|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 762.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 1 MLKLIIPTMALLVVIWCSNNSMLWINTTLYSLMISFTSLSLLNQTDNISKNFSSTFFSDQLSSPLLVLTMWLLPLMIVAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 81 QHHLNKESWTRKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 161 LVALVYMQKSMGSLNFLMMTLLFQELSISWSNNLLWLACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 241 YGMMRITMTLNPLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 321 LTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIGELFVTMATFSWSNVTIILIGLNI 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1236518669 401 LITALYSLYMLTTTQRGKSSYHIHTLSPSLTRENALMSMHMLPLACLTLNPKIIMGFNY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 621.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 1 MLKLIIPTMALLVVIWCSNNSMLWINTTLYSLMISFTSLSLLNQTDNISKNFSSTFFSDQLSSPLLVLTMWLLPLMIVAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 81 QHHLNKESWTRKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 161 LVALVYMQKSMGSLNFLMMTLLFQELSISWSNNLLWLACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 241 YGMMRITMTLNPLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 321 LTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIGELFVTMATFSWSNVTIILIGLNI 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1236518669 401 LITALYSLYMLTTTQRGKSSYHIHTLSPSLTRENALMSMHMLPLACLTLNPKIIMG 456
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISG 456
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 577.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 1 MLKLIIPTMALLVVIWCSNNSMLWINTTLYSLMISFTSLSLLNQTDNISKNFSSTFFSDQLSSPLLVLTMWLLPLMIVAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 81 QHHLNKESWTRKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 161 LVALVYMQKSMGSLNFLMMTLLFQELSISWSNNLLWLACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 241 YGMMRITMTLNPLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 321 LTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIGELFVTMATFSWSNVTIILIGLNI 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1236518669 401 LITALYSLYMLTTTQRGKSSYHIHTLSPSLTRENALMSMHMLPLACLTLNPKIIMG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
7.58e-173 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 492.93 E-value: 7.58e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 1 MLKLIIPTMALLVVIWCSNNSMLWINTTLYSLMISFTSLSLLNQTDNISKNFSSTFF-SDQLSSPLLVLTMWLLPLMIVA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMaTDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 80 SQHHLNKESWTRKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 160 LLVALVYMQKSMGSLNFLMMTLLFQELSISWSNNLLWLACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 240 GYGMMRITMTLNPLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 320 GLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIGELFVTMATFSWSNVTIILIGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1236518669 400 ILITALYSLYMLTTTQRGKSSYHIHTLSPSLTRENALMSMHMLPLACLTLNPKIIMG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
4.02e-163 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 467.88 E-value: 4.02e-163
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 3 KLIIPTMALLVVIWCSNNSMLWINTTLYSLMISFTSLSLLNQTDNISKNFSSTFFS-DQLSSPLLVLTMWLLPLMIVASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSyDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 82 HHLNKESWTRKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 162 VALVYMQKSMGSLNFLMMTLLFQElsiSWSNNLLWLACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 242 GMMRITMTLNPLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 322 TSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIGELFVTMATFSWSNVTIILIGLNIL 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1236518669 402 ITALYSLYMLTTTQRGKSSYHIHTLSPSLTRENALMSMHMLPLACLTLNPKII 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
5.44e-148 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 429.78 E-value: 5.44e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 1 MLKLIIPTMALLVVIWCSNNSMLWINTTLYSLMISFTSLSLL-NQTDNISKNFSSTFFSDQLSSPLLVLTMWLLPLMIVA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLnNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 80 SQHHLNKESWTRKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 160 LLVALVYMQKSMGSLNFLMMTLLFQELSISWSNNLLWLACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 240 GYGMMRITMTLN-PLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIA 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 319 HGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIGELFVTMATFSWSNVTIILIGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1236518669 399 NILITALYSLYMLTTTQRGKSSYHIHTLSPSLTRENALMSMHMLPLACLTLNPKIIM 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
38-457 |
8.48e-120 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 356.07 E-value: 8.48e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 38 SLSLLNQTDNISKNFSSTFFSDQLSSPLLVLTMWLLPLMIVASQHHLNKESWtrKKLYLSMLTSLQVILVMTFSASETIL 117
Cdd:MTH00150 2 SLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNK--SSSFSLLVLLLCLILVLAFSVSSLLM 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 118 FYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSISWsnnLLWL 197
Cdd:MTH00150 80 FYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 198 ACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTNYMAYPFIMLCMWGMIMTSSICL 277
Cdd:MTH00150 157 LVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 278 RQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMST 357
Cdd:MTH00150 237 RQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 358 WWLLASLTNLALPPSINLIGELFVTMATFSWSNVTIILIGLNILITALYSLYMLTTTQRGKSSYHIHTLSPSLTRENALM 437
Cdd:MTH00150 317 WWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLL 396
|
410 420
....*....|....*....|
gi 1236518669 438 SMHMLPLACLTLNPKIIMGF 457
Cdd:MTH00150 397 LLHWVPLLLLILKSDLLFMW 416
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
3.26e-115 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 345.60 E-value: 3.26e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 1 MLKLIIPTMALLVVIWCSNNsmlWINTTLYSLMISFTSLSLLNQTDNISkNFSSTFFSDQLSSPLLVLTMWLLPLMIVAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNS---WWLVQSLLFLLSFLFMLLFSLSFYFS-NISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 81 QHHLNKESWtrKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPL 160
Cdd:MTH00163 77 ESVYKKNNY--SNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 161 LVALVYMQKSMGSLNFLMMTLLFqelsisWSNNLLWLACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNFFG------SLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 241 YGMMRITMTLNPLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 321 LTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIGELFVTMATFSWSNVTIILIGLNI 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1236518669 401 LITALYSLYMLTTTQRGKSSYHIHTLSPSLTRENALMSMHMLPLACLTLNPKIIMGF 457
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
4-455 |
2.10e-108 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 328.09 E-value: 2.10e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 4 LIIPTMALLVVIWCSNNSMLWINTTLYSLMISFTSLSLLNQTDNISKNFSSTFFSDQLSSPLLVLTMWLLPLMIVASQHH 83
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 84 LNKESwtRKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPLLVA 163
Cdd:MTH00205 81 FKSNK--NSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 164 LVYMQKSMGSLNFLMMTLLFQELSISWsnnLLWLACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGM 243
Cdd:MTH00205 159 LFFLNSLNFSLSMFFNFPLNFSDFYLF---LYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 244 MRITMTLNPLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTS 323
