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Conserved domains on  [gi|1197511513|ref|YP_009368218|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Lepilemur wrightae]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 548.07  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513   1 MFFTNLLLLIIPIIMAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALL 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  81 IALIMWAPLPMPYPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 161 TLSNLTTTQEHLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTM 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1197511513 241 LFLGTLYKPDMPETYTTNFTTKALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPILMSYVPPQM 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 548.07  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513   1 MFFTNLLLLIIPIIMAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALL 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  81 IALIMWAPLPMPYPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 161 TLSNLTTTQEHLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTM 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1197511513 241 LFLGTLYKPDMPETYTTNFTTKALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPILMSYVPPQM 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
NADHdh pfam00146
NADH dehydrogenase;
15-303 1.37e-111

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 325.58  E-value: 1.37e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  15 MAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPMPYP 94
Cdd:pfam00146  11 LAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPG 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  95 LI--NLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQEHL 172
Cdd:pfam00146  91 LVlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGG 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 173 WLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGTLYKPdMP 252
Cdd:pfam00146 171 WFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGP-FP 249
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1197511513 253 ETYTTNFTTKALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMW 303
Cdd:pfam00146 250 LPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
15-299 1.69e-99

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 295.89  E-value: 1.69e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  15 MAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPM--P 92
Cdd:COG1005    24 LLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpG 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  93 YPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQE-H 171
Cdd:COG1005   104 LVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgG 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 172 LWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGTLYKPDM 251
Cdd:COG1005   184 LWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFP 263
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1197511513 252 PETYTTNFTTK-----ALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005   264 ILPLGGLPGILwfllkTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 548.07  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513   1 MFFTNLLLLIIPIIMAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALL 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  81 IALIMWAPLPMPYPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 161 TLSNLTTTQEHLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTM 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1197511513 241 LFLGTLYKPDMPETYTTNFTTKALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPILMSYVPPQM 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
15-318 2.59e-179

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 497.88  E-value: 2.59e-179
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  15 MAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPMPYP 94
Cdd:MTH00111   20 IAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFP 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQEHLWL 174
Cdd:MTH00111  100 LADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWL 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 175 IIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGTLYKPDMPET 254
Cdd:MTH00111  180 IFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLNLPPEL 259
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1197511513 255 YTTNFTTKALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPILMSYVPPQM 318
Cdd:MTH00111  260 FTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
15-317 3.86e-173

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 482.58  E-value: 3.86e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  15 MAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPMPYP 94
Cdd:MTH00071   20 LAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNN 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQEHLWL 174
Cdd:MTH00071  100 LSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWL 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 175 IIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGTLYKPDMPET 254
Cdd:MTH00071  180 IIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQPEL 259
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1197511513 255 YTTNFTTKALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPILMSYVPPQ 317
Cdd:MTH00071  260 STMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
15-318 8.50e-171

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 476.41  E-value: 8.50e-171
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  15 MAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPMPYP 94
Cdd:MTH00134   21 LAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYP 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQEHLWL 174
Cdd:MTH00134  101 VTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWL 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 175 IIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGTLYKPDMPET 254
Cdd:MTH00134  181 LLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLPEL 260
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1197511513 255 YTTNFTTKALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPILMSYVPPQM 318
Cdd:MTH00134  261 TTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
15-316 1.50e-141

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 401.98  E-value: 1.50e-141
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  15 MAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPMPYP 94
Cdd:MTH00218   17 LAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFS 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQEHLWL 174
Cdd:MTH00218   97 LINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWL 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 175 IIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGTLYKpdmpet 254
Cdd:MTH00218  177 LIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLT------ 250
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197511513 255 yTTNFTTKALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPILMSYVPP 316
Cdd:MTH00218  251 -TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
1-316 9.47e-136

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 387.79  E-value: 9.47e-136
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513   1 MFFTNLLLLIIPIIMAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALL 80
Cdd:MTH00040    5 LFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLF 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  81 IALIMWAPLPMPYPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSF 160
Cdd:MTH00040   85 LALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSF 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 161 TLSNLTTTQEHLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTM 240
Cdd:MTH00040  165 SLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVI 244
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511513 241 LFLG-TLYKPDMPETYTTNFTTKALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPILMSYVPP 316
Cdd:MTH00040  245 LFLGgGSPFNEIFPINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
15-313 2.86e-115

