 185
Cdd:PRK06525 114 RYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYY-QSPKALRSALKALLITHIGSLGLYLAAATLFLQTGT 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 186 WELQQMFTTTSSMTLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVhpILTTNSTALS 265
Cdd:PRK06525 193 FALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGPIPHV 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 266 ---TCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLN--QPQLAF----LHISMHAFFKAMLFLCSGSI 336
Cdd:PRK06525 271 igyVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilGSRLALegsiAYIFNHAFAKSLFFLVAGAL 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 953245175 337 IHNLNNeQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSFTAAYSL 414
Cdd:PRK06525 351 SYSCGT-RLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVASF 427
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
97-414 |
9.30e-45 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 168.16 E-value: 9.30e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 97 YMSSDPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSM 176
Cdd:PRK07390 112 YLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGV 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 177 SWLAMNTNTWELQQMF----TTTSSMTLLPLLGLILAA--TGKSAQFGLHPWLPAAMEGPTPVSaLLHSSTMVVAGIFLL 250
Cdd:PRK07390 192 VALSPLAGTLNFSDLAawaaTANLDPLTATLLGLALIAgpTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 251 IRVHPILTTNSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLF 330
Cdd:PRK07390 271 IKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLF 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 331 LCSGSIIHNlNNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSkdiIIETMNTSYLNAWALLLTLIATSFTA 410
Cdd:PRK07390 351 MSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA---LLRLADGLWAVSPWLVGVLLLVNALT 426
|
....
gi 953245175 411 AYSL 414
Cdd:PRK07390 427 AFNL 430
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
412-592 |
1.91e-41 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 147.70 E-value: 1.91e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 412 YSLRITAFVQTGLPRYYPTMLLNENNPEIINPITRLAAGSIAAGLIISLNITPlKTPPTTMPTHIKVTALVMTILGLLLA 491
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFP-KPPMMTMPLYLKLLALLVTILGLLLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 492 LELITMTNKMTPKP--SNIHNLSNLLMHFNTLTHRSFPMANLKFNQNIATHLtDLSWYENIGPKGLTKSQITPITFISSS 569
Cdd:pfam06455 80 LELSNLSNKQLKKSlnFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQI-DQGWSEKFGPQGIAKTLMTLSKIIQNS 158
|
170 180
....*....|....*....|...
gi 953245175 570 QKGLIKTYMTSFILSIMLLMITM 592
Cdd:pfam06455 159 QKGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
88-337 |
7.26e-33 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 132.51 E-value: 7.26e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 88 WSILEFTHWYMSSDPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRM 167
Cdd:PRK08168 83 WVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRL 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 168 GDIGLILSMSWLAMNTNTWELQQMFT-----TTSSMTLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTM 242
Cdd:PRK08168 163 AELLLLAAAALAYLEVGSLSLSALWAhlaaqGASPSLQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVV 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 243 VVAGiFLLIRVHPILTTNSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMH 322
Cdd:PRK08168 243 NLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAH 321
|
250
....*....|....*
gi 953245175 323 AFFKAMLFLCSGSII 337
Cdd:PRK08168 322 SLYKAHAFLSASEAV 336
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
213-456 |
9.80e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 131.54 E-value: 9.80e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 213 KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRV-----HPILTTNSTALSTCLCLGAITTLFTAFCALTQND 287
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIyftvfGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDD 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 288 IKKIIAFSTSSQLGLMMVTIGLNQP---QLAFLHISMHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLHKSLPITSSCLT 364
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPlalAAGLLHLLHHALMKGALFLAAGAIEVTYGT-RRLSELSGLGRRMPLTAAAFA 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 365 IGSMALMGMPFMTGFYSKDIIIETMNtsYLNAWALLLTLIATSF-TAAYSLRITAFVQTGLPRYYPTMLLNENNPEIINP 443
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAV--EAGQWLVLAVLLASSLlALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAP 451
|
250
....*....|...
gi 953245175 444 ITRLAAGSIAAGL 456
Cdd:PRK08375 452 SLALALLSLLLGI 464
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
62-415 |
1.90e-30 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 124.81 E-value: 1.90e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 62 STFNINMSFKFDQYSTMFVPIALYVTWSILefthwyMSSDPHITK----FFKYLLIFLVAMMILVTANNMFQFFIGWEGV 137
Cdd:COG1008 70 PSLGISYHLGVDGISLPLVLLTALLTPLAI------LASWNEIKKrpklYYALLLLLEAGMIGVFLALDLFLFYVFWELM 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 138 GIMSFLLIGWWrGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNT--NTWELQQMFTTTSSMTL-LPLLGLILAATG-K 213
Cdd:COG1008 144 LIPMYFLIGIW-GGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAgaLTFDIAELAAAPLPLTAqLLLFLAFFIAFAvK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 214 SAQFGLHPWLP-AAMEGPTPVSALLhSSTMVVAGIFLLIRVH-PILTTNSTALSTCLC-LGAITTLFTAFCALTQNDIKK 290
Cdd:COG1008 223 VPMFPFHTWLPdAHVEAPTAGSVLL-AGVLLKMGGYGLLRFAlPLFPEASAYFAPLLAaLGVIGIIYGALVALAQTDLKR 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 291 IIAFSTSSQLGLmmVTIGLnqpqLAFLHISM---------HAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLHKSLPITSS 361
Cdd:COG1008 302 LIAYSSVSHMGF--VLLGI----FALNPLGLqgavlqmvsHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAA 374
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 953245175 362 CLTIGSMALMGMPFMTGFYSKDIIIetMNTSYLNAWALLLTLIATSFTAAYSLR 415
Cdd:COG1008 375 LFLLAALASLGLPGTSGFVGEFLVL--LGAFQVNPWLAILAALGLILTAAYLLW 426
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
73-416 |
2.19e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 122.00 E-value: 2.19e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 73 DQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRT 152
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 153 EANSSALQAIIYNRMGD------IGLI------LSMSWLAMNTNTwelqQMFTTTSSMTLLPLLGLILAA-------TGK 213
Cdd:PRK12667 161 DAVEAAIKYALIGAVGTtlyflaLAFLyatfgtLNMADLSAKIRG----LSFPLTGGLAGNPPLALGVALalalwafTIK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 214 SAQFGLHPWLPAAM-EGPTPVSALLhSSTMVVAGIFLLIRV--------HPILTTNSTALSTCLCLGAITTLFTAFCALT 284
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 285 QNDIKKIIAFSTSSQLGLMMVTIGLNQP---QLAFLHISMHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLHKSLPITSS 361
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAGT-RDIDELAGLGRKMPIASF 394
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 953245175 362 CLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLtLIATSFTAAYSLRI 416
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL-LIASAISLVGYFRA 448
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
113-382 |
7.27e-29 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 121.53 E-value: 7.27e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 113 IFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTWELQQMF 192
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 193 TTTSS--MTLLPLLGLILAATGKSAQFGLHPWLP----AAmegPTPVSALLhSSTMVVAGIFLLIRV------HPILTTN 260
Cdd:PRK06521 201 AAHLSpfWASLVFLLALFGFGAKAGLVPLHVWLPrahpAA---PSHVSALM-SGVMLKVAIYGILRVvfdllgAPGWWWG 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 261 STALStclcLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGL-------NQPQLAFL-------HISMHAFFK 326
Cdd:PRK06521 277 VLVLA----LGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAALaltaalyHLLNHALFK 352
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 953245175 327 AMLFLCSGSIIHNLnNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSK 382
Cdd:PRK06521 353 SLLFLGAGAVLHAT-GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSE 407
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
32-415 |