Cdd:MTH00205 236 IRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 324 SMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIGELFVTMATFSWSNVTIILIGLNILIT 403
Cdd:MTH00205 316 SGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLS 395
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1236518669 404 ALYSLYMLTTTQRGKSSYHIHTLSPSLTRENALMSMHMLPLACLTLNPKIIM 455
Cdd:MTH00205 396 GAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
7.75e-101 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 308.98 E-value: 7.75e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 1 MLKLIIPTMALLVVIWCSNNSMLWINTTLYSLMISFTSLSLLNQTDNISkNFSSTFFSDQLSSPLLVLTMWLLPLMIVAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYS-MFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 81 QHHLNKESWTrkKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPL 160
Cdd:MTH00014 80 FKIFQNNKAP--KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 161 LVALVYMQKSMGSLNFLMMTLLFQELSISwsnNLLWLACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 241 YGMMRITMTLNPLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 321 LTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIGELFVTMATFSWSNVTIILIGLNI 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1236518669 401 LITALYSLYMLTTTQRGKSSYHIHTLSPSLTRENALMSMHMLPLACLTLNPKII 454
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
59-449 |
1.62e-82 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 262.71 E-value: 1.62e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 59 DQLSSPLLVLTMWLLPLMIVASQHHLNKeswtRKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGN 138
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 139 QtERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSISWSNnLLWLACIMAFMVKMPLYSLHLWLPK 218
Cdd:COG1008 157 E-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQL-LLFLAFFIAFAVKVPMFPFHTWLPD 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPL-TNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:COG1008 235 AHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 298 IVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIG 377
Cdd:COG1008 315 LLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1236518669 378 ELFVTMATFSWSNVTIILIGLNILITALYSLYMLTTTQRGKSSYHIHTLSPSLTRENALmsmhMLPLACLTL 449
Cdd:COG1008 395 EFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAV----LAPLAALIL 462
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
59-456 |
2.36e-75 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 243.69 E-value: 2.36e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 59 DQLSSPLLVLTMWLLPLMIVASQHHLNKeswtRKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGN 138
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 139 QTeRLNAGLYFLFYTLFGSLPLLVALVYMqKSMGSLNFLMMTLLFQELSISWsNNLLWLACIMAFMVKMPLYSLHLWLPK 218
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAILGL-YFLGGGTFDLLELLNLPLPFGV-QTWLFLAFFIAFAVKVPLFPLHTWLPD 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNP-LTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:TIGR01972 229 AHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 298 IVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIG 377
Cdd:TIGR01972 309 LLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 378 ELFVTMATFSWSNVTIILIGLNILITALYSLYMLTTTQRG-KSSYHIHTLSPSLTRENALMSMHMLPLACLTLNPKIIMG 456
Cdd:TIGR01972 389 EFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGeLSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLD 468
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
59-410 |
1.22e-72 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 237.41 E-value: 1.22e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 59 DQLSSPLLVLTMWLLPLMIVASQHhlnkESWTRKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGn 138
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLASWE----EIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 139 QTERLNAGLYFLFYTLFGSLPLLVALVYM----QKSMGSLNFLmmTLLFQELSISWSNnLLWLACIMAFMVKMPLYSLHL 214
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIA--DLLNLPLPPGVQY-WLFLAFFIAFAVKMPMFPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 215 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPL-TNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 294 MALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSI 373
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
330 340 350
....*....|....*....|....*....|....*..
gi 1236518669 374 NLIGELFVTMATFSWSNVTIILIGLNILITALYSLYM 410
Cdd:PRK05846 393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWL 429
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
36-448 |
6.16e-67 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 221.85 E-value: 6.16e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 36 FTSLSLLNQTDNISKNFSSTFFS-DQLSSPLLVLTMWLLPLMIVASQH---HLNKEswtrkklYLSMLTSLQVILVMTFS 111
Cdd:MTH00217 55 FQAIKKFEWIPGIEPVFGPVVFAvDGISIFFLILTALLTPICILISWNsikFLIKE-------FLLCLLVIEILLMGVFT 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 112 ASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFlmMTLLFQELSISWs 191
Cdd:MTH00217 128 ILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDY--QALCCLKIEKEL- 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 192 NNLLWLACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTNYMAYPFIM-LCMWGMI 270
Cdd:MTH00217 205 QYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQtLSLLAII 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 271 MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQT 350
Cdd:MTH00217 285 YGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVI 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 351 LLPLMSTWWLLASLTNLALPPSINLIGELFVTMATFSWSNVTIILIGLNILITALYSLYMLTTTQRGKSSYHIHtLSPSL 430
Cdd:MTH00217 365 TMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLY-FSRDL 443
|
410
....*....|....*...
gi 1236518669 431 TRENALMsmhMLPLACLT 448
Cdd:MTH00217 444 NRREFYV---LLPLVFLI 458
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
48-423 |
1.53e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 221.09 E-value: 1.53e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 48 ISKNFSSTFFS-DQLSSPLLVLTMWLLPLMIVASQH---HLNKEswtrkklYLSMLTSLQVILVMTFSASETILFYILFE 123
Cdd:MTH00204 70 LNFQWGPLVFAvDGVSLFFILLTTLLIPICILISWKsikFLFKE-------FLLCLLFLEVLLIGVFSVLDLLLFYILFE 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 124 ATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLmmTLLFQELSISwSNNLLWLACIMAF 203
Cdd:MTH00204 143 GILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQ--ILLNIKLPLS-IQKWLLVGFFLSL 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 204 MVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTNYMAYPFI-MLCMWGMIMTSSICLRQTDL 282
Cdd:MTH00204 220 AVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIvMLSVIAVIYGSLTTCRQVDF 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 283 KSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLA 362
Cdd:MTH00204 300 KRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVL 379
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1236518669 363 SLTNLALPPSINLIGELFVTMATFSWSNVTIILIGLNILITALYSLYMLTTTQRGKSSYHI 423
Cdd:MTH00204 380 SLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYL 440
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-389 |
7.88e-65 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 210.63 E-value: 7.88e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 112 ASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSISWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 192 NNLLWLACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTNYMAYPFIMLCMWGMIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 272 TSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANS-NYERIHSRTMIMARGLQT 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|....*....