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 335.17  E-value: 2.86e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  15 MAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPMPYP 94
Cdd:MTH00195   17 LAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFG 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQEHLWL 174
Cdd:MTH00195   97 FSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWV 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 175 IIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGTlykpdmpeT 254
Cdd:MTH00195  177 ILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGG--------G 248
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1197511513 255 YTTNFTTKALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPILMSY 313
Cdd:MTH00195  249 GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
NADHdh pfam00146
NADH dehydrogenase;
15-303 1.37e-111

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 325.58  E-value: 1.37e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  15 MAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPMPYP 94
Cdd:pfam00146  11 LAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPG 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  95 LI--NLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQEHL 172
Cdd:pfam00146  91 LVlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGG 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 173 WLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGTLYKPdMP 252
Cdd:pfam00146 171 WFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGP-FP 249
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1197511513 253 ETYTTNFTTKALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMW 303
Cdd:pfam00146 250 LPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
1-311 5.48e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 319.02  E-value: 5.48e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513   1 MFFTNLLLLIIPIIMAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALL 80
Cdd:MTH00193    3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  81 IALIMWAPLPMPYPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSF 160
Cdd:MTH00193   83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSF 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 161 TLSNLTTTQEHLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTM 240
Cdd:MTH00193  163 NLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVL 242
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1197511513 241 LFLGTLYKPDMpetyttnFTTKALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPILM 311
Cdd:MTH00193  243 MFLGGDLLSLL-------FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
15-302 2.68e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 317.58  E-value: 2.68e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  15 MAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPMPYP 94
Cdd:MTH00143   16 LAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFS 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQEHLWL 174
Cdd:MTH00143   96 SSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWL 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 175 IIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGTLykpdMPET 254
Cdd:MTH00143  176 GFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGS----SVLF 251
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1197511513 255 YTTNFTTKALLLTTLFL--WIRASYPRFRYDQLMHLLWKNFLPLTLALCM 302
Cdd:MTH00143  252 LLGGVVFMFKVLFFAFLfiWVRASYPRFRYDLLMMLCWKSFLPFSLSILV 301
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
1-307 7.59e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 303.49  E-value: 7.59e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513   1 MFFTNLLLLIIPIIMAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALL 80
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  81 IALIMWAPLPMPYPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSF 160
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 161 TLSNLTTTQEHLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTM 240
Cdd:MTH00225  162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511513 241 LFLGTLYkpdmpETYTTNFTTKALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISL 307
Cdd:MTH00225  242 LFFGGFF-----VTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
15-316 1.95e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 303.19  E-value: 1.95e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  15 MAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPM--P 92
Cdd:MTH00054   17 ISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYgeG 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  93 YPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQEHL 172
Cdd:MTH00054   97 VVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNI 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 173 WLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGTLYKPDMP 252
Cdd:MTH00054  177 WFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVISGP 256
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511513 253 ETYTTNFTTK---ALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPILMSYVPP 316
Cdd:MTH00054  257 TSYFSNFVWFgikIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
15-299 1.69e-99

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 295.89  E-value: 1.69e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  15 MAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPM--P 92
Cdd:COG1005    24 LLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpG 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  93 YPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQE-H 171
Cdd:COG1005   104 LVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgG 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 172 LWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGTLYKPDM 251
Cdd:COG1005   184 LWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFP 263
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1197511513 252 PETYTTNFTTK-----ALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005   264 ILPLGGLPGILwfllkTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
15-316 1.82e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 290.48  E-value: 1.82e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  15 MAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPMPYP 94
Cdd:MTH00216   21 IAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYERG 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  95 LI--NLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQEH- 171
Cdd:MTH00216  101 VLisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQNNg 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 172 LWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGTLYKPDM 251
Cdd:MTH00216  181 IWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGWLSPIK 260
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1197511513 252 PETYTTNFTTK-ALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPILMSYVPP 316
Cdd:MTH00216  261 YFKGGAGWFGLkVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
18-303 2.24e-95