1.26e-27 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 116.90 E-value: 1.26e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 32 MAFLTTLIPLTTFIHLDIESIITNLNWSHTSTFNINMSFKFD-QYSTMFVPIALYVTWSI-LEFTHWYMSSDPHITKFFK 109
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDfDYVTFGVLLMLLICFYYsLLYTFHYFGGSYASFLLNK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 110 YLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWrgrteANSSALQA----IIYNRMGDIGLILSMSWlamntnt 185
Cdd:MTH00063 81 LIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFY-----DNFLSLRAsvvtLVSSRFGDVCLFLLIGL------- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 186 welqQMFTTTSSMTLLPLLGLILAAtgKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRvHPILTTNSTALS 265
Cdd:MTH00063 149 ----SCWGGSGSFLCCLFFFLIVFT--KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDYLLGFSWLSI 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 266 TCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNNEQD 345
Cdd:MTH00063 222 FFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQS 301
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 953245175 346 IR-----KMGGLhkSLPITSSCLTIGsmaLMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSFTAAYSLR 415
Cdd:MTH00063 302 SNcvyssILYGS--WNLFYLFLLVLG---LSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFR 371
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
29-428 |
3.87e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 115.58 E-value: 3.87e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 29 AVKMAFLTTLIPLTTFIHLDIESII---------TNLNWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMS 99
Cdd:PRK08376 36 AVLISFLTLIVALLVFYEVWNNGTIvyvlgaespTLTLPFGSGGFPIRIIWEVDLFGAFMALIATIVSFLAVLYSISYMK 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 100 SDPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWL 179
Cdd:PRK08376 116 HDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 180 AMNTNTWEL----QQMFTTTSSMTLLPLLGLILAATGKSAQFGLHPWLPAAM-EGPTPVSALLHSSTmvVAGIFLLIRVH 254
Cdd:PRK08376 196 YGQYGTLNMaylaVKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYpAAPSSISAMLLVIK--QAGLYALARVL 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 255 PILTTNSTALSTC----LCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIG-----LNQPQL----------A 315
Cdd:PRK08376 274 FSIYGPAINLATVgwviIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGvglaaLGDPAMasygeialagG 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 316 FLHISMHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETmnTSYLN 395
Cdd:PRK08376 354 IYHIVNHALYKALLFLTAGAVIYETGT-RNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYES--SALFN 430
|
410 420 430
....*....|....*....|....*....|....*
gi 953245175 396 AWALLLTLIATSFTAAYSLRI--TAFVQTGLPRYY 428
Cdd:PRK08376 431 PILGVIAMIGSVLTLASFVKVfhTAFFGPPSEKVM 465
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
113-421 |
7.53e-26 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 112.13 E-value: 7.53e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 113 IFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTWELQQMF 192
Cdd:PRK08667 119 LFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLG 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 193 TTTSSMTLLPLLGLILAATgKSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGIFLLIR-VHPILTTNSTALSTCLCL 270
Cdd:PRK08667 199 ASAGILSLVFLLLFLGFGI-KAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRfLMDVLSPELWWGVLILLA 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 271 GAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGL-------NQPQLAFL-------HISMHAFFKAMLFLCSGSI 336
Cdd:PRK08667 277 GSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAGSV 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 337 IHNLNNeQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALL---LTLIATSFTAAYS 413
Cdd:PRK08667 357 VHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVADPLIkilLFSVLAIFALTSA 435
|
....*...
gi 953245175 414 LRITAFVQ 421
Cdd:PRK08667 436 LAAACFVK 443
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
107-433 |
9.36e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 110.81 E-value: 9.36e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 107 FFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRgRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTw 186
Cdd:PRK07234 96 FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPR-TDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGT- 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 187 elqqmfTTTSSMTLLPLLGLILAATG---KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTA 263
Cdd:PRK07234 174 ------FAFSGLATADPEAFALIALGllvKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLI 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 264 LSTclcLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTiglnqPQLA-FLHISmHAFFKAMLFLCSGsIIHNLNN 342
Cdd:PRK07234 248 VRI---FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA-----PLVGgLYALA-HGLVKSTLFLCAG-ALPSRNF 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 343 EQDIRKMGGLHKSLPitsscLTIGSMALMGMPFMTGFYSKDIIIetmntSYLNAWALLLTLIATSFTAAYSLRI--TAFV 420
Cdd:PRK07234 318 TELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKVLTL-----KNLLPWQAIALNLAAVGTAASFWKFifLPFS 387
|
330
....*....|....*...
gi 953245175 421 QTG-----LPRYYPTMLL 433
Cdd:PRK07234 388 ADDedkkpLPGFWNAIAL 405
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
33-415 |
6.72e-25 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 108.37 E-value: 6.72e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 33 AFLTTLIPLTTFIHLDIESIITNLNW----SHT--STFNINMSFKFDQYSTMFV-------PIALYVTWSILEfthwyms 99
Cdd:PRK05846 35 ALIGTLLTLLLSLVLWIGFDSSNAGFqfveKHPwiPRFGISYHLGVDGISLLLVvltalltPLAVLASWEEIK------- 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 100 sdpHITKFFKYLLIFLVAMMILV-TANNMFQFFIGWEGVGIMSFLLIGWWrGRTEANSSALQAIIYNRMGDIGLILSMSW 178
Cdd:PRK05846 108 ---KRVKFYMAALLWLEGGVIGVfAALDLLLFYVFFEAMLIPMYFLIGVW-GGKNRIYAATKFFLYTLLGSLLMLVAIIY 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 179 L----AMNTNTWELQQMFTTTSSMTLLPLLGLI-LAATG-KSAQFGLHPWLP-AAMEGPTPVSALLhsstmvvAGIFL-- 249
Cdd:PRK05846 184 LvvvyYNATGTFDIADLLNLPLPPGVQYWLFLAfFIAFAvKMPMFPLHTWLPdAHVQAPTAGSVLL-------AGILLkm 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 250 ----LIR-VHPILTTNSTALSTCLC-LGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIG-LNQPQLA---FLHI 319
Cdd:PRK05846 257 gaygLLRfSLPLFPDASHEFAPIIItLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFaGNQLGIQgaiFQMI 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 320 SmHAFFKAMLFLCSGSIIHNLNNEqDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIetMNTSYLNAWAL 399
Cdd:PRK05846 337 S-HGLSSAALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL--LGSFQVNPVIA 412
|
410
....*....|....*.
gi 953245175 400 LLTLIATSFTAAYSLR 415
Cdd:PRK05846 413 FIATTGLILAAVYSLW 428
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
65-470 |
9.62e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 107.98 E-value: 9.62e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 65 NINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSD--PHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSF 142
Cdd:PRK06589 74 NYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 143 LLIGWwrGRTEANSSALQAIIYNRMGDIGLI----LSMSWLAMNTNTWELQQMFTTTSSMTLLPLLGLILaatGKSAQFG 218
Cdd:PRK06589 154 FLIGH--TRNNISLSGGYKYLKILMISALLLflpaVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGI---AKTAIFP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 219 LHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPIL-----TTNSTALSTCLCLGAITTLFTA-FCALTQNDIKKII 292
Cdd:PRK06589 229 VHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIfglsyLQRIFAEFNWLIFIPIVSIFYSsLKALKTDNIKKIL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 293 AFSTSSQLGLMMVTIGLNQPQ---LAFLHISMHAFFKAMLFLCSGSIIhNLNNEQDIRKMGGLHKSLPITSSCLTIGSMA 369
Cdd:PRK06589 309 AYSTISQLSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISSLS 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 370 LMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTL---IATSFTAAYSLRITAFVQtgLPRYYPTMLLNENNPEIINPITR 446
Cdd:PRK06589 388 LIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLvviASSILSALYLLKILSSIY--KPSLSENSFITKSLPYLMQISVI 465
|
410 420
....*....|....*....|....