gi 1236518669 351 LLPLMSTWWLLASLTNLALPPSINLIGELFVTMATFSWS 389
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAAS 279
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
56-447 |
5.71e-60 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 204.00 E-value: 5.71e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 56 FFSDQLSSPLLVLTMWLLPLMIVASQHHLNkesWTRKKLYLSMLTsLQVILVMTFSASETILFYILFEATLIPTLIIITR 135
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVK---YLTKSFLICMLI-LEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 136 WGNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSiSWSNNLLWLACIMAFMVKMPLYSLHLW 215
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVS-EQTQKWIFLGIFLAMAVKIPIFPFHIW 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 216 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPL-TNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:MTH00226 253 LPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHM 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 295 ALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSIN 374
Cdd:MTH00226 333 GLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGN 412
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1236518669 375 LIGELFVTMATFSWSNVTIILIGLNILITALYSLYMLTTTQRGKSSYHIhTLSPSLTRENALMSMHMLPLACL 447
Cdd:MTH00226 413 FIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLI-TFARDVNRREFYITASMVFFAFL 484
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-381 |
1.15e-44 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 162.89 E-value: 1.15e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 59 DQLSSPLLVLTMWLLPLMIVASQHHLNKeswtrKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGN 138
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFASWKVTRK-----PRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 139 QtERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSISWSNnLLWLACIMAFMVKMPLYSLHLWLPK 218
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALEL-LLYAGFLIAFGVKLPIFPLHTWLPD 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTN-YMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK12561 211 AHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHvYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 298 IVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIG 377
Cdd:PRK12561 291 LLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
....
gi 1236518669 378 ELFV 381
Cdd:PRK12561 371 ELTV 374
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
94-442 |
1.54e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 160.46 E-value: 1.54e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 94 LYLSMLtsLQVILVMTFSASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPLLVALVYmqksmgs 173
Cdd:MTH00094 65 LILSNL--LILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK------- 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 174 lNFLMMTLLFQELSISWsnnLLWLACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPL 253
Cdd:MTH00094 136 -NFFFFSLCYFDFFLSW---EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 254 TNYMaypFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSN 333
Cdd:MTH00094 212 YNNF---WIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEF 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 334 YERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIGELFVTMATFSWSNVTIILIGLNILITALYSLYMLTT 413
Cdd:MTH00094 289 YHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVS 368
|
330 340
....*....|....*....|....*....
gi 1236518669 414 TQRGKSSYHIHTLSPSLTRENALMSMHML 442
Cdd:MTH00094 369 SFMGKKFSNFNNFNVGLSLPLVFMMFNMF 397
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
59-411 |
7.54e-42 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 155.24 E-value: 7.54e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 59 DQLSSPLLVLTMWLLPLMIVASQhhlnkESWTRKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGN 138
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 139 QtERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSISwSNNLLWLACIMAFMVKMPLYSLHLWLPK 218
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTNYMAYPFimLCMWGMIMT---SSICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK06473 231 AHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVSVlygASCAIAQKDMKKMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 296 LVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGL---QTLLPLMSTWWLLASLTNLALPPS 372
Cdd:PRK06473 309 YILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGM 388
|
330 340 350
....*....|....*....|....*....|....*....
gi 1236518669 373 INLIGELFVTMATFSWSNVTIILIGLNILITALYSLYML 411
Cdd:PRK06473 389 VGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLV 427
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-387 |
2.78e-39 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 146.83 E-value: 2.78e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 52 FSSTFFSDQLSSPLLVLTMWLLPLMIVASQHHLNKESwtRKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLI 131
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYG 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 132 IITRWGNQtERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSISWSNnLLWLACIMAFMVKMPLYS 211
Cdd:COG0651 146 LVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLL-AAFALLLVGFGIKAALFP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 212 LHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNP--LTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYS 289
Cdd:COG0651 224 LHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 290 SVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLAL 369
Cdd:COG0651 304 SVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGL 383
|
330
....*....|....*...
gi 1236518669 370 PPSINLIGELFVTMATFS 387
Cdd:COG0651 384 PPLSGFVSKWLLLQAALE 401
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
58-385 |
4.38e-38 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 145.23 E-value: 4.38e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 58 SDQLSSPLLVLTMWLLPLMIVASqhhlnkesWT---RKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIIT 134
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAA--------WPvtfKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 135 RWGNQtERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSISWsNNLLWLACIMAFMVKMPLYSLHL 214
Cdd:PRK02546 157 IWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGF-QLLCYAGLLIAYGVKLPIVPLHT 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 215 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTN-YMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK02546 235 WLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHaQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISH 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 294 MALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSI 373
Cdd:PRK02546 315 MGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMS 394
|
330
....*....|....
gi 1236518669 374 NLIGEL--FVTMAT 385
Cdd:PRK02546 395 GFVAELmvFVGFAT 408
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
59-418 |
3.07e-35 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 136.77 E-value: 3.07e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 59 DQLSSPLLVLTMWLLPLMIVASQhhlnkESWTRKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGN 138
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 139 QtERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSISwSNNLLWLACIMAFMVKMPLYSLHLWLPK 218
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTNYMAYPfiMLCMWGMIMT---SSICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 296 LVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTL---LPLMSTWWLLASLTNLALPPS 372
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGL 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1236518669 373 INLIGELFVTMATFSWSNVTIILIGLNILITALYSLYMLTTTQRGK 418
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGR 434
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
110-381 |
1.21e-34 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 135.07 E-value: 1.21e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 110 FSASETILFYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLFGSLPLLVALVymqkSMGSLNFLMMTLLFQELSI- 188
Cdd:CHL00011 129 FSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVL----GMGLYGSNEPTLNFETLANq 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 189 SWSNNL---LWLACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTNYMAYPFIMLC 265
Cdd:CHL00011 204 SYPVALeilFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIV 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 266 -MWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIhsRTMIM 344
Cdd:CHL00011 284 gAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYL 361
|
250 260 270
....*....|....*....|....*....|....*....
