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Conserved domains on  [gi|1824669218|ref|YP_009740653|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Heteropternis respondens]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 4.27e-142

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 403.00  E-value: 4.27e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   5 LFMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  85 LMISLFIWIIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMIN 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 165 SFNLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLF 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669218 245 SLVFLGGDFYSFVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGLKVLI 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 4.27e-142

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 403.00  E-value: 4.27e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   5 LFMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  85 LMISLFIWIIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMIN 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 165 SFNLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLF 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669218 245 SLVFLGGDFYSFVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGLKVLI 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-302 7.65e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 277.82  E-value: 7.65e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  13 LLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFNLMISLFIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  93 IIFPY--VTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMINSFNLYS 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 171 FMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLFSLVFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1824669218 251 G------DFYSFVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFF 302
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-310 5.21e-88

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 266.23  E-value: 5.21e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   4 DLFMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  84 NLMISLFIWIIFPY--VTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIV 161
Cdd:COG1005    87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 162 MINSFNLYSFMNFQ-LYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 241 SMLFSLVFLGG--------DFYS----FVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGLKV 308
Cdd:COG1005   247 SALATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVL 326


                  ..
gi 1824669218 309 LI 310
Cdd:COG1005   327 LF 328
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
13-306 8.28e-43

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 150.24  E-value: 8.28e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  13 LLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFnLMISLFI- 91
Cdd:NF040610   17 LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIV-AMGSVFLm 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  92 -------WIIFPYVTY---MCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIV 161
Cdd:NF040610   96 lvaipfgAVIINGVEYplvVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAI 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 162 MINSFNLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMS 241
Cdd:NF040610  176 MAGSLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGS 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 242 MLFSLVFLGG-------------DFYS--FVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGL 306
Cdd:NF040610  256 FLVVLLFLGGwnlpgfvtdipvlGIILptLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIAL 335
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 4.27e-142

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 403.00  E-value: 4.27e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   5 LFMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  85 LMISLFIWIIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMIN 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 165 SFNLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLF 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669218 245 SLVFLGGDFYSFVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGLKVLI 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 7-307 8.20e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 348.95  E-value: 8.20e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   7 MFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFNLM 86
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  87 ISLFIWIIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMINSF 166
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 167 NLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLFSL 246
Cdd:MTH00225  162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1824669218 247 VFLGGDFYSFVFF--IKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGLK 307
Cdd:MTH00225  242 LFFGGFFVTIDLFliLKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIIL 304
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-306 2.32e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 332.61  E-value: 2.32e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   6 FMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFNL 85
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  86 MISLFIWIIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMINS 165
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 166 FNLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLFS 245
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669218 246 LVFLGGDF-----YSFVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGL 306
Cdd:MTH00143  241 VLFFGGSSvlfllGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 9-306 8.90e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 300.67  E-value: 8.90e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   9 ILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFNLMIS 88
Cdd:MTH00218    5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  89 LFIWIIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMINSFNL 168
Cdd:MTH00218   85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 169 YSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLFSLVF 248
Cdd:MTH00218  165 EGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1824669218 249 LGGDFYSFVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGL 306
Cdd:MTH00218  245 LGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSL 302
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-313 1.19e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 300.77  E-value: 1.19e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   7 MFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFNLM 86
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  87 ISLFIWIIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMINSF 166
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 167 NLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLFSL 246
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1824669218 247 VFLGG-------DFYSFVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGLKVLIISF 313
Cdd:MTH00104  241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-306 1.88e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 298.07  E-value: 1.88e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   5 LFMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFN 84
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  85 LMISLFIWIIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMIN 164
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 165 SFNLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLF 244
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1824669218 245 SLVFLGGDFY-------SFVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGL 306
Cdd:MTH00071  244 TILFLGSTYNhlqpelsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISL 312
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 5-306 1.55e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 295.65  E-value: 1.55e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   5 LFMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFN 84
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  85 LMISLFIWIIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMIN 164
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 165 SFNLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLF 244
Cdd:MTH00111  164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1824669218 245 SLVFL-------GGDFYSFVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGL 306
Cdd:MTH00111  244 TILFLnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSM 312
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 5-310 2.10e-98

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 292.03  E-value: 2.10e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   5 LFMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFN 84
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  85 LMISLFIWIIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMIN 164
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 165 SFNLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLF 244
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669218 245 SLVFLGGDfYSFVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGLKVLI 310
Cdd:MTH00195  241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-308 1.60e-95

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 285.35  E-value: 1.60e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   1 MLYDLFMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFS 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  81 PIFNLMISLFIWIIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 161 VMINSFNLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824669218 241 SMLFSLVFLGGDFY-------SFVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGLKV 308
Cdd:MTH00134  241 NTLSAILFLGASHIptlpeltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPI 315
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-310 1.17e-94

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 283.02  E-value: 1.17e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   3 YDLFMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPI 82
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  83 FNLMISLFIWIIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVM 162
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 163 INSFNLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSM 242
Cdd:MTH00040  161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669218 243 LFSLVFLGGDFYSFVFF--------IKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGLKVLI 310
Cdd:MTH00040  241 LSVILFLGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NADHdh pfam00146
NADH dehydrogenase;
13-302 7.65e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 277.82  E-value: 7.65e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  13 LLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFNLMISLFIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  93 IIFPY--VTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMINSFNLYS 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 171 FMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLFSLVFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1824669218 251 G------DFYSFVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFF 302
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-311 1.02e-88

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 267.80  E-value: 1.02e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   8 FILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFNLMI 87
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  88 SLFIWIIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMINSFN 167
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 168 LYSFMNFQlYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLFSLV 247
Cdd:MTH00010  165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1824669218 248 FLGGDFYSF----VFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGLKVLII 311
Cdd:MTH00010  244 FTSFIPSIFisdlMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-310 5.21e-88