gi 953245175 447 LAAGSIAAGLIISLNITPLKTPPT 470
Cdd:PRK06589 466 TCCCALTLFYFIQILIREFLAYIT 489
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
109-416 |
8.40e-24 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 104.85 E-value: 8.40e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 109 KYLLIFLVAMMI---LVTANNMFQFFIGWEGVGIMSFLLIGWWRGRtEANSSALQAIIYNRMGDIGLILSMSWLAMNTNT 185
Cdd:PRK08377 109 KYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAYNKTG-EAAEASMKYIVLGGIGSSFFLIGVALIYGATGT 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 186 WELQQMFTTTSSM----TLLPLLGLILAATGKSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGIFLLIRVHPILTTN 260
Cdd:PRK08377 188 LNMAHIAQLAGTIdptvAQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNA 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 261 ---STALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQP---QLAFLHISMHAFFKAMLFLCSG 334
Cdd:PRK08377 267 ngwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVG 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 335 SIIHNLNNEQdIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSK-DIIIETMNTSYLnaWALLLTLIATSFTAAYS 413
Cdd:PRK08377 347 YVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKfRIILAGLSAGYT--WPVALVLGASVVEAVYY 423
|
...
gi 953245175 414 LRI 416
Cdd:PRK08377 424 FRL 426
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
122-386 |
1.13e-23 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 105.36 E-value: 1.13e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 122 VTANNMFQFFIGWEGVGIMSFLLIgWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTWELQQMFTTTSSMTLL 201
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 202 pllglilAATG---KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHP---ILTTnstalstclcLGAITT 275
Cdd:PRK12668 189 -------ILIGfgvNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPgteLLIY----------IGAAMA 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 276 LFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQL---AFLHISMHAFFKAMLFLCSGSIIHNLNnEQDIRKMGGL 352
Cdd:PRK12668 252 VYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGL 330
|
250 260 270
....*....|....*....|....*....|....
gi 953245175 353 HKSLPITSSCLTIGSMALMGMPFMTGFYSKDIII 386
Cdd:PRK12668 331 YRSMPLTALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
217-420 |
6.62e-22 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 99.23 E-value: 6.62e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 217 FGLHPWLP-AAMEGPTPVSALLHSSTMVVAgIFLLIRVHPILTTNSTALST---CLCLGAITTLFTAFCALTQNDIKKII 292
Cdd:PRK06458 231 FPMHAWLPdAHSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAIGSDFPgrlLLIFGLLSVLVAAFFLLRQRDIKRLF 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 293 AFSTSSQLGLMMVTIGLNQPqLAF----LHISMHAFFKAMLFLCSGSIIHNLNnEQDIRKMGGLHKSLPITSSCLTIGSM 368
Cdd:PRK06458 310 AYSSIEHMGLIAFALGIGGP-LGIfaalLHMLNHSLTKSAIFFASGNVLQKYG-TRDINVIRGLLKVSPLTGWGLMLGAL 387
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 953245175 369 ALMGMP----FMTGFYskdIIIETMNTSYLNAWALLLTLIATSFtAAYSLRITAFV 420
Cdd:PRK06458 388 AIAGMPpfgvFISEFL---ILTAGLARGPLLIAILLLLLLTLAF-AALVRRVAGMV 439
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
26-388 |
2.28e-19 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 91.98 E-value: 2.28e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 26 TKTAVKMAFLTTLIPLTtFIHLDIESIITNLNWSHTSTF-NINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHI 104
Cdd:PRK08668 21 KKINEKIGVIGNALPLL-FLIKLYFTLKVGTGEKLTLFFgGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAY 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 105 TKFFkYLLIFLVAMMILvTANNMFQFFIGWEGVGIMSFLLIgwWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTN 184
Cdd:PRK08668 100 FNMF-ALMSLAGVLGVF-LANDLLTLYIFWEIMTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTG 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 185 TW---ELQQMFTTTSSMTLLPLLGLILAATG--KSAQFGLHPWLPAAM-EGPTPVSALLhSSTMVVAGIFLLIRVHPILT 258
Cdd:PRK08668 176 TFdfaDISQGLINDTSTGFALIVFLFLLAFGvaKAGIFPLHVWAPDAYsEAPQSFSAVL-SGQLSKLGAYGFLLVLYVLP 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 259 TNSTALS------------TCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQP---QLAFLHISMHA 323
Cdd:PRK08668 255 GTKLFSEfgtyrgvplfnyILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHA 334
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 953245175 324 FFKAMLFLCSGSIIHNlNNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIET 388
Cdd:PRK08668 335 LFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEA 398
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
51-416 |
2.59e-18 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 87.86 E-value: 2.59e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 51 SIITNLNWSHTSTFNiNMsFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFFKYLLIF-LVAMMILVTANNMFQ 129
Cdd:COG1007 49 LLLLALGGGTGTAFG-GM-FVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFaTLGMMLMASANDLLT 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 130 FFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIynrMGDIG---LILSMSWLAMNTNTWELQQMFTTTSSMTLLPLLGL 206
Cdd:COG1007 127 LFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFL---LGALSsgfLLYGISLLYGATGSLNLAGIAAALAAGGANSPLLL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 207 I-----LAATG-KSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGIFLLIRV-HPILTTNSTALSTCLCLGAITTLFT 278
Cdd:COG1007 204 LglvlvLAGLAfKLSAVPFHMWTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRLlVEAFPGLAADWQLLLAVLAVLSMTV 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 279 -AFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQP---QLAFLHISMHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLHK 354
Cdd:COG1007 283 gNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLAR 362
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 953245175 355 SLPITSSCLTIGSMALMGMPFMTGFYSK-DIIIETMNTSYLnaWALLLTLIATSFTAAYSLRI 416
Cdd:COG1007 363 RSPLLALAMTIFLLSLAGIPPTAGFFGKfYVFSAAVEAGLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
104-410 |
7.18e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 86.71 E-value: 7.18e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 104 ITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTeANSSALQAIIYNRMGDIGLILSMSWLAMNT 183
Cdd:PRK12662 109 IPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGATFYLIGIGFLYAIT 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 184 NTWELQQMFT-----TTSSMTLLPLLGLILAATGKSAQFGLHPWLPAAM-EGPTPVSALLhSSTMVVAGIFLLIRV-HPI 256
Cdd:PRK12662 188 GTLNMGDMFLiiqdlPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIvYDV 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 257 LTTNSTALS-----TCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQ---LAFLHISMHAFFKAM 328
Cdd:PRK12662 267 FKANFVFTTlpfnnVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSA 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 329 LFLCSGSIIHNLNNeQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSylNAWALLLTLIATSF 408
Cdd:PRK12662 347 LFMVSGSISYHFGT-TKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS--NAWIGLVVLLVGSG 423
|
..