gi 1236518669 345 AR--GLQTLLPLMSTWWLLASLTNLALPPSINLIGELFV 381
Cdd:CHL00011 362 DEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-449 |
2.53e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 105.44 E-value: 2.53e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 59 DQLSSPLLVLTMWLLPLMIVASQHHLNKESwtRKKLYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITRWGN 138
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHES--GPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 139 QTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSIS----------WSNNLLWLACIMAFMVKMP 208
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPltgglagnppLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 209 LYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMT-------LNPLTNYMAYPFIMLCMWGMIMTSSICLRQTD 281
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTifgispsLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 282 LKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLL 361
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 362 ASLTNLALPPSINLIGELFVTMATFSWSNVTIILIGLNILITALYS----LYMLTTTQRGKSSYHIHTLSPSltrenalM 437
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGyfraWYSLFFGKPKSGEEVEHKESPS-------M 471
|
410
....*....|..
gi 1236518669 438 SMHMLPLACLTL 449
Cdd:PRK12667 472 SVVILVLALAVL 483
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-387 |
5.95e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 98.03 E-value: 5.95e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 55 TFFSDQLSSPLLVLTMWLLPLMIVASQHHLNKESWTRKKLYLSMLTSLqviLVMTFSASetiLF--YILFEATLIPTLII 132
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYAIGYGEHRQTRFYALFLLLLAGL---LGALLTAD---LFnlFVFLEIMSLSSYAL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 133 ITRWGNQtERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQElsiswsNNLLWLA---CIMAFMVKMPL 209
Cdd:PRK08375 146 VAMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAE------NPTVVTAfgfVLLALALKAAV 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 210 YSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTNY----MAYPFIMLCMWGMIMTSSICLRQTDLKSL 285
Cdd:PRK08375 219 FPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRfalgLGWLLAVLALLSMLVGSLAALGQDDVKRV 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 286 IAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLT 365
Cdd:PRK08375 299 LAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLS 378
|
330 340
....*....|....*....|..
gi 1236518669 366 NLALPPSINLIGELFVTMATFS 387
Cdd:PRK08375 379 LIGVPPTSGFVSKWYLVVGAVE 400
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
4.90e-20 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 84.88 E-value: 4.90e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 1 MLKLIIPTMALLVVIWCSNNSMLWINTTLYSLMISFTSLSLLNQTDNISKNFSSTFFS-DQLSSPLLVLTMWLLPLMIVA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGiDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 1236518669 80 SQHHLNKESWTRKKLYLSMLTSLQVILVMT 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
21-381 |
1.39e-19 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 90.37 E-value: 1.39e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 21 SMLWINTTLYSLMISFTSLSLLNQTDNISKN-FSSTFFSDQLSSPLLVLTMWLLPLMIVASQHHLNKESwtRKKLYLSML 99
Cdd:MTH00062 5 SVGFFLGFLLLLLFCLLYSSGVGCCILVVNNvFNGLFIFDSLSFYLILLVLFLGLYSQVMFYNLLSGVS--RFFLFLSLI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 100 TSlqvilVMTFSASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMM 179
Cdd:MTH00062 83 FS-----ILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 180 tllfqELSISWSNNLLWLACIMaFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTNYMAY 259
Cdd:MTH00062 158 -----GSDDSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 260 PFIMLCMWGMIMTSSICLrqtDLKSLIAYSSVSHMaLVIVAILIQTPWSYVGATALM-IAHGLTSSMLFCLANSNYERIH 338
Cdd:MTH00062 232 FLCCLFSVFFLITACSEL---DGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFYEVSG 307
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1236518669 339 SRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIGELFV 381
Cdd:MTH00062 308 SRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFL 350
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-387 |
1.92e-17 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 84.60 E-value: 1.92e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 206 KMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTNYMAYPFIMLCMwGM--IMTSSICL-RQTDL 282
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIF-GLlsVLVAAFFLlRQRDI 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 283 KSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLA 362
Cdd:PRK06458 306 KRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLG 385
|
170 180
....*....|....*....|....*
gi 1236518669 363 SLTNLALPPSINLIGELFVTMATFS 387
Cdd:PRK06458 386 ALAIAGMPPFGVFISEFLILTAGLA 410
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
52-386 |
3.79e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 84.01 E-value: 3.79e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 52 FSSTFFSDQLSSPLLVLTMWLLPLMIVASQHHLNKESWTRKKLYLSMLTSLQVI-LVMTFSASETILFYILFEATLIPTL 130
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 131 IIITRWGNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSiswsnnLLWLACIMAFMVKMPLY 210
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILS------LVFLLLFLGFGIKAGII 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 211 SLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK08667 223 PFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 291 VSHMALVIVAILIQTPW-----------SYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWW 359
Cdd:PRK08667 303 IENIGIILMGIGLYVIFgvygldtlallALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALF 382
|
330 340
....*....|....*....|....*..
gi 1236518669 360 LLASLTNLALPPSINLIGELFVTMATF 386
Cdd:PRK08667 383 LVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
88-327 |
7.02e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 76.96 E-value: 7.02e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 88 SW-TRKKLYLSMLTSLQVILVM-TFSASETILFYILFEATLIPTLIIITRwGNQTERLNAGLYFLFyTLFGSLPLLVALV 165
Cdd:PRK08668 91 SEkTKNDAYFNMFALMSLAGVLgVFLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIF 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 166 YMQKSMGSLNFlmmTLLFQELSISWSNNLLWLAC--IMAFMV-KMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYG 242
Cdd:PRK08668 169 LIYAKTGTFDF---ADISQGLINDTSTGFALIVFlfLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYG 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 243 M---MRITMT---LNPLTNYM-----AYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVG 311
Cdd:PRK08668 246 FllvLYVLPGtklFSEFGTYRgvplfNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAG 325
|
250
....*....|....*.
