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Conserved domains on  [gi|1631914332|ref|YP_009592272|]
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transcriptional regulator [Bacillus phage Taylor]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
HTH_8 super family cl22895
Bacterial regulatory protein, Fis family;
26-78 7.39e-04

Bacterial regulatory protein, Fis family;


The actual alignment was detected with superfamily member PRK00430:

Pssm-ID: 451442 [Multi-domain]  Cd Length: 95  Bit Score: 35.81  E-value: 7.39e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1631914332  26 VLGEMPAiyensyknPLLLAYMYYTEGLSTiEMANMLGCEQRTIRRYMNKYGL 78
Cdd:PRK00430   51 VLAEVEA--------PLLDMVMQYTRGNQT-RAALMLGINRGTLRKKLKKYGM 94
 
Name Accession Description Interval E-value
fis PRK00430
DNA-binding transcriptional regulator Fis;
26-78 7.39e-04

DNA-binding transcriptional regulator Fis;


Pssm-ID: 179020 [Multi-domain]  Cd Length: 95  Bit Score: 35.81  E-value: 7.39e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1631914332  26 VLGEMPAiyensyknPLLLAYMYYTEGLSTiEMANMLGCEQRTIRRYMNKYGL 78
Cdd:PRK00430   51 VLAEVEA--------PLLDMVMQYTRGNQT-RAALMLGINRGTLRKKLKKYGM 94
transpos_IS630 NF033545
IS630 family transposase;
42-76 8.46e-03

IS630 family transposase;


Pssm-ID: 468076 [Multi-domain]  Cd Length: 298  Bit Score: 34.15  E-value: 8.46e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1631914332  42 LLLAYMYYTEGLSTIEMANMLGCEQRTIRRYMNKY 76
Cdd:NF033545    2 RARILLLAAEGLSITEIAERLGVSRSTVYRWLKRF 36
 
Name Accession Description Interval E-value
fis PRK00430
DNA-binding transcriptional regulator Fis;
26-78 7.39e-04

DNA-binding transcriptional regulator Fis;


Pssm-ID: 179020 [Multi-domain]  Cd Length: 95  Bit Score: 35.81  E-value: 7.39e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1631914332  26 VLGEMPAiyensyknPLLLAYMYYTEGLSTiEMANMLGCEQRTIRRYMNKYGL 78
Cdd:PRK00430   51 VLAEVEA--------PLLDMVMQYTRGNQT-RAALMLGINRGTLRKKLKKYGM 94
transpos_IS630 NF033545
IS630 family transposase;
42-76 8.46e-03

IS630 family transposase;


Pssm-ID: 468076 [Multi-domain]  Cd Length: 298  Bit Score: 34.15  E-value: 8.46e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1631914332  42 LLLAYMYYTEGLSTIEMANMLGCEQRTIRRYMNKY 76
Cdd:NF033545    2 RARILLLAAEGLSITEIAERLGVSRSTVYRWLKRF 36
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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