gi 953245175 409 TA 410
Cdd:PRK12662 424 LS 425
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
103-381 |
2.78e-17 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 85.08 E-value: 2.78e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 103 HITKFFKYLLIFLVAMMILV-TANNMFQFFIGWEGVGIMSFLLIGWWRGRTEaNSSALQAIIYNRMGDIgLILsMSWLAM 181
Cdd:PRK12561 84 RKPRLFYFLMLVLYSAQIGVfLAQDLLLFFLMWELELVPVYLLISIWGGQKR-LYAATKFILYTALASI-FIL-VAGLAL 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 182 ----NTNTWELQQ--MFTTTSSMTLLPLLGLILAATGKSAQFGLHPWLPAAM-EGPTPVSallhsstMVVAGIFL----- 249
Cdd:PRK12561 161 alsgDTFTFDLAElgAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggy 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 250 -LIRVH-PILTTNSTALSTCL-CLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTI------GLNQpqlAFLHIS 320
Cdd:PRK12561 234 aLIRFNvQMLPDAHVYFAPALaILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIaaftdlGISG---AMLQMI 310
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 953245175 321 MHAFFKAMLFLCSGSI---IHNLNneqdIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYS 381
Cdd:PRK12561 311 SHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
196-415 |
1.07e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 82.88 E-value: 1.07e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 196 SSMTLLPLLGLILAATGKSAQFGLHPWLPAA-MEGPTPVSALLhSSTMVVAGIFLLIRVHPILTTN---STALSTCLCLG 271
Cdd:PRK08676 202 PSVLGASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSgaaEQFSNVLIGLG 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 272 AITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAF---LHISMHAFFKAMLFLCSGsIIHNLNNEQDIRK 348
Cdd:PRK08676 281 IFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDR 359
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 953245175 349 MGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSK-DIIIETMNTS-YLNAWALLLTLIATSFTAAYSLR 415
Cdd:PRK08676 360 IFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKfFILLQLGGISvWLVLAVLLLLLLAASSFAIFLLK 428
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
213-387 |
2.06e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 79.22 E-value: 2.06e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 213 KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTALS--TCLCLGAITTLFTAFCALTQNDIKK 290
Cdd:PRK07691 222 KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFThyLILILALLTIIFGVIGAVAYFDIKK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 291 IIAFSTSSQLGLMMVTIGLNQP---QLAFLHISMHAFFKAMLFLCSGSIIHnLNNEQDIRKMGGLHKSLPITSSCLTIGS 367
Cdd:PRK07691 302 IIIYNIMIAVGVILVGVAMMTEsgmIGAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAA 380
|
170 180
....*....|....*....|
gi 953245175 368 MALMGMPFMTGFYSKDIIIE 387
Cdd:PRK07691 381 LSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
82-341 |
3.82e-15 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 78.15 E-value: 3.82e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 82 IALYVT---WSILEFTHWYMSSDPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSA 158
Cdd:PRK08601 77 MAFFVLtlgFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNKGWKVAREAA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 159 LQAIIYNRMGDIGLILSMSWLAMNTNTWELQQMFTTTSSMTLLPLLGL------ILAATGKSAQFGLHPWLPAAMEGPTP 232
Cdd:PRK08601 157 KISGMLFLISWLALALAIVWLFIATGEWQLTSVLSNENLAQLGTWEKTginlllILAVMIPAAQWPFQRWLIESAVAPTP 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 233 VSALLHSStMVVAGIFLLIRVHPILtTNSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQP 312
Cdd:PRK08601 237 VSAIMHAG-LVNAGGIMLTRFSPLF-HDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGAY 314
|
250 260
....*....|....*....|....*....
gi 953245175 313 QLAFLHISMHAFFKAMLFLCSGSIIHNLN 341
Cdd:PRK08601 315 SAAIIHLILHGLFKATLFLQSGSAVPRFN 343
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
213-456 |
4.70e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 78.07 E-value: 4.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 213 KSAQFGLHpWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPIL-TTNSTALSTCLCL-GAITTLFTAFCALTQNDIKK 290
Cdd:PRK12663 220 KAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfPQERELLHPLLATmAAITMVIGALGALAYKDIRR 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 291 IIAFSTSSQLGLMMVTIGLNQPQ-----LAFLHISMHAffKAMLFLCSGSIIHnLNNEQDIRKMGGLHKSLPITSSCLTI 365
Cdd:PRK12663 299 IAGYQVISSIGFILLGLALGTPAgingaIFYLVHDMVV--KTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLI 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 366 GSMALMGMPFMTGFYSKDIIIETMNTSylNAWALLLTLIATSFTAAYSL-RI--TAF-----VQTGLPRYYPTMLlnenn 437
Cdd:PRK12663 376 LIFAIGGLPPFSGFWGKVLLVQGALDN--GAYILLALMLITSLITMYSLfRIffLAYwgdkdGEEVNFKPIPLYR----- 448
|
250
....*....|....*....
gi 953245175 438 peiINPITRLAAGSIAAGL 456
Cdd:PRK12663 449 ---KLPLSILAVVVIAMGI 464
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
99-414 |
1.39e-13 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 73.20 E-value: 1.39e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 99 SSDPHITK-FFKYLLIFLVAMMIL--VTANNMFQFFIGWEGVGIMSFLLIGWWRGrTEANSSALQAIIYNRMGDIGLILS 175
Cdd:PRK06473 98 SSDESIQRpRFYYSLLLLLNAGVSgaFLAQDLLLFFLFYELELIPLYLLIAIWGG-QRRGYAATKFLLYTAISGILILVS 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 176 ---MSWLAMNTNTWELQQMFTTTSSMTLLPLLGLILAATG-KSAQFGLHPWLP-AAMEGPTPVSALLhSSTMVVAGIFLL 250
Cdd:PRK06473 177 flgLVWLSGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGiKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGL 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 251 IR--VHPILTTNSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPqLAFLHISM----HAF 324
Cdd:PRK06473 256 LRfgVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATP-LSILAAVFqmisHGL 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 325 FKAMLFLCSGsIIHNLNNEQDIRKMGGL---HKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYlnAWALLL 401
Cdd:PRK06473 335 ISALLFLLVG-VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIF--PVQTLL 411
|
330
....*....|...
gi 953245175 402 TLIATSFTAAYSL 414
Cdd:PRK06473 412 CMIGTGLTAVYFL 424
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
219-388 |
2.14e-13 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 72.94 E-value: 2.14e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 219 LHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHpiLTTNSTAL---STCLCLGAITTLFTAFCALTQNDIKKIIAFS 295
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLS--LLGGNAPLwwgVALLVLGMITAFVGGLYALMEHNIQRLLAYH 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 296 TSSQLGLMMVTIG-------LNQPQLAFL-------HISMHAFFKAMLFLCSGSIIHNlNNEQDIRKMGGLHKSLPITSS 361
Cdd:PRK08042 277 TLENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISI 355
|
170 180
....*....|....*....|....*..