gi 1236518669 312 ATALMIAHGLTSSMLF 327
Cdd:PRK08668 326 GLFHVFNHALFKGLFF 341
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
102-327 |
4.22e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 70.94 E-value: 4.22e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 102 LQVILVMTFSASETILFYILFE-ATLIPTLIIITRwgNQTERLNAGLYFLFYT------LFGSLPLLVALVYMQKSMGSL 174
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAElTTVFSAMLIAIL--SARENIDAALKYIFIAstamifAFIGLIFLFSLTRQALGTGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 175 NFLMMTLLFQELSISWSNnLLWLACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPlT 254
Cdd:PRK08676 189 NWTELAAHASLLSPSVLG-ASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQ-S 266
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1236518669 255 NYMAYPFIMLCMWGMIMTSSIC---LRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLF 327
Cdd:PRK08676 267 GAAEQFSNVLIGLGIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLF 342
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
95-371 |
1.02e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 70.46 E-value: 1.02e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 95 YLSMLTSLQVILVMTFsASETILFYILFEATLIPTLIIITRWGNQTErlNAGLYFLFYTLFGSLPLLVALVYMQKSMGSL 174
Cdd:PRK12650 113 YLLMTAFMAAMLLLVL-ADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 175 NFLMMTLlfqelSISWSNNLLWLACI-----MAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIT-- 247
Cdd:PRK12650 190 SLSGILH-----SDVWAEKPGLTTVVavliaVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSpv 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 248 MTLNPLTNYMaypFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLF 327
Cdd:PRK12650 265 FHDVAVWNWL---LIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLF 341
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1236518669 328 CLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK12650 342 MLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
145-371 |
1.05e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 66.84 E-value: 1.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 145 AGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMtlLFQELSISWSNNLLWLAcIMAFMVKMPLYSLHLWLPKAHVEAP 224
Cdd:PRK06521 165 AGFLYLLMAHAGALAILLAFGLLARESGSYDFAAM--RAAHLSPFWASLVFLLA-LFGFGAKAGLVPLHVWLPRAHPAAP 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 225 IAGSMVLAAVLLKLGGYGMMRITMTLnpLTNYMAYpfimlcmWGMIM-----TSSI-----CLRQTDLKSLIAYSSVSHM 294
Cdd:PRK06521 242 SHVSALMSGVMLKVAIYGILRVVFDL--LGAPGWW-------WGVLVlalgaISAVlgvlyALAEHDLKRLLAYSTIENI 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 295 ALVIVA-----ILIQTPWSYVGATALMIA------HGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLAS 363
Cdd:PRK06521 313 GIIFVGlglamVFIAYGMPLLAALALTAAlyhllnHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGC 392
|
....*...
gi 1236518669 364 LTNLALPP 371
Cdd:PRK06521 393 LAISALPP 400
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
200-387 |
2.56e-11 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 65.56 E-value: 2.56e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 200 IMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTNYMAYPFIMLCMWGM--IMTSSICL 277
Cdd:PRK08377 213 IFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLVIIMATLtvFFAELSAL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 278 RQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMST 357
Cdd:PRK08377 293 RQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTAL 372
|
170 180 190
....*....|....*....|....*....|
gi 1236518669 358 WWLLASLTNLALPPSINLIGELFVTMATFS 387
Cdd:PRK08377 373 ALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
94-370 |
2.98e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 65.55 E-value: 2.98e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 94 LYLSMLTSLQVILvmtfsASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGS 173
Cdd:PRK12646 116 LTLFMFSMIGIVL-----SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 174 LNflMMTLLFQELSIS---WSNNLLWLACIMAFmVKMPLYSLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITMT 249
Cdd:PRK12646 191 NN--ITEILGQADHIKnhgLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 250 LNpLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATAL-------------- 315
Cdd:PRK12646 267 LG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDAIasiyvfvlfaalfh 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1236518669 316 MIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALP 370
Cdd:PRK12646 346 LMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVP 400
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-379 |
3.08e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 65.37 E-value: 3.08e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 119 YILFEATLIPTLIIITRwGNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSiSWSNNLLWLA 198
Cdd:PRK12665 137 YVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP-SGTRTALFAV 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 199 CIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPlTNYMAYPFIMLCMWGMIMTSSICLR 278
Cdd:PRK12665 215 LLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALLTMVVGILGAIA 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 279 QTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTW 358
Cdd:PRK12665 294 QSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVL 373
|
250 260
....*....|....*....|..
gi 1236518669 359 WLLASLtNLA-LPPSINLIGEL 379
Cdd:PRK12665 374 FFVPAL-NLGgIPPFSGFIGKV 394
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
108-392 |
3.12e-11 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 65.00 E-value: 3.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 108 MTFSASETIL-FYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQEL 186
Cdd:PRK06525 127 AGLVYSSTLLgLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 187 SIswsnnLLWLACIMAFMVKMPLYSLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITMTLNPLTNYMAYPFIMLC 265
Cdd:PRK06525 206 KY-----LVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMA 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 266 MWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQ---TPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTM 342
Cdd:PRK06525 280 IVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLL 359
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1236518669 343 IMARGLQTLLPLMSTWWLLASLTNLALPPSINLIGELFVTMATFSWSNVT 392
Cdd:PRK06525 360 PRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEY 409
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-392 |
9.29e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 63.68 E-value: 9.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 47 NISKNFSSTFFSDQLSSPLLVLT--MWLLPLM-IVASQHHLNKESWTRKKLYLSMLTSLQVILVMTfsaSETILFYILFE 123
Cdd:PRK06589 70 MDFGNYSIGLHLEPLGLIFLLLIgfLWICALLyTPKYLAINNIDSSSRFLFFFNLTILIGVLIALS---SDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 124 ATLIPTLIIITrWGNQTERLNAGLYFLFYTLFGSLPL-LVALVYMQKSMGSLNFLMMTLLFQELSISWSNNLLWLacima 202
Cdd:PRK06589 147 LLTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYG----- 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 203 fMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTNYMAY-----PFIMLCMWGMIMTSSICL 277
Cdd:PRK06589 221 -IAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIfaefnWLIFIPIVSIFYSSLKAL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 278 RQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMST 357
Cdd:PRK06589 300 KTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISF 379
|
330 340 350
....*....|....*....|....*....|....*
gi 1236518669 358 WWLLASLTNLALPPSINLIGELFVTMATFSWSNVT 392
Cdd:PRK06589 380 IISISSLSLIGIPIFSGFISKFLILLAASEQNQPW 414
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
88-339 |
1.11e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 63.43 E-value: 1.11e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 88 SWTRKK--LYLSMLTSLQVILVMTFSASETILFYILFEATLIPTLIIITrWGNQTERLNAGLYFLFYTLFGSLPLLVALV 165
Cdd:PRK07234 87 CWESAKtrFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAV 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 166 YMQKSMGSLNFlmmtllfQELSISWSNNLLWLAciMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR 245
Cdd:PRK07234 166 LVYQANGTFAF-------SGLATADPEAFALIA--LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVR 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 246 ITMTLNPLTNYMAYPFIMLCMWGmimtSSICLRQTDLKSLIAYSSVSHMALVIVAILIqtpwsyvgATALMIAHGLTSSM 325
Cdd:PRK07234 237 CALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKST 304
|
250
....*....|....