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 266.23  E-value: 5.21e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   4 DLFMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  84 NLMISLFIWIIFPY--VTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIV 161
Cdd:COG1005    87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 162 MINSFNLYSFMNFQ-LYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 241 SMLFSLVFLGG--------DFYS----FVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGLKV 308
Cdd:COG1005   247 SALATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVL 326


                  ..
gi 1824669218 309 LI 310
Cdd:COG1005   327 LF 328
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-306 9.47e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 258.13  E-value: 9.47e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   1 MLYDLFMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFS 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  81 PIFNLMISLFIWIIFPYV--TYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 159 LIVMINSFNLYSFMNFQL-YCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669218 238 IFMSMLFSLVFLGG--------DFYSFVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGL 306
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 5-306 1.57e-83

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 255.04  E-value: 1.57e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   5 LFMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFN 84
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  85 LMISLFIWIIFPYVT--YMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVM 162
Cdd:MTH00054   81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 163 INSFNLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSM 242
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1824669218 243 LFSLVFLGGDFYSFV----------FFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGL 306
Cdd:MTH00054  241 FGVILFLGGWLVISGptsyfsnfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGI 314
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 1.21e-80

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 247.41  E-value: 1.21e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   5 LFMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFN 84
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  85 LMISLFIWIIFPYVTY--MCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVM 162
Cdd:PRK06076   89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 163 INSFNLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSM 242
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824669218 243 LFSLVFLGG----------DFYSFVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSL 297
Cdd:PRK06076  249 LITTLFLGGwlppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 2-306 4.13e-68

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 216.04  E-value: 4.13e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   2 LYDLFMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSP 81
Cdd:MTH00029    3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  82 IFNLMISLFIWII--FPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 159
Cdd:MTH00029   83 IISFTLAILAWAIvtMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISV 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 160 IVMINSFNLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIF 239
Cdd:MTH00029  163 ILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIIL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 240 MSMLFSLVFLGG-----------------------DFYSFVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLS 296
Cdd:MTH00029  243 MSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLS 322

                         330
                  ....*....|
gi 1824669218 297 LNFLFFFIGL 306
Cdd:MTH00029  323 LGLVILTAGI 332
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-308 3.05e-60

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 193.96  E-value: 3.05e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  11 NFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFNLMISLF 90
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  91 IWIIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMINSFNLYS 170
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 171 FMNFQLYCWFIIFSFplalsffgSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLFSLVFLg 250
Cdd:MTH00090  161 SFSLSLFVIYLPFLI--------MIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF- 231

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1824669218 251 gDFYSFVFFIKLSfvsfMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGLKV 308
Cdd:MTH00090  232 -KFSFLMLFLIFS----LLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 6-304 1.08e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 167.02  E-value: 1.08e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   6 FMFILNFLLLIICVLIsVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFNL 85
Cdd:MTH00058    2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  86 MISLFIWIIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMINS 165
Cdd:MTH00058   81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 166 FNLYSFMnfqLYCWFIIFSFPLALSFFGSC-LAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLF 244
Cdd:MTH00058  161 YSLVDFY---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLG 237

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 245 SLVFLGGDFYSFVFFIKLsfvsFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFI 304
Cdd:MTH00058  238 SVLFFGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
13-306 8.28e-43

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 150.24  E-value: 8.28e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  13 LLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPIFnLMISLFI- 91
Cdd:NF040610   17 LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIV-AMGSVFLm 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  92 -------WIIFPYVTY---MCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIV 161
Cdd:NF040610   96 lvaipfgAVIINGVEYplvVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAI 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 162 MINSFNLYSFMNFQLYCWFIIFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMS 241
Cdd:NF040610  176 MAGSLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGS 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 242 MLFSLVFLGG-------------DFYS--FVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFIGL 306
Cdd:NF040610  256 FLVVLLFLGGwnlpgfvtdipvlGIILptLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIAL 335
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-297 8.71e-31

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 118.90  E-value: 8.71e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   2 LYDLFMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSP 81
Cdd:CHL00032   23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  82 IFnLMISLFIW---IIFPYVTYMCSFSYGFLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:CHL00032  103 SI-AVISILLSylvIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 159 LIVMINSFNL---------YSFMNFQLYCWFIIFsfplaLSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLI 229
Cdd:CHL00032  182 ISLLSNSLSTvdiveaqskYGFWGWNLWRQPIGF-----IVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLF 256

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 230 FLAEYTSIIFMSMLFSLVFLGG-----------DFYS--------------FVFFIKLSFVSFMFIWVRGTLPRFRYDKL 284
Cdd:CHL00032  257 YVASYLNLLVSSLFVTVLYLGGwnlsipyifipELFEinktggvfgttigiFITLAKTYLFLFISITTRWTLPRLRMDQL 336

                         330
                  ....*....|...
gi 1824669218 285 MYLAWSSYLPLSL 297
Cdd:CHL00032  337 LNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-304 6.75e-23

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 96.02  E-value: 6.75e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218   6 FMFILNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPnkvgflGIPQPFSDAIKLICKEQPIPfMSNYFLYYFSPIFNL 85
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVP-ETASWLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218  86 MISLFIWIIFPYVTYMCSFSYG--FLFFLCCTSLGVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIVMI 163
Cdd:COG0650    74 AAMLLAALLVPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 164 NSFNLYSFMNFQLYCWFIIFSFPL---ALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:COG0650   154 GSTSLSDIVAYQAAHGPLLLSPSLllaAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669218 241 SMLFSLVFLGGDFYS------FVFFIKLSFVSFMFIWVRGTLPRFRYDKLMYLAWSSYLPLSLNFLFFFI 304
Cdd:COG0650   234 LSLFVNLFLPWGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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