gi 953245175 362 CLTIGSMALMGMPFMTGFYSKDIIIET 388
Cdd:PRK08042 356 AMLVGLMAMAALPPLNGFAGEWVIYQS 382
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
213-414 |
2.30e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 72.69 E-value: 2.30e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 213 KSAQFGLHPWLPAAM-EGPTPVSA----LLhssTMVvaGIFLLIRVHPILTTNSTALSTCLCLGAITTLFTAFCALTQND 287
Cdd:PRK12665 222 KAAVFPLSFWLPDSYpTAPAPVTAvfagLL---TKV--GVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSD 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 288 IKKIIAFSTSSQLGLMMVTIGLNQPQ---LAFLHISMHAFFKAMLFLCSGsIIHNLNNEQDIRKMGGLHKSLPITSSCLT 364
Cdd:PRK12665 297 IKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFF 375
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 953245175 365 IGSMALMGMPFMTGFYSKDIIIE--TMNTSYLnAWALLLTLIATSFTAAYSL 414
Cdd:PRK12665 376 VPALNLGGIPPFSGFIGKVALLEagAEDGTWL-AWALVAGGVVTSLLTLYAV 426
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
99-416 |
2.80e-13 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 72.16 E-value: 2.80e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 99 SSDPHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIynrMGDIG---LILS 175
Cdd:PRK05777 97 LEDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFV---LGALAsgfLLYG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 176 MSWLAMNTNTWELQQMFTTTSSMTLLPLLGLI-----LAATG-KSAQFGLHPWLPAAMEG-PTPVSALLHSSTMvVAGIF 248
Cdd:PRK05777 174 MSLLYGATGSLSFAGIAKALADGSGNSLLLLFglvflLVGLAfKLSAVPFHMWTPDVYEGaPTPVTAFLATAPK-IAAFA 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 249 LLIRV-HPILTTNSTALSTCLCLGAI-TTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQP---QLAFLHISMHA 323
Cdd:PRK05777 253 VLLRLlVVAFGGLSEDWQQVLAIIAIaSMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAegySAVLFYLLAYL 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 324 FFKAMLFLCSGSIIHNLNNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIET-MNTSYLnaWALLLT 402
Cdd:PRK05777 333 FMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAaVEAGLW--WLAVIG 410
|
330
....*....|....
gi 953245175 403 LIATSFTAAYSLRI 416
Cdd:PRK05777 411 VLNSAIGAFYYLRV 424
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
68-379 |
8.49e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 67.64 E-value: 8.49e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 68 MSFKFDQYSTMFVPIALYVTWSILEFThwymssdphITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGW 147
Cdd:MTH00226 103 ISIYFIILTGFIVPCSILISWHSVKYL---------TKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 148 WRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTWELQQMFTTTS----SMTLLPLLGLILAATGKSAQFGLHPWL 223
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHvvseQTQKWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 224 PAA-MEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNSTALS-TCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLG 301
Cdd:MTH00226 254 PKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLApAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 302 LMMVT------IGLNQPQLAFLhisMHAFFKAMLFLCSgSIIHNLNNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPF 375
Cdd:MTH00226 334 LVSITlvthdiIGLTGSIFIML---AHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPP 409
|
....
gi 953245175 376 MTGF 379
Cdd:MTH00226 410 SGNF 413
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
27-468 |
8.79e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 67.40 E-value: 8.79e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 27 KTAVKMAFLTTLIPLTTFIHLDIES---IITNLNWSHTSTFNIN----------MSFKFDQYSTMFVPIALYVTWSilef 93
Cdd:MTH00204 30 KRALEWSLAILFSTLVLWGAFDGEGqfqFINLIEWIISPTLNFQwgplvfavdgVSLFFILLTTLLIPICILISWK---- 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 94 thwymsSDPHITKFFKYLLIFLVAMMILV-TANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGL 172
Cdd:MTH00204 106 ------SIKFLFKEFLLCLLFLEVLLIGVfSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFM 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 173 ILSMSWLAMNTNTWELQQMFTTT--SSMTLLPLLGLILAATGKSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVVAGIFL 249
Cdd:MTH00204 180 LLGIFQLYSITGTTDYQILLNIKlpLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGF 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 250 LIRVHPILTTNSTALS-TCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLmmVTIGLNQPQL-----AFLHISMHA 323
Cdd:MTH00204 260 LRFSWPLFPAASEYFApLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGL--VPLGLFTHTIeglvaAVFLMLAHG 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 324 FFKAMLFLCSgSIIHNLNNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMP----FMTGFYSkdiIIETMNTSYLnawAL 399
Cdd:MTH00204 338 FVSSALFIAV-TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPlscnFVGEFFS---LLAAFEYSLG---LG 410
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 953245175 400 LLTLIATSFTAAYSLRITAFVQTGLPRYYPTMLLNENNPEiINPITRLAAGSIAAGLIISLNITPLKTP 468
Cdd:MTH00204 411 VLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRE-LLAILPLIIAIFLLGIVPFIIIDLVKNS 478
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
110-464 |
2.71e-11 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 66.27 E-value: 2.71e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 110 YLLIFLVAMMI--LVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSaLQAIIYNRMGD---IGLILSMSWLAMNTN 184
Cdd:PRK07363 110 YSLILLINGGIagALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYAS-IKFLIYTAVSGllvLAAFLGIVWLSGSTS 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 185 tWELQQMFTTTSSMTLLPLLGlilaaTGKSAQFG-------LHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPIL 257
Cdd:PRK07363 189 -FDYDAISTQNLSLNTQLILL-----TGLLLGFGikiplvpLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQL 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 258 --TTNSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQL---AFLHISMHAFFKAMLFLC 332
Cdd:PRK07363 263 fpQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHL 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 333 SGsIIHNLNNEQDIRKMGGLH---KSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYlnAWALLLTLIATSFT 409
Cdd:PRK07363 343 VG-IVERKVGTRDLDVLNGLMnpiRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTF--PIPTLLCIVASGLT 419
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 953245175 410 AAYS---LRITAFVQTGLPR-YYPTMLLNENNPEIinpitrlaagsIAAGLIISLNITP 464
Cdd:PRK07363 420 AVYFvilLNRTCFGRLDNKLaYYPKVLWSEKIPAL-----------ILTALILFLGVQP 467
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
36-382 |
4.04e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 65.41 E-value: 4.04e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 36 TTLIPLTTFIHLDIESIITNLNWSHTSTFNINMSFKFDQYSTMF-VPIALYVTWSILEFTHWYMSSDPHITKFFKYLLIF 114
Cdd:CHL00049 41 IPWLYFISSTSLVMSITALLFQWREEPMISFSGNFQTNNFNEIFqFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTA 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 115 LVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWL-AMNTNTWELQQM-- 191
Cdd:CHL00049 121 TLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSWLyGLSGGEIELQEIvn 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 192 ----FTTTSSMTLLPLLGLILAATG-KSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGIFLLIR----VHPILTTNS 261
Cdd:CHL00049 201 glinTQMYNSPGISIALIFITVGIGfKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRifdiPFYFSSNEW 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 262 TALSTCLCLgaITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLA--------FLHISMH--AFFKAMLF- 330
Cdd:CHL00049 280 HLLLEILAI--LSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGyasmitymLFYIFMNlgTFACIVLFg 357
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 953245175 331 LCSGSiihnlnneQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSK 382
Cdd:CHL00049 358 LRTGT--------DNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
58-108 |
7.37e-11 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 57.44 E-value: 7.37e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 953245175 58 WSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFF 108
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
39-439 |
3.77e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 62.26 E-value: 3.77e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 39 IPLTTFIHLDIESIITNLNWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHIT-KFFKYLLIFLVA 117
Cdd:MTH00206 24 STTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRqRIYITLLIVLQL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 118 MMILV-TANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLA--MNTNTWELQQMFTT 194
Cdd:MTH00206 104 FLILFfSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQnsLGSLSLYILYFSKL 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 195 TSSMTLLPLLGLILAATGKSAQFGLHPWLPAA-MEGPTpvsallhSSTMVVAGIFL------LIRVHPILTTNSTALSTC 267
Cdd:MTH00206 184 TTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLklggygMMRIILILGPSTKLSSYF 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 268 LC-LGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLM------MVTIGLNQpqlAFLHISMHAFFKAMLFlCSGSIIHNL 340
Cdd:MTH00206 257 FIiLGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVtagilsGSPWGFKG---ALLLMIAHGLVSSALF-CLANLLYER 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 341 NNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIetMNTSYLNAWALLLTLIATSFTAAYSLRITAFV 420
Cdd:MTH00206 333 SHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLII--TSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMT 410
|
410
....*....|....*....