gi 1236518669 326 LFCLANSNYERIHS 339
Cdd:PRK07234 305 LFLCAGALPSRNFT 318
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-387 |
1.58e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 62.83 E-value: 1.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 1 MLKLIIPTMALLVVIWCSNNSMLWINTTLYSLMISFTSLSLLNQTDN----------ISKNFSSTFFSDQLSSPLLVLTM 70
Cdd:PRK12662 7 ILQVIIPLLSAVVCALLKNRKLVKIISCIVVAVSFFIALVLFVQVYSggvikyslggWGPPYGIELRVDILSATMLVLVN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 71 WLLPLMIVASQHHlnkeswTRKKLYLSMLTSLQVILVMTFSASETIL-------FYILFEATLIPTLIIITRwGNQTERL 143
Cdd:PRK12662 87 FIAVMSVLYGIYP------NRKEISVNKIPSFYSAFLLCLGGLLGILvsndvfnIYVFLEISSISSYVLVAM-GRDKKAL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 144 NAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSISWSNNLLWLACIMAFMVKMPLYSLHLWLPKAHVEA 223
Cdd:PRK12662 160 VAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 224 PIAGSMVLAAVLLKLGGYGMMRITMT-----LNPLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVI 298
Cdd:PRK12662 240 PSFISVFFSGTSTKVMIYLIIRIVYDvfkanFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYII 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 299 VAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIGE 378
Cdd:PRK12662 320 LAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAK 399
|
....*....
gi 1236518669 379 LFVTMATFS 387
Cdd:PRK12662 400 WYILDAFIK 408
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
95-431 |
2.47e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 62.48 E-value: 2.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 95 YLSMLTSLQVILVMtfsASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSL 174
Cdd:COG1009 116 YLLLFMAAMLGLVL---SDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 175 NFlmmTLLFQELSISWSNNLLWLACIMAF---MVKMPLYSLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRitmtL 250
Cdd:COG1009 193 NF---SELLAAAPTILSSPLLTLILLLLLlgaFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLAR----L 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 251 NPLtnYMAYPFIMLCM-----WGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSYVGATALMIAHGLTSSM 325
Cdd:COG1009 265 SPL--FALSPVWLTVVaiigaITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKAL 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 326 LFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIG-ELFV--TMATFSWSNVTIILIGLNILI 402
Cdd:COG1009 340 LFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSkEAILeaALEAGGLGPLLLAVALLGAFL 419
|
330 340 350
....*....|....*....|....*....|...
gi 1236518669 403 TALYSLYML----TTTQRGKSSYHIHTLSPSLT 431
Cdd:COG1009 420 TAFYSFRLFflvfFGKPRPKTPKHPHESPWLMT 452
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
213-385 |
5.75e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 61.47 E-value: 5.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 213 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRitmtLNPLTNYMAYPFIMLCMWG---MIMTSSICLRQTDLKSLIAY 288
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 289 SSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLA 368
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170
....*....|....*..
gi 1236518669 369 LPPSINLIGELFVTMAT 385
Cdd:PRK12647 370 LPPLFGFLAKELIYEAL 386
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
156-390 |
9.04e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 60.61 E-value: 9.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 156 GSLPLLVALVYMQKSMGSLNFLMMTLLFQELSIswsNNLLWLACIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLAAVL 235
Cdd:PRK08042 146 GTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPL---GSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVV 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 236 LKLGGYGMMRITMTLNPLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALV-------IVAILIQTP-- 306
Cdd:PRK08042 223 MKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPal 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 307 --WSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPPSINLIGELFVTMA 384
Cdd:PRK08042 303 iaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQS 382
|
....*.
gi 1236518669 385 TFSWSN 390
Cdd:PRK08042 383 FFKLSN 388
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
118-371 |
1.21e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.11 E-value: 1.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 118 FYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSISWSNNLLWL 197
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALAL 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 198 AcIMAFMVKMPLYSLHLWLPKAHVEAPIAGSMVLaaVLLKLGG-YGMMRITMTL-NPLTNYMAYPFIM--LCMWGMIMTS 273
Cdd:PRK08376 226 F-IAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIyGPAINLATVGWVIiiLGCLTMFVGV 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 274 SICLRQTDLKSLIAYSSVS---HMAL---VIVAILIQTPWSYVGATAL------MIAHGLTSSMLFCLANSNYERIHSRT 341
Cdd:PRK08376 303 AMAVVQKDVKRLLAYHSVSqigYMLLglgVGLAALGDPAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYETGTRN 382
|
250 260 270
....*....|....*....|....*....|
gi 1236518669 342 MIMARGLQTLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK08376 383 LNELGGLARTMPKTTIAFLIGAAAIVGLPP 412
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
52-323 |
4.55e-09 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 58.20 E-value: 4.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 52 FSSTFFSDQLSSPLLVLTMWLLPLMIVASQHHLNKESWTRKKLYLSMLTSLQVILVMTfSASETILFYILFEATLIPTLI 131
Cdd:COG1007 62 FGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYV 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 132 IITRWGNQTERLNAGL-YFLFYTLFGSLPLL-VALVYMqkSMGSLNFLMMTLLFQELSISwsNNLLWLACIM---AFMVK 206
Cdd:COG1007 141 LVAFRRDDRRSSEAALkYFLLGALSSGFLLYgISLLYG--ATGSLNLAGIAAALAAGGAN--SPLLLLGLVLvlaGLAFK 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 207 MPLYSLHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MRITMT-LNPLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKS 284
Cdd:COG1007 217 LSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLVEaFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKR 295
|
250 260 270
....*....|....*....|....*....|....*....