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 285.16  E-value: 2.24e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  18 AFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPM--PYPL 95
Cdd:PRK06076   28 AFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFgpELVI 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  96 INLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQEHLWLI 175
Cdd:PRK06076  108 ADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWNI 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 176 IPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGTLYKPDMPETY 255
Cdd:PRK06076  188 IPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLPPFPLGGG 267
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1197511513 256 TTNFTTKA---LLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMW 303
Cdd:PRK06076  268 IPGAIWFVlkvAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
2-311 2.13e-89

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 269.73  E-value: 2.13e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513   2 FFTNLLLLIIPIIMAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLI 81
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  82 ALIMWAPLPMPYPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFT 161
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 162 LSNLTTTQeHLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTML 241
Cdd:MTH00010  165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197511513 242 FLGTlykpdMPETYTTNFTTKALLLTTLFL--WIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPILM 311
Cdd:MTH00010  244 FTSF-----IPSIFISDLMLILKTVFLAFLfiWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
15-316 2.38e-83

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 255.33  E-value: 2.38e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  15 MAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPMPYP 94
Cdd:MTH00029   22 LSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMDQG 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  95 --LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQEHL 172
Cdd:MTH00029  102 vfLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSV 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 173 WLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGTLYKP--D 250
Cdd:MTH00029  182 WLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGWLSPldG 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 251 MPETYTTNFTTKALLLTTLFLWI--------------RASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPILMSYVPP 316
Cdd:MTH00029  262 IPTPPEAFSIFEQIASSKSSFWFftkssifilffiwsRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGFNGVPP 341
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
16-298 5.10e-62

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 198.58  E-value: 5.10e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  16 AMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPMPYPL 95
Cdd:MTH00090   12 AIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDF 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  96 INLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNltttQEHLWLI 175
Cdd:MTH00090   92 LSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS----SFSLSLF 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 176 IpswpLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGTLYkpdmpety 255
Cdd:MTH00090  168 V----IYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFSF-------- 235
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1197511513 256 ttnftTKALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:MTH00090  236 -----LMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
18-298 3.74e-50

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 168.18  E-value: 3.74e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  18 AFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPMPYPLIN 97
Cdd:MTH00058   19 AFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGSY 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  98 LNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQEHLWLIIP 177
Cdd:MTH00058   99 SSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLSVLLFP 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 178 swPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGtlykpdmpetyTT 257
Cdd:MTH00058  179 --LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFG-----------GG 245
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1197511513 258 NFTTKALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:MTH00058  246 FVSIMLLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
23-298 2.23e-41

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 147.02  E-value: 2.23e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  23 IERKILGYMQLRKGPNTVGPHGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALLIALIMWAPLPMPYPLI--NLNM 100
Cdd:CHL00032   50 LEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVlaDLSI 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 101 GLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQE-------HLW 173
Cdd:CHL00032  130 GVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSkygfwgwNLW 209
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 174 liipSWPLA-MMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLG--TLYKP- 249
Cdd:CHL00032  210 ----RQPIGfIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGgwNLSIPy 285
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1197511513 250 -DMPETYTTNFTTKALLLTTLFLW--------------IRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:CHL00032  286 iFIPELFEINKTGGVFGTTIGIFItlaktylflfisitTRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
19-303 4.73e-25

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 102.18  E-value: 4.73e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  19 FFTLIERKILGYMQLRKGPntvgphGLLQPFADAMKLFIKEPLQPLTSSTLLYItAPTLALLIALI--MWAPLPMPYPLI 96
Cdd:COG0650    20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWLFRA-APYVALAAMLLaaLLVPVLTTGPPL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513  97 NLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSNLTTTQEH---LW 173
Cdd:COG0650    93 SFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAAhgpLL 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511513 174 LIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTMLFLGtlykPDMPE 253
Cdd:COG0650   173 LSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLP----WGIAL 248
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1197511513 254 TYTTNFTTK---ALLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMW 303
Cdd:COG0650   249 TLLLALLLFllkLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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