gi 953245175 421 QTGLPRYYPTMLLNENNPE 439
Cdd:MTH00206 411 QHGKTPNHLLSLSPSSTRE 429
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
180-389 |
3.13e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 59.07 E-value: 3.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 180 AMNTNTWELQQMFTTTSSMTLLPllglilAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIrvhpiLTT 259
Cdd:MTH00112 78 AWNTGQWDITQLTNPTSCTLLTL------ALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLL-----MTS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 260 NSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQpqlaflHISMHAFFKAMLFLCSGSIIHN 339
Cdd:MTH00112 147 NSLNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSP------KLTLLTFYIYILMTTPMFLTLN 220
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 953245175 340 LNNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETM 389
Cdd:MTH00112 221 TTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQEL 270
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
106-410 |
9.84e-09 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 58.18 E-value: 9.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 106 KFFKYLLIFLVAMMILVTA-NNMFQFFIGWEGVGIMSFLLIGWWRGRTEaNSSALQAIIYNRMGDIGLILSMswLAM--- 181
Cdd:PRK02546 115 KLFYFLMLAMYGGQIAVFAvQDMLLFFLAWELELIPVYLLLAIWGGKKR-QYAATKFILYTAGSSLFILLAA--LAMafy 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 182 -NTNTWELQQMFTTTSSMTLLPLLGL--ILAATGKSAQFGLHPWLPAAM-EGPTPVSALLhsstmvvAGIFL------LI 251
Cdd:PRK02546 192 gDTPTFDMTALAAKDFGLGFQLLCYAglLIAYGVKLPIVPLHTWLPDAHgEATAPVHMLL-------AGILLkmggyaLL 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 252 RVHPILTTNSTALSTCL--CLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQP---QLAFLHISMHAFFK 326
Cdd:PRK02546 265 RMNAGMLPDAHAQFAPLliVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDlgtSGAMLQMISHGLIG 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 327 AMLFLCSGSI---IHNLNNEQdirkMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSylNAWALLLTL 403
Cdd:PRK02546 345 ASLFFLVGATydrTHTLMLDE----MGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATS--DAYTLPFRV 418
|
....*..
gi 953245175 404 IATSFTA 410
Cdd:PRK02546 419 VVVFLAA 425
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
121-414 |
1.45e-08 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 57.26 E-value: 1.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 121 LVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEAnSSALQAIIYNRMGDIGL---ILSMSWLAMNTNTWELQQMFTTTSS 197
Cdd:CHL00011 128 LFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRL-YSATKFILYTAGGSIFLligVLGMGLYGSNEPTLNFETLANQSYP 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 198 MTLLPLLGL--ILAATGKSAQFGLHPWLPaamegPTPVSAllHSST-MVVAGIFL------LIRVHPILTTNSTAL--ST 266
Cdd:CHL00011 207 VALEILFYIgfLIAYAVKLPIIPLHTWLP-----DTHGEA--HYSTcMLLAGILLkmgaygLIRINMELLPHAHSIfsPW 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 267 CLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTI------GLNQpqlAFLHISMHAFFKAMLFLCSGSI---I 337
Cdd:CHL00011 280 LVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIgsitdtGLNG---AILQIISHGFIGAALFFLAGTSydrI 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 338 HNLNNEQdirkMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTS--YLNAWALLLTL---IATSFTAAY 412
Cdd:CHL00011 357 RLVYLDE----MGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITSqkYLLMPKILITFvmaIGMILTPIY 432
|
..
gi 953245175 413 SL 414
Cdd:CHL00011 433 LL 434
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
233-387 |
2.33e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 56.58 E-value: 2.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 233 VSALLHS-STMVVAGIFLLI-RVHPILTTNSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLN 310
Cdd:PRK06277 233 GSALLQTfSKFVLVALMLVIfKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALG 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 311 QP---QLAFLHISMHAFFKAMLFLCSGsIIHNLNNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIE 387
Cdd:PRK06277 313 TPlgiVAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
56-382 |
3.48e-08 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 56.21 E-value: 3.48e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 56 LNWSHTSTFNINMSFKFDQYSTMFVP-IALYVTWSILEFTHWYMSSDPHITKFFKYLLIFLVAMMILVTANNMFQFFIGW 134
Cdd:PRK02504 60 LQWDNPNPISFLGSFNADNLSIAFRAiIALSTLVTLLMSWRYVEQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISL 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 135 EGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWL----AMNTNTWELQQMFTTTSSMTLLPLLGLILAA 210
Cdd:PRK02504 140 ETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLyglsGGSTQLSAIALALITSPSLGLALALVFVIAG 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 211 TG-KSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGIFLLIRvhpILTTnstalstclCLGAITT----LFTAFC--- 281
Cdd:PRK02504 220 IAfKISAVPFHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIR---LLVT---------AFPSFDEqwklLFTALAils 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 282 -------ALTQNDIKKIIAFSTSSQLGLMMvtIGLNQPQ-----------LAFLHISMHAFFKAMLF-LCSGSiihnlnn 342
Cdd:PRK02504 287 mvlgnvvALAQTSMKRMLAYSSIGQAGFVM--IGLVAGTeagyasmvfylLAYLFMNLGAFACVILFsLRTGT------- 357
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 953245175 343 eQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSK 382
Cdd:PRK02504 358 -DQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
112-414 |
4.11e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 52.61 E-value: 4.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 112 LIFLVAMMILV-TANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTNTWELQQ 190
Cdd:MTH00068 99 LIILQLTLILAfSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLIL 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 191 MFTTTSSMTLLPLLGLILAATG-----KSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGIFL------LIRVHPILT 258
Cdd:MTH00068 179 LELMSPMQLMTYTNKIWWLACLlafmvKMPLYGLHLWLPKAhVEAPIAGS-------MILAAVLLklggygILRISILLT 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 259 TNSTALSTCLCLGAIT-TLFTAFCALTQNDIKKIIAFSTSSQLGLMmVTIGLNQPQLAF-----LHISmHAFFKAMLFlC 332
Cdd:MTH00068 252 PLSKELSYPFIILALWgVLMTSLICLRQTDLKSLIAYSSVSHMGLV-IAAALIQTPWSFsgaiiLMIS-HGLTSSALF-C 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 333 SGSIIHNLNNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETM-NTSYlnaWALLLTLIATSFTAA 411
Cdd:MTH00068 329 LANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLfNWSN---WTILITGLGTLITAA 405
|
...