gi 1236518669 285 LIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTS 323
Cdd:COG1007 296 MLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMN 334
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-408 |
1.20e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 56.88 E-value: 1.20e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 52 FSSTFFSDQLSSPLLVLTMWLLPLMIVASQHHLNKEswtRKKLYLSMLTSLQVILVM-TFSASETILFYILFEATLIPTL 130
Cdd:PRK07691 69 FGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIE---RERYYYYPSVLFMLAGVNgAFLTGDIFNLFVFFEVMLMASY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 131 IIITRWGNQTErLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSISWSN--NLLWLACIMAFMVKMP 208
Cdd:PRK07691 146 VLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGliTVVAILFLFVFATKAG 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 209 LYSLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI-TMTLNPLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIA 287
Cdd:PRK07691 225 LFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIII 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 288 YSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNL 367
Cdd:PRK07691 305 YNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLA 384
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1236518669 368 ALPPSINLIGELFVTMATFSWSNVTIILIGLNILITALYSL 408
Cdd:PRK07691 385 GIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSV 425
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-370 |
3.32e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 52.77 E-value: 3.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 95 YLSMLTSLQVILVmtfSASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSL 174
Cdd:MTH00020 116 YLSLFTFLMVVLV---TSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 175 NFlmmTLLFQELSISWSNNLLWLaCIMAF---MVKMPLYSLHLWLPKAH-----VEAPI-AGSMVLAAVLLklggygmmr 245
Cdd:MTH00020 193 DF---SSVFNMVVSAPSSDITLI-CLFLFigaVGKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVFL--------- 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 246 iTMTLNPLTNYMAYPFIMLCMWGMI---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSYVGATALMIAHGLT 322
Cdd:MTH00020 260 -LIRSSPLFEQAPLALIIVTIVGSLtvfFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFHLMNHAFF 335
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1236518669 323 SSMLFCLANSnyeRIHS----RTMIMARGLQTLLPLMSTWWLLASLTNLALP 370
Cdd:MTH00020 336 KALLFLSAGS---VIHAlsdeQDMRKMGGLISFLPLTYIFFLIGSLSLMGFP 384
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
119-408 |
5.87e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 51.87 E-value: 5.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 119 YILFEATLIPTLIIITrWGNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSISWSNNLLWLA 198
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 199 CIMAFMVKMPLYSLHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMTLNPLTNYMAYPFIMLCMWGMIMTSSI-CL 277
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALgAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 278 RQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMST 357
Cdd:PRK12663 292 AYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGA 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1236518669 358 WWLLASLTNLALPPSINLIGELFVTMATFSWSNVTIILIGLNILITALYSL 408
Cdd:PRK12663 372 LFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
112-327 |
1.74e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 50.69 E-value: 1.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 112 ASETILFYILFEATLIPTLIIItrwGNQTERLN---AGLYFLFYTLFGSLPLLVALVYMQKSMGslnflmmTLLFQELSI 188
Cdd:PRK12644 125 SDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAG-------TYRLSELLA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 189 SWSNNLL---WLACIMAFMV-KMPLYSLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITMTLNPLTNYMaYPFIM 263
Cdd:PRK12644 195 DPPTGPAvsvAVVLILVGALsKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAPGFADVPVWR-PTVLV 272
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1236518669 264 LCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLF 327
Cdd:PRK12644 273 LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
65-370 |
2.23e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 49.96 E-value: 2.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 65 LLVLTMWLLPLMIVASQHHLNKESWTRKKLYLSMLTSLQVILVmtfSASETILFYILFEATLIPTLIIITRWGNQTERLN 144
Cdd:MTH00032 86 LLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLV---TSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 145 AGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSI---SWSNNLLWLACIMAFMV-----------KMPLY 210
Cdd:MTH00032 163 AAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGGSVGSGImdrGYYGGGAYESPLAPFAIigillligcigKSAQL 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 211 SLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITmtlnPLTNYMAYPFIMLCMWGMI---MTSSICLRQTDLKSLIA 287
Cdd:MTH00032 243 GLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQNDLKKVIA 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 288 YSSVSHMALVIVAILIQTpwSYVGATALMIAHGLTSSMLFCLANSnyeRIHSRT-----MIMARGLQTLLPLMSTWWLLA 362
Cdd:MTH00032 319 YSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGS---VIHSTTvdeqdMRKMGGLIHSIPFTYTMMLIG 393
|
....*...
gi 1236518669 363 SLTNLALP 370
Cdd:MTH00032 394 SFSIMGLP 401
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-323 |
3.08e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 46.35 E-value: 3.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 1 MLKLIIPTMALLVVIWCSNNSMLWINTTLYSLMISFTSLSLLNQTDNISKNFSSTFFSDQLSSPLLVLTMWLLPLMIVAS 80
Cdd:PRK05777 14 ELILLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 81 QHHLNKESWTrkKLYLSMLTSLQVILVMTfSASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPL 160
Cdd:PRK05777 94 RPYLEDRGRG--EFYLLVLFALLGMMVMV-SANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 161 L--VALVYMqkSMGSLNFlmmTLLFQELSISWSNNLLWLACIMAFMV----KMPLYSLHLWLPKAHVEAPIAGSMVLAAV 234
Cdd:PRK05777 171 LygMSLLYG--ATGSLSF---AGIAKALADGSGNSLLLLFGLVFLLVglafKLSAVPFHMWTPDVYEGAPTPVTAFLATA 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 235 LlKLGGYGM-MRITMT-LNPLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGA 312
Cdd:PRK05777 246 P-KIAAFAVlLRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAV 324
|
330
....*....|.