gi 953245175 412 YSL 414
Cdd:MTH00068 406 YTL 408
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
102-417 |
5.08e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 51.89 E-value: 5.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 102 PHITKFFKYLLIFLvaMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIgLILSMSWLAM 181
Cdd:MTH00200 3 PLILPLFILSLGLG--TLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASAL-LLFGGLLNAW 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 182 NTNTWELQQMFTTTSSMtllpllGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILTTNS 261
Cdd:MTH00200 80 TSGQWGISEMLGPLSET------LILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNI 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 262 TalstcLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNqPQLAFLHISMHAFFKAMLFLcsgsiIHNLN 341
Cdd:MTH00200 154 L-----LLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLYVIITLTVFL-----LLNLL 222
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 953245175 342 NEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLtLIATSFTAAYSLRIT 417
Cdd:MTH00200 223 NSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATIL-LLGSLLSLFFYLRLS 297
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
268-395 |
1.46e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 50.88 E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 268 LCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQ-----LAFLHISMHAFFKAMLFLCSGSIIhNLNN 342
Cdd:PRK12664 205 LFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVI-NRTR 283
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 953245175 343 EQDIRKMGGLHKsLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLN 395
Cdd:PRK12664 284 KFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLT 335
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
22-414 |
1.53e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 50.72 E-value: 1.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 22 PTMKTKTAVKMAFLTTLIPLTTFIHLDIESI-ITNLNW-SHTSTFNINMSFKFDQYSTmfvPIALYVTW----SILEFTH 95
Cdd:MTH00127 7 PTLMLIPTTWLTPAKWLWTTTLAHSLLIALAsLTWLKNlSETGWSSLNLYMATDPLST---PLLVLTCWllplMILASQN 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 96 WYMSSDPHITKFFKYLLIFLVAMMILV-TANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLIL 174
Cdd:MTH00127 84 HTAPEPINRQRMYITLLTSLQIFLILAfGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLV 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 175 SMSWLAMNTNTWELQQMFTTTSSMTLLPLLGLILAAT-----GKSAQFGLHPWLPAA-MEGPTPVSALLhSSTMVVAGIF 248
Cdd:MTH00127 164 ALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCllaflVKMPLYGVHLWLPKAhVEAPIAGSMVL-AAVLLKLGGY 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 249 LLIRVHPILTTNSTALSTCLCLGAITTLF-TAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQP---QLAFLHISMHAF 324
Cdd:MTH00127 243 GMMRMMVMLDPLTKELSYPFIILALWGIImTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPwgfTGALILMIAHGL 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 325 FKAMLFlCSGSIIHNLNNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETM-NTSYlnaWALLLTL 403
Cdd:MTH00127 323 TSSALF-CLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLfNWSP---WTLALTG 398
|
410
....*....|.
gi 953245175 404 IATSFTAAYSL 414
Cdd:MTH00127 399 LGTLITAGYSL 409
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
93-336 |
2.01e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 50.56 E-value: 2.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 93 FTHWYMSSDPHITKFFKYLLIFLV-AMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRgrtEANSSALQAIIYNRMGDIG 171
Cdd:PRK06459 59 LASLYSIEYDHYGKWLSSLYILTIlGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTK---KNKRPAFVFMAFGELSTVL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 172 LILSMSWLAMNTNTWELQQMFTTTSSMTLLPLLGLILAATgksaQFGLHPWLPAAM-EGPTPVSALLhSSTMVVAGIFLL 250
Cdd:PRK06459 136 ILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMM----PFLVSEWLPIAHgNAPSNFSAIL-SATMTLMGVYGI 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 251 IRVhPILTTNSTALS---TCLCLGAITTLFTAFCALTQNDIKKIIAFSTS-------SQLGLMMVTIGLNQPQLAFLHIS 320
Cdd:PRK06459 211 LKM-TILTQTIPIGYfglTILAIGAFSILFGALYAYVSENVKGLLAFSTIenngailVALGLYMVTKQLITSIEHFSLIT 289
|
250 260
....*....|....*....|..
gi 953245175 321 M------HAFFKAMLFLCSGSI 336
Cdd:PRK06459 290 VilysfaHSVAKTGLFLSSGLQ 311
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
98-414 |
6.66e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 48.65 E-value: 6.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 98 MSSDPHITK-FFKYLLIFLVAMMILV-TANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILS 175
Cdd:MTH00124 84 LQHEPLQRKrTFLTTLILLQTFLILAfSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPLLIA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 176 MSWLAMNTNTWELQQMFTTTSSMTLLPLLGLILAAT-----GKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGIFL 249
Cdd:MTH00124 164 ILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLAClmafmVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAILL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 250 ------LIRVHPILTTNSTALST---CLCL-GAITTLFTafcALTQNDIKKIIAFSTSSQLGLMMVTIgLNQPQLAF--- 316
Cdd:MTH00124 237 klggygIIRITLLLPPLSNTLHYpflTLALwGALMTSLI---CLRQTDLKSLIAYSSVSHMGLVIAAT-MIQTPWSLsga 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 317 --LHISmHAFFKAMLFlCSGSIIHNLNNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETM-NTSY 393
Cdd:MTH00124 313 miLMIA-HGLTSSMLF-CLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLfNWSP 390
|
330 340
....*....|....*....|.
gi 953245175 394 LnawALLLTLIATSFTAAYSL 414
Cdd:MTH00124 391 T---TIILTGLATLITASYTL 408
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
53-307 |
1.66e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 47.67 E-value: 1.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 53 ITNLNWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSDPHITKFFKYLLIFLVAMMILVTANNMFQFFI 132
Cdd:MTH00205 36 SFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYI 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 133 GWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWL--AMNTNTWELQQMFTTTSSMTLLPLLGLILAA 210
Cdd:MTH00205 116 TFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLnsLNFSLSMFFNFPLNFSDFYLFLYWIFLMLAF 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 211 TGKSAQFGLHPWLPAA-MEGPTpvsallhSSTMVVAGIFL------LIRVHPIL-TTNSTALSTCLCLGAITTLFTAFCA 282
Cdd:MTH00205 196 LVKLPMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRITSMLyKLNSNFSELFFSISLWGGVMTGMIC 268
|
250 260
....*....|....*....|....*
gi 953245175 283 LTQNDIKKIIAFSTSSQLGLMMVTI 307
Cdd:MTH00205 269 LRQVDLKSLIAYSSVGHMGLMVVGV 293
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
106-307 |
3.34e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 46.69 E-value: 3.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 106 KFFKYLLIFLVAMMILV-TANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAMNTN 184
Cdd:MTH00163 87 NLFLFLILFLLIFLLLTfSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSG 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 185 TWELQqMFTTTSSMTLLPLLGLILAATGKSAQFGLHPWLPAA-MEGPTpvsallhSSTMVVAGIFL------LIRVHPIL 257
Cdd:MTH00163 167 SLSFF-LLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLLRVMSFF 238
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 953245175 258 TTNSTALS-TCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTI 307
Cdd:MTH00163 239 SKLGLKFNyIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGL 289
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
98-425 |
4.79e-05 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 46.12 E-value: 4.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 98 MSSDPHITK--FFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILS 175
Cdd:MTH00044 85 LSNNSPNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLIS 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 176 MSWLAMNTNT-----WELQQMFTTTSSMTLLPLLGLILAATGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGIFL 249
Cdd:MTH00044 165 LIAIYSSSSSlsiplSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-------MILAAILL 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 250 ------LIRVHPILTTNST-----ALSTCLCLGAittLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQP---QLA 315
Cdd:MTH00044 238 klggygLIRLINLFSLPSAnnisfILIVFCCWGA---LITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNwgiNGA 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 316 FLHISMHAFFKAMLFlCSGSIIHNLNNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPfmtgfYSKDIIIETMNTSYLN 395
Cdd:MTH00044 315 LILMIAHGLVSSALF-CLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLP-----PLPNLIGELLIISSII 388
|
330 340 350
....*....|....*....|....*....|...
gi 953245175 396 AWALLLTLI---ATSFTAAYSLRITAFVQTGLP 425
Cdd:MTH00044 389 SWSILSFPIiglATVFGAIYSLLIYQLTNSGSF 421
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
220-416 |
7.08e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 45.41 E-value: 7.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 220 HPWLPAAMEG-PTPVSALLhsSTMVVAGIFLlirvhpILTTNSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSS 298
Cdd:MTH00196 115 HMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLNVNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIG 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 299 QLGLMMVTIGLNqpQLAFLHIS-MHAFFKAMLFLCSGSIIHNLNNEQD-IRKMGGLHKSLPITSSCLTIGSMALMGMPFM 376
Cdd:MTH00196 187 HMGFVLWGIEIG--SFESIQASlVYLFIYIIMSICVFSIILALNVYKNlIIEFSGLSRRLPILAITLALTFLSIAGIPPL 264
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 953245175 377 TGFYSKDIIIET--MNTSYLNAwalLLTLIATSFTAAYSLRI 416
Cdd:MTH00196 265 VGFLGKWLILLSgvVYQYYLIF---LLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
180-408 |
1.54e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 44.14 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 180 AMNTNTWELQQMFTTTSSMTLLPllglilAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILtt 259
Cdd:MTH00070 78 AWFTGEWTIMNMQTPLPTIMLTI------ALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLL-- 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 260 NSTALSTclcLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNqPQLAFLHISMHAFFKAMLFLCSGSIihn 339
Cdd:MTH00070 150 NSNLLII---MGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFLMLMNL--- 222
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 953245175 340 lnNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETM---NTSYLNAWALLLTLIATSF 408
Cdd:MTH00070 223 --NSTNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQELtkqNLTTLATLMALSALLSLFF 292
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
78-309 |
3.97e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 43.12 E-value: 3.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 78 MFVPIALYVTWSILEFThwymssdphITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSS 157
Cdd:MTH00217 91 LLTPICILISWNSIKFL---------IKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 158 ALQAIIYNRMGDIGLILSMSWLAMNTNTWELQQM--FTTTSSMTLLPLLGLILAATGKSAQFGLHPWLPAA-MEGPTPVS 234
Cdd:MTH00217 162 SYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALccLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGS 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 235 ALLhsstmvvAGIFL------LIRVH-PILTTNSTALST-CLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLmmVT 306
Cdd:MTH00217 242 VIL-------AGVLLklggygFIRFSwPLLPEASEYFSPlIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGL--VT 312
|
...
gi 953245175 307 IGL 309
Cdd:MTH00217 313 LGI 315
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
22-311 |
4.61e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 42.81 E-value: 4.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 22 PTMKTKTAVKMAFLTTLIPLTtfihldieSIITNLNWSHTSTFNINMSFKFDQYSTMFVPIALYVTWSILEFTHWYMSSD 101
Cdd:MTH00014 15 PLIKYPWSWALTFSTLLLLSL--------FTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 102 PHITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMSWLAM 181
Cdd:MTH00014 87 KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFY 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 182 NTNTWELqQMFTTTSSMTLLPLLGLILAATG---KSAQFGLHPWLPAA-MEGPTpvsallhSSTMVVAGIFL------LI 251
Cdd:MTH00014 167 TNNSLSM-LMSSMEPPSIYLMNLWWLITILAfmvKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLL 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 953245175 252 RVHPILTTNSTALST-----CLCLGAITTLFtafcALTQNDIKKIIAFSTSSQLGLMMVTIGLNQ 311
Cdd:MTH00014 239 RMSSLFMHINKSLSApfssiSLVGAVITSLI----CIRQPDLKSLIAYSSVGHMGLMTAGIMSNT 299
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
217-408 |
1.50e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 41.02 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 217 FGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLirvhPILTTNSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFST 296
Cdd:MTH00144 101 FPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSS 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 297 SSQLGLMMVTIGLNQPQL---AFLHISMHAFFKAMLFLCSGSIIHNLNNEqdirkmgglhKSLPITSSCLTIGSMALMGM 373
Cdd:MTH00144 177 ISHTGWMLVAILHGSWLMwmyFLIYIVSSGFLFFSLWSGDSGSMKDLGSL----------KPSYKTGLSIISLLLSLGGL 246
|
170 180 190
....*....|....*....|....*....|....*
gi 953245175 374 PFMTGFYSKDIIIETMNTSylNAWALLLTLIATSF 408
Cdd:MTH00144 247 PPFLGFCSKLLVLISSMES--SPLLLILLLLLGSL 279
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
98-406 |
2.53e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 40.15 E-value: 2.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 98 MSSDPHITKFFKYLLIflvAMMILVTANNMFQFFIGWEgVGIMSFLLIGWWRGRTEANSSALQAIIYNRMGDIGLILSMS 177
Cdd:MTH00011 2 MSTFPTMFLFSSTMTL---GTLMALSSNNWLFLWMGME-LNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMT 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 178 wlamntntwelqQMFTTTSSMTLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIrvhpiL 257
Cdd:MTH00011 78 ------------MMWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILF-----F 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 258 TTNSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVtIGLNQPQLAFLHISMHAFFKAMLFlcsgsII 337
Cdd:MTH00011 141 FTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTM-ISVFSPSMAILYFMTYIIITTPLM-----LL 214
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 953245175 338 HNLNNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIAT 406
Cdd:MTH00011 215 FAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSL 283
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
180-388 |
2.97e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 40.30 E-value: 2.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 180 AMNTNTWELQQMFTTTSSMTLLPllglilAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVhpiltT 259
Cdd:MTH00041 78 AWLSGSWSINGPLNTLSSIIITL------ALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISI-----S 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 260 NSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNqPQLAFLHISMHAFFKAMLFLcsgsiIHN 339
Cdd:MTH00041 147 NLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYS-PNASIIMFLIYIIINTSIFL-----IGN 220
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 953245175 340 LNNEQDIRKMGGLHKSLPITSSCLTIGSMALMGMPFMTGFYSKDIIIET 388
Cdd:MTH00041 221 NFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYC 269
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
106-303 |
4.18e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 39.82 E-value: 4.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 106 KFFKYLLIFLVAMMILVTA---NNMFQFFIGWEGVGIMSFLLIGWWRGRTEAnssaLQAIIYNRMGDIG------LILSM 176
Cdd:MTH00150 53 KSSSFSLLVLLLCLILVLAfsvSSLLMFYFFFEASLIPTLLLILGWGYQPER----LQAGMYMMLYTVGaslpllLVILW 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 177 SWLAMNTNTWELQQMFTTTSSMTLLPLLGLILAATGKSAQFGLHPWLPAA-MEGPTpvsallhSSTMVVAGIFL------ 249
Cdd:MTH00150 129 MSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggyg 201
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 953245175 250 LIRVHPILTTNSTALST---CLCLGAitTLFTAFCALTQNDIKKIIAFSTSSQLGLM 303
Cdd:MTH00150 202 ILRMMMVFSLSSSSFSIfliSLSLWG--GVLTSLICLRQSDVKSLIAYSSVGHMSLV 256
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
217-414 |
8.05e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 38.73 E-value: 8.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 217 FGLHPWLPAA-MEGPTPVSALLhSSTMVVAGIFLLIRVhpILTTNSTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFS 295
Cdd:MTH00094 168 YFLHLWLPKAhVEAPTTASMLL-AGLLLKLGTAGFLRI--LGSLNFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYS 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245175 296 TSSQLG--LMMVTIGLNQPQLAFLHISM-HAFFKAMLFLCSGSIIHnLNNEQDIRKMGGLHKSLPITSSCLTIGSMALMG 372
Cdd:MTH00094 245 SVTHMSflLLSLVYMSMSGKLSGLMMMLaHGYTSTLMFYLIGEFYH-ISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSG 323
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 953245175 373 MPFMTGFYSKDIIIetMNTSYLNAWALLLTLIATSFTAAYSL 414
Cdd:MTH00094 324 VPPSLSFFSEFLII--SNSFMKNKFSFFFIFFYFLVSFYYSL 363
|
|
| |