gi 1236518669 313 TALMIAHGLTS 323
Cdd:PRK05777 325 LFYLLAYLFMT 335
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
172-371 |
1.09e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 44.63 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 172 GSLNFLMMTLLFQELsISWSNNLLWLACIMAFMVKM-PL-----YSLHLWLPKAhVEAPI-------AGSMVLAAVLLkl 238
Cdd:PRK07376 201 GSFDFDGIADRLSEL-VSSGAVSGWLALLLCILVFLgPMaksaqFPLHVWLPDA-MEGPTpisalihAATMVAAGVFL-- 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 239 ggygmmriTMTLNPLtnYMAYPFIMLCM-WGMIMTS----SICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSYVGAT 313
Cdd:PRK07376 277 --------VARMYPV--FEQFPAVMTVIaWTGAITAflgaSIALTQNDIKKGLAYSTISQLGYMVMAMGCG---AYSAGL 343
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1236518669 314 ALMIAHGLTSSMLFCLANS---------NYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK07376 344 FHLMTHAYFKAMLFLGSGSvihgmeevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPP 410
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
86-371 |
1.23e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 44.43 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 86 KESWTRKKLYLsmLTSLQVILVMTFSASeTILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPLLVALV 165
Cdd:PRK12649 107 KEDLPRYYQYL--LLFMGSMIGMVFSGN-TIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 166 YMQKSMGSLNFLMMTLLFQELSISWSNNLLWLACIMAFM---VKMPLYSLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGY 241
Cdd:PRK12649 184 LLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVY 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 242 GMMRItmtlNPLTNYMAYPFIMLC---MWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTP----WSYVGATA 314
Cdd:PRK12649 263 LVARI----HPIFSGTEAWFILVSgtgMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATF 338
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1236518669 315 LMIAHGLTSSMLFCLANSNYERIHSRTMIMARGLQTLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK12649 339 HLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
88-364 |
1.43e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.40 E-value: 1.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 88 SWTRKKLYLSMLTSLQVI-LVMTFSASETILFYILFEATLIPTLIIITRWGNQTErlnAGLYFLFYTLFGSLPLLVALVY 166
Cdd:PRK06459 66 EYDHYGKWLSSLYILTILgMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAW 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 167 MQKSMGSLNFLMMTLLFQELSISwsnnllwlaciMAFMVKMPLYSLHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMM 244
Cdd:PRK06459 143 AFIISGTTNFSYLPSPVPLILAS-----------FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGIL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 245 RITM-TLNPLTNYMAYPFIMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAI--------LIQTPWSYVGATAL 315
Cdd:PRK06459 212 KMTIlTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALglymvtkqLITSIEHFSLITVI 291
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1236518669 316 M--IAHGLTSSMLFC------------LANSNYERIHSRTMIMARGLQTLLPL---MSTWWLLASL 364
Cdd:PRK06459 292 LysFAHSVAKTGLFLssglqekqsitySKKIRNRWIELGLTLLASSLSGLLPNiggVASWLLLESL 357
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
111-327 |
3.14e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 42.71 E-value: 3.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 111 SASETILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELS--I 188
Cdd:MTH00196 11 SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLNSGQsfS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 189 SWSNNLLWLACIMAFMVKMPLYSLHLWLPKAHVEAPiagsMVLAAVLLKLGGYGMMRITMTLNPLTNYmaypFIMLCMWG 268
Cdd:MTH00196 91 SVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNI----LLIGGLFS 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1236518669 269 MIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLF 327
Cdd:MTH00196 163 LFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
9.19e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 41.76 E-value: 9.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 137 GNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLFQELSISwSNNLLWLACIM---AFMVKMPLYSLH 213
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAA-DRALLEAGAALllvVFLIKAAMWPLN 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 214 LWLPKAHVEA--PIAGsmvLAAVLLKLGGYGMMRITMTL-NPLTNYMAYPFIMLCMWGMIMTSSI----CLRQTDLKSLI 286
Cdd:PRK12666 231 FWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLfGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLRRLA 307
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1236518669 287 AYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLA 330
Cdd:PRK12666 308 AYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
262-371 |
3.59e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 39.63 E-value: 3.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 262 IMLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYVGATALMIAHGLTSSMLFCLANSNYERIHSRT 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110
....*....|....*....|....*....|
gi 1236518669 342 MIMARGLQTLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
187-370 |
4.64e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 39.57 E-value: 4.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 187 SISWSNNLLWLACIMAFMVKMPLYSLHLWLPKAhVEAPIAGS-------MVLAAVLLklggygMMRITMTLNPLTNYMAY 259
Cdd:MTH00208 230 SNSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLISNSPWFLSL 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 260 PFImLCMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWsyvgaTAL--MIAHGLTSSMLFCLANSnyeRI 337
Cdd:MTH00208 303 CLI-LGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPN-----LALfhICTHAFFKAMLFLCSGS---II 373
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1236518669 338 HS-------RTMimaRGLQTLLPLMSTWWLLASLTNLALP 370
Cdd:MTH00208 374 HSlnneqdlRKM---GGLSFLLPVTSSCIILGSLALMGTP 410
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
131-301 |
4.68e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 39.55 E-value: 4.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 131 IIITRWGNQTERLNAGLYFLFYTLFGSLPLLVALVYMQKSMGSLNFLMMTLLfqelsiSWSNNLLWLACIMAFMVKMPLY 210
Cdd:MTH00211 148 LLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFIL------NLDLTLFLLGLLLAAMGKSAQF 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518669 211 SLHLWLPKAhVEAPIAGS-------MVLAAVLLklggygMMRitmtLNPLTNYMAYPFIMLCMWG---MIMTSSICLRQT 280
Cdd:MTH00211 222 GFHPWLPSA-MEGPTPVSallhsstMVVAGVFL------LIR----LSPLFQNNQLILGAVLLLGaltMLFGALCALTQN 290
|
170 180
....*....|....*....|.
gi 1236518669 281 DLKSLIAYSSVSHMALVIVAI 301
Cdd:MTH00211 291 DIKKIVAFSTTSQLGLMMVTL 311
|
|
